#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P43254	uniprotkb:Q9FE22	intact:EBI-301649|uniprotkb:O23974|uniprotkb:O23975|uniprotkb:O48770|ensemblplants:AT2G32950.1|uniprotkb:Q1JPL6	intact:EBI-626001|uniprotkb:Q9FZ26|ensemblplants:AT1G02340.1|uniprotkb:Q8GZ25	psi-mi:cop1_arath(display_long)|uniprotkb:COP1(gene name)|psi-mi:COP1(display_short)|uniprotkb:Constitutive photomorphogenesis protein 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase COP1(gene name synonym)|uniprotkb:T21L14.11(orf name)|uniprotkb:At2g32950(locus name)	psi-mi:hfr1_arath(display_long)|uniprotkb:Transcription factor EN 68(gene name synonym)|uniprotkb:bHLH transcription factor bHLH026(gene name synonym)|uniprotkb:HFR1(gene name)|psi-mi:HFR1(display_short)|uniprotkb:BHLH26(gene name synonym)|uniprotkb:EN68(gene name synonym)|uniprotkb:Basic helix-loop-helix protein 26(gene name synonym)|uniprotkb:Reduced sensitivity to far-red light(gene name synonym)|uniprotkb:Protein LONG HYPOCOTYL IN FAR-RED 1(gene name synonym)|uniprotkb:FBI1(gene name synonym)|uniprotkb:Protein REDUCED PHYTOCHROME SIGNALING(gene name synonym)|uniprotkb:REP1(gene name synonym)|uniprotkb:RSF1(gene name synonym)|uniprotkb:At1g02340(locus name)|uniprotkb:T6A9.4(orf name)|uniprotkb:T6A9_13(orf name)	psi-mi:"MI:0663"(confocal microscopy)	Jang et al. (2005)	pubmed:15741320	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0403"(colocalization)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1543467	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	mint:P43254|ensemblplants:AT2G32950(gene)|ensemblplants:AT2G32950.1(transcript)|go:"GO:0000152"(nuclear ubiquitin ligase complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009641"(shade avoidance)|go:"GO:0009647"(skotomorphogenesis)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0046283"(anthocyanin-containing compound metabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR017907|interpro:IPR019775|interpro:IPR036322|interpro:IPR042755|rcsb pdb:5IGO|rcsb pdb:5KWN|rcsb pdb:6QTO|rcsb pdb:6QTQ|rcsb pdb:6QTR|rcsb pdb:6QTS|rcsb pdb:6QTT|rcsb pdb:6QTU|rcsb pdb:6QTV|rcsb pdb:6QTW|rcsb pdb:6QTX|refseq:NP_180854.1|dip:DIP-32850N	ensemblplants:AT1G02340(gene)|ensemblplants:AT1G02340.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009642"(response to light intensity)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0010218"(response to far red light)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6QTV|go:"GO:0009785"(blue light signaling pathway)|refseq:NP_563650.1|interpro:IPR011598(Helix-loop-helix DNA-binding)|mint:Q9FE22|interpro:IPR036638|interpro:IPR031066	go:"GO:0005634"(nucleus)	-	-	figure legend:1	taxid:4679(allce)|taxid:4679("Allium cepa (Onion)")	-	2007/10/05	2014/10/16	rogid:73stYlIzphnYjTII2gab3+DD60E3702	rogid:+Fbb3Lom6LwpbE+VdnLrFiLpWis3702	intact-crc:F158508FB0EBA5BC|rigid:CwyOGcAWiEMtD3D3uwIah68prtI	false	cyan fluorescent protein tag:?-?	yellow fluorescent protein tag:?-?|sufficient binding region:?-?	-	-	psi-mi:"MI:0866"(tag visualisation)	psi-mi:"MI:0866"(tag visualisation)
uniprotkb:Q9FE22	uniprotkb:P43254	intact:EBI-626001|uniprotkb:Q9FZ26|ensemblplants:AT1G02340.1|uniprotkb:Q8GZ25	intact:EBI-301649|uniprotkb:O23974|uniprotkb:O23975|uniprotkb:O48770|ensemblplants:AT2G32950.1|uniprotkb:Q1JPL6	psi-mi:hfr1_arath(display_long)|uniprotkb:Transcription factor EN 68(gene name synonym)|uniprotkb:bHLH transcription factor bHLH026(gene name synonym)|uniprotkb:HFR1(gene name)|psi-mi:HFR1(display_short)|uniprotkb:BHLH26(gene name synonym)|uniprotkb:EN68(gene name synonym)|uniprotkb:Basic helix-loop-helix protein 26(gene name synonym)|uniprotkb:Reduced sensitivity to far-red light(gene name synonym)|uniprotkb:Protein LONG HYPOCOTYL IN FAR-RED 1(gene name synonym)|uniprotkb:FBI1(gene name synonym)|uniprotkb:Protein REDUCED PHYTOCHROME SIGNALING(gene name synonym)|uniprotkb:REP1(gene name synonym)|uniprotkb:RSF1(gene name synonym)|uniprotkb:At1g02340(locus name)|uniprotkb:T6A9.4(orf name)|uniprotkb:T6A9_13(orf name)	psi-mi:cop1_arath(display_long)|uniprotkb:COP1(gene name)|psi-mi:COP1(display_short)|uniprotkb:Constitutive photomorphogenesis protein 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase COP1(gene name synonym)|uniprotkb:T21L14.11(orf name)|uniprotkb:At2g32950(locus name)	psi-mi:"MI:0018"(two hybrid)	Jang et al. (2005)	pubmed:15741320	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1543485	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblplants:AT1G02340(gene)|ensemblplants:AT1G02340.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009642"(response to light intensity)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0010218"(response to far red light)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6QTV|go:"GO:0009785"(blue light signaling pathway)|refseq:NP_563650.1|interpro:IPR011598(Helix-loop-helix DNA-binding)|mint:Q9FE22|interpro:IPR036638|interpro:IPR031066	mint:P43254|ensemblplants:AT2G32950(gene)|ensemblplants:AT2G32950.1(transcript)|go:"GO:0000152"(nuclear ubiquitin ligase complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009641"(shade avoidance)|go:"GO:0009647"(skotomorphogenesis)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0046283"(anthocyanin-containing compound metabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR017907|interpro:IPR019775|interpro:IPR036322|interpro:IPR042755|rcsb pdb:5IGO|rcsb pdb:5KWN|rcsb pdb:6QTO|rcsb pdb:6QTQ|rcsb pdb:6QTR|rcsb pdb:6QTS|rcsb pdb:6QTT|rcsb pdb:6QTU|rcsb pdb:6QTV|rcsb pdb:6QTW|rcsb pdb:6QTX|refseq:NP_180854.1|dip:DIP-32850N	-	-	-	figure legend:2A	taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)")	-	2007/10/05	2014/10/16	rogid:+Fbb3Lom6LwpbE+VdnLrFiLpWis3702	rogid:73stYlIzphnYjTII2gab3+DD60E3702	intact-crc:04857832C04D148A|rigid:CwyOGcAWiEMtD3D3uwIah68prtI	false	necessary binding region:1-131	necessary binding region:216-675	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P43254	uniprotkb:Q9FE22	intact:EBI-301649|uniprotkb:O23974|uniprotkb:O23975|uniprotkb:O48770|ensemblplants:AT2G32950.1|uniprotkb:Q1JPL6	intact:EBI-626001|uniprotkb:Q9FZ26|ensemblplants:AT1G02340.1|uniprotkb:Q8GZ25	psi-mi:cop1_arath(display_long)|uniprotkb:COP1(gene name)|psi-mi:COP1(display_short)|uniprotkb:Constitutive photomorphogenesis protein 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase COP1(gene name synonym)|uniprotkb:T21L14.11(orf name)|uniprotkb:At2g32950(locus name)	psi-mi:hfr1_arath(display_long)|uniprotkb:Transcription factor EN 68(gene name synonym)|uniprotkb:bHLH transcription factor bHLH026(gene name synonym)|uniprotkb:HFR1(gene name)|psi-mi:HFR1(display_short)|uniprotkb:BHLH26(gene name synonym)|uniprotkb:EN68(gene name synonym)|uniprotkb:Basic helix-loop-helix protein 26(gene name synonym)|uniprotkb:Reduced sensitivity to far-red light(gene name synonym)|uniprotkb:Protein LONG HYPOCOTYL IN FAR-RED 1(gene name synonym)|uniprotkb:FBI1(gene name synonym)|uniprotkb:Protein REDUCED PHYTOCHROME SIGNALING(gene name synonym)|uniprotkb:REP1(gene name synonym)|uniprotkb:RSF1(gene name synonym)|uniprotkb:At1g02340(locus name)|uniprotkb:T6A9.4(orf name)|uniprotkb:T6A9_13(orf name)	psi-mi:"MI:0096"(pull down)	Jang et al. (2005)	pubmed:15741320	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1543506	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	mint:P43254|ensemblplants:AT2G32950(gene)|ensemblplants:AT2G32950.1(transcript)|go:"GO:0000152"(nuclear ubiquitin ligase complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009641"(shade avoidance)|go:"GO:0009647"(skotomorphogenesis)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0046283"(anthocyanin-containing compound metabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR017907|interpro:IPR019775|interpro:IPR036322|interpro:IPR042755|rcsb pdb:5IGO|rcsb pdb:5KWN|rcsb pdb:6QTO|rcsb pdb:6QTQ|rcsb pdb:6QTR|rcsb pdb:6QTS|rcsb pdb:6QTT|rcsb pdb:6QTU|rcsb pdb:6QTV|rcsb pdb:6QTW|rcsb pdb:6QTX|refseq:NP_180854.1|dip:DIP-32850N	ensemblplants:AT1G02340(gene)|ensemblplants:AT1G02340.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009642"(response to light intensity)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0010218"(response to far red light)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6QTV|go:"GO:0009785"(blue light signaling pathway)|refseq:NP_563650.1|interpro:IPR011598(Helix-loop-helix DNA-binding)|mint:Q9FE22|interpro:IPR036638|interpro:IPR031066	-	-	-	figure legend:2B	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2007/10/05	2014/10/16	rogid:73stYlIzphnYjTII2gab3+DD60E3702	rogid:+Fbb3Lom6LwpbE+VdnLrFiLpWis3702	intact-crc:64203AD6650030F5|rigid:CwyOGcAWiEMtD3D3uwIah68prtI	false	glutathione s tranferase tag:?-?|necessary binding region:216-675	maltose binding protein tag:?-?|necessary binding region:1-131	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P43254	uniprotkb:Q9FE22	intact:EBI-301649|uniprotkb:O23974|uniprotkb:O23975|uniprotkb:O48770|ensemblplants:AT2G32950.1|uniprotkb:Q1JPL6	intact:EBI-626001|uniprotkb:Q9FZ26|ensemblplants:AT1G02340.1|uniprotkb:Q8GZ25	psi-mi:cop1_arath(display_long)|uniprotkb:COP1(gene name)|psi-mi:COP1(display_short)|uniprotkb:Constitutive photomorphogenesis protein 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase COP1(gene name synonym)|uniprotkb:T21L14.11(orf name)|uniprotkb:At2g32950(locus name)	psi-mi:hfr1_arath(display_long)|uniprotkb:Transcription factor EN 68(gene name synonym)|uniprotkb:bHLH transcription factor bHLH026(gene name synonym)|uniprotkb:HFR1(gene name)|psi-mi:HFR1(display_short)|uniprotkb:BHLH26(gene name synonym)|uniprotkb:EN68(gene name synonym)|uniprotkb:Basic helix-loop-helix protein 26(gene name synonym)|uniprotkb:Reduced sensitivity to far-red light(gene name synonym)|uniprotkb:Protein LONG HYPOCOTYL IN FAR-RED 1(gene name synonym)|uniprotkb:FBI1(gene name synonym)|uniprotkb:Protein REDUCED PHYTOCHROME SIGNALING(gene name synonym)|uniprotkb:REP1(gene name synonym)|uniprotkb:RSF1(gene name synonym)|uniprotkb:At1g02340(locus name)|uniprotkb:T6A9.4(orf name)|uniprotkb:T6A9_13(orf name)	psi-mi:"MI:0007"(anti tag coimmunoprecipitation)	Jang et al. (2005)	pubmed:15741320	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1543526	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	mint:P43254|ensemblplants:AT2G32950(gene)|ensemblplants:AT2G32950.1(transcript)|go:"GO:0000152"(nuclear ubiquitin ligase complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009641"(shade avoidance)|go:"GO:0009647"(skotomorphogenesis)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0046283"(anthocyanin-containing compound metabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR017907|interpro:IPR019775|interpro:IPR036322|interpro:IPR042755|rcsb pdb:5IGO|rcsb pdb:5KWN|rcsb pdb:6QTO|rcsb pdb:6QTQ|rcsb pdb:6QTR|rcsb pdb:6QTS|rcsb pdb:6QTT|rcsb pdb:6QTU|rcsb pdb:6QTV|rcsb pdb:6QTW|rcsb pdb:6QTX|refseq:NP_180854.1|dip:DIP-32850N	ensemblplants:AT1G02340(gene)|ensemblplants:AT1G02340.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009642"(response to light intensity)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0010218"(response to far red light)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6QTV|go:"GO:0009785"(blue light signaling pathway)|refseq:NP_563650.1|interpro:IPR011598(Helix-loop-helix DNA-binding)|mint:Q9FE22|interpro:IPR036638|interpro:IPR031066	-	-	-	figure legend:2C|comment:Degradation of HFR1 was achieved using treatment of transgenic plants with the  proteasomal inhibitor MG132.|caution:"The coimmunoprecipitation of HFR1 was low the authors conclude that this could be explained by \"(1) Only a minor proportion of the total cellular HFR1-3HA was associated with COP1-6Myc, and (2) the interaction between COP1-6Myc and HFR13HA may be weak, and did not survive the stringent wash conditions used in our experiments\"."	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/10/05	2014/10/16	rogid:73stYlIzphnYjTII2gab3+DD60E3702	rogid:+Fbb3Lom6LwpbE+VdnLrFiLpWis3702	intact-crc:C093E8C634AFA6C4|rigid:CwyOGcAWiEMtD3D3uwIah68prtI	false	myc tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0113"(western blot)	psi-mi:"MI:0113"(western blot)
uniprotkb:P43254	uniprotkb:Q9FE22	intact:EBI-301649|uniprotkb:O23974|uniprotkb:O23975|uniprotkb:O48770|ensemblplants:AT2G32950.1|uniprotkb:Q1JPL6	intact:EBI-626001|uniprotkb:Q9FZ26|ensemblplants:AT1G02340.1|uniprotkb:Q8GZ25	psi-mi:cop1_arath(display_long)|uniprotkb:COP1(gene name)|psi-mi:COP1(display_short)|uniprotkb:Constitutive photomorphogenesis protein 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase COP1(gene name synonym)|uniprotkb:T21L14.11(orf name)|uniprotkb:At2g32950(locus name)	psi-mi:hfr1_arath(display_long)|uniprotkb:Transcription factor EN 68(gene name synonym)|uniprotkb:bHLH transcription factor bHLH026(gene name synonym)|uniprotkb:HFR1(gene name)|psi-mi:HFR1(display_short)|uniprotkb:BHLH26(gene name synonym)|uniprotkb:EN68(gene name synonym)|uniprotkb:Basic helix-loop-helix protein 26(gene name synonym)|uniprotkb:Reduced sensitivity to far-red light(gene name synonym)|uniprotkb:Protein LONG HYPOCOTYL IN FAR-RED 1(gene name synonym)|uniprotkb:FBI1(gene name synonym)|uniprotkb:Protein REDUCED PHYTOCHROME SIGNALING(gene name synonym)|uniprotkb:REP1(gene name synonym)|uniprotkb:RSF1(gene name synonym)|uniprotkb:At1g02340(locus name)|uniprotkb:T6A9.4(orf name)|uniprotkb:T6A9_13(orf name)	psi-mi:"MI:0415"(enzymatic study)	Jang et al. (2005)	pubmed:15741320	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0220"(ubiquitination reaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1543543	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0501"(enzyme)	psi-mi:"MI:0502"(enzyme target)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	mint:P43254|ensemblplants:AT2G32950(gene)|ensemblplants:AT2G32950.1(transcript)|go:"GO:0000152"(nuclear ubiquitin ligase complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009641"(shade avoidance)|go:"GO:0009647"(skotomorphogenesis)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0046283"(anthocyanin-containing compound metabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR017907|interpro:IPR019775|interpro:IPR036322|interpro:IPR042755|rcsb pdb:5IGO|rcsb pdb:5KWN|rcsb pdb:6QTO|rcsb pdb:6QTQ|rcsb pdb:6QTR|rcsb pdb:6QTS|rcsb pdb:6QTT|rcsb pdb:6QTU|rcsb pdb:6QTV|rcsb pdb:6QTW|rcsb pdb:6QTX|refseq:NP_180854.1|dip:DIP-32850N	ensemblplants:AT1G02340(gene)|ensemblplants:AT1G02340.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009642"(response to light intensity)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0010218"(response to far red light)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6QTV|go:"GO:0009785"(blue light signaling pathway)|refseq:NP_563650.1|interpro:IPR011598(Helix-loop-helix DNA-binding)|mint:Q9FE22|interpro:IPR036638|interpro:IPR031066	-	-	-	figure legend:3|resulting-ptm:ubiquitination of HFR1|caution:The source organism of the unbiquitin used in this study was not given. The protein was purchased from Sigma which list a number ubiquitin products from different source organisms. Therefore ubiquiyin does not appear in the interaction , although implied by the interaction type annotation.	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/10/05	2014/10/16	rogid:73stYlIzphnYjTII2gab3+DD60E3702	rogid:+Fbb3Lom6LwpbE+VdnLrFiLpWis3702	intact-crc:15F8B6C1556DD62F|rigid:TZzJsC381941E6ncXdKTCRd9XR8	false	-	maltose binding protein tag:?-?|sufficient binding region:1-131	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P43254	uniprotkb:P62837	intact:EBI-301649|uniprotkb:O23974|uniprotkb:O23975|uniprotkb:O48770|ensemblplants:AT2G32950.1|uniprotkb:Q1JPL6	intact:EBI-347677|uniprotkb:P51669|uniprotkb:Q3MN78|uniprotkb:D3DQC9|uniprotkb:Q96RP6|ensembl:ENSP00000381717|ensembl:ENSP00000381718	psi-mi:cop1_arath(display_long)|uniprotkb:COP1(gene name)|psi-mi:COP1(display_short)|uniprotkb:Constitutive photomorphogenesis protein 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase COP1(gene name synonym)|uniprotkb:T21L14.11(orf name)|uniprotkb:At2g32950(locus name)	psi-mi:ub2d2_human(display_long)|uniprotkb:UBC5B(gene name synonym)|uniprotkb:UBCH4(gene name synonym)|uniprotkb:UBE2D2(gene name)|psi-mi:UBE2D2(display_short)|uniprotkb:UBC4(gene name synonym)|uniprotkb:UBCH5B(gene name synonym)|uniprotkb:Ubiquitin-protein ligase D2(gene name synonym)|uniprotkb:Ubiquitin carrier protein D2(gene name synonym)|uniprotkb:Ubiquitin-conjugating enzyme E2-17 kDa 2(gene name synonym)|uniprotkb:"Ubiquitin-conjugating enzyme E2(17)KB 2"(gene name synonym)|uniprotkb:PUBC1(gene name synonym)|uniprotkb:p53-regulated ubiquitin-conjugating enzyme 1(gene name synonym)|uniprotkb:"(E3-independent) E2 ubiquitin-conjugating enzyme D2"(gene name synonym)|uniprotkb:E2 ubiquitin-conjugating enzyme D2(gene name synonym)	psi-mi:"MI:0415"(enzymatic study)	Jang et al. (2005)	pubmed:15741320	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:9606(human)|taxid:9606(Homo sapiens)	psi-mi:"MI:0220"(ubiquitination reaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1543543	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0501"(enzyme)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	mint:P43254|ensemblplants:AT2G32950(gene)|ensemblplants:AT2G32950.1(transcript)|go:"GO:0000152"(nuclear ubiquitin ligase complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009641"(shade avoidance)|go:"GO:0009647"(skotomorphogenesis)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0046283"(anthocyanin-containing compound metabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR017907|interpro:IPR019775|interpro:IPR036322|interpro:IPR042755|rcsb pdb:5IGO|rcsb pdb:5KWN|rcsb pdb:6QTO|rcsb pdb:6QTQ|rcsb pdb:6QTR|rcsb pdb:6QTS|rcsb pdb:6QTT|rcsb pdb:6QTU|rcsb pdb:6QTV|rcsb pdb:6QTW|rcsb pdb:6QTX|refseq:NP_180854.1|dip:DIP-32850N	refseq:NP_003330.1|refseq:NP_862821.1|dip:DIP-29267N|ensembl:ENSG00000131508(gene)|ensembl:ENST00000398733(transcript)|ensembl:ENST00000398734(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0032991"(protein-containing complex)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070936"(protein K48-linked ubiquitination)|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|interpro:IPR023313|mint:P62837|rcsb pdb:1UR6|rcsb pdb:1W4U|rcsb pdb:2CLW|rcsb pdb:2ESK|rcsb pdb:2ESO|rcsb pdb:2ESP|rcsb pdb:2ESQ|rcsb pdb:3A33|rcsb pdb:3JVZ|rcsb pdb:3JW0|rcsb pdb:3L1Y|rcsb pdb:3TGD|rcsb pdb:3ZNI|rcsb pdb:4A49|rcsb pdb:4A4B|rcsb pdb:4A4C|rcsb pdb:4AUQ|rcsb pdb:4DDG|rcsb pdb:4DDI|rcsb pdb:4LDT|rcsb pdb:4V3K|rcsb pdb:4V3L|rcsb pdb:4WZ3|rcsb pdb:5D0K|rcsb pdb:5D0M|rcsb pdb:5D1K|rcsb pdb:5D1L|rcsb pdb:5D1M|rcsb pdb:5EDV|rcsb pdb:5MNJ|rcsb pdb:5ULF|rcsb pdb:5ULH|rcsb pdb:5ULK|rcsb pdb:5VZW|rcsb pdb:5ZBU|rcsb pdb:6HPR|rcsb pdb:6M2C|rcsb pdb:6SQO|rcsb pdb:6SQR|rcsb pdb:6SQS|rcsb pdb:6TTU|rcsb pdb:6W7Z|rcsb pdb:6W9D|rcsb pdb:7AI0|rcsb pdb:7AI1|rcsb pdb:7BOL|reactome:R-HSA-1234176|reactome:R-HSA-168927|reactome:R-HSA-202424|reactome:R-HSA-2871837|reactome:R-HSA-5607764|reactome:R-HSA-8866652|reactome:R-HSA-8866654|reactome:R-HSA-8951664|reactome:R-HSA-9033241|reactome:R-HSA-936440|reactome:R-HSA-937041|reactome:R-HSA-9705462|reactome:R-HSA-983168	-	-	-	figure legend:3|resulting-ptm:ubiquitination of HFR1|caution:The source organism of the unbiquitin used in this study was not given. The protein was purchased from Sigma which list a number ubiquitin products from different source organisms. Therefore ubiquiyin does not appear in the interaction , although implied by the interaction type annotation.	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/10/05	2014/10/16	rogid:73stYlIzphnYjTII2gab3+DD60E3702	rogid:vVGrEi0osU/WG0Y9qRCFMT4lgvg9606	intact-crc:15F8B6C1556DD62F|rigid:TZzJsC381941E6ncXdKTCRd9XR8	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P43254	uniprotkb:Q29504	intact:EBI-301649|uniprotkb:O23974|uniprotkb:O23975|uniprotkb:O48770|ensemblplants:AT2G32950.1|uniprotkb:Q1JPL6	intact:EBI-975625	psi-mi:cop1_arath(display_long)|uniprotkb:COP1(gene name)|psi-mi:COP1(display_short)|uniprotkb:Constitutive photomorphogenesis protein 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase COP1(gene name synonym)|uniprotkb:T21L14.11(orf name)|uniprotkb:At2g32950(locus name)	psi-mi:uba1_rabit(display_long)|uniprotkb:Ubiquitin-activating enzyme E1(gene name synonym)|uniprotkb:UBA1(gene name)|psi-mi:UBA1(display_short)|uniprotkb:UBE1(gene name synonym)	psi-mi:"MI:0415"(enzymatic study)	Jang et al. (2005)	pubmed:15741320	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:9986(rabit)|taxid:9986("Oryctolagus cuniculus (Rabbit)")	psi-mi:"MI:0220"(ubiquitination reaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1543543	-	psi-mi:"MI:1060"(spoke expansion)	psi-mi:"MI:0501"(enzyme)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0684"(ancillary)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	mint:P43254|ensemblplants:AT2G32950(gene)|ensemblplants:AT2G32950.1(transcript)|go:"GO:0000152"(nuclear ubiquitin ligase complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009641"(shade avoidance)|go:"GO:0009647"(skotomorphogenesis)|go:"GO:0009649"(entrainment of circadian clock)|go:"GO:0010119"(regulation of stomatal movement)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0046283"(anthocyanin-containing compound metabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0048573"(photoperiodism, flowering)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR017907|interpro:IPR019775|interpro:IPR036322|interpro:IPR042755|rcsb pdb:5IGO|rcsb pdb:5KWN|rcsb pdb:6QTO|rcsb pdb:6QTQ|rcsb pdb:6QTR|rcsb pdb:6QTS|rcsb pdb:6QTT|rcsb pdb:6QTU|rcsb pdb:6QTV|rcsb pdb:6QTW|rcsb pdb:6QTX|refseq:NP_180854.1|dip:DIP-32850N	go:"GO:0004839"(ubiquitin activating enzyme activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|interpro:IPR042302|refseq:NP_001075840.1|interpro:IPR000594(UBA/THIF-type NAD/FAD binding fold)|interpro:IPR018965|interpro:IPR019572|interpro:IPR018075|interpro:IPR018074|interpro:IPR000011(Ubiquitin-activating enzyme, E1)|interpro:IPR038252|interpro:IPR033127|interpro:IPR032418|interpro:IPR032420|interpro:IPR042449|interpro:IPR035985|interpro:IPR042063	-	-	-	figure legend:3|resulting-ptm:ubiquitination of HFR1|caution:The source organism of the unbiquitin used in this study was not given. The protein was purchased from Sigma which list a number ubiquitin products from different source organisms. Therefore ubiquiyin does not appear in the interaction , although implied by the interaction type annotation.	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/10/05	2014/10/16	rogid:73stYlIzphnYjTII2gab3+DD60E3702	rogid:kBSF1JlX6FGGw2Fs4klp7fFz5cQ9986	intact-crc:15F8B6C1556DD62F|rigid:TZzJsC381941E6ncXdKTCRd9XR8	false	-	-	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)