mpidb The Microbial Protein Interaction Database scheu-2012-1 CitA/CitB two-component system regulating citrate fermentation in Escherichia coli and its relation to the DcuS/DcuR system in vivo. ecolx Escherichia coli fret fluorescent resonance energy transfer FRET RET FRET analysis FRET RET FRET analysis fret tag fluorescence tag visualisation by fluorescence tag fluorescence Scheu P.D., Witan J., Rauschmeier M., Graf S., Liao Y.F., Ebert-Jung A., Basche T., Erker W., Unden G. J. Bacteriol. (0021-9193) 2012 Only protein-protein interactions imex curation scheu-2012-2 CitA/CitB two-component system regulating citrate fermentation in Escherichia coli and its relation to the DcuS/DcuR system in vivo. ecolx Escherichia coli adenylate cyclase adenylate cyclase complementation bacterial two-hybrid bacterial two-hybrid adenylate cyclase predetermined predetermined participant predetermined Scheu P.D., Witan J., Rauschmeier M., Graf S., Liao Y.F., Ebert-Jung A., Basche T., Erker W., Unden G. J. Bacteriol. (0021-9193) 2012 Only protein-protein interactions imex curation dcus_ecoli Sensor histidine kinase DcuS yjdH dcuS b4125 JW4086 Fumarate sensor protein protein ecoli Escherichia coli (strain K12) MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKALNGEENVAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSESQLPDSGSEDQVATLITTLGNLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR dpib_ecoli Sensor histidine kinase DpiB ybeP Sensor histidine kinase CitA dpiB citA mpdB b0619 JW0611 protein protein ecoli Escherichia coli (strain K12) MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTASFEDYLTLHVRDMAMNQAKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGDRHSIRLYHPNPEKIGYPMQFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVIGVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIVEVVRPADFFTEQIDEKRQDVVANFNGLSVIANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGESQAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAIVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPIDR dcur_ecoli Transcriptional regulatory protein DcuR yjdG dcuR b4124 JW4085 protein protein ecoli Escherichia coli (strain K12) MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ dcus-dcus-4 1339369 not-defined-1493989083 1339371 unspecified role unspecified role fluorescence donor fluorescence donor p0aec8-- P0AEC8-- cfp tag cyan fluorescent protein tag CFP cyan fluorescent protein cyan fluorescent protein CFP cfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false not-defined-2111021566 1339371 unspecified role unspecified role fluorescence accept fluorescence acceptor fluorescence accept p0aec8-- P0AEC8-- yfp tag yellow fluorescent protein tag YFP yellow fluorescent protein yellow fluorescent protein YFP yfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false proximity proximity close-contact colocalization neighbourhood interaction false false false figure 2 dcus-dpib-2 1339369 not-defined-950237587 1339371 unspecified role unspecified role fluorescence donor fluorescence donor p0aec8-- P0AEC8-- cfp tag cyan fluorescent protein tag CFP cyan fluorescent protein cyan fluorescent protein CFP cfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false not-defined-934324943 1339372 unspecified role unspecified role fluorescence accept fluorescence acceptor fluorescence accept p77510-- P77510-- yfp tag yellow fluorescent protein tag YFP yellow fluorescent protein yellow fluorescent protein YFP yfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false proximity proximity close-contact colocalization neighbourhood interaction false false false figure 2 dcus-dcur 1339370 not-defined-1474442237 1339371 unspecified role unspecified role bait bait not-defined-2104529595 1339373 unspecified role unspecified role prey prey physical association physical association false false false figure 3 dcus-dcus-3 1339370 not-defined-218837934 1339371 unspecified role unspecified role prey prey not-defined-1105380769 1339371 unspecified role unspecified role bait bait physical association physical association false false false figure 3