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    <entry>
        <source releaseDate="2017-08-31+01:00">
            <names>
                <shortLabel>DIP</shortLabel>
                <fullName>Database of Interacting Proteins</fullName>
            </names>
            <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0465" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1579232" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14681454" refType="primary-reference" refTypeAc="MI:0358"/>
            </xref>
            <attributeList>
                <attribute name="postaladdress">611 Young Drive East; Los Angeles CA 90095; USA</attribute>
                <attribute name="url" nameAc="MI:0614">http://dip.doe-mbi.ucla.edu/</attribute>
                <attribute name="contact-email" nameAc="MI:0634">dip@mbi.ucla.edu</attribute>
                <attribute name="postalAddress">611 Young Drive East; Los Angeles CA 90095; USA</attribute>
                <attribute name="url">http://dip.doe-mbi.ucla.edu/</attribute>
            </attributeList>
        </source>
        <experimentList>
            <experimentDescription id="3171530">
                <names>
                    <shortLabel>murakami-2008-10</shortLabel>
                </names>
                <bibref>
                    <xref>
                        <primaryRef db="pubmed" dbAc="MI:0446" id="18480818" refType="primary-reference" refTypeAc="MI:0358"/>
                    </xref>
                </bibref>
                <xref>
                    <primaryRef db="dip" dbAc="MI:0465" id="DIP-259403X" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="imex" dbAc="MI:0670" id="IM-21988" refType="imex-primary" refTypeAc="MI:0662"/>
                    <secondaryRef db="wwpdb" dbAc="MI:0805" id="2Z73" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="intact" dbAc="MI:0469" id="EBI-15702494" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="doi" dbAc="MI:0574" id="10.1038/nature06925" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
                <hostOrganismList>
                    <hostOrganism ncbiTaxId="6637">
                        <names>
                            <shortLabel>ommastrephes pacificus</shortLabel>
                            <fullName>Todarodes pacificus (Japanese flying squid)</fullName>
                            <alias typeAc="MI:1041" type="synonym">Japanese flying squid</alias>
                            <alias typeAc="MI:1041" type="synonym">Ommastrephes pacificus</alias>
                        </names>
                    </hostOrganism>
                </hostOrganismList>
                <interactionDetectionMethod>
                    <names>
                        <shortLabel>x-ray diffraction</shortLabel>
                        <fullName>x-ray crystallography</fullName>
                        <alias typeAc="MI:0303" type="go synonym">X-ray</alias>
                        <alias typeAc="MI:1041" type="synonym">X-ray</alias>
                        <alias typeAc="MI:1041" type="synonym">x-ray diffraction</alias>
                    </names>
                    <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0114" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1272" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                    </xref>
                </interactionDetectionMethod>
                <participantIdentificationMethod>
                    <names>
                        <shortLabel>predetermined</shortLabel>
                        <fullName>predetermined participant</fullName>
                        <alias typeAc="MI:1041" type="synonym">predetermined</alias>
                    </names>
                    <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1465" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                    </xref>
                </participantIdentificationMethod>
                <attributeList>
                    <attribute name="author-list" nameAc="MI:0636">Murakami M., Kouyama T.</attribute>
                    <attribute name="comment" nameAc="MI:0612">DIP original experiment: DIP-259403X</attribute>
                    <attribute name="journal" nameAc="MI:0885">Nature</attribute>
                    <attribute name="publication year" nameAc="MI:0886">2008</attribute>
                    <attribute name="curation depth" nameAc="MI:0955">IMEx</attribute>
                    <attribute name="title" nameAc="MI:1091">Crystal structure of squid rhodopsin.</attribute>
                    <attribute name="author-list" nameAc="MI:0636">Murakami M.,  Kouyama T.</attribute>
                    <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
                    <attribute name="imex curation" nameAc="MI:0959"/>
                    <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
                </attributeList>
            </experimentDescription>
        </experimentList>
        <interactorList>
            <interactor id="3171531">
                <names>
                    <shortLabel>opsd_todpa</shortLabel>
                    <fullName>Rhodopsin</fullName>
                    <alias typeAc="MI:0301" type="gene name">RHO</alias>
                </names>
                <xref>
                    <primaryRef db="uniprotkb" dbAc="MI:0486" id="P31356" version="76" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0009881" secondary="photoreceptor activity" version="SP_102"/>
                    <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3AYN" version="SP_102"/>
                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0007602" secondary="phototransduction" version="SP_102"/>
                    <secondaryRef db="dip" dbAc="MI:0465" id="DIP-60624N"/>
                    <secondaryRef db="interpro" dbAc="MI:0449" id="IPR027430" version="SP_102"/>
                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0007601" secondary="visual perception" version="SP_102"/>
                    <secondaryRef db="interpro" dbAc="MI:0449" id="IPR017452" version="SP_102"/>
                    <secondaryRef db="interpro" dbAc="MI:0449" id="IPR006031" version="SP_102"/>
                    <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4WW3" version="SP_102"/>
                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0016021" secondary="integral component of membrane" version="SP_102"/>
                    <secondaryRef db="interpro" dbAc="MI:0449" id="IPR001760" version="SP_102"/>
                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0016918" secondary="retinal binding" version="SP_102"/>
                    <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3AYM" version="SP_102"/>
                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0005886" secondary="plasma membrane" version="SP_102"/>
                    <secondaryRef db="interpro" dbAc="MI:0449" id="IPR000276" version="SP_102"/>
                    <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2ZIY" version="SP_102"/>
                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0004930" secondary="G protein-coupled receptor activity" version="SP_102"/>
                    <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2Z73" version="SP_102"/>
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                    <secondaryRef db="go" dbAc="MI:0448" id="GO:0018298" secondary="protein-chromophore linkage" version="SP_102"/>
                </xref>
                <interactorType>
                    <names>
                        <shortLabel>protein</shortLabel>
                        <fullName>protein</fullName>
                    </names>
                    <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
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                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
                    </xref>
                </interactorType>
                <organism ncbiTaxId="6637">
                    <names>
                        <shortLabel>ommastrephes pacificus</shortLabel>
                        <fullName>Todarodes pacificus (Japanese flying squid)</fullName>
                        <alias typeAc="MI:1041" type="synonym">Japanese flying squid</alias>
                        <alias typeAc="MI:1041" type="synonym">Ommastrephes pacificus</alias>
                    </names>
                </organism>
                <sequence>MGRDLRDNETWWYNPSIVVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQQAAYPPQGYAPPPQGYPPQGYPPQGYPPQGYPPQGYPPPPQGAPPQGAPPAAPPQGVDNQAYQA</sequence>
            </interactor>
        </interactorList>
        <interactionList>
            <interaction imexId="IM-21988-1" id="3171532">
                <names>
                    <shortLabel>rho-19</shortLabel>
                </names>
                <xref>
                    <primaryRef db="dip" dbAc="MI:0465" id="DIP-195715E" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="psi-mi" dbAc="MI:0488" id="MI:0465" refType="imex source"/>
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                    <secondaryRef db="imex" dbAc="MI:0670" id="IM-21988-1" refType="imex-primary" refTypeAc="MI:0662"/>
                </xref>
                <experimentList>
                    <experimentRef>3171530</experimentRef>
                </experimentList>
                <participantList>
                    <participant id="3171533">
                        <names>
                            <shortLabel>N/A</shortLabel>
                        </names>
                        <xref>
                            <primaryRef db="intact" dbAc="MI:0469" id="EBI-15702532" refType="identity" refTypeAc="MI:0356"/>
                        </xref>
                        <interactorRef>3171531</interactorRef>
                        <biologicalRole>
                            <names>
                                <shortLabel>unspecified role</shortLabel>
                                <fullName>unspecified role</fullName>
                            </names>
                            <xref>
                                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                            </xref>
                        </biologicalRole>
                        <experimentalRoleList>
                            <experimentalRole>
                                <names>
                                    <shortLabel>unspecified role</shortLabel>
                                    <fullName>unspecified role</fullName>
                                </names>
                                <xref>
                                    <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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                                </xref>
                            </experimentalRole>
                        </experimentalRoleList>
                        <hostOrganismList>
                            <hostOrganism ncbiTaxId="6637">
                                <names>
                                    <shortLabel>ommastrephes pacificus</shortLabel>
                                    <fullName>Todarodes pacificus (Japanese flying squid)</fullName>
                                    <alias typeAc="MI:1041" type="synonym">Japanese flying squid</alias>
                                    <alias typeAc="MI:1041" type="synonym">Ommastrephes pacificus</alias>
                                </names>
                            </hostOrganism>
                        </hostOrganismList>
                    </participant>
                </participantList>
                <interactionType>
                    <names>
                        <shortLabel>direct interaction</shortLabel>
                        <fullName>direct interaction</fullName>
                    </names>
                    <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
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                    </xref>
                </interactionType>
                <modelled>false</modelled>
                <intraMolecular>false</intraMolecular>
                <negative>false</negative>
            </interaction>
        </interactionList>
    </entry>
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