IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ http://www.ebi.ac.uk/ jaillais-2007-1 The Retromer Protein VPS29 Links Cell Polarity and Organ Initiation in Plants. yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast 2 hybrid two hybrid 2H 2h Gal4 transcription regeneration two-hybrid yeast two hybrid 2-hybrid classical two hybrid classical two hybrid 2H two-hybrid 2-hybrid Gal4 transcription regeneration 2h yeast two hybrid Y2H Y-2H 2 hybrid predetermined predetermined participant predetermined Jaillais Y., Santambrogio M., Rozier F., Fobis-Loisy I., Miege C., Gaude T. thierry.gaude@ens-lyon.fr Cell (0092-8674) 2007 Only protein-protein interactions 5 imex curation jaillais-2007-2 The Retromer Protein VPS29 Links Cell Polarity and Organ Initiation in Plants. arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress anti tag coip anti tag coimmunoprecipitation anti tag coip western blot western blot Immuno blot Immuno blot Jaillais Y., Santambrogio M., Rozier F., Fobis-Loisy I., Miege C., Gaude T. Transgenic arabidopsis expressing VPS29-GFP protein fusion was used in this study. thierry.gaude@ens-lyon.fr Cell (0092-8674) 2007 Only protein-protein interactions 5 imex curation jaillais-2007-3 The Retromer Protein VPS29 Links Cell Polarity and Organ Initiation in Plants. arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress fluorescence imaging fluorescence microscopy fluorescence imaging predetermined predetermined participant predetermined Jaillais Y., Santambrogio M., Rozier F., Fobis-Loisy I., Miege C., Gaude T. Transgenic arabidopsis expressing VPS29-GFP protein fusion was used in this study. It was not possible to identify the RABF2b mentioned in this study. thierry.gaude@ens-lyon.fr Cell (0092-8674) 2007 Only protein-protein interactions 5 imex curation vp35a_arath Vacuolar protein sorting-associated protein 35A VPS35A Protein ZIG SUPPRESSOR 3 Vesicle protein sorting 35A ZIP3 T17A5.7 At2g17790 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MIADGSEDEEKWLAAGAAAFKQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPHKYYDLYMRAFDELRKLEIFFMEETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTKEAPAKEILKDLVEMCRGIQHPLRGLFLRSYLAQISRDKLPDIGSEYEGDADTVIDAVEFVLLNFTEMNKLWVRMQHQGPAREKERREKERGELRDLVGKNLHVLSQLEGVDLDMYRDTVLPRVLEQIVNCRDEIAQYYLIDCIIQVFPDEYHLQTLDVLLGACPQLQASVDIMTVLSRLMERLSNYAALNAEVLPYFLQVEAFSKLNNAIGKVIEAQEDMPILSAVTLYSSLLKFTLHVHPDRLDYADQVLGSCVKQLSGKGKIDDTRATKELVSLLSAPLEKYNDVVTALKLTNYPLVVEYLDTETKRIMATVIVRSIMKNNTLITTAEKVEALFELIKGIINDLDEPQGLEVDEDDFQEEQNSVALLIHMLYNDDPEEMFKIVNVLKKHFLTGGPKRLKFTIPPLVVSTLKLIRRLPVEGDNPFGKEASVTATKIFQFLNQIIEALPNVPSPDLAFRLYLQCAEAADKCDEEPIAYEFFTQAYILYEEEISDSKAQVTALQLIIGTLQRMQVFGVENRDTLTHKATGYAAKLLKKPDQCRAVYACSHLFWLEDRETIQDGERVLLCLKRALKIANSAQQVANTARGSTGSVTLFIEILNKYLYFYEKGVPQITVESVESLIKLIKNEESMPSDPSAESFFATTLEFMEFQKQKEGAIGERYQAIKV vp26a_arath Vacuolar protein sorting-associated protein 26A VPS26A Vesicle protein sorting 26A MNC6.7 At5g53530 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MNYLLGAFKPACNISITFTDGKNRKQVPTKKDNGQIVMNPLFQSQETIAGKINIEPYQGKKVEHNGVKVELLGQIEMYFDRGNFYDFTSLVREIDVPGEIYERKTYPFEFSSVEMPYETYNGVNVRLRYVLKVTVTRGYAGSIVEYQDFVVRNYVPLPPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYFLLVRIKIKNMDLEIRRRESTGAGANTHVETETLAKFELMDGAPVRGESIPVRVFLTPYDLTPTHKNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLKEETS vps29_arath Vacuolar protein sorting-associated protein 29 VPS29 MAG1 Protein MAIGO 1 Vesicle protein sorting 29 T23J7.140 At3g47810 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIVRGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEFKKPPTTSSGP q0wtd7_arath At3g51310 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MEYLDRETNKAMAIILVQSVFKNNTHIATADEVDALFELAKGLMKDFDGTIDDEIDEEDFQEEQNLVARLVNKLYIDDPEEMSKIIFTVRKHIVAGGPKRLPLTIPPLVFSALKLIRRLRGGDENPFGDDASATPKRILQLLSETVEVLSDVSAPDLALRLYLQCAQAANNCELETVAYEFFTKAYLLYEEEISDSKAQVTALRLIIGTLQRMRVFNVENRDTLTHKATGYSARLLRKPDQCRAVYECAHLFWADECENLKDGERVVLCLKRAQRIADAVQQMANASRGTSSTGSVSLYVELLNKYLYFLEKGNQQVTGDTIKSLAELIKSETKKVESGAEPFINSTLRYIEFQRQQEDGGMNEKYEKIKMEWFE vp26b_arath Vacuolar protein sorting-associated protein 26B VPS26B Vesicle protein sorting 26B T29A15.180 At4g27690 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MNYLLGAFKPACNISITFSDGKNRKQVPMKKENGQTALVPLFHSQDTISGKVCIEPYQGKKVEHNGVKVELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFPTVEMPYETYNGVNVRLRYVLKVTVTRGYAGSILEYQELVVRNYAPLPDINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYFLLVRIKMKNMDLEIRRRESTGAGANTHVETETLAKFELMDGTPVRGESIPVRLFLAPYDLTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLKEDASS snx1_arath Sorting nexin 1 SNX1 VPS5 Vacuolar protein sorting-associated protein 5 homolog K16F4.11 MBL20 At5g06140 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MESTEQPRNISGSMQSPRSPSSHPYLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRAALDIFVNRIALHPELQQSEDLRTFLQADEETMDRFRFQETSIFKKPADLMQMFRDVQSKVSDAVLGKEKPVEETTADYEKLKHYIFELENHLTEAQKHAYRLVKRHRELGQSLLDFGKAVKLLGACEGEPTGKAFSDLGTKSELLSIKLQKEAQQVLMNFEEPLKDYVRYVQSIKATIAERGTAFKQHCELSETTKLKEINLDKLMLTRSDKVGEAEIEYREIKAESEEATRRFERIVKRMEDEIVRFQEQKTEEMGVAFHQFAKGQARLANSVADAWRSLLPKLEASYSV at5g53530-at2g17790 Interaction between At5g53530 and At2g17790 proteins 671505 N/A 671508 unspecified role unspecified role prey prey N/A 671509 unspecified role unspecified role bait bait physical association physical association false false false 2C at3g47810-at2g17790 Interaction between At3g47810 and At2g17790 proteins 671505 N/A 671510 unspecified role unspecified role bait bait N/A 671508 unspecified role unspecified role prey prey physical association physical association false false false 2C at2g17790-at5g53530 Interaction between At2g17790 and At5g53530 proteins 671505 N/A 671509 unspecified role unspecified role prey prey N/A 671508 unspecified role unspecified role bait bait physical association physical association false false false 2C at3g47810-at2g17790- Interaction between At3g47810 and At2g17790 proteins 671506 N/A 671511 unspecified role unspecified role prey prey N/A 671512 unspecified role unspecified role prey prey N/A 671509 unspecified role unspecified role prey prey N/A 671508 unspecified role unspecified role prey prey N/A 671510 unspecified role unspecified role bait bait region gfp tag green fluorescent protein tag GFP green fluorescent protein GFP green fluorescent protein gfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false association association false false false 2D S7 at3g47810-snx1 Colocalisation between At3g47810 and SNX1 proteins 671507 N/A 671513 unspecified role unspecified role neutral component neutral component region rfp tag red fluorescent protein tag red fluorescent protein RFP red fluorescent protein RFP rfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false N/A 671510 unspecified role unspecified role neutral component neutral component region gfp tag green fluorescent protein tag GFP green fluorescent protein GFP green fluorescent protein gfp tag undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined false colocalization colocalization false false false 4 SNX1 is an endosomal marker protein.