Ontology Comparison Report
==========================

Files used:
file 1 (old): gene_ontology_edit.obo.2006-12-01; date: 30:11:2006 16:32; CVS revision: 5.54
file 2 (new): gene_ontology_edit.obo.2007-01-01; date: 21:12:2006 16:06; CVS revision: 5.72
subset: goslim_generic


New terms
=========
KEY:columns are separated by tabs
ID	name	namespace	nearest GO slim parent terms

GO:0000507	1-acylglycerophosphocholine O-acyltransferase	molecular_function	GO:0016740	
GO:0000508	Rpd3L complex	cellular_component	GO:0005654, GO:0043234	
GO:0000509	Rpd3S complex	cellular_component	GO:0005654, GO:0043234	
GO:0010313	phytochrome binding	molecular_function	GO:0005515	
GO:0010314	phosphatidylinositol-5-phosphate binding	molecular_function	GO:0008289	
GO:0010315	auxin efflux	biological_process	GO:0006810, GO:0007582	
GO:0010316	pyrophosphate-dependent phosphofructokinase complex	cellular_component	GO:0043234	
GO:0010317	pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex	cellular_component	GO:0043234	
GO:0010318	pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	cellular_component	GO:0043234	
GO:0010319	stromule	cellular_component	GO:0005575, GO:0009536	
GO:0010320	arginine/lysine endopeptidase activity	molecular_function	GO:0008233	
GO:0010321	regulation of vegetative phase change	biological_process	GO:0007275, GO:0050789	
GO:0010322	regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway	biological_process	GO:0006629, GO:0009058, GO:0050789	
GO:0010323	negative regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway	biological_process	GO:0006629, GO:0009058, GO:0050789	
GO:0032479	regulation of interferon type I production	biological_process	GO:0007582	
GO:0032480	negative regulation of interferon type I production	biological_process	GO:0007582	
GO:0032481	positive regulation of interferon type I production	biological_process	GO:0007582	
GO:0032482	Rab protein signal transduction	biological_process	GO:0007165	
GO:0032483	regulation of Rab protein signal transduction	biological_process	GO:0007165, GO:0050789	
GO:0032484	Ral protein signal transduction	biological_process	GO:0007165	
GO:0032485	regulation of Ral protein signal transduction	biological_process	GO:0007165, GO:0050789	
GO:0032486	Rap protein signal transduction	biological_process	GO:0007165	
GO:0032487	regulation of Rap protein signal transduction	biological_process	GO:0007165, GO:0050789	
GO:0032488	Cdc42 protein signal transduction	biological_process	GO:0007165	
GO:0032489	regulation of Cdc42 protein signal transduction	biological_process	GO:0007165, GO:0050789	
GO:0032490	detection of molecule of bacterial origin	biological_process	GO:0007582, GO:0009607	
GO:0032491	detection of molecule of fungal origin	biological_process	GO:0007582, GO:0009607	
GO:0032492	detection of molecule of oomycetes origin	biological_process	GO:0007582, GO:0009607	
GO:0032493	response to bacterial lipoprotein	biological_process	GO:0009607	
GO:0032494	response to peptidoglycan	biological_process	GO:0009607	
GO:0032495	response to muramyl dipeptide	biological_process	GO:0009607	
GO:0032496	response to lipopolysaccharide	biological_process	GO:0009607	
GO:0032497	detection of lipopolysaccharide	biological_process	GO:0007582, GO:0009607	
GO:0032498	detection of muramyl dipeptide	biological_process	GO:0007582, GO:0009607	
GO:0032499	detection of peptidoglycan	biological_process	GO:0007582, GO:0009607	
GO:0032500	muramyl dipeptide binding	molecular_function	GO:0005488	
GO:0032601	connective tissue growth factor production	biological_process	GO:0007582	
GO:0032602	chemokine production	biological_process	GO:0007582	
GO:0032603	fractalkine production	biological_process	GO:0007582	
GO:0032604	granulocyte macrophage colony-stimulating factor production	biological_process	GO:0007582	
GO:0032605	hepatocyte growth factor production	biological_process	GO:0007582	
GO:0032606	interferon type I production	biological_process	GO:0007582	
GO:0032607	interferon-alpha production	biological_process	GO:0007582	
GO:0032608	interferon-beta production	biological_process	GO:0007582	
GO:0032609	interferon-gamma production	biological_process	GO:0007582	
GO:0032610	interleukin-1 alpha production	biological_process	GO:0007582	
GO:0032611	interleukin-1 beta production	biological_process	GO:0007582	
GO:0032612	interleukin-1 production	biological_process	GO:0007582	
GO:0032613	interleukin-10 production	biological_process	GO:0007582	
GO:0032614	interleukin-11 production	biological_process	GO:0007582	
GO:0032615	interleukin-12 production	biological_process	GO:0007582	
GO:0032616	interleukin-13 production	biological_process	GO:0007582	
GO:0032617	interleukin-14 production	biological_process	GO:0007582	
GO:0032618	interleukin-15 production	biological_process	GO:0007582	
GO:0032619	interleukin-16 production	biological_process	GO:0007582	
GO:0032620	interleukin-17 production	biological_process	GO:0007582	
GO:0032621	interleukin-18 production	biological_process	GO:0007582	
GO:0032622	interleukin-19 production	biological_process	GO:0007582	
GO:0032623	interleukin-2 production	biological_process	GO:0007582	
GO:0032624	interleukin-20 production	biological_process	GO:0007582	
GO:0032625	interleukin-21 production	biological_process	GO:0007582	
GO:0032626	interleukin-22 production	biological_process	GO:0007582	
GO:0032627	interleukin-23 production	biological_process	GO:0007582	
GO:0032628	interleukin-24 production	biological_process	GO:0007582	
GO:0032629	interleukin-25 production	biological_process	GO:0007582	
GO:0032630	interleukin-26 production	biological_process	GO:0007582	
GO:0032631	interleukin-27 production	biological_process	GO:0007582	
GO:0032632	interleukin-3 production	biological_process	GO:0007582	
GO:0032633	interleukin-4 production	biological_process	GO:0007582	
GO:0032634	interleukin-5 production	biological_process	GO:0007582	
GO:0032635	interleukin-6 production	biological_process	GO:0007582	
GO:0032636	interleukin-7 production	biological_process	GO:0007582	
GO:0032637	interleukin-8 production	biological_process	GO:0007582	
GO:0032638	interleukin-9 production	biological_process	GO:0007582	
GO:0032639	TRAIL production	biological_process	GO:0007582	
GO:0032640	tumor necrosis factor-alpha production	biological_process	GO:0007582	
GO:0032641	tumor necrosis factor-beta production	biological_process	GO:0007582	
GO:0032642	regulation of chemokine production	biological_process	GO:0007582	
GO:0032643	regulation of connective tissue growth factor production	biological_process	GO:0007582	
GO:0032644	regulation of fractalkine production	biological_process	GO:0007582	
GO:0032645	regulation of granulocyte macrophage colony-stimulating factor production	biological_process	GO:0007582	
GO:0032646	regulation of hepatocyte growth factor production	biological_process	GO:0007582	
GO:0032647	regulation of interferon-alpha production	biological_process	GO:0007582	
GO:0032648	regulation of interferon-beta production	biological_process	GO:0007582	
GO:0032649	regulation of interferon-gamma production	biological_process	GO:0007582	
GO:0032650	regulation of interleukin-1 alpha production	biological_process	GO:0007582	
GO:0032651	regulation of interleukin-1 beta production	biological_process	GO:0007582	
GO:0032652	regulation of interleukin-1 production	biological_process	GO:0007582	
GO:0032653	regulation of interleukin-10 production	biological_process	GO:0007582	
GO:0032654	regulation of interleukin-11 production	biological_process	GO:0007582	
GO:0032655	regulation of interleukin-12 production	biological_process	GO:0007582	
GO:0032656	regulation of interleukin-13 production	biological_process	GO:0007582	
GO:0032657	regulation of interleukin-14 production	biological_process	GO:0007582	
GO:0032658	regulation of interleukin-15 production	biological_process	GO:0007582	
GO:0032659	regulation of interleukin-16 production	biological_process	GO:0007582	
GO:0032660	regulation of interleukin-17 production	biological_process	GO:0007582	
GO:0032661	regulation of interleukin-18 production	biological_process	GO:0007582	
GO:0032662	regulation of interleukin-19 production	biological_process	GO:0007582	
GO:0032663	regulation of interleukin-2 production	biological_process	GO:0007582	
GO:0032664	regulation of interleukin-20 production	biological_process	GO:0007582	
GO:0032665	regulation of interleukin-21 production	biological_process	GO:0007582	
GO:0032666	regulation of interleukin-22 production	biological_process	GO:0007582	
GO:0032667	regulation of interleukin-23 production	biological_process	GO:0007582	
GO:0032668	regulation of interleukin-24 production	biological_process	GO:0007582	
GO:0032669	regulation of interleukin-25 production	biological_process	GO:0007582	
GO:0032670	regulation of interleukin-26 production	biological_process	GO:0007582	
GO:0032671	regulation of interleukin-27 production	biological_process	GO:0007582	
GO:0032672	regulation of interleukin-3 production	biological_process	GO:0007582	
GO:0032673	regulation of interleukin-4 production	biological_process	GO:0007582	
GO:0032674	regulation of interleukin-5 production	biological_process	GO:0007582	
GO:0032675	regulation of interleukin-6 production	biological_process	GO:0007582	
GO:0032676	regulation of interleukin-7 production	biological_process	GO:0007582	
GO:0032677	regulation of interleukin-8 production	biological_process	GO:0007582	
GO:0032678	regulation of interleukin-9 production	biological_process	GO:0007582	
GO:0032679	regulation of TRAIL production	biological_process	GO:0007582	
GO:0032680	regulation of tumor necrosis factor-alpha production	biological_process	GO:0007582	
GO:0032681	regulation of tumor necrosis factor-beta production	biological_process	GO:0007582	
GO:0032682	negative regulation of chemokine production	biological_process	GO:0007582	
GO:0032683	negative regulation of connective tissue growth factor production	biological_process	GO:0007582	
GO:0032684	negative regulation of fractalkine production	biological_process	GO:0007582	
GO:0032685	negative regulation of granulocyte macrophage colony-stimulating factor production	biological_process	GO:0007582	
GO:0032686	negative regulation of hepatocyte growth factor production	biological_process	GO:0007582	
GO:0032687	negative regulation of interferon-alpha production	biological_process	GO:0007582	
GO:0032688	negative regulation of interferon-beta production	biological_process	GO:0007582	
GO:0032689	negative regulation of interferon-gamma production	biological_process	GO:0007582	
GO:0032690	negative regulation of interleukin-1 alpha production	biological_process	GO:0007582	
GO:0032691	negative regulation of interleukin-1 beta production	biological_process	GO:0007582	
GO:0032692	negative regulation of interleukin-1 production	biological_process	GO:0007582	
GO:0032693	negative regulation of interleukin-10 production	biological_process	GO:0007582	
GO:0032694	negative regulation of interleukin-11 production	biological_process	GO:0007582	
GO:0032695	negative regulation of interleukin-12 production	biological_process	GO:0007582	
GO:0032696	negative regulation of interleukin-13 production	biological_process	GO:0007582	
GO:0032697	negative regulation of interleukin-14 production	biological_process	GO:0007582	
GO:0032698	negative regulation of interleukin-15 production	biological_process	GO:0007582	
GO:0032699	negative regulation of interleukin-16 production	biological_process	GO:0007582	
GO:0032700	negative regulation of interleukin-17 production	biological_process	GO:0007582	
GO:0032701	negative regulation of interleukin-18 production	biological_process	GO:0007582	
GO:0032702	negative regulation of interleukin-19 production	biological_process	GO:0007582	
GO:0032703	negative regulation of interleukin-2 production	biological_process	GO:0007582	
GO:0032704	negative regulation of interleukin-20 production	biological_process	GO:0007582	
GO:0032705	negative regulation of interleukin-21 production	biological_process	GO:0007582	
GO:0032706	negative regulation of interleukin-22 production	biological_process	GO:0007582	
GO:0032707	negative regulation of interleukin-23 production	biological_process	GO:0007582	
GO:0032708	negative regulation of interleukin-24 production	biological_process	GO:0007582	
GO:0032709	negative regulation of interleukin-25 production	biological_process	GO:0007582	
GO:0032710	negative regulation of interleukin-26 production	biological_process	GO:0007582	
GO:0032711	negative regulation of interleukin-27 production	biological_process	GO:0007582	
GO:0032712	negative regulation of interleukin-3 production	biological_process	GO:0007582	
GO:0032713	negative regulation of interleukin-4 production	biological_process	GO:0007582	
GO:0032714	negative regulation of interleukin-5 production	biological_process	GO:0007582	
GO:0032715	negative regulation of interleukin-6 production	biological_process	GO:0007582	
GO:0032716	negative regulation of interleukin-7 production	biological_process	GO:0007582	
GO:0032717	negative regulation of interleukin-8 production	biological_process	GO:0007582	
GO:0032718	negative regulation of interleukin-9 production	biological_process	GO:0007582	
GO:0032719	negative regulation of TRAIL production	biological_process	GO:0007582	
GO:0032720	negative regulation of tumor necrosis factor-alpha production	biological_process	GO:0007582	
GO:0032721	negative regulation of tumor necrosis factor-beta production	biological_process	GO:0007582	
GO:0032722	positive regulation of chemokine production	biological_process	GO:0007582	
GO:0032723	positive regulation of connective tissue growth factor production	biological_process	GO:0007582	
GO:0032724	positive regulation of fractalkine production	biological_process	GO:0007582	
GO:0032725	positive regulation of granulocyte macrophage colony-stimulating factor production	biological_process	GO:0007582	
GO:0032726	positive regulation of hepatocyte growth factor production	biological_process	GO:0007582	
GO:0032727	positive regulation of interferon-alpha production	biological_process	GO:0007582	
GO:0032728	positive regulation of interferon-beta production	biological_process	GO:0007582	
GO:0032729	positive regulation of interferon-gamma production	biological_process	GO:0007582	
GO:0032730	positive regulation of interleukin-1 alpha production	biological_process	GO:0007582	
GO:0032731	positive regulation of interleukin-1 beta production	biological_process	GO:0007582	
GO:0032732	positive regulation of interleukin-1 production	biological_process	GO:0007582	
GO:0032733	positive regulation of interleukin-10 production	biological_process	GO:0007582	
GO:0032734	positive regulation of interleukin-11 production	biological_process	GO:0007582	
GO:0032735	positive regulation of interleukin-12 production	biological_process	GO:0007582	
GO:0032736	positive regulation of interleukin-13 production	biological_process	GO:0007582	
GO:0032737	positive regulation of interleukin-14 production	biological_process	GO:0007582	
GO:0032738	positive regulation of interleukin-15 production	biological_process	GO:0007582	
GO:0032739	positive regulation of interleukin-16 production	biological_process	GO:0007582	
GO:0032740	positive regulation of interleukin-17 production	biological_process	GO:0007582	
GO:0032741	positive regulation of interleukin-18 production	biological_process	GO:0007582	
GO:0032742	positive regulation of interleukin-19 production	biological_process	GO:0007582	
GO:0032743	positive regulation of interleukin-2 production	biological_process	GO:0007582	
GO:0032744	positive regulation of interleukin-20 production	biological_process	GO:0007582	
GO:0032745	positive regulation of interleukin-21 production	biological_process	GO:0007582	
GO:0032746	positive regulation of interleukin-22 production	biological_process	GO:0007582	
GO:0032747	positive regulation of interleukin-23 production	biological_process	GO:0007582	
GO:0032748	positive regulation of interleukin-24 production	biological_process	GO:0007582	
GO:0032749	positive regulation of interleukin-25 production	biological_process	GO:0007582	
GO:0032750	positive regulation of interleukin-26 production	biological_process	GO:0007582	
GO:0032751	positive regulation of interleukin-27 production	biological_process	GO:0007582	
GO:0032752	positive regulation of interleukin-3 production	biological_process	GO:0007582	
GO:0032753	positive regulation of interleukin-4 production	biological_process	GO:0007582	
GO:0032754	positive regulation of interleukin-5 production	biological_process	GO:0007582	
GO:0032755	positive regulation of interleukin-6 production	biological_process	GO:0007582	
GO:0032756	positive regulation of interleukin-7 production	biological_process	GO:0007582	
GO:0032757	positive regulation of interleukin-8 production	biological_process	GO:0007582	
GO:0032758	positive regulation of interleukin-9 production	biological_process	GO:0007582	
GO:0032759	positive regulation of TRAIL production	biological_process	GO:0007582	
GO:0032760	positive regulation of tumor necrosis factor-alpha production	biological_process	GO:0007582	
GO:0032761	positive regulation of tumor necrosis factor-beta production	biological_process	GO:0007582	
GO:0032762	mast cell cytokine production	biological_process	GO:0007582	
GO:0032763	regulation of mast cytokine production	biological_process	GO:0007582, GO:0050789	
GO:0032764	negative regulation of mast cytokine production	biological_process	GO:0007582, GO:0050789	
GO:0032765	positive regulation of mast cytokine production	biological_process	GO:0007582, GO:0050789	
GO:0032766	NHE3/E3KARP/ACTN4 complex	cellular_component	GO:0005623, GO:0043234	
GO:0032767	copper-dependent protein binding	molecular_function	GO:0005515	
GO:0032768	regulation of monooxygenase activity	biological_process	GO:0050789	
GO:0032769	negative regulation of monooxygenase activity	biological_process	GO:0050789	
GO:0032770	positive regulation of monooxygenase activity	biological_process	GO:0050789	
GO:0032771	regulation of monophenol oxygenase activity	biological_process	GO:0050789	
GO:0032772	negative regulation of monophenol oxygenase activity	biological_process	GO:0050789	
GO:0032773	positive regulation of monophenol oxygenase activity	biological_process	GO:0050789	
GO:0032774	RNA biosynthesis	biological_process	GO:0006139	
GO:0032775	DNA methylation on adenine	biological_process	GO:0006259, GO:0040029	
GO:0032776	DNA methylation on cytosine	biological_process	GO:0006259, GO:0040029	
GO:0032777	Piccolo NuA4 histone acetyltransferase complex	cellular_component	GO:0005654, GO:0043234	
GO:0032778	cobalt-transporting ATPase activity	molecular_function	GO:0005215, GO:0016787	
GO:0032779	copper-induced intracellular protein transport	biological_process	GO:0015031, GO:0016043	
GO:0032780	negative regulation of ATPase activity	biological_process	GO:0050789	
GO:0032781	positive regulation of ATPase activity	biological_process	GO:0050789	
GO:0032782	bile acid secretion	biological_process	GO:0007582	
GO:0032783	ELL-EAF complex	cellular_component	GO:0005654, GO:0043234	
GO:0060013	righting reflex	biological_process	GO:0009605	
GO:0060014	granulosa cell differentiation	biological_process	GO:0007275, GO:0030154	
GO:0060015	granulosa cell fate commitment	biological_process	GO:0030154	
GO:0060016	granulosa cell development	biological_process	GO:0030154	
GO:0060017	parathyroid gland development	biological_process	GO:0007275	
GO:0060018	astrocyte fate commitment	biological_process	GO:0030154	
GO:0060019	radial glial cell differentiation	biological_process	GO:0007275, GO:0030154	
GO:0060020	Bergmann glial cell differentiation	biological_process	GO:0007275, GO:0030154	


Obsoletions
===========
GO:0006299, short patch mismatch repair system: 'short patch' is a relative statements, often used ambiguously, and does not necessarily represent a process; te processes it can stand for are base excision repair, nucleotide excision repair, transcription-coupled nucleotide excision repair, and mismatch repair. To update annotations, consider the biological process terms 'base excision repair ; GO:0006284' and 'nucleotide excision repair ; GO:0006289'.


Term merges
===========
GO:0006300 was merged into GO:0006298, mismatch repair


Term name changes
=================
GO:0002237: response to bacterium associated molecule --> response to molecule of bacterial origin
GO:0002238: response to fungus associated molecule --> response to molecule of fungal origin
GO:0002240: response to oomycetes associated molecule --> response to molecule of oomycetes origin
GO:0021861: radial glial cell differentiation --> radial glial cell differentiation in the forebrain
GO:0021865: symmetric radial glial cell division --> symmetric radial glial cell division in the forebrain
GO:0022023: radial glial cell fate commitment --> radial glial cell fate commitment in the forebrain
GO:0035267: TIP60 histone acetyltransferase complex --> NuA4 histone acetyltransferase complex


Subset Changes
==============

Subset term alterations
None

Term movement between subsets

Term movements under GO:0005215, transporter activity
+ GO:0032778, cobalt-transporting ATPase activity

Term movements under GO:0005488, binding
+ GO:0032500, muramyl dipeptide binding

Term movements under GO:0005515, protein binding
+ GO:0010313, phytochrome binding
+ GO:0032767, copper-dependent protein binding

Term movements under GO:0005575, cellular_component
+ GO:0010319, stromule

Term movements under GO:0005622, intracellular
+ GO:0008043, ferritin complex

Term movements under GO:0005623, cell
+ GO:0032766, NHE3/E3KARP/ACTN4 complex

Term movements under GO:0005654, nucleoplasm
+ GO:0000508, Rpd3L complex
+ GO:0000509, Rpd3S complex
+ GO:0032777, Piccolo NuA4 histone acetyltransferase complex
+ GO:0032783, ELL-EAF complex

Term movements under GO:0005941, unlocalized protein complex
- GO:0008043, ferritin complex

Term movements under GO:0006139, nucleobase, nucleoside, nucleotide and nucleic acid metabolism
+ GO:0032774, RNA biosynthesis
+ GO:0006269, DNA replication, synthesis of RNA primer
+ GO:0043137, DNA replication, removal of RNA primer

Term movements under GO:0006259, DNA metabolism
- GO:0006300, alt id for GO:0006298, mismatch repair
- GO:0006299, short patch mismatch repair system
+ GO:0032776, DNA methylation on cytosine
+ GO:0032775, DNA methylation on adenine

Term movements under GO:0006629, lipid metabolism
+ GO:0010323, negative regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway
+ GO:0010322, regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway

Term movements under GO:0006810, transport
+ GO:0010315, auxin efflux

Term movements under GO:0006950, response to stress
- GO:0006300, alt id for GO:0006298, mismatch repair
- GO:0006299, short patch mismatch repair system

Term movements under GO:0007165, signal transduction
+ GO:0032317, regulation of Rap GTPase activity
+ GO:0032484, Ral protein signal transduction
+ GO:0032316, regulation of Ran GTPase activity
+ GO:0043088, regulation of Cdc42 GTPase activity
+ GO:0032485, regulation of Ral protein signal transduction
+ GO:0032482, Rab protein signal transduction
+ GO:0032315, regulation of Ral GTPase activity
+ GO:0032312, regulation of ARF GTPase activity
+ GO:0032318, regulation of Ras GTPase activity
+ GO:0032488, Cdc42 protein signal transduction
+ GO:0032483, regulation of Rab protein signal transduction
+ GO:0032487, regulation of Rap protein signal transduction
+ GO:0032319, regulation of Rho GTPase activity
+ GO:0032320, positive regulation of Ras GTPase activity
+ GO:0032313, regulation of Rab GTPase activity
+ GO:0032314, regulation of Rac GTPase activity
+ GO:0032489, regulation of Cdc42 protein signal transduction
+ GO:0032321, positive regulation of Rho GTPase activity
+ GO:0043089, positive regulation of Cdc42 GTPase activity
+ GO:0032486, Rap protein signal transduction

Term movements under GO:0007275, development
- GO:0021896, forebrain astrocyte differentiation
- GO:0032474, otolith morphogenesis
- GO:0032475, otolith formation
+ GO:0060014, granulosa cell differentiation
+ GO:0010321, regulation of vegetative phase change
+ GO:0060017, parathyroid gland development
+ GO:0060019, radial glial cell differentiation
+ GO:0060020, Bergmann glial cell differentiation

Term movements under GO:0007582, physiological process
+ GO:0032481, positive regulation of interferon type I production
+ GO:0032762, mast cell cytokine production
+ GO:0032696, negative regulation of interleukin-13 production
+ GO:0032680, regulation of tumor necrosis factor-alpha production
+ GO:0032656, regulation of interleukin-13 production
+ GO:0032647, regulation of interferon-alpha production
+ GO:0032651, regulation of interleukin-1 beta production
+ GO:0032760, positive regulation of tumor necrosis factor-alpha production
+ GO:0032615, interleukin-12 production
+ GO:0032679, regulation of TRAIL production
+ GO:0032709, negative regulation of interleukin-25 production
+ GO:0032754, positive regulation of interleukin-5 production
+ GO:0032654, regulation of interleukin-11 production
+ GO:0032732, positive regulation of interleukin-1 production
+ GO:0032738, positive regulation of interleukin-15 production
+ GO:0032673, regulation of interleukin-4 production
+ GO:0032625, interleukin-21 production
+ GO:0032609, interferon-gamma production
+ GO:0032670, regulation of interleukin-26 production
+ GO:0032662, regulation of interleukin-19 production
+ GO:0032745, positive regulation of interleukin-21 production
+ GO:0032704, negative regulation of interleukin-20 production
+ GO:0032733, positive regulation of interleukin-10 production
+ GO:0032607, interferon-alpha production
+ GO:0032492, detection of molecule of oomycetes origin
+ GO:0032618, interleukin-15 production
+ GO:0032611, interleukin-1 beta production
+ GO:0032692, negative regulation of interleukin-1 production
+ GO:0032669, regulation of interleukin-25 production
+ GO:0032665, regulation of interleukin-21 production
+ GO:0032690, negative regulation of interleukin-1 alpha production
+ GO:0032747, positive regulation of interleukin-23 production
+ GO:0032713, negative regulation of interleukin-4 production
+ GO:0032765, positive regulation of mast cytokine production
+ GO:0032700, negative regulation of interleukin-17 production
+ GO:0032621, interleukin-18 production
+ GO:0032723, positive regulation of connective tissue growth factor production
+ GO:0032499, detection of peptidoglycan
+ GO:0032706, negative regulation of interleukin-22 production
+ GO:0032724, positive regulation of fractalkine production
+ GO:0032736, positive regulation of interleukin-13 production
+ GO:0032633, interleukin-4 production
+ GO:0032697, negative regulation of interleukin-14 production
+ GO:0032758, positive regulation of interleukin-9 production
+ GO:0032677, regulation of interleukin-8 production
+ GO:0032606, interferon type I production
+ GO:0032657, regulation of interleukin-14 production
+ GO:0032710, negative regulation of interleukin-26 production
+ GO:0032740, positive regulation of interleukin-17 production
+ GO:0032685, negative regulation of granulocyte macrophage colony-stimulating factor production
+ GO:0032749, positive regulation of interleukin-25 production
+ GO:0032646, regulation of hepatocyte growth factor production
+ GO:0032687, negative regulation of interferon-alpha production
+ GO:0032729, positive regulation of interferon-gamma production
+ GO:0032684, negative regulation of fractalkine production
+ GO:0032731, positive regulation of interleukin-1 beta production
+ GO:0032699, negative regulation of interleukin-16 production
+ GO:0032490, detection of molecule of bacterial origin
+ GO:0032638, interleukin-9 production
+ GO:0032714, negative regulation of interleukin-5 production
+ GO:0032631, interleukin-27 production
+ GO:0032725, positive regulation of granulocyte macrophage colony-stimulating factor production
+ GO:0032602, chemokine production
+ GO:0032764, negative regulation of mast cytokine production
+ GO:0032717, negative regulation of interleukin-8 production
+ GO:0032622, interleukin-19 production
+ GO:0032752, positive regulation of interleukin-3 production
+ GO:0032612, interleukin-1 production
+ GO:0032759, positive regulation of TRAIL production
+ GO:0032734, positive regulation of interleukin-11 production
+ GO:0032648, regulation of interferon-beta production
+ GO:0032720, negative regulation of tumor necrosis factor-alpha production
+ GO:0032498, detection of muramyl dipeptide
+ GO:0032675, regulation of interleukin-6 production
+ GO:0032604, granulocyte macrophage colony-stimulating factor production
+ GO:0032743, positive regulation of interleukin-2 production
+ GO:0032610, interleukin-1 alpha production
+ GO:0032632, interleukin-3 production
+ GO:0032636, interleukin-7 production
+ GO:0032623, interleukin-2 production
+ GO:0032698, negative regulation of interleukin-15 production
+ GO:0032658, regulation of interleukin-15 production
+ GO:0032628, interleukin-24 production
+ GO:0032756, positive regulation of interleukin-7 production
+ GO:0032641, tumor necrosis factor-beta production
+ GO:0032727, positive regulation of interferon-alpha production
+ GO:0032694, negative regulation of interleukin-11 production
+ GO:0032616, interleukin-13 production
+ GO:0032664, regulation of interleukin-20 production
+ GO:0032667, regulation of interleukin-23 production
+ GO:0032643, regulation of connective tissue growth factor production
+ GO:0032689, negative regulation of interferon-gamma production
+ GO:0032705, negative regulation of interleukin-21 production
+ GO:0032634, interleukin-5 production
+ GO:0032619, interleukin-16 production
+ GO:0032624, interleukin-20 production
+ GO:0032715, negative regulation of interleukin-6 production
+ GO:0032666, regulation of interleukin-22 production
+ GO:0032711, negative regulation of interleukin-27 production
+ GO:0032753, positive regulation of interleukin-4 production
+ GO:0032708, negative regulation of interleukin-24 production
+ GO:0032639, TRAIL production
+ GO:0032640, tumor necrosis factor-alpha production
+ GO:0032721, negative regulation of tumor necrosis factor-beta production
+ GO:0032674, regulation of interleukin-5 production
+ GO:0032614, interleukin-11 production
+ GO:0032642, regulation of chemokine production
+ GO:0032763, regulation of mast cytokine production
+ GO:0032750, positive regulation of interleukin-26 production
+ GO:0032739, positive regulation of interleukin-16 production
+ GO:0032661, regulation of interleukin-18 production
+ GO:0032671, regulation of interleukin-27 production
+ GO:0032693, negative regulation of interleukin-10 production
+ GO:0032695, negative regulation of interleukin-12 production
+ GO:0032701, negative regulation of interleukin-18 production
+ GO:0032746, positive regulation of interleukin-22 production
+ GO:0032718, negative regulation of interleukin-9 production
+ GO:0032703, negative regulation of interleukin-2 production
+ GO:0032637, interleukin-8 production
+ GO:0032613, interleukin-10 production
+ GO:0032761, positive regulation of tumor necrosis factor-beta production
+ GO:0010315, auxin efflux
+ GO:0032620, interleukin-17 production
+ GO:0032707, negative regulation of interleukin-23 production
+ GO:0032682, negative regulation of chemokine production
+ GO:0032626, interleukin-22 production
+ GO:0032712, negative regulation of interleukin-3 production
+ GO:0032630, interleukin-26 production
+ GO:0032722, positive regulation of chemokine production
+ GO:0032650, regulation of interleukin-1 alpha production
+ GO:0032479, regulation of interferon type I production
+ GO:0032659, regulation of interleukin-16 production
+ GO:0032691, negative regulation of interleukin-1 beta production
+ GO:0032672, regulation of interleukin-3 production
+ GO:0032603, fractalkine production
+ GO:0032617, interleukin-14 production
+ GO:0032678, regulation of interleukin-9 production
+ GO:0032681, regulation of tumor necrosis factor-beta production
+ GO:0032782, bile acid secretion
+ GO:0032676, regulation of interleukin-7 production
+ GO:0032497, detection of lipopolysaccharide
+ GO:0032702, negative regulation of interleukin-19 production
+ GO:0032757, positive regulation of interleukin-8 production
+ GO:0032686, negative regulation of hepatocyte growth factor production
+ GO:0032627, interleukin-23 production
+ GO:0032629, interleukin-25 production
+ GO:0032605, hepatocyte growth factor production
+ GO:0032652, regulation of interleukin-1 production
+ GO:0032649, regulation of interferon-gamma production
+ GO:0032755, positive regulation of interleukin-6 production
+ GO:0032726, positive regulation of hepatocyte growth factor production
+ GO:0032645, regulation of granulocyte macrophage colony-stimulating factor production
+ GO:0032491, detection of molecule of fungal origin
+ GO:0032730, positive regulation of interleukin-1 alpha production
+ GO:0032744, positive regulation of interleukin-20 production
+ GO:0032741, positive regulation of interleukin-18 production
+ GO:0032735, positive regulation of interleukin-12 production
+ GO:0032668, regulation of interleukin-24 production
+ GO:0032601, connective tissue growth factor production
+ GO:0032748, positive regulation of interleukin-24 production
+ GO:0032660, regulation of interleukin-17 production
+ GO:0032644, regulation of fractalkine production
+ GO:0032716, negative regulation of interleukin-7 production
+ GO:0032751, positive regulation of interleukin-27 production
+ GO:0032653, regulation of interleukin-10 production
+ GO:0032719, negative regulation of TRAIL production
+ GO:0032728, positive regulation of interferon-beta production
+ GO:0032663, regulation of interleukin-2 production
+ GO:0032635, interleukin-6 production
+ GO:0032737, positive regulation of interleukin-14 production
+ GO:0032683, negative regulation of connective tissue growth factor production
+ GO:0032608, interferon-beta production
+ GO:0032742, positive regulation of interleukin-19 production
+ GO:0032480, negative regulation of interferon type I production
+ GO:0032655, regulation of interleukin-12 production
+ GO:0032688, negative regulation of interferon-beta production

Term movements under GO:0008233, peptidase activity
+ GO:0010320, arginine/lysine endopeptidase activity

Term movements under GO:0008289, lipid binding
+ GO:0010314, phosphatidylinositol-5-phosphate binding

Term movements under GO:0009056, catabolism
+ GO:0043137, DNA replication, removal of RNA primer

Term movements under GO:0009058, biosynthesis
+ GO:0010323, negative regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway
+ GO:0010322, regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway

Term movements under GO:0009536, plastid
+ GO:0010319, stromule

Term movements under GO:0009605, response to external stimulus
+ GO:0060013, righting reflex

Term movements under GO:0009607, response to biotic stimulus
+ GO:0032494, response to peptidoglycan
+ GO:0032491, detection of molecule of fungal origin
+ GO:0032497, detection of lipopolysaccharide
+ GO:0032495, response to muramyl dipeptide
+ GO:0032490, detection of molecule of bacterial origin
+ GO:0032496, response to lipopolysaccharide
+ GO:0032492, detection of molecule of oomycetes origin
+ GO:0032498, detection of muramyl dipeptide
+ GO:0032493, response to bacterial lipoprotein
+ GO:0032499, detection of peptidoglycan

Term movements under GO:0009653, morphogenesis
+ GO:0032474, otolith morphogenesis
+ GO:0032475, otolith formation

Term movements under GO:0009719, response to endogenous stimulus
- GO:0006300, alt id for GO:0006298, mismatch repair
- GO:0006299, short patch mismatch repair system

Term movements under GO:0009790, embryonic development
+ GO:0032474, otolith morphogenesis
+ GO:0032475, otolith formation

Term movements under GO:0015031, protein transport
+ GO:0032779, copper-induced intracellular protein transport

Term movements under GO:0016043, cell organization and biogenesis
+ GO:0032779, copper-induced intracellular protein transport

Term movements under GO:0016740, transferase activity
+ GO:0000507, 1-acylglycerophosphocholine O-acyltransferase

Term movements under GO:0016787, hydrolase activity
+ GO:0032778, cobalt-transporting ATPase activity

Term movements under GO:0030154, cell differentiation
+ GO:0060014, granulosa cell differentiation
+ GO:0060016, granulosa cell development
+ GO:0002265, astrocyte activation during immune response
+ GO:0060015, granulosa cell fate commitment
+ GO:0060019, radial glial cell differentiation
+ GO:0060020, Bergmann glial cell differentiation
+ GO:0060018, astrocyte fate commitment
+ GO:0048143, astrocyte activation

Term movements under GO:0040029, regulation of gene expression, epigenetic
+ GO:0032776, DNA methylation on cytosine
+ GO:0032775, DNA methylation on adenine

Term movements under GO:0043234, protein complex
+ GO:0032766, NHE3/E3KARP/ACTN4 complex
+ GO:0032777, Piccolo NuA4 histone acetyltransferase complex
+ GO:0000509, Rpd3S complex
+ GO:0010317, pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex
+ GO:0032783, ELL-EAF complex
+ GO:0000508, Rpd3L complex
+ GO:0010318, pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex
+ GO:0010316, pyrophosphate-dependent phosphofructokinase complex
+ GO:0008043, ferritin complex

Term movements under GO:0050789, regulation of biological process
+ GO:0032772, negative regulation of monophenol oxygenase activity
+ GO:0010323, negative regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway
+ GO:0010321, regulation of vegetative phase change
+ GO:0032769, negative regulation of monooxygenase activity
+ GO:0032485, regulation of Ral protein signal transduction
+ GO:0032780, negative regulation of ATPase activity
+ GO:0032773, positive regulation of monophenol oxygenase activity
+ GO:0010322, regulation of isopentenyl diphosphate biosynthesis, mevalonate-independent pathway
+ GO:0032483, regulation of Rab protein signal transduction
+ GO:0032487, regulation of Rap protein signal transduction
+ GO:0032768, regulation of monooxygenase activity
+ GO:0032763, regulation of mast cytokine production
+ GO:0032770, positive regulation of monooxygenase activity
+ GO:0032765, positive regulation of mast cytokine production
+ GO:0032781, positive regulation of ATPase activity
+ GO:0032764, negative regulation of mast cytokine production
+ GO:0032771, regulation of monophenol oxygenase activity
+ GO:0032489, regulation of Cdc42 protein signal transduction


Term changes
============
KEY:  '+' : added, '-' : removed, '*' : changed

GO:0001772, immunological synapse
+2 synonym(s)
GO:0002237, response to molecule of bacterial origin
*name; *def; +1 synonym(s)
GO:0002238, response to molecule of fungal origin
*name; *def; +1 synonym(s)
GO:0002240, response to molecule of oomycetes origin
*name; *def; +1 synonym(s)
GO:0005524, ATP binding
+1 synonym(s)
GO:0006269, DNA replication, synthesis of RNA primer
+1 is_a(s)
GO:0006298, mismatch repair
+1 alt_id(s); +3 synonym(s)
GO:0006299, short patch mismatch repair system
*def; +comment; +is_obsolete
GO:0007265, Ras protein signal transduction
*def
GO:0007339, binding of sperm to zona pellucida
+1 synonym(s)
GO:0007435, salivary gland morphogenesis
*def
GO:0010293, abscisic aldehyde oxidase activity
*def
GO:0010296, prenylcysteine methylesterase activity
*def
GO:0010309, acireductone dioxygenase (Fe2+-requiring) activity
*def
GO:0010312, detoxification of zinc ion
*def
GO:0015010, tetrahydrocorphin metabolism
*def
GO:0015011, nickel-tetrapyrrole coenzyme metabolism
+def
GO:0016295, myristoyl-[acyl-carrier-protein] hydrolase activity
*def
GO:0017146, N-methyl-D-aspartate selective glutamate receptor complex
*1 synonym(s)
GO:0021861, radial glial cell differentiation in the forebrain
*name
GO:0021865, symmetric radial glial cell division in the forebrain
*name; *def
GO:0022023, radial glial cell fate commitment in the forebrain
*name; *def; +1 relationship(s)
GO:0032312, regulation of ARF GTPase activity
+1 relationship(s)
GO:0032313, regulation of Rab GTPase activity
+1 relationship(s)
GO:0032314, regulation of Rac GTPase activity
+1 relationship(s)
GO:0032315, regulation of Ral GTPase activity
+1 relationship(s)
GO:0032316, regulation of Ran GTPase activity
+1 relationship(s)
GO:0032317, regulation of Rap GTPase activity
+1 relationship(s)
GO:0032318, regulation of Ras GTPase activity
+1 relationship(s)
GO:0032319, regulation of Rho GTPase activity
+1 relationship(s)
GO:0032446, protein modification by small protein conjugation
*def
GO:0032474, otolith morphogenesis
+1 is_a(s)
GO:0032475, otolith formation
+1 is_a(s)
GO:0035267, NuA4 histone acetyltransferase complex
*name; *def; +1 synonym(s)
GO:0042033, chemokine biosynthesis
+1 relationship(s)
GO:0042090, interleukin-12 biosynthesis
+1 relationship(s)
GO:0042091, interleukin-10 biosynthesis
+1 relationship(s)
GO:0042094, interleukin-2 biosynthesis
+1 relationship(s)
GO:0042095, interferon-gamma biosynthesis
+1 relationship(s)
GO:0042097, interleukin-4 biosynthesis
+1 relationship(s)
GO:0042109, tumor necrosis factor-beta biosynthesis
+1 relationship(s)
GO:0042222, interleukin-1 biosynthesis
+1 relationship(s)
GO:0042223, interleukin-3 biosynthesis
+1 relationship(s)
GO:0042225, interleukin-5 biosynthesis
+1 relationship(s)
GO:0042226, interleukin-6 biosynthesis
+1 relationship(s)
GO:0042227, interleukin-7 biosynthesis
+1 relationship(s)
GO:0042228, interleukin-8 biosynthesis
+1 relationship(s)
GO:0042229, interleukin-9 biosynthesis
+1 relationship(s)
GO:0042230, interleukin-11 biosynthesis
+1 relationship(s)
GO:0042231, interleukin-13 biosynthesis
+1 relationship(s)
GO:0042232, interleukin-14 biosynthesis
+1 relationship(s)
GO:0042233, interleukin-15 biosynthesis
+1 relationship(s)
GO:0042234, interleukin-16 biosynthesis
+1 relationship(s)
GO:0042235, interleukin-17 biosynthesis
+1 relationship(s)
GO:0042236, interleukin-19 biosynthesis
+1 relationship(s)
GO:0042237, interleukin-20 biosynthesis
+1 relationship(s)
GO:0042238, interleukin-21 biosynthesis
+1 relationship(s)
GO:0042239, interleukin-22 biosynthesis
+1 relationship(s)
GO:0042240, interleukin-23 biosynthesis
+1 relationship(s)
GO:0042241, interleukin-18 biosynthesis
+1 relationship(s)
GO:0042253, granulocyte macrophage colony-stimulating factor biosynthesis
+1 relationship(s)
GO:0042269, regulation of natural killer cell mediated cytotoxicity
*1 synonym(s)
GO:0042331, phototaxis
*1 synonym(s)
GO:0042332, gravitaxis
*1 synonym(s)
GO:0042533, tumor necrosis factor-alpha biosynthesis
+1 relationship(s)
GO:0042834, peptidoglycan binding
*def
GO:0043088, regulation of Cdc42 GTPase activity
+1 relationship(s)
GO:0043137, DNA replication, removal of RNA primer
+1 is_a(s)
GO:0043189, H4/H2A histone acetyltransferase complex
*def; -1 synonym(s)
GO:0045189, connective tissue growth factor biosynthesis
+1 synonym(s); +1 relationship(s)
GO:0045349, interferon-alpha biosynthesis
+1 relationship(s)
GO:0045350, interferon-beta biosynthesis
+1 relationship(s)
GO:0045351, interferon type I biosynthesis
+1 relationship(s)
GO:0045524, interleukin-24 biosynthesis
+1 relationship(s)
GO:0045525, interleukin-25 biosynthesis
+1 relationship(s)
GO:0045526, interleukin-26 biosynthesis
+1 relationship(s)
GO:0045527, interleukin-27 biosynthesis
+1 relationship(s)
GO:0045553, TRAIL biosynthesis
+1 relationship(s)
GO:0046536, dosage compensation complex
*def
GO:0046956, positive phototaxis
*1 synonym(s)
GO:0046957, negative phototaxis
*1 synonym(s)
GO:0048060, negative gravitaxis
*1 synonym(s)
GO:0048061, positive gravitaxis
*1 synonym(s)
GO:0048143, astrocyte activation
+1 relationship(s)
GO:0048175, hepatocyte growth factor biosynthesis
+1 relationship(s)
GO:0048898, anterior lateral line system development
*1 synonym(s)
GO:0050719, interleukin-1 alpha biosynthesis
+1 relationship(s)
GO:0050751, fractalkine biosynthesis
+1 relationship(s)



File Stats (for the new file)
==========
biological_process: 12904 terms (12698 defined; 349 obsolete)
cellular_component: 1976 terms (1921 defined; 128 obsolete)
molecular_function: 8049 terms (7465 defined; 535 obsolete)

totals: 22929 terms (22084/96.3% defined; 1012/4.4% obsolete)