#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P32561	uniprotkb:P39001	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-20086|uniprotkb:D6VSI8|ensemblfungi:YDR207C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:ume6_yeast(display_long)|uniprotkb:UME6(gene name)|psi-mi:UME6(display_short)|uniprotkb:CAR80(gene name synonym)|uniprotkb:CARGR1(gene name synonym)|uniprotkb:YDR207C(locus name)|uniprotkb:YD8142.04C(orf name)|uniprotkb:Unscheduled meiotic gene expression protein 6(gene name synonym)|uniprotkb:Negative transcriptional regulator of IME2(gene name synonym)|uniprotkb:Regulator of inducer of meiosis protein 16(gene name synonym)|uniprotkb:NIM2(gene name synonym)|uniprotkb:RIM16(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_010493.1|sgd:S000002615|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009847"(spore germination)|go:"GO:0010673"(positive regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle)|go:"GO:0010674"(negative regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR001138(Fungal transcriptional regulatory protein, N-terminal)|interpro:IPR036864|rcsb pdb:6XAW|mint:P39001|ensemblfungi:YDR207C(gene)|ensemblfungi:YDR207C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001081"(nitrogen catabolite repression of transcription from RNA polymerase II promoter)|dip:DIP-959N	-	crc64:34FFD72A7E7425DB	crc64:0DDA0A6B4A157182	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:FYPIyvIh6lPIX4TSkGdpT47v/WM559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P34233	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-3027|uniprotkb:D6VX15|ensemblfungi:YKL185W	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:ash1_yeast(display_long)|uniprotkb:ASH1(gene name)|psi-mi:ASH1(display_short)|uniprotkb:Daughter cells HO repressor protein(gene name synonym)|uniprotkb:YKL185W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_012736.1|sgd:S000001668|dip:DIP-8053N|mint:P34233|ensemblfungi:YKL185W(gene)|ensemblfungi:YKL185W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0005933"(cellular bud)|go:"GO:0006325"(chromatin organization)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:1900461"(positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter)|go:"GO:1900477"(negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter)|interpro:IPR000679(Zinc finger, GATA-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)	-	crc64:34FFD72A7E7425DB	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:OKR/uOyZ4UWgJUNx3oB/PBhzfAc559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:Q07458	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-33895|uniprotkb:D6VRS3|ensemblfungi:YDL076C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:rxt3_yeast(display_long)|uniprotkb:RXT3(gene name)|psi-mi:RXT3(display_short)|uniprotkb:YDL076C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_010207.1|sgd:S000002234|mint:Q07458|dip:DIP-1797N|ensemblfungi:YDL076C(gene)|ensemblfungi:YDL076C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR013951(Histone deacetylation protein Rxt3)	-	crc64:34FFD72A7E7425DB	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:6fTNwtXcJvNN0VTp4LQ9XhNtLq8559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P50947	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-28808|uniprotkb:Q45TZ9|uniprotkb:D6W183|ensemblfungi:YNL097C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:pho23_yeast(display_long)|uniprotkb:PHO23(gene name)|psi-mi:PHO23(display_short)|uniprotkb:N2205(orf name)|uniprotkb:YNL097C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	sgd:S000005041|refseq:NP_014302.3|dip:DIP-4243N|mint:P50947|ensemblfungi:YNL097C(gene)|ensemblfungi:YNL097C_mRNA(transcript)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016573"(histone acetylation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0035064"(methylated histone binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787|interpro:IPR024610|interpro:IPR028651|reactome:R-SCE-3214847|reactome:R-SCE-3899300|reactome:R-SCE-6804758|reactome:R-SCE-6811555	-	crc64:34FFD72A7E7425DB	crc64:3BF7B519E77ED6EF	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:N8KCC01xvIWGV9jdfQ/ZzizkIws559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P38255	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-21537|uniprotkb:D6VQ96|ensemblfungi:YBR095C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:rxt2_yeast(display_long)|uniprotkb:YBR095C(locus name)|uniprotkb:YBR0822(orf name)|uniprotkb:RXT2(gene name)|psi-mi:RXT2(display_short)|uniprotkb:RAF60(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_009653.2|sgd:S000000299|mint:P38255|dip:DIP-6755N|ensemblfungi:YBR095C(gene)|ensemblfungi:YBR095C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016575"(histone deacetylation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:1990483"(Clr6 histone deacetylase complex I'')|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR013904(RXT2-like, N-terminal)|interpro:IPR039602	-	crc64:34FFD72A7E7425DB	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:vyk+t+m5t/bXnmpMYfeVXe4I1W0559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P38429	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-27570|uniprotkb:Q03501|uniprotkb:D6W089|ensemblfungi:YMR263W	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:sap30_yeast(display_long)|uniprotkb:YM8156.05(orf name)|uniprotkb:YMR263W(locus name)|uniprotkb:SAP30(gene name)|psi-mi:SAP30(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_013990.1|sgd:S000004876|dip:DIP-3846N|mint:P38429|ensemblfungi:YMR263W(gene)|ensemblfungi:YMR263W_mRNA(transcript)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006325"(chromatin organization)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR024145|interpro:IPR025718|interpro:IPR038291|reactome:R-SCE-3214815	-	crc64:34FFD72A7E7425DB	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:37Rq1e4YnQ0iYtV3Ax1RjddetpM559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:Q08923	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-33349|uniprotkb:Q6B1X3|uniprotkb:D6W3I7|ensemblfungi:YPL181W	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:cti6_yeast(display_long)|uniprotkb:Transcriptional regulatory protein CTI6(gene name synonym)|uniprotkb:CYC8-TUP1-interacting protein 6(gene name synonym)|uniprotkb:YPL181W(locus name)|uniprotkb:CTI6(gene name)|psi-mi:CTI6(display_short)|uniprotkb:RXT1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_015144.1|sgd:S000006102|ensemblfungi:YPL181W(gene)|ensemblfungi:YPL181W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0008134"(transcription factor binding)|mint:Q08923|dip:DIP-2958N|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0035064"(methylated histone binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787	-	crc64:34FFD72A7E7425DB	crc64:5123C56BB86ED991	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:cinec0yfaziNc2oeW6HGnp8fL60559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P31385	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-5755|uniprotkb:Q86ZS5|uniprotkb:D6VPK5|ensemblfungi:YAL013W	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:dep1_yeast(display_long)|uniprotkb:DEP1(gene name)|psi-mi:DEP1(display_short)|uniprotkb:FUN54(gene name synonym)|uniprotkb:YAL013W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_009389.3|sgd:S000000011|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|ensemblfungi:YAL013W(gene)|ensemblfungi:YAL013W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|dip:DIP-5922N|mint:P31385|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR013907(Sds3-like)|reactome:R-SCE-3214815	-	crc64:34FFD72A7E7425DB	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:85f0flYXDpDnUREyKn0bQ7fUO3g559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:Q03010	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-20070|uniprotkb:P87330|uniprotkb:D6W3M9|ensemblfungi:YPL139C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:ume1_yeast(display_long)|uniprotkb:UME1(gene name)|psi-mi:UME1(display_short)|uniprotkb:WTM3(gene name synonym)|uniprotkb:YPL139C(locus name)|uniprotkb:LPI7C(orf name)|uniprotkb:WD repeat-containing transcriptional modulator 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_015186.1|sgd:S000006060|ensemblfungi:YPL139C(gene)|ensemblfungi:YPL139C_mRNA(transcript)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006325"(chromatin organization)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0040020"(regulation of meiotic nuclear division)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|reactome:R-SCE-3214815|reactome:R-SCE-3214847|reactome:R-SCE-3214858|dip:DIP-5290N|mint:Q03010	-	crc64:34FFD72A7E7425DB	crc64:AA6F60448B7BCBA9	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:radf8gBaPrKRK281JuKAYZprO34559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P40505	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-16809|ensemblfungi:YIL084C|uniprotkb:D6VVK2	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:sds3_yeast(display_long)|uniprotkb:YIL084C(locus name)|uniprotkb:SDS3(gene name)|psi-mi:SDS3(display_short)|uniprotkb:Suppressor of defective silencing protein 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	ensemblfungi:YIL084C(gene)|ensemblfungi:YIL084C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006342"|go:"GO:0016575"(histone deacetylation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043709"(cell adhesion involved in single-species biofilm formation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070822"(Sin3-type complex)|go:"GO:2000217"(regulation of invasive growth in response to glucose limitation)|interpro:IPR013907(Sds3-like)|reactome:R-SCE-3214815|refseq:NP_012182.1|sgd:S000001346|dip:DIP-2706N|mint:P40505	-	crc64:34FFD72A7E7425DB	crc64:4A6186E68BFE0CC7	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:Ri0JEWQXqBHUb95AnRdMYEkSz+Y559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P22579	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189246|imex:IM-19229-1	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	-	crc64:34FFD72A7E7425DB	crc64:0834726312B13878	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believe this to be due to contamination from the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	intact-crc:5C85FFCE0CCA4566|rigid:/P95J1ECz2+53Jb73iAyGkdmwOE	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P39001	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-20086|uniprotkb:D6VSI8|ensemblfungi:YDR207C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:ume6_yeast(display_long)|uniprotkb:UME6(gene name)|psi-mi:UME6(display_short)|uniprotkb:CAR80(gene name synonym)|uniprotkb:CARGR1(gene name synonym)|uniprotkb:YDR207C(locus name)|uniprotkb:YD8142.04C(orf name)|uniprotkb:Unscheduled meiotic gene expression protein 6(gene name synonym)|uniprotkb:Negative transcriptional regulator of IME2(gene name synonym)|uniprotkb:Regulator of inducer of meiosis protein 16(gene name synonym)|uniprotkb:NIM2(gene name synonym)|uniprotkb:RIM16(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189327|imex:IM-19229-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_010493.1|sgd:S000002615|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009847"(spore germination)|go:"GO:0010673"(positive regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle)|go:"GO:0010674"(negative regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034389"(lipid droplet organization)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR001138(Fungal transcriptional regulatory protein, N-terminal)|interpro:IPR036864|rcsb pdb:6XAW|mint:P39001|ensemblfungi:YDR207C(gene)|ensemblfungi:YDR207C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001081"(nitrogen catabolite repression of transcription from RNA polymerase II promoter)|dip:DIP-959N	-	crc64:34FFD72A7E7425DB	crc64:0DDA0A6B4A157182	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:FYPIyvIh6lPIX4TSkGdpT47v/WM559292	intact-crc:4A4EEE2231334066|rigid:Qm/FBR+EgKWoSnpRWT5Tztwme0w	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:Q04779	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-28153|uniprotkb:D6VZP9|ensemblfungi:YMR075W	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:rco1_yeast(display_long)|uniprotkb:YM9916.14(orf name)|uniprotkb:YMR075W(locus name)|uniprotkb:RCO1(gene name)|psi-mi:RCO1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189327|imex:IM-19229-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_013791.1|sgd:S000004680|dip:DIP-1959N|mint:Q04779|ensemblfungi:YMR075W(gene)|ensemblfungi:YMR075W_mRNA(transcript)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0005634"(nucleus)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0060195"(negative regulation of antisense RNA transcription)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787	-	crc64:34FFD72A7E7425DB	crc64:CFC282DC9A782E5C	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:5TrczzmnA5cA2yFTxM2rueJyA8c559292	intact-crc:4A4EEE2231334066|rigid:Qm/FBR+EgKWoSnpRWT5Tztwme0w	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:Q03010	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-20070|uniprotkb:P87330|uniprotkb:D6W3M9|ensemblfungi:YPL139C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:ume1_yeast(display_long)|uniprotkb:UME1(gene name)|psi-mi:UME1(display_short)|uniprotkb:WTM3(gene name synonym)|uniprotkb:YPL139C(locus name)|uniprotkb:LPI7C(orf name)|uniprotkb:WD repeat-containing transcriptional modulator 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189327|imex:IM-19229-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_015186.1|sgd:S000006060|ensemblfungi:YPL139C(gene)|ensemblfungi:YPL139C_mRNA(transcript)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006325"(chromatin organization)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0040020"(regulation of meiotic nuclear division)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|reactome:R-SCE-3214815|reactome:R-SCE-3214847|reactome:R-SCE-3214858|dip:DIP-5290N|mint:Q03010	-	crc64:34FFD72A7E7425DB	crc64:AA6F60448B7BCBA9	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:radf8gBaPrKRK281JuKAYZprO34559292	intact-crc:4A4EEE2231334066|rigid:Qm/FBR+EgKWoSnpRWT5Tztwme0w	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:Q12432	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-6281|uniprotkb:D6W433|ensemblfungi:YPR023C	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:eaf3_yeast(display_long)|uniprotkb:EAF3(gene name)|psi-mi:EAF3(display_short)|uniprotkb:YPR023C(locus name)|uniprotkb:YP9367.03C(orf name)|uniprotkb:ESA1-associated factor 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189327|imex:IM-19229-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	refseq:NP_015348.1|sgd:S000006227|ensemblfungi:YPR023C(gene)|ensemblfungi:YPR023C_mRNA(transcript)|go:"GO:0000123"(histone acetyltransferase complex)|go:"GO:0006281"(DNA repair)|go:"GO:0006342"|dip:DIP-2871N|mint:Q12432|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016573"(histone acetylation)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0043487"(regulation of RNA stability)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0043968"(histone H2A acetylation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0060195"(negative regulation of antisense RNA transcription)|interpro:IPR000953(Chromo domain)|interpro:IPR008676(MRG)|interpro:IPR016197(Chromo domain-like)|interpro:IPR025995|interpro:IPR026541|interpro:IPR038217|rcsb pdb:2K3X|rcsb pdb:2K3Y|rcsb pdb:3E9F|rcsb pdb:3E9G|rcsb pdb:6K5W	-	crc64:34FFD72A7E7425DB	crc64:63758DE9510D70DC	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:20fPAcvnQSzI0ojylZ07IW3u5CI559292	intact-crc:4A4EEE2231334066|rigid:Qm/FBR+EgKWoSnpRWT5Tztwme0w	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P32561	uniprotkb:P22579	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189327|imex:IM-19229-2	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	-	crc64:34FFD72A7E7425DB	crc64:0834726312B13878	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	intact-crc:4A4EEE2231334066|rigid:Qm/FBR+EgKWoSnpRWT5Tztwme0w	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P40505	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-16809|ensemblfungi:YIL084C|uniprotkb:D6VVK2	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:sds3_yeast(display_long)|uniprotkb:YIL084C(locus name)|uniprotkb:SDS3(gene name)|psi-mi:SDS3(display_short)|uniprotkb:Suppressor of defective silencing protein 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	ensemblfungi:YIL084C(gene)|ensemblfungi:YIL084C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006342"|go:"GO:0016575"(histone deacetylation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0043709"(cell adhesion involved in single-species biofilm formation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070822"(Sin3-type complex)|go:"GO:2000217"(regulation of invasive growth in response to glucose limitation)|interpro:IPR013907(Sds3-like)|reactome:R-SCE-3214815|refseq:NP_012182.1|sgd:S000001346|dip:DIP-2706N|mint:P40505	-	crc64:0834726312B13878	crc64:4A6186E68BFE0CC7	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:Ri0JEWQXqBHUb95AnRdMYEkSz+Y559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P34233	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-3027|uniprotkb:D6VX15|ensemblfungi:YKL185W	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:ash1_yeast(display_long)|uniprotkb:ASH1(gene name)|psi-mi:ASH1(display_short)|uniprotkb:Daughter cells HO repressor protein(gene name synonym)|uniprotkb:YKL185W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_012736.1|sgd:S000001668|dip:DIP-8053N|mint:P34233|ensemblfungi:YKL185W(gene)|ensemblfungi:YKL185W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0005933"(cellular bud)|go:"GO:0006325"(chromatin organization)|go:"GO:0008270"(zinc ion binding)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:1900461"(positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter)|go:"GO:1900477"(negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter)|interpro:IPR000679(Zinc finger, GATA-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)	-	crc64:0834726312B13878	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:OKR/uOyZ4UWgJUNx3oB/PBhzfAc559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:Q07458	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-33895|uniprotkb:D6VRS3|ensemblfungi:YDL076C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:rxt3_yeast(display_long)|uniprotkb:RXT3(gene name)|psi-mi:RXT3(display_short)|uniprotkb:YDL076C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_010207.1|sgd:S000002234|mint:Q07458|dip:DIP-1797N|ensemblfungi:YDL076C(gene)|ensemblfungi:YDL076C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR013951(Histone deacetylation protein Rxt3)	-	crc64:0834726312B13878	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:6fTNwtXcJvNN0VTp4LQ9XhNtLq8559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P50947	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-28808|uniprotkb:Q45TZ9|uniprotkb:D6W183|ensemblfungi:YNL097C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:pho23_yeast(display_long)|uniprotkb:PHO23(gene name)|psi-mi:PHO23(display_short)|uniprotkb:N2205(orf name)|uniprotkb:YNL097C(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	sgd:S000005041|refseq:NP_014302.3|dip:DIP-4243N|mint:P50947|ensemblfungi:YNL097C(gene)|ensemblfungi:YNL097C_mRNA(transcript)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016573"(histone acetylation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0035064"(methylated histone binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|go:"GO:2001159"(regulation of protein localization by the Cvt pathway)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787|interpro:IPR024610|interpro:IPR028651|reactome:R-SCE-3214847|reactome:R-SCE-3899300|reactome:R-SCE-6804758|reactome:R-SCE-6811555	-	crc64:0834726312B13878	crc64:3BF7B519E77ED6EF	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:N8KCC01xvIWGV9jdfQ/ZzizkIws559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P38255	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-21537|uniprotkb:D6VQ96|ensemblfungi:YBR095C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:rxt2_yeast(display_long)|uniprotkb:YBR095C(locus name)|uniprotkb:YBR0822(orf name)|uniprotkb:RXT2(gene name)|psi-mi:RXT2(display_short)|uniprotkb:RAF60(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_009653.2|sgd:S000000299|mint:P38255|dip:DIP-6755N|ensemblfungi:YBR095C(gene)|ensemblfungi:YBR095C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016575"(histone deacetylation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:1990483"(Clr6 histone deacetylase complex I'')|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR013904(RXT2-like, N-terminal)|interpro:IPR039602	-	crc64:0834726312B13878	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:vyk+t+m5t/bXnmpMYfeVXe4I1W0559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P38429	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-27570|uniprotkb:Q03501|uniprotkb:D6W089|ensemblfungi:YMR263W	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:sap30_yeast(display_long)|uniprotkb:YM8156.05(orf name)|uniprotkb:YMR263W(locus name)|uniprotkb:SAP30(gene name)|psi-mi:SAP30(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_013990.1|sgd:S000004876|dip:DIP-3846N|mint:P38429|ensemblfungi:YMR263W(gene)|ensemblfungi:YMR263W_mRNA(transcript)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006325"(chromatin organization)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR024145|interpro:IPR025718|interpro:IPR038291|reactome:R-SCE-3214815	-	crc64:0834726312B13878	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:37Rq1e4YnQ0iYtV3Ax1RjddetpM559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:Q08923	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-33349|uniprotkb:Q6B1X3|uniprotkb:D6W3I7|ensemblfungi:YPL181W	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:cti6_yeast(display_long)|uniprotkb:Transcriptional regulatory protein CTI6(gene name synonym)|uniprotkb:CYC8-TUP1-interacting protein 6(gene name synonym)|uniprotkb:YPL181W(locus name)|uniprotkb:CTI6(gene name)|psi-mi:CTI6(display_short)|uniprotkb:RXT1(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_015144.1|sgd:S000006102|ensemblfungi:YPL181W(gene)|ensemblfungi:YPL181W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0008134"(transcription factor binding)|mint:Q08923|dip:DIP-2958N|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0035064"(methylated histone binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787	-	crc64:0834726312B13878	crc64:5123C56BB86ED991	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:cinec0yfaziNc2oeW6HGnp8fL60559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P31385	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-5755|uniprotkb:Q86ZS5|uniprotkb:D6VPK5|ensemblfungi:YAL013W	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:dep1_yeast(display_long)|uniprotkb:DEP1(gene name)|psi-mi:DEP1(display_short)|uniprotkb:FUN54(gene name synonym)|uniprotkb:YAL013W(locus name)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_009389.3|sgd:S000000011|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|ensemblfungi:YAL013W(gene)|ensemblfungi:YAL013W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|dip:DIP-5922N|mint:P31385|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR013907(Sds3-like)|reactome:R-SCE-3214815	-	crc64:0834726312B13878	-	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:85f0flYXDpDnUREyKn0bQ7fUO3g559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:Q03010	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-20070|uniprotkb:P87330|uniprotkb:D6W3M9|ensemblfungi:YPL139C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:ume1_yeast(display_long)|uniprotkb:UME1(gene name)|psi-mi:UME1(display_short)|uniprotkb:WTM3(gene name synonym)|uniprotkb:YPL139C(locus name)|uniprotkb:LPI7C(orf name)|uniprotkb:WD repeat-containing transcriptional modulator 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_015186.1|sgd:S000006060|ensemblfungi:YPL139C(gene)|ensemblfungi:YPL139C_mRNA(transcript)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006325"(chromatin organization)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0040020"(regulation of meiotic nuclear division)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|reactome:R-SCE-3214815|reactome:R-SCE-3214847|reactome:R-SCE-3214858|dip:DIP-5290N|mint:Q03010	-	crc64:0834726312B13878	crc64:AA6F60448B7BCBA9	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:radf8gBaPrKRK281JuKAYZprO34559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P32561	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189357|imex:IM-19229-3	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	-	crc64:0834726312B13878	crc64:34FFD72A7E7425DB	figure legend:Table 1|caution:Low levels of Eaf3 and Rco1 proteins were also detected but the authors believed this to be due to contamination by the small subunit.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	intact-crc:B24BBDD3F7C5A42E|rigid:mxpFeCifjvyQ0YGQX8PkUYJqr5s	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:Q03010	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-20070|uniprotkb:P87330|uniprotkb:D6W3M9|ensemblfungi:YPL139C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:ume1_yeast(display_long)|uniprotkb:UME1(gene name)|psi-mi:UME1(display_short)|uniprotkb:WTM3(gene name synonym)|uniprotkb:YPL139C(locus name)|uniprotkb:LPI7C(orf name)|uniprotkb:WD repeat-containing transcriptional modulator 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189378|imex:IM-19229-4	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_015186.1|sgd:S000006060|ensemblfungi:YPL139C(gene)|ensemblfungi:YPL139C_mRNA(transcript)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006325"(chromatin organization)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0040020"(regulation of meiotic nuclear division)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0070210"(Rpd3L-Expanded complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|reactome:R-SCE-3214815|reactome:R-SCE-3214847|reactome:R-SCE-3214858|dip:DIP-5290N|mint:Q03010	-	crc64:0834726312B13878	crc64:AA6F60448B7BCBA9	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:radf8gBaPrKRK281JuKAYZprO34559292	intact-crc:ED15DA5E736DAE12|rigid:fzeLVDsBvxIzedFJdWrYelnUWKc	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:Q04779	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-28153|uniprotkb:D6VZP9|ensemblfungi:YMR075W	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:rco1_yeast(display_long)|uniprotkb:YM9916.14(orf name)|uniprotkb:YMR075W(locus name)|uniprotkb:RCO1(gene name)|psi-mi:RCO1(display_short)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189378|imex:IM-19229-4	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_013791.1|sgd:S000004680|dip:DIP-1959N|mint:Q04779|ensemblfungi:YMR075W(gene)|ensemblfungi:YMR075W_mRNA(transcript)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0005634"(nucleus)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0060195"(negative regulation of antisense RNA transcription)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019786|interpro:IPR019787	-	crc64:0834726312B13878	crc64:CFC282DC9A782E5C	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:5TrczzmnA5cA2yFTxM2rueJyA8c559292	intact-crc:ED15DA5E736DAE12|rigid:fzeLVDsBvxIzedFJdWrYelnUWKc	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:Q12432	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-6281|uniprotkb:D6W433|ensemblfungi:YPR023C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:eaf3_yeast(display_long)|uniprotkb:EAF3(gene name)|psi-mi:EAF3(display_short)|uniprotkb:YPR023C(locus name)|uniprotkb:YP9367.03C(orf name)|uniprotkb:ESA1-associated factor 3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189378|imex:IM-19229-4	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	refseq:NP_015348.1|sgd:S000006227|ensemblfungi:YPR023C(gene)|ensemblfungi:YPR023C_mRNA(transcript)|go:"GO:0000123"(histone acetyltransferase complex)|go:"GO:0006281"(DNA repair)|go:"GO:0006342"|dip:DIP-2871N|mint:Q12432|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016573"(histone acetylation)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0043487"(regulation of RNA stability)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0043968"(histone H2A acetylation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0060195"(negative regulation of antisense RNA transcription)|interpro:IPR000953(Chromo domain)|interpro:IPR008676(MRG)|interpro:IPR016197(Chromo domain-like)|interpro:IPR025995|interpro:IPR026541|interpro:IPR038217|rcsb pdb:2K3X|rcsb pdb:2K3Y|rcsb pdb:3E9F|rcsb pdb:3E9G|rcsb pdb:6K5W	-	crc64:0834726312B13878	crc64:63758DE9510D70DC	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:20fPAcvnQSzI0ojylZ07IW3u5CI559292	intact-crc:ED15DA5E736DAE12|rigid:fzeLVDsBvxIzedFJdWrYelnUWKc	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)
uniprotkb:P22579	uniprotkb:P32561	intact:EBI-17160|uniprotkb:Q08049|ensemblfungi:YOL004W|uniprotkb:D6W263	intact:EBI-15864|uniprotkb:D6W0L7|ensemblfungi:YNL330C	psi-mi:sin3_yeast(display_long)|uniprotkb:YOL004W(locus name)|uniprotkb:GAM2(gene name synonym)|uniprotkb:RPD1(gene name synonym)|uniprotkb:SDI1(gene name synonym)|uniprotkb:SDS16(gene name synonym)|uniprotkb:UME4(gene name synonym)|uniprotkb:SIN3(gene name)|psi-mi:SIN3(display_short)|uniprotkb:CPE1(gene name synonym)	psi-mi:rpd3_yeast(display_long)|uniprotkb:RPD3(gene name)|psi-mi:RPD3(display_short)|uniprotkb:SDI2(gene name synonym)|uniprotkb:YNL330C(locus name)|uniprotkb:N0305(orf name)|uniprotkb:MOF6(gene name synonym)|uniprotkb:REC3(gene name synonym)|uniprotkb:SDS6(gene name synonym)|uniprotkb:Transcriptional regulatory protein RPD3(gene name synonym)	psi-mi:"MI:0676"(tandem affinity purification)	Florens et al. (2006)	pubmed:17101441|imex:IM-19229	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0914"(association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1189378|imex:IM-19229-4	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YOL004W(gene)|ensemblfungi:YOL004W_mRNA(transcript)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0016575"(histone deacetylation)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0051301"(cell division)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061408"(positive regulation of transcription from RNA polymerase II promoter in response to heat stress)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070550"(rDNA condensation)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR003822(Paired amphipathic helix)|interpro:IPR013194(Histone deacetylase interacting)|interpro:IPR031693|interpro:IPR036600|interpro:IPR039774|rcsb pdb:6XDJ|rcsb pdb:6XAW|refseq:NP_014639.1|sgd:S000005364|dip:DIP-597N|mint:P22579	ensemblfungi:YNL330C(gene)|ensemblfungi:YNL330C_mRNA(transcript)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000117"(regulation of transcription involved in G2/M transition of mitotic cell cycle)|go:"GO:0000118"(histone deacetylase complex)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0004407"(histone deacetylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016239"(positive regulation of macroautophagy)|go:"GO:0016479"(negative regulation of transcription by RNA polymerase I)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0032041"("NAD-dependent histone deacetylase activity (H3-K14 specific)")|go:"GO:0032221"(Rpd3S/Clr6-CII complex)|go:"GO:0033698"(Rpd3L complex)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034503"(protein localization to nucleolar rDNA repeats)|go:"GO:0044804"(autophagy of nucleus)|go:"GO:0045128"(negative regulation of reciprocal meiotic recombination)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051038"(negative regulation of transcription involved in meiotic cell cycle)|go:"GO:0061186"(negative regulation of silent mating-type cassette heterochromatin assembly)|go:"GO:0061188"(negative regulation of ribosomal DNA heterochromatin assembly)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070210"(Rpd3L-Expanded complex)|go:"GO:0070211"(Snt2C complex)|go:"GO:0070933"(histone H4 deacetylation)|go:"GO:0070550"(rDNA condensation)|interpro:IPR000286(Histone deacetylase superfamily)|interpro:IPR003084(Histone deacetylase)|interpro:IPR023696|interpro:IPR023801|interpro:IPR037138|reactome:R-SCE-3214815|reactome:R-SCE-4551638|reactome:R-SCE-9018519|go:"GO:0070822"(Sin3-type complex)|go:"GO:0070932"(histone H3 deacetylation)|refseq:NP_014069.1|sgd:S000005274|dip:DIP-681N|mint:P32561	-	crc64:0834726312B13878	crc64:34FFD72A7E7425DB	figure legend:Table 1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/01/29	2014/10/16	rogid:6qsGcTahoTQo/AMso/5xKmpyVPk559292	rogid:GQ1xB56fpHiVV03yhoPADv04fl0559292	intact-crc:ED15DA5E736DAE12|rigid:fzeLVDsBvxIzedFJdWrYelnUWKc	false	calmodulin binding peptide plus protein a tag:?-?	-	-	-	psi-mi:"MI:0658"(multidimensional protein identification technology)	psi-mi:"MI:0658"(multidimensional protein identification technology)