DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ ramadan-2007-1 in vitro In vitro anti bait coip anti bait coimmunoprecipitation anti bait coip anti tag western anti tag western blot anti tag western Ramadan K., Bruderer R., Spiga FM., Popp O., Baur T., Gotta M., Meyer HH. DIP original experiment: DIP-253800X Nature 2007 IMEx Cdc48/p97 promotes reformation of the nucleus by extracting the kinase Aurora B from chromatin. Ramadan K., Bruderer R., Spiga FM., Popp O., Baur T., Gotta M., Meyer HH. Only protein-protein interactions imex curation ramadan-2007-2 in vitro In vitro anti bait coip anti bait coimmunoprecipitation anti bait coip anti tag western anti tag western blot anti tag western Ramadan K., Bruderer R., Spiga FM., Popp O., Baur T., Gotta M., Meyer HH. DIP original experiment: DIP-253801X Nature 2007 IMEx Cdc48/p97 promotes reformation of the nucleus by extracting the kinase Aurora B from chromatin. Ramadan K., Bruderer R., Spiga FM., Popp O., Baur T., Gotta M., Meyer HH. Only protein-protein interactions imex curation ubiqp_xenla Polyubiquitin protein protein xenla Xenopus laevis (African clawed frog) African clawed frog QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG q6p704_xenla ufd1.S MGC68571 ufd1 ufd1l XELAEV_18010539mg protein protein xenla Xenopus laevis (African clawed frog) African clawed frog MFSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLLQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERHTQQEEPTENEPDHSEYAVDLGFRAFTGSGNRLDGKKKGIDPSPSPLKPEDIRRGIPNYDFKIGTITFIRNSRPQAKKVEEDDALSRFIAFSGEGQSLRKKGRKP tera_xenla Transitional endoplasmic reticulum ATPase vcp 15S Mg(2+)-ATPase p97 subunit Valosin-containing protein protein protein xenla Xenopus laevis (African clawed frog) African clawed frog MASGSDTKSDDLSTAILKQKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPAGGQSGAGPSPGAGGGSGGGHFTEEDDDLYG q7szt9_xenla nploc4.S npl4 nploc4 XELAEV_18046467mg protein protein xenla Xenopus laevis (African clawed frog) African clawed frog MSESIIIRIQSPDGIKRINASKRETAATFLKKVAKEFGFRNNGFSVYVNRNRTGEISASQNKSLHFLKIKHGDMLFLFPSSSAGPSTEVMDISAAVPGSRPISSPQVVDDEIDQYLSKQDGKIYRNRDPQLCRHGPMGKCVHCVPLEPFDEDYLNHLDPPVKHMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHPPWPEGICTKCQPSAITLNRQKYRHVDNIMFENHTIADRFLDFWRKTGNQRIGYLYGRYTEHKDIPLGLRAEVAAIYEPPQIGTQNSLQLLDDPKAKVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSAEECITAGYFQNKYPNLCRLSPDAHFGSKFVTVVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCRDAPELGYAKESSSEQYVPDVFYKDIDKFGNEITQLARPLPVEYLIIDITTTFPKDPVYTFSTSSNLFPIENRDVLGETQDFHSLATYLSQNLSSVFLEIISDFHLLLFLVTNDVMSLQDSISLLLDAVRTRNEELAQTWKKSEQWATIEQLCSTVGLQPSELHDYGAIGGASHAASSSMWSCVHCTFMNQAGTDHCEMCRLPHT ufd1l-nploc4-8 3165806 N/A 3165808 unspecified role unspecified role prey prey HA-tag HA-tag ha tag ha tag YPYDVPDYA epitope tag YPYDVPDYA epitope tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range false ecolx Escherichia coli N/A 3165809 unspecified role unspecified role bait bait xenla Xenopus laevis (African clawed frog) African clawed frog N/A 3165810 unspecified role unspecified role prey prey xenla Xenopus laevis (African clawed frog) African clawed frog N/A 3165811 unspecified role unspecified role prey prey xenla Xenopus laevis (African clawed frog) African clawed frog association association false false false ufd1l-ubiqp_xenla-1 3165807 N/A 3165808 unspecified role unspecified role prey prey HA-tag HA-tag ha tag ha tag YPYDVPDYA epitope tag YPYDVPDYA epitope tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range false ecolx Escherichia coli N/A 3165809 unspecified role unspecified role bait bait xenla Xenopus laevis (African clawed frog) African clawed frog physical association physical association false false false