IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ http://www.ebi.ac.uk/ peltier-2004-1 Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications. arath-leaf Arabidopsis thaliana leaf leaf leaf biochemical biochemical sequence tag sequence tag identification sequence tag Peltier JB., Ripoll DR., Friso G., Rudella A., Cai Y., Ytterberg J., Giacomelli L., Pillardy J., van Wijk KJ. jp269@cornell.edu J. Biol. Chem. (0021-9258) 2004 clpp6_arath ATP-dependent Clp protease proteolytic subunit 6, chloroplastic NCLPP1 NCLPP6 Endopeptidase ClpP6 nClpP1 F25C20.10 CLPP6 At1g11750 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MAGLAISPPLGLSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNKAPRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETEY clpr1_arath ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic Protein SUPPRESSOR OF VARIEGATION 2 SVR2 nClpP5 F2J10.14 CLPR1 At1g49970 NCLPP5 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MATALVSPLTSQLNHEAVCSKFVLPKSPFMSGSKLFSSNMPCSTVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFYGLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADARRYSMSVQMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQRAMRPGGGSPAAPAGLR clpp1_arath Chloroplastic ATP-dependent Clp protease proteolytic subunit 1 ClpP Endopeptidase ClpP1 clpP1 AtCg00670 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAYGIVDLVAVQ clpp5_arath ATP-dependent Clp protease proteolytic subunit 5, chloroplastic Endopeptidase ClpP5 nClpP1 T14P4.12 CLPP5 NCLPP1 NCLPP5 At1g02560 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA clpt2_arath ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic CLPT2 CLPS2 F16J13.130 At4g12060 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MAAHSSCNFALTNPIISQIDSFSKKKLSVPLYFFSTRKALTNPWLGVVDSSLSLTSPVSALQTNRPRRIHKSAISSLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELESFASESGFLDE clpr4_arath ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic CLPR4 HON5 Protein HAPPY ON NORFLURAZON 5 FCAALL.413 dl4550c At4g17040 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDLKKAQLI clpp3_arath ATP-dependent Clp protease proteolytic subunit 3, chloroplastic CLPP3 CLP NCLPP3 NCLPP4 Endopeptidase ClpP3 nClpP4 F4N21.19 T12I7.12 At1g66670 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MEMSLRLASSSTSNPICLLNPGKNLNFPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGYAAIE clpr2_arath ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic CLPR2 NCLPP2 F5O11.13 At1g12410 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIVRPPRIKEDAPRQDESAGLG clpp4_arath ATP-dependent Clp protease proteolytic subunit 4, chloroplastic NCLPP3 NCLPP4 Endopeptidase ClpP4 nClpP3 MFC19.5 CLPP4 At5g45390 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY clpr3_arath ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic At1g09130 CLPR3 NCLPP8 nClpP8 F7G19.1 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKSVV clpt1_arath ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic CLPT1 CLPS1 nClpC-like protein T30C3.40 At4g25370 protein protein arath Arabidopsis thaliana (Mouse-ear cress) Mouse-ear cress MASYTVSFIPLTLSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLATQPSHRCFVPKLRCLTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFKKQGQ clpp-nclpp5-1 Complex purified by sucrose gradient followed by 2D-gel with native isoelectricfocusing and SDS-PAGE 164245 N/A 164246 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 N/A 164247 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 N/A 164248 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 N/A 164249 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 3.0 N/A 164250 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 N/A 164251 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 2.0 N/A 164252 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 N/A 164253 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 N/A 164254 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 3.0 N/A 164255 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 N/A 164256 unspecified role unspecified role neutral component neutral component arath-leaf Arabidopsis thaliana leaf leaf leaf Stoichiometry: 1.0 physical association physical association false false false The complex was purified from chloroplast stroma (5% loosely associated with thylakoid membrane). The stoichiometry is based on Coomassie and silver staining volumes normalised with the Lys, Arg, His and Tyr content in the different sequences