mpidb The Microbial Protein Interaction Database chodavarapu-2008-1 Escherichia coli DnaA interacts with HU in initiation at the E. coli replication origin. ecoli Escherichia coli (strain K12) elisa enzyme linked immunosorbent assay ELISA ELISA elisa antibody detection identification by antibody antibody detection Chodavarapu S., Felczak M.M., Yaniv J.R., Kaguni J.M. Mol. Microbiol. (0950-382X) 2008 Only protein-protein interactions imex curation dbha_ecoli DNA-binding protein HU-alpha hupA b4000 NS2 HU-2 JW3964 protein protein ecoli Escherichia coli (strain K12) MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK dnaa_ecoli Chromosomal replication initiator protein DnaA dnaA b3702 JW3679 protein protein ecoli Escherichia coli (strain K12) MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS dbhb_ecoli DNA-binding protein HU-beta hupB hopD b0440 NS1 HU-1 JW0430 protein protein ecoli Escherichia coli (strain K12) MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN dnaa-hupa-2 1333002 not-defined-1016169874 1333003 unspecified role unspecified role prey prey not-defined-1887824749 1333004 unspecified role unspecified role bait bait direct interaction direct interaction false false false Fig. 5 dnaa-hupa-3 1333002 not-defined-1016169874 1333003 unspecified role unspecified role prey prey not-defined-1887824749 1333004 unspecified role unspecified role bait bait n/a 1333005 unspecified role unspecified role prey prey proximity proximity close-contact colocalization neighbourhood interaction false false false Fig. 5 hupa-dnaa 1333002 not-defined-1887824749 1333004 unspecified role unspecified role prey prey region required to bind necessary binding region required to bind certain certain sequence position certain certain certain sequence position certain false not-defined-1016169874 1333003 unspecified role unspecified role bait bait direct interaction direct interaction false false false Fig. 6c,d