IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ http://www.ebi.ac.uk/ van-2011-1 yeast Saccharomyces cerevisiae Baker's yeast crac crac CRAC cross-linking and analysis of cDNAs crac partial nucleotide sequence partial nucleotide sequence identification partial nucleotide sequence van Nues RW., Granneman S., Kudla G., Sloan KE., Chicken M., Tollervey D., Watkins NJ. n.j.watkins@ncl.ac.uk The EMBO journal 2011 imex curation Only protein-protein interactions imex curation snr13 yeast small nucleolar RNA 13 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AGGAAGUUUUUUCCUUUUUAUAUGAUGAAUAUGAGUGCAUUUGGCUCGAGUUGCUGUUUGGCUUUUGCCAAAUCAGUAACGGUGUGGAAAAACUCAAGCUACCUUUUUUUACUUUUAUCUGACC snr74 yeast small nucleolar RNA 74 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UGCAGAAGAUGAAACAAAUUACUCAAAUAGACAAGCAUAUGUCUGAUCUUCAUGAUUGAAAAGAGCAAUUAGUGUCUGAUGCAAUUUA snr73 yeast small nucleolar RNA 73 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUUUAUGAUGAUUUCCACAUUUCACGACGGUCAACUGCGUUUUUCGAAUGUUUAUCGAUUAACUUUGAUGAUAUUUCGCCUGUGACAGGGCGUGGUACUGAGCUUU snr70 yeast small nucleolar RNA 70 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UGAUAUGAUGAUUUGUUGUCGACCGGGCGGACAUAUUAGUAUCUGUUAAAGGGUCGCCGUCUACUCUCAUCGUUCUUUUGUGUACAAAUUUUUUAAAGGAGCGAUGUUGAUGGCAUUAUGGUUCUUUAGUGGAGAAUUGAUGAUUGGUCACAAGACAUCUGAUU snr63 yeast small nuclear RNA 63 yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUUAAUGAUGAAGAUUUUAAUUUUCCGUUGGUCUAUUAAGAACAGAAGUACUUCAAAACUACUUUUUAAGACCAUCCUUUUACAGUAUUUUUUCAAUAUUGUAAAACUUCUCAUUUACUUUGUGUCUUUAUGAUCUCAUCGUUCUGGUGGACCAUAAUCAGACGCACGGUAUACUUCGUUUCUGUUGGAGAAUAUUGGGAGUCUUUUAAUGUGAUGAGUGGCCAACAUAACCUUAUAGUCAUAGUUACACUGAUU snr61 yeast small nucleolar RNA 61 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast CUACAAUGAUGAUAAAAUUUACUAUUCAGUUCUGCUUCUGAACCAAAAUAAUAGGAAGAUAACCAAUUUUACCAAAGCUCAAAUCUGAUU snr57 yeast small nuclear RNA 57 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AAGCGUGAUUAUAAAAAAUGAUUUAAAUAUUUUUCUGAGGAAGUAUAUGCAGGACAUAUUGUGAAUUAGGAAUUCUUCGUUUAUGAUC snr56 yeast small nuclear RNA 56 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUAACAUGAUGAAAAAAUAUAUUAACACAGACCUGUACUGAACUUUUCGAAGUUUUGCAGAUAACAAUAUUGCUUUUUUUCUCUGACU snr54 yeast small nuclear RNA 54 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAAGAUGAUGAUCAACUUUUUAUAUCAAUAACUUUCGUUCUACUGACUGUGAUCAAACGAUCUUGUAGAGAACUUUUACUCUGAAU snr79 yeast small nucleolar RNA 79 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUAAUGAUGAUAGCAUGAUUUAUGUUGCUCGAAGUUAAUCGAUGUGAGCACAAUGAUUUCUCAAGACUACAACGGUAUCUGAAU snr77 yeast small nucleolar RNA 77 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUCAUAUGAUGAUUAUAACAAAAACAAAAGCUGGAAUUACUGGCUGAACGAGUAUAUGUUGAUACGUUUUUGCACUAUCCUGACCUAG snr51 yeast small nuclear RNA 51 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAUUAUGAUGAUUUUUUUAUAUUCACACUGUACUAGAUUGGUCUCUUUAACGAAGGGGCUAAUUGAUGACUACAAAAUAAAAAAUAACUGAUUUAAUGACUCUGAAA snr52 yeast small nucleolar RNA 52 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UACUAUGAUGAAUGACAUUAGCGUGAACAAUCUCUGAUACAAAAUCGAAAGAUUUUAGGAUUAGAAAAACUUAUGUUGCCUUCCUUCUGAAA snr75 yeast small nucleolar RNA 75 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUAUGAUGAGAUAUUUAUAGAUGACGAGUCUGAUCAUUCGUGAAGACACAACUAUUAAAAUUACCAUUCAUGCCUUUCUGAAGCUGUUU snr47 yeast small nucleolar RNA 47 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AUAUAUGAUGAUAUCCUAUAACAACAACAACAUGAAUUUCUUCGUCCGAAUCCUUUAUAGGUGGAAACAAACUUUGACAAUAGCUUUUUAACACUGAUA snr45 yeast small nucleolar RNA 45 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AUGACCUUCCAAGUUUUUAAAAGAAUACGAUGAUAUUAUUUGCGUUUCAAAUCGAACAAUUCUUCUCGGAGCGAUCUGAGGUUUUAAUGGAGAUAGCGGUUCCUGCGCAACCCAUUGAUCUUGUUACAUUCUUAAGAAUGACAAGGACGCUUUUAUAAAAUUCUGAUUCUUU snr41 yeast small nuclear RNA 41 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UCCCCUAUGAUUAAAAAUUAUUAAUCAUAUACCAAUUGUUCCGACUGAAUAGUGGUUUAACUACAUGUCGACAACCCUUUUUCGUUAAGUUUCAG snr40 yeast small nucleolar RNA 40 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUAAAUGACGAGAAAAAAGCUGUGCACCAGUCUGAACAUGGAUGCCACAAGUACUCAGGUGUCCUAUGAAGCAUUAAGUAUACCCAAAUUUCUGAUC snr38 yeast small nucleolar RNA 38 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast CAUAAUGAUGAAAAAAAAUUUUAUCAAACAGUUAUCCCUGUCUGAAUGGGUAAUAAUAGGUAACCUCUCAUAUGUUGAUAUUUGUAUUUCUGAUA snr24 yeast u24 small nuclear RNA 24 U24 snrna small nuclear rna snRNA snrna yeast Saccharomyces cerevisiae Baker's yeast UCAAAUGAUGUAAUAACAUAUUUGCUACUUCAGAUGGAACUUUGAGUUCCGAAUGAGACAUACCAAUUAUCACCAAGAUCUCUGAUGAA snr190 yeast small nucleolar RNA 190 yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GGCCCUGAUGAUAAUGGUGUCUCUUCUUUCCUCGUCCGAUUCGACCAUGACGACAAGGGAUUUUAUCUCGUUCUCUUAAUGCGAAUGAUUUUGAAAAGAUGUUGCUUCUGUGACAUUUUUUUUUAAUCAUUUGUGUUUGCAAACGGGAACUUUUCUUGCCAGUGUUAUACAACACAUGCAGAUCUGAGCC snru3b yeast small nuclear RNA U3b Yeast snrna small nuclear rna snRNA snrna yeast Saccharomyces cerevisiae Baker's yeast GUCGACGUACUUCAGUAUGUUUUAUACCAUAUACUUUAUUAGGAAUAUAACAAAGCAUACCCAAUAAUUAGGCAAUGCGAUUGUCGUAUUCAACAACCAUCUUCUAUUUCACCAGCUUCAGGUUUUGACUAACACAUUCAACAGUAGGAUCAUUUCUAUAGGAAUCGUCACUCUUUGACUCUUCAAAAGAGCCACUGAAUCCAACUUGGUUGAUGAGCCCCAUAACCUUUGUACCCCAGAGUGAGGAAAUGAAAUCGAAUUUAAAUUAGCUUGGUCCGCAAUCCUUAGCGGUUCGGCCAUCUAUAAUUUUGAAUAAAAUUUUGCUUUGCCGUUGCAAUUGUGAUAACUUCCUUUGGAAUUUGUUGCGAUAUUUAAUGGCGCGAUGAUCUUGACCCAUCCUAUGUGCUUCCAUUUUGGAAGGAUAGGGAUUCAUGGGUGGGUACAAAUGGCAGUCUGACAAGU snru3a yeast small nuclear RNA U3a Yeast snrna small nuclear rna snRNA snrna yeast Saccharomyces cerevisiae Baker's yeast GUCGACGUACUUCAGUAUGUAAUAUACCCCAAACAUUUUACCCACAAAAAACCAGGAUUUGAAAACUAUAGCAUCUAAAAGUCUUAGGUACUAGAGUUUUCAUUUCGGAGCAGGCUUUUUGAAAAAUUUAAUUCAACCAUUGCAGCAGCUUUUGACUAACACAUUCUACAGUAGGAUCAUUUCUAUAGGAAUCGUCACUCUUUGACUCUUCAAAAGAGCCACUGAAUCCAACUUGGUUGAUGAGUCCCAUAACCUUUGUACCCCAGAGUGAGAAACCGAAAUUGAAUCUAAAUUAGCUUGGUCCGCAAUCCUUAGCGGUUCGGCCAUCUAUAAUUUUGAAUAAAAAUUUUGCUUUGCCGUUGCAUUUGUAGUUUUUUCCUUUGGAAGUAAUUACAAUAUUUUAUGGCGCGAUGAUCUUGACCCAUCCUAUGUACUUCUUUUUUGAAGGGAUAGGGCUCUAUGGGUGGGUACAAAUGGCAGUCUGACAAGU snru14 yeast small nucleolar RNA U14 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UCACGGUGAUGAAAGACUGGUUCCUUAACAUUCGCAGUUUCCACGGUAGGAGUACGCUUACGAACCCAUCGUUAGUACUCUCGGUGACCGCUCUUCUUUAGAGACCUUCCUAGGAUGUCUGAGUGA fbrl_yeast rRNA 2'-O-methyltransferase fibrillarin NOP1 LOT3 YDL014W D2870 U3 small nucleolar RNA-associated protein NOP1 Histone-glutamine methyltransferase protein protein yeast Saccharomyces cerevisiae Baker's yeast MSFRPGSRGGSRGGSRGGFGGRGGSRGGARGGSRGGFGGRGGSRGGARGGSRGGFGGRGGSRGGARGGSRGGRGGAAGGARGGAKVVIEPHRHAGVYIARGKEDLLVTKNMAPGESVYGEKRISVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDHCIVVGRYMRSGLKK 56A8B958A7B6066E snr4 yeast small nucleolar RNA 4 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AACUAUUACAGUCGAUGAGGAUAGGUUAUAGUUCAUGUGUAACAUCUGUGUUUUAAAAUAACUCUAGUUAUCCGGGGCGUUUUUCACAAAGUUUGUGUAAGAUGCUUUCCUGGGUCGAUGUGGAUUGUGCCGUGGCCUUUUUCACCACCUUUAUAGCGGUGCUUUAACUAUUAAUAACUGAGGCUG nop56_yeast Nucleolar protein 56 SIK1 Ribosome biosynthesis protein SIK1 YLR197W L8167.9 NOP56 Suppressor of I kappa b protein 1 protein protein yeast Saccharomyces cerevisiae Baker's yeast MAPIEYLLFEEPTGYAVFKVKLQQDDIGSRLKEVQEQINDFGAFTKLIELVSFAPFKGAAEALENANDISEGLVSESLKAILDLNLPKASSKKKNITLAISDKNLGPSIKEEFPYVDCISNELAQDLIRGVRLHGEKLFKGLQSGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYTFAKLVLFIKDKASLNDDSLHDLAALLNEDSGIAQRVIDNARISMGQDISETDMENVCVFAQRVASLADYRRQLYDYLCEKMHTVAPNLSELIGEVIGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFISKASAKNKGRISRYLANKCSMASRIDNYSEEPSNVFGSVLKKQVEQRLEFYNTGKPTLKNELAIQEAMELYNKDKPAAEVEETKEKESSKKRKLEDDDEEKKEKKEKKSKKEKKEKKEKKDKKEKKDKKEKKDKKKKSKD F8522A5870EF4842 nop58_yeast Nucleolar protein 58 Nucleolar protein 5 NOP58 NOP5 YOR310C O6108 protein protein yeast Saccharomyces cerevisiae Baker's yeast MAYVLTETSAGYALLKASDKKIYKSSSLIQDLDSSDKVLKEFKIAAFSKFNSAANALEEANSIIEGKVSSQLEKLLEEIKKDKKSTLIVSETKLANAINKLGLNFNVVSDAVTLDIYRAIKEYLPELLPGMSDNDLSKMSLGLAHSIGRHKLKFSADKVDVMIIQAIALLDDLDKELNTYAMRCKEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASETDLSEILPEEIEERVKTAAEVSMGTEITQTDLDNINALAEQIVEFAAYREQLSNYLSARMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLESRAKVENRLSQLEGRDLRTTPKVVREAKKVEMTEARAYNADADTAKAASDSESDSDDEEEEKKEKKEKKRKRDDDEDSKDSKKAKKEKKDKKEKKEKKEKKEKKEKKEKKEKKSKKEKKEKK 8A2889448B2A19E2 snr87 yeast small nucleolar RNA 87 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUAACUGAAUGAUGAUAUAAUUUGCGAUCUAGGGCUAAUCACUUGGAACACCGCCAUGUUCUAUAUGGGUGAUUAGCGAAGUGCGAAAAAUUUUUUAUCUGAUAUUUUC snr71 yeast small nucleolar RNA 71 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUUAUAUGAUGAUAACCUUCUCAGCUCACUCAGAUCUUUUGAUAUGAUUGAUAAAAAUUUCCUAUCCAACAUUCAUCAAUUUAUCUGACC snr68 yeast-1 small nuclear RNA 68 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAUCAUGAUGAGCAUUUAUUUUACUGCGUUAUCGUAUUGACGGGGGCUGUUUAAGUACAGUCUGUUUUAUAAUCUAUAUUCAUUUAUAUUUUAUAUUUCUUACCGAGGAAAUUGACUCUUAACAGAUUUGCUGAAA snr67 yeast-1 small nucleolar RNA 67 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAACAUGAUGACUAAGUUGUCGCCCCAAGCGGAUCUUUGAAAUGACUGAUUUUACAAACAACAAACACUGAAAAUUCUGAAA snr66 yeast-1 small nuclear RNA 66 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AUCAAAUGAUGAAAUACCAAUGCAACAGAGUCAAGCUCUGAGUUUCAAAAAGAAACAUGGACGAGAUUGCUUUUUUAUUACUGACC snr60 yeast-1 small nuclear RNA 60 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UGUUAAUGAUGAUAACCAAAGAUGCAUAGUUCAACUGAUUGAACAUACUAUCGAAAUGAAGAUAAAAAUUUCCAUCGAAAUUAGUCUUUCGCUCCUAUCUGAAC nop1-1 1856975 N/A 1856976 unspecified role unspecified role prey prey N/A 1856977 unspecified role unspecified role prey prey N/A 1856978 unspecified role unspecified role prey prey N/A 1856979 unspecified role unspecified role prey prey N/A 1856980 unspecified role unspecified role prey prey N/A 1856981 unspecified role unspecified role prey prey N/A 1856982 unspecified role unspecified role prey prey N/A 1856983 unspecified role unspecified role prey prey N/A 1856984 unspecified role unspecified role prey prey N/A 1856985 unspecified role unspecified role prey prey N/A 1856986 unspecified role unspecified role prey prey N/A 1856987 unspecified role unspecified role prey prey N/A 1856988 unspecified role unspecified role prey prey N/A 1856989 unspecified role unspecified role prey prey N/A 1856990 unspecified role unspecified role prey prey N/A 1856991 unspecified role unspecified role prey prey N/A 1856992 unspecified role unspecified role prey prey N/A 1856993 unspecified role unspecified role prey prey N/A 1856994 unspecified role unspecified role prey prey N/A 1856995 unspecified role unspecified role prey prey N/A 1856996 unspecified role unspecified role prey prey N/A 1856997 unspecified role unspecified role prey prey N/A 1856998 unspecified role unspecified role prey prey N/A 1856999 unspecified role unspecified role prey prey N/A 1857000 unspecified role unspecified role bait bait tag tap tagged calmodulin binding peptide plus protein a tag CBP-ProtA tagged CBP-ProtA tagged tap tagged c-term range C-terminal range c-term range c-term range C-terminal range c-term range false N/A 1857001 unspecified role unspecified role prey prey physical association physical association false false false Fig2A nop56-1 1856975 N/A 1856977 unspecified role unspecified role prey prey N/A 1856979 unspecified role unspecified role prey prey N/A 1856980 unspecified role unspecified role prey prey N/A 1856982 unspecified role unspecified role prey prey N/A 1856983 unspecified role unspecified role prey prey N/A 1856988 unspecified role unspecified role prey prey N/A 1856987 unspecified role unspecified role prey prey N/A 1856991 unspecified role unspecified role prey prey N/A 1856993 unspecified role unspecified role prey prey N/A 1856997 unspecified role unspecified role prey prey N/A 1856998 unspecified role unspecified role prey prey N/A 1856999 unspecified role unspecified role prey prey N/A 1857002 unspecified role unspecified role bait bait tag tap tagged calmodulin binding peptide plus protein a tag CBP-ProtA tagged CBP-ProtA tagged tap tagged c-term range C-terminal range c-term range c-term range C-terminal range c-term range false N/A 1857001 unspecified role unspecified role prey prey physical association physical association false false false Fig2A nop58-8 1856975 N/A 1856991 unspecified role unspecified role prey prey N/A 1856993 unspecified role unspecified role prey prey N/A 1856994 unspecified role unspecified role prey prey N/A 1856995 unspecified role unspecified role prey prey N/A 1856996 unspecified role unspecified role prey prey N/A 1856997 unspecified role unspecified role prey prey N/A 1856998 unspecified role unspecified role prey prey N/A 1856999 unspecified role unspecified role prey prey N/A 1856985 unspecified role unspecified role prey prey N/A 1856986 unspecified role unspecified role prey prey N/A 1856978 unspecified role unspecified role prey prey N/A 1856979 unspecified role unspecified role prey prey N/A 1857003 unspecified role unspecified role bait bait tag tap tagged calmodulin binding peptide plus protein a tag CBP-ProtA tagged CBP-ProtA tagged tap tagged c-term range C-terminal range c-term range c-term range C-terminal range c-term range false N/A 1856983 unspecified role unspecified role prey prey N/A 1856984 unspecified role unspecified role prey prey N/A 1856988 unspecified role unspecified role prey prey N/A 1856987 unspecified role unspecified role prey prey N/A 1856990 unspecified role unspecified role prey prey N/A 1857004 unspecified role unspecified role prey prey N/A 1857005 unspecified role unspecified role prey prey N/A 1857006 unspecified role unspecified role prey prey N/A 1857007 unspecified role unspecified role prey prey N/A 1857008 unspecified role unspecified role prey prey N/A 1856981 unspecified role unspecified role prey prey N/A 1857009 unspecified role unspecified role prey prey N/A 1856981 unspecified role unspecified role prey prey physical association physical association false false false Fig2A