DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ ye-2006-3 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Ye Q., Krug RM., Tao YJ. DIP original experiment: DIP-254023X Nature 2006 IMEx The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA. Ye Q., Krug RM., Tao YJ. Only protein-protein interactions imex curation ye-2006-4 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Ye Q., Krug RM., Tao YJ. DIP original experiment: DIP-254020X Nature 2006 IMEx The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA. Ye Q., Krug RM., Tao YJ. Only protein-protein interactions imex curation ye-2006-5 ecolx Escherichia coli tem transmission electron microscopy tem predetermined predetermined participant predetermined Ye Q., Krug RM., Tao YJ. DIP original experiment: DIP-254021X Nature 2006 IMEx The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA. Ye Q., Krug RM., Tao YJ. Only protein-protein interactions imex curation ye-2006-6 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Ye Q., Krug RM., Tao YJ. DIP original experiment: DIP-254022X Nature 2006 IMEx The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA. Ye Q., Krug RM., Tao YJ. Only protein-protein interactions imex curation q77md2_9infa Nucleoprotein Nucleocapsid protein NP np protein protein influenza a virus (a/hong kong/1074/1999(h9n2)) influenza a virus (a/hong kong/1074/1999(h9n2)) MASQGTKRSYEQMETGGERQNATEIRASVGRMVGGIGRFYVQMCTELKLSDQEGRLIQNSITIERMVLSAFDERRNRYLEEHPSAGKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRGDNGRRTRIAYERMCNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERSTIMAAFKGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEYDN D13DCD2F5DD9868D q1k9h2_i33a0 Nucleoprotein Nucleocapsid protein NP protein protein i33a0 Influenza A virus (strain A/Wilson-Smith/1933 H1N1) Influenza A virus (strain A/WS/1933 H1N1) MATKGTKRSYEQMETDGERQNATEIRASVGKMIDGIGRFYIQMCTELKLSDYEGRLIQNSLTIERMVLSAFDERRNKYLEEHPSAGKDPKKTGGPIYRRVDGKWRRELILYDKEEIRRIWRQANNGDDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQRTMVDQVRESRNPGNAEFEDLIFLARSALILRGSVAHKSCLPACVYGSAVASGYDFEREGYSLVGIDPFRLLQNSQVYSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTKVVPRGKLSTRGVQIASNENMETMESSTLELRSRYWAIRTRSGGNTNQQRASSGQISIQPTFSVQRNLPFDRPTIMAAFTGNTEGRTSDMRTEIIRLMESARPEDVSFQGRGVFELSDEKATSPIVPSFDMSNEGSYFFGDNAEEYDN np_hk99-1 3151105 N/A 3151109 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false np-1 3151106 N/A 3151110 unspecified role unspecified role unspecified role unspecified role Q1K9H2:p.Arg416Ala R416A mutation disrupting strength mutation disrupting interaction strength mutation disrupting strength alanine scanning alanine scanning certain certain sequence position certain certain certain sequence position certain false Q1K9H2:p.Glu339Ala E339A mutation disrupting strength mutation disrupting interaction strength mutation disrupting strength alanine scanning alanine scanning certain certain sequence position certain certain certain sequence position certain false Region 402-428 Region 402-428 required to bind necessary binding region required to bind deletion analysis deletion analysis certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false np-2 3151107 N/A 3151110 unspecified role unspecified role unspecified role unspecified role Q1K9H2:p.Arg416Ala R416A mutation disrupting strength mutation disrupting interaction strength mutation disrupting strength alanine scanning alanine scanning certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false np-3 3151108 N/A 3151110 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false