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                <shortLabel>IntAct</shortLabel>
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                <attribute name="url">http://www.ebi.ac.uk/</attribute>
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                <names>
                    <shortLabel>reverter-2005-1</shortLabel>
                    <fullName>Structure of a complex between Nedd8 and the Ulp/Senp protease family member Den1.</fullName>
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                            <fullName>In vitro</fullName>
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                        <shortLabel>x-ray diffraction</shortLabel>
                        <fullName>x-ray crystallography</fullName>
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                <participantIdentificationMethod>
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                        <shortLabel>predetermined</shortLabel>
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                <attributeList>
                    <attribute name="author-list" nameAc="MI:0636">Reverter D., Wu K., Erdene TG., Pan ZQ., Wilkinson KD., Lima CD.</attribute>
                    <attribute name="dataset" nameAc="MI:0875">PDBe - Data obtained from the Protein Data Bank Europe</attribute>
                    <attribute name="journal" nameAc="MI:0885">J. Mol. Biol. (0022-2836)</attribute>
                    <attribute name="publication year" nameAc="MI:0886">2005</attribute>
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                <names>
                    <shortLabel>senp8_human</shortLabel>
                    <fullName>Sentrin-specific protease 8</fullName>
                    <alias typeAc="MI:0301" type="gene name">SENP8</alias>
                    <alias typeAc="MI:0302" type="gene name synonym">DEN1</alias>
                    <alias typeAc="MI:0302" type="gene name synonym">NEDP1</alias>
                    <alias typeAc="MI:0302" type="gene name synonym">PRSC2</alias>
                    <alias typeAc="MI:0306" type="orf name">FKSG8</alias>
                    <alias typeAc="MI:0302" type="gene name synonym">Sentrin/SUMO-specific protease SENP8</alias>
                    <alias typeAc="MI:0302" type="gene name synonym">Protease, cysteine 2</alias>
                    <alias typeAc="MI:0302" type="gene name synonym">NEDD8-specific protease 1</alias>
                    <alias typeAc="MI:0302" type="gene name synonym">Deneddylase-1</alias>
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                    <shortLabel>nedd8-senp8-1</shortLabel>
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                                <shortLabel>unspecified role</shortLabel>
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                                    <shortLabel>region</shortLabel>
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                                        <end position="212"/>
                                        <isLink>false</isLink>
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                                </featureRangeList>
                            </feature>
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                        <hostOrganismList>
                            <hostOrganism ncbiTaxId="83333">
                                <names>
                                    <shortLabel>ecoli</shortLabel>
                                    <fullName>Escherichia coli (strain K12)</fullName>
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                            <attribute name="comment" nameAc="MI:0612">Stoichiometry: 1.0</attribute>
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                        </names>
                        <xref>
                            <primaryRef db="intact" dbAc="MI:0469" id="EBI-1041227" refType="identity" refTypeAc="MI:0356"/>
                        </xref>
                        <interactorRef>515442</interactorRef>
                        <biologicalRole>
                            <names>
                                <shortLabel>unspecified role</shortLabel>
                                <fullName>unspecified role</fullName>
                            </names>
                            <xref>
                                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                            </xref>
                        </biologicalRole>
                        <experimentalRoleList>
                            <experimentalRole>
                                <names>
                                    <shortLabel>neutral component</shortLabel>
                                    <fullName>neutral component</fullName>
                                </names>
                                <xref>
                                    <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0497" refType="identity" refTypeAc="MI:0356"/>
                                    <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                                    <secondaryRef db="intact" dbAc="MI:0469" id="EBI-55" refType="identity" refTypeAc="MI:0356"/>
                                </xref>
                            </experimentalRole>
                        </experimentalRoleList>
                        <featureList>
                            <feature id="515447">
                                <names>
                                    <shortLabel>region</shortLabel>
                                </names>
                                <xref>
                                    <primaryRef db="intact" dbAc="MI:0469" id="EBI-1041228" refType="identity" refTypeAc="MI:0356"/>
                                </xref>
                                <featureType>
                                    <names>
                                        <shortLabel>sufficient to bind</shortLabel>
                                        <fullName>sufficient binding region</fullName>
                                        <alias typeAc="MI:1041" type="synonym">sufficient to bind</alias>
                                    </names>
                                    <xref>
                                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0442" refType="identity" refTypeAc="MI:0356"/>
                                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608899" refType="identity" refTypeAc="MI:0356"/>
                                    </xref>
                                </featureType>
                                <featureRangeList>
                                    <featureRange>
                                        <startStatus>
                                            <names>
                                                <shortLabel>certain</shortLabel>
                                                <fullName>certain sequence position</fullName>
                                                <alias typeAc="MI:1041" type="synonym">certain</alias>
                                            </names>
                                            <xref>
                                                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0335" refType="identity" refTypeAc="MI:0356"/>
                                                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-540564" refType="identity" refTypeAc="MI:0356"/>
                                                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                                            </xref>
                                        </startStatus>
                                        <begin position="1"/>
                                        <endStatus>
                                            <names>
                                                <shortLabel>certain</shortLabel>
                                                <fullName>certain sequence position</fullName>
                                                <alias typeAc="MI:1041" type="synonym">certain</alias>
                                            </names>
                                            <xref>
                                                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0335" refType="identity" refTypeAc="MI:0356"/>
                                                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-540564" refType="identity" refTypeAc="MI:0356"/>
                                                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                                            </xref>
                                        </endStatus>
                                        <end position="76"/>
                                        <isLink>false</isLink>
                                    </featureRange>
                                </featureRangeList>
                            </feature>
                        </featureList>
                        <hostOrganismList>
                            <hostOrganism ncbiTaxId="83333">
                                <names>
                                    <shortLabel>ecoli</shortLabel>
                                    <fullName>Escherichia coli (strain K12)</fullName>
                                </names>
                            </hostOrganism>
                        </hostOrganismList>
                        <attributeList>
                            <attribute name="comment" nameAc="MI:0612">Stoichiometry: 1.0</attribute>
                        </attributeList>
                    </participant>
                </participantList>
                <interactionType>
                    <names>
                        <shortLabel>direct interaction</shortLabel>
                        <fullName>direct interaction</fullName>
                    </names>
                    <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608833" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                    </xref>
                </interactionType>
                <modelled>false</modelled>
                <intraMolecular>false</intraMolecular>
                <negative>false</negative>
                <attributeList>
                    <attribute name="assembly">dimeric, multimeric</attribute>
                    <attribute name="3d-r-factors" nameAc="MI:0631">working 79.100%, free 74.100%</attribute>
                    <attribute name="3d-resolution" nameAc="MI:0632">2.2A</attribute>
                </attributeList>
            </interaction>
        </interactionList>
    </entry>
</entrySet>
