DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ haruta-2006-1 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66527X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-2 ecolx Escherichia coli ion exchange chrom ion exchange chromatography IEC IEC ion exchange chrom predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66528X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-3 ecolx Escherichia coli solution sedimentati cosedimentation in solution solution sedimentati predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66529X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-4 ecolx Escherichia coli coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66530X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-5 ecolx Escherichia coli coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66531X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-6 in vitro In vitro coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66532X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-7 in vitro In vitro coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66533X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-8 in vitro In vitro coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66534X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-9 in vitro In vitro coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66535X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-10 in vitro In vitro coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66536X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-11 in vitro In vitro coip coimmunoprecipitation co-immunoprecipitation CoIp immunoprecipitation Co-IP co-immunoprecipitation CoIp immunoprecipitation Co-IP coip predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66537X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-12 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66538X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation haruta-2006-13 ecolx Escherichia coli ion exchange chrom ion exchange chromatography IEC IEC ion exchange chrom predetermined predetermined participant predetermined Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. DIP original experiment: DIP-66539X Nature structural & molecular biology 2006 IMEx The Swi5-Sfr1 complex stimulates Rhp51/Rad51- and Dmc1-mediated DNA strand exchange in vitro. Haruta N., Kurokawa Y., Murayama Y., Akamatsu Y., Unzai S., Tsutsui Y., Iwasaki H. Only protein-protein interactions imex curation sfr1_schpo Swi5-dependent recombination DNA repair protein 1 sfr1 dds20 SPBC28F2.07 DNA repair protein dds20 Meiotically up-regulated gene 13 protein mug13 protein protein schpo Schizosaccharomyces pombe (strain ATCC 38366 / 972) Fission yeast MSQTINSELNENATSQCKEDLKVSLSESDLRDSQGQLGIENPPKCNNSGNHSDNLGFIEQSETVHPENEKALTPDLRDTKIHTSLPITTPFSKKRAREAKNILLKPFKSPLRQTASPQVADTNLKPSLAVTNLNSDETNTSSEPVTSPLRTTPNSIKRQKRLFKSPISNCLNPKSDPEITQLLSRRLKLEKEVRNLQEQLITAETARKVEAKNEDKDLQTLIQKWKNAAQQAAEVLFKPMAERIRLAGGVTQSFRIEEGENKGQIQEVRTEFTMSMFLNQFGVPVHLMSFDEENGDWKS EFE91ABDE965C82D swi5_schpo Mating-type switching protein swi5 swi5 SPBC409.03 DNA repair protein swi5 protein protein schpo Schizosaccharomyces pombe (strain ATCC 38366 / 972) Fission yeast MEKSQLESRVHLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLLHTYNEIRDIALGMIGKVAEHEKCTSVELFDRFGVNGSE DAA84500D8A84B71 rad51_schpo DNA repair protein rhp51 rhp51 rad51 SPAC644.14c RAD51 homolog protein protein schpo Schizosaccharomyces pombe (strain ATCC 38366 / 972) Fission yeast MADTEVEMQVSAADTNNNENGQAQSNYEYDVNVQDEEDEAAAGPMPLQMLEGNGITASDIKKIHEAGYYTVESIAYTPKRQLLLIKGISEAKADKLLGEASKLVPMGFTTATEYHIRRSELITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVADRYGLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFSLLVVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVAQVDGISFNPDPKKPIGGNILAHSSTTRLSLRKGRGEQRICKIYDSPCLPESEAIFAINSDGVGDPKEIIAPV 9F26EB9FA4F3C2BA dmc1_schpo Meiotic recombination protein dmc1 dmc1 dmp1 SPAC8E11.03c protein protein schpo Schizosaccharomyces pombe (strain ATCC 38366 / 972) Fission yeast MEEFAEGNDDEQMIFSDIEDLTAHGIGMTDIIKLKQAGVCTVQGVHMSTKRFLLKIKGFSEAKVDKLKEAASKMCPANFSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAAMMFASNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEAECSYVITPGGIADVS 86B73EAA491F7B02 rfa1_schpo Replication factor A protein 1 ssb1 rad11 rpa1 SPBC660.13c Single-stranded DNA-binding protein p68 subunit protein protein schpo Schizosaccharomyces pombe (strain ATCC 38366 / 972) Fission yeast MAERLSVGALRIINTSDASSFPPNPILQVLTVKELNSNPTSGAPKRYRVVLSDSINYAQSMLSTQLNHLVAENKLQKGAFVQLTQFTVNVMKERKILIVLGLNVLTELGVMDKIGNPAGLETVDALRQQQNEQNNASAPRTGISTSTNSFYGNNAAATAPAPPPMMKKPAAPNSLSTIIYPIEGLSPYQNKWTIRARVTNKSEVKHWHNQRGEGKLFSVNLLDESGEIRATGFNDQVDAFYDILQEGSVYYISRCRVNIAKKQYTNVQNEYELMFERDTEIRKAEDQTAVPVAKFSFVSLQEVGDVAKDAVIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQTGYEMRVTLWGKTAIEFSVSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDIQESHLLKGWYDGQGRGQEFAKHSVISSTLSTTGRSAERKNIAEVQAEHLGMSETPDYFSLKGTIVYIRKKNVSYPACPAADCNKKVFDQGGSWRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKTADELNDLQENDENAFMNCMAEACYMPYIFQCRAKQDNFKGEMRVRYTVMSINQMDWKEESKRLINFIESAQ 5F2E77A0E12022EA rfa3_schpo Replication factor A protein 3 ssb3 Single-stranded DNA-binding protein P12 subunit SPCC23B6.05c protein protein schpo Schizosaccharomyces pombe (strain ATCC 38366 / 972) Fission yeast MERPTPRVTKDMLPECSGKTVRIVGKANQVEGETAKVDSNGSFDMHLTVDNTLEPNHFYEFVVSVKPDSSVQLLTCVDFGTDIDMEVYQKLVLFSHKYNSLFFE 377BCF913652F1AE rfa2_schpo Replication factor A protein 2 ssb2 Single-stranded DNA-binding protein P30 subunit SPCC1753.01c SPCC584.06c protein protein schpo Schizosaccharomyces pombe (strain ATCC 38366 / 972) Fission yeast MAYDAFGKPGYGPDFNSAFSPGMGGGAGFNEYDQSSQPSVDRQQGAGNKLRPVTIKQILNASQVHADAEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEVRHWEHIDALSELATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIAVHLHFTQKANAVNGANAPGYGTSNALGYNNISSNGAANSLEQKLAEYSLTPAQMTVMQAIHSAPETNEGVHVRQLAQSVGPGIDLTAVTDFLQQEGIIYTTIDENHFKSVLQDQ C43C94A732E2EA9B sfr1-swi5-1 3147091 N/A 3147104 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli N/A 3147105 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli direct interaction direct interaction false false false sfr1-swi5-2 3147092 N/A 3147104 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli N/A 3147105 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli direct interaction direct interaction false false false sfr1-swi5-3 3147093 N/A 3147104 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli N/A 3147105 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli direct interaction direct interaction false false false swi5-sfr1-4 3147094 N/A 3147104 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3147105 unspecified role unspecified role bait bait ecolx Escherichia coli direct interaction direct interaction false false false sfr1-swi5-4 3147095 N/A 3147104 unspecified role unspecified role bait bait ecolx Escherichia coli N/A 3147105 unspecified role unspecified role prey prey ecolx Escherichia coli direct interaction direct interaction false false false rad51-sfr1-1 3147096 N/A 3147106 unspecified role unspecified role bait bait spofr Spodoptera frugiperda (Fall armyworm) Fall armyworm N/A 3147104 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3147105 unspecified role unspecified role prey prey ecolx Escherichia coli association association false false false sfr1-rad51-1 3147097 N/A 3147106 unspecified role unspecified role prey prey spofr Spodoptera frugiperda (Fall armyworm) Fall armyworm N/A 3147104 unspecified role unspecified role bait bait ecolx Escherichia coli N/A 3147105 unspecified role unspecified role prey prey ecolx Escherichia coli association association false false false swi5-rad51-1 3147098 N/A 3147106 unspecified role unspecified role prey prey spofr Spodoptera frugiperda (Fall armyworm) Fall armyworm N/A 3147104 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3147105 unspecified role unspecified role bait bait ecolx Escherichia coli association association false false false dmc1-sfr1-1 3147099 N/A 3147107 unspecified role unspecified role bait bait ecolx Escherichia coli N/A 3147104 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3147105 unspecified role unspecified role prey prey ecolx Escherichia coli association association false false false sfr1-dmc1-1 3147100 N/A 3147107 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3147104 unspecified role unspecified role bait bait ecolx Escherichia coli N/A 3147105 unspecified role unspecified role prey prey ecolx Escherichia coli association association false false false swi5-dmc1-1 3147101 N/A 3147107 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3147104 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3147105 unspecified role unspecified role bait bait ecolx Escherichia coli association association false false false rpa1-rpa2-5 3147102 N/A 3147108 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli N/A 3147109 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli N/A 3147110 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli physical association physical association false false false rpa1-rpa2-6 3147103 N/A 3147108 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli N/A 3147109 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli N/A 3147110 unspecified role unspecified role neutral component neutral component ecolx Escherichia coli physical association physical association false false false