GO Monthly Release Notes for November 2006
========================
Generated on Tue Jan 2 14:49:04 2007
Files used:
gene_ontology.obo
OLD: version 4.125, 31:10:2006 10:26
NEW: version 4.147, 29:11:2006 19:30
goslim_generic
Key:
|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope
(obs)
1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name
Columns are tab-delimited and can be imported into Excel for ease of reading.
New terms in biological_process ontology (68 new terms)
GO:0010286 GO:0006950 TAIR D heat acclimation
GO:0009628
GO:0010288 GO:0008150 TAIR D response to lead ion
GO:0010289 GO:0005975 TAIR D homogalacturonan biosynthesis
GO:0009058
GO:0010299 GO:0008150 TAIR D detoxification of cobalt ion
GO:0032400 GO:0016043 MAH D melanosome localization
GO:0032401 GO:0016043 MAH D establishment of melanosome localization
GO:0032402 GO:0016043 MAH D melanosome transport
GO:0032409 GO:0050789 MAH D regulation of transporter activity
GO:0032410 GO:0050789 MAH D negative regulation of transporter activity
GO:0032411 GO:0050789 MAH D positive regulation of transporter activity
GO:0032412 GO:0050789 MAH D regulation of ion transporter activity
GO:0032413 GO:0050789 MAH D negative regulation of ion transporter activity
GO:0032414 GO:0050789 MAH D positive regulation of ion transporter activity
GO:0032415 GO:0050789 MAH D regulation of sodium:hydrogen antiporter activity
GO:0032416 GO:0050789 MAH D negative regulation of sodium:hydrogen antiporter activity
GO:0032417 GO:0050789 MAH D positive regulation of sodium:hydrogen antiporter activity
GO:0032418 GO:0007582 MAH D lysosome localization
GO:0032423 GO:0006259 MAH D regulation of mismatch repair
GO:0006950
GO:0009719
GO:0050789
GO:0032424 GO:0006259 MAH D negative regulation of mismatch repair
GO:0006950
GO:0009719
GO:0050789
GO:0032425 GO:0006259 MAH D positive regulation of mismatch repair
GO:0006950
GO:0009719
GO:0050789
GO:0032429 GO:0050789 MAH D regulation of phospholipase A2 activity
GO:0032430 GO:0050789 MAH D positive regulation of phospholipase A2 activity
GO:0032431 GO:0050789 MAH D activation of phospholipase A2
GO:0032434 GO:0009056 MAH D regulation of proteasomal ubiquitin-dependent protein catabolism
GO:0019538
GO:0050789
GO:0032435 GO:0009056 MAH D negative regulation of proteasomal ubiquitin-dependent protein catabolism
GO:0019538
GO:0050789
GO:0032436 GO:0009056 MAH D positive regulation of proteasomal ubiquitin-dependent protein catabolism
GO:0019538
GO:0050789
GO:0032438 GO:0006996 MAH D melanosome organization and biogenesis
GO:0032439 GO:0007582 MAH D endosome localization
GO:0032443 GO:0006629 MAH D regulation of ergosterol biosynthesis
GO:0009058
GO:0050789
GO:0032445 GO:0006810 MAH D fructose import
GO:0032446 GO:0006464 MAH D protein modification by small protein conjugation
GO:0032447 GO:0006464 MAH D protein urmylation
GO:0032455 GO:0006464 MAH D nerve growth factor processing
GO:0032456 GO:0006810 MAH D endocytic recycling
GO:0016043
GO:0032457 GO:0006810 MAH D fast endocytic recycling
GO:0016043
GO:0032458 GO:0006810 MAH D slow endocytic recycling
GO:0016043
GO:0032459 GO:0019538 MAH D 1601087 regulation of protein oligomerization
GO:0050789
GO:0032460 GO:0019538 MAH D 1601087 negative regulation of protein oligomerization
GO:0050789
GO:0032461 GO:0019538 MAH D 1601087 positive regulation of protein oligomerization
GO:0050789
GO:0032462 GO:0019538 MAH D 1601087 regulation of protein homooligomerization
GO:0050789
GO:0032463 GO:0019538 MAH D 1601087 negative regulation of protein homooligomerization
GO:0050789
GO:0032464 GO:0019538 MAH D 1601087 positive regulation of protein homooligomerization
GO:0050789
GO:0032465 GO:0007582 MAH D regulation of cytokinesis
GO:0050789
GO:0032466 GO:0007582 MAH D negative regulation of cytokinesis
GO:0050789
GO:0032467 GO:0007582 MAH D positive regulation of cytokinesis
GO:0050789
GO:0032468 GO:0019725 MAH D Golgi calcium ion homeostasis
GO:0032469 GO:0019725 MAH D endoplasmic reticulum calcium ion homeostasis
GO:0032470 GO:0019725 MAH D elevation of endoplasmic reticulum calcium ion concentration
GO:0032471 GO:0019725 MAH D reduction of endoplasmic reticulum calcium ion concentration
GO:0032472 GO:0006811 MAH D Golgi calcium ion transport
GO:0016043
GO:0055018 GO:0007275 AI D 1584416 regulation of cardiac muscle fiber development
GO:0050789
GO:0055019 GO:0007275 AI D 1584416 negative regulation of cardiac muscle fiber development
GO:0050789
GO:0055020 GO:0007275 AI D 1584416 positive regulation of cardiac muscle fiber development
GO:0050789
GO:0055021 GO:0007275 AI D 1584416 regulation of cardiac muscle growth
GO:0040007
GO:0050789
GO:0055022 GO:0007275 AI D 1584416 negative regulation of cardiac muscle growth
GO:0040007
GO:0050789
GO:0055023 GO:0007275 AI D 1584416 positive regulation of cardiac muscle growth
GO:0040007
GO:0050789
GO:0055024 GO:0007275 AI D 1584416 regulation of cardiac muscle development
GO:0050789
GO:0055025 GO:0007275 AI D 1584416 positive regulation of cardiac muscle development
GO:0050789
GO:0055026 GO:0007275 AI D 1584416 negative regulation of cardiac muscle development
GO:0050789
GO:0060003 GO:0006811 AI D copper ion export
GO:0060004 GO:0009605 AI D reflex process
GO:0060005 GO:0009605 AI D vestibular reflex
GO:0060006 GO:0009605 AI D angular vestibuloocular reflex
GO:0060007 GO:0009605 AI D linear vestibuloocular reflex
GO:0060008 GO:0009653 AI D Sertoli cell differentiation
GO:0030154
GO:0060009 GO:0009653 AI D Sertoli cell development
GO:0030154
GO:0060010 GO:0009653 AI D Sertoli cell fate commitment
GO:0030154
GO:0060011 GO:0008283 AI D Sertoli cell proliferation
GO:0009653
Term name changes in biological_process ontology
GO:0006898: receptor mediated endocytosis --> receptor-mediated endocytosis
GO:0031108: holo-[acyl-carrier protein] biosynthesis --> holo-[acyl-carrier-protein] biosynthesis
GO:0042967: acyl-carrier protein biosynthesis --> acyl-carrier-protein biosynthesis
New definitions for biological_process ontology terms (3 new definitions)
GO:0006189, 'de novo' IMP biosynthesis
GO:0006207, 'de novo' pyrimidine base biosynthesis
GO:0015010, tetrahydrocorphin metabolism
Term movements in biological_process ontology:
Terms movements under GO Slim term 'protein modification ; GO:0006464'
- GO:0002497, proteosomal proteolysis associated with antigen processing and presentation
- GO:0006511, ubiquitin-dependent protein catabolism
- GO:0007092, anaphase-promoting complex activation during mitotic cell cycle
- GO:0008054, cyclin catabolism
- GO:0030433, ER-associated protein catabolism
- GO:0030579, ubiquitin-dependent SMAD protein catabolism
- GO:0031145, anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolism
- GO:0031146, SCF-dependent proteasomal ubiquitin-dependent protein catabolism
- GO:0043161, proteasomal ubiquitin-dependent protein catabolism
- GO:0043162, ubiquitin-dependent protein catabolism via the multivesicular body pathway
- GO:0043328, protein targeting to vacuole during ubiquitin-dependent protein catabolism via the MVB pathway
- GO:0043329, protein targeting to membrane during ubiquitin-dependent protein catabolism via the MVB pathway
Terms movements under GO Slim term 'response to stress ; GO:0006950'
+ GO:0000161, MAPKKK cascade during osmolarity sensing
+ GO:0000167, activation of MAPKKK activity during osmolarity sensing
+ GO:0000168, activation of MAPKK activity during osmolarity sensing
+ GO:0000169, activation of MAPK activity during osmolarity sensing
+ GO:0000173, inactivation of MAPK activity during osmolarity sensing
+ GO:0000208, nuclear translocation of MAPK during osmolarity sensing
+ GO:0007231, osmosensory signaling pathway
+ GO:0007232, osmosensory signaling pathway via Sho1 osmosensor
+ GO:0007233, activation of Pbs2 kinase
+ GO:0007234, osmosensory signaling pathway via two-component system
Terms movements under GO Slim term 'cell-cell signaling ; GO:0007267'
+ GO:0048897, myelination of lateral line nerve axons
+ GO:0048914, myelination of anterior lateral line nerve axons
+ GO:0048932, myelination of posterior lateral line nerve axons
Terms movements under GO Slim term 'response to external stimulus ; GO:0009605'
+ GO:0050883, musculoskeletal movement, spinal reflex action
Terms movements under GO Slim term 'response to abiotic stimulus ; GO:0009628'
+ GO:0000161, MAPKKK cascade during osmolarity sensing
+ GO:0000167, activation of MAPKKK activity during osmolarity sensing
+ GO:0000168, activation of MAPKK activity during osmolarity sensing
+ GO:0000169, activation of MAPK activity during osmolarity sensing
+ GO:0000173, inactivation of MAPK activity during osmolarity sensing
+ GO:0000208, nuclear translocation of MAPK during osmolarity sensing
+ GO:0007231, osmosensory signaling pathway
+ GO:0007232, osmosensory signaling pathway via Sho1 osmosensor
+ GO:0007233, activation of Pbs2 kinase
+ GO:0007234, osmosensory signaling pathway via two-component system
Terms movements under GO Slim term 'morphogenesis ; GO:0009653'
- GO:0000903, cellular morphogenesis during vegetative growth
Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
- GO:0000903, cellular morphogenesis during vegetative growth
Terms movements under GO Slim term 'cell growth ; GO:0016049'
+ GO:0000903, cellular morphogenesis during vegetative growth
Terms movements under GO Slim term 'protein metabolism ; GO:0019538'
+ GO:0002497, proteosomal proteolysis associated with antigen processing and presentation
+ GO:0006511, ubiquitin-dependent protein catabolism
+ GO:0007092, anaphase-promoting complex activation during mitotic cell cycle
+ GO:0008054, cyclin catabolism
+ GO:0030433, ER-associated protein catabolism
+ GO:0030579, ubiquitin-dependent SMAD protein catabolism
+ GO:0031145, anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolism
+ GO:0031146, SCF-dependent proteasomal ubiquitin-dependent protein catabolism
+ GO:0043161, proteasomal ubiquitin-dependent protein catabolism
+ GO:0043162, ubiquitin-dependent protein catabolism via the multivesicular body pathway
+ GO:0043328, protein targeting to vacuole during ubiquitin-dependent protein catabolism via the MVB pathway
+ GO:0043329, protein targeting to membrane during ubiquitin-dependent protein catabolism via the MVB pathway
Terms movements under GO Slim term 'regulation of biological process ; GO:0050789'
+ GO:0043006, calcium-dependent phospholipase A2 activation
New terms in cellular_component ontology (15 new terms)
GO:0000418 GO:0005654 SGD D DNA-directed RNA polymerase IV complex
GO:0043234
GO:0000419 GO:0005654 SGD D DNA-directed RNA polymerase IVb complex
GO:0043234
GO:0000420 GO:0005654 SGD D DNA-directed RNA polymerase IVa complex
GO:0043234
GO:0010287 GO:0009536 TAIR D plastoglobule
GO:0032398 GO:0005886 MAH D MHC class Ib protein complex
GO:0043234
GO:0032419 GO:0005764 MAH D extrinsic to lysosome membrane
GO:0032420 GO:0005623 MAH D stereocilium
GO:0032421 GO:0005622 MAH D stereocilium bundle
GO:0043226
GO:0032426 GO:0005622 MAH D stereocilium bundle tip
GO:0043226
GO:0032432 GO:0005856 MAH D actin filament bundle
GO:0032433 GO:0005623 MAH D filopodium tip
GO:0032437 GO:0005737 MAH D cuticular plate
GO:0005856
GO:0032444 GO:0043234 MAH D activin responsive factor complex
GO:0032449 GO:0043234 MAH D 1587275 CBM complex
GO:0032473 GO:0005739 MAH D external side of mitochondrial outer membrane
Term name changes in cellular_component ontology
GO:0005606: laminin-1 --> laminin-1 complex
GO:0005607: laminin-2 --> laminin-2 complex
GO:0005608: laminin-3 --> laminin-3 complex
GO:0005609: laminin-4 --> laminin-4 complex
GO:0005610: laminin-5 --> laminin-5 complex
GO:0005611: laminin-6 --> laminin-6 complex
GO:0005612: laminin-7 --> laminin-7 complex
GO:0005859: muscle myosin --> muscle myosin complex
GO:0005931: nexin --> nexin complex
GO:0008352: katanin --> katanin complex
GO:0016459: myosin --> myosin complex
GO:0016460: myosin II --> myosin II complex
GO:0016461: unconventional myosin --> unconventional myosin complex
GO:0031474: myosin IV --> myosin IV complex
GO:0031475: myosin V --> myosin V complex
GO:0031476: myosin VI --> myosin VI complex
GO:0031477: myosin VII --> myosin VII complex
GO:0031478: myosin VIII --> myosin VIII complex
GO:0031479: myosin IX --> myosin IX complex
GO:0031480: myosin X --> myosin X complex
GO:0031481: myosin XI --> myosin XI complex
GO:0031482: myosin XII --> myosin XII complex
GO:0031483: myosin XIII --> myosin XIII complex
GO:0031484: myosin XIV --> myosin XIV complex
GO:0031485: myosin XV --> myosin XV complex
GO:0031486: myosin XVI --> myosin XVI complex
GO:0031487: myosin XVII --> myosin XVII complex
GO:0031488: myosin XVIII --> myosin XVIII complex
GO:0042385: myosin III --> myosin III complex
GO:0042642: actomyosin, myosin part --> actomyosin, myosin complex part
GO:0043257: laminin-8 --> laminin-8 complex
GO:0043258: laminin-9 --> laminin-9 complex
GO:0043259: laminin-10 --> laminin-10 complex
GO:0043260: laminin-11 --> laminin-11 complex
GO:0043261: laminin-12 --> laminin-12 complex
GO:0045160: myosin I --> myosin I complex
GO:0045298: tubulin --> tubulin complex
New definitions for cellular_component ontology terms (6 new definitions)
GO:0005633, ascus lipid droplet
GO:0005872, minus-end kinesin complex
GO:0005873, plus-end kinesin complex
GO:0009576, leucoplast stroma
GO:0009577, elaioplast stroma
GO:0019008, molybdopterin synthase complex
New term merges in cellular_component ontology
GO:0019009 has been merged into GO:0019008, molybdopterin synthase complex
Term movements in cellular_component ontology:
Terms movements under GO Slim term 'cytoplasm ; GO:0005737'
- GO:0042470, melanosome
Terms movements under GO Slim term 'cytoplasmic membrane-bound vesicle ; GO:0016023'
+ GO:0042470, melanosome
Terms movements under GO Slim term 'organelle ; GO:0043226'
- GO:0042470, melanosome
New terms in molecular_function ontology (39 new terms)
GO:0010290 GO:0005215 TAIR D chlorophyll catabolite transporter activity
GO:0010291 GO:0003824 TAIR D carotene beta-ring hydroxylase activity
GO:0010292 GO:0005215 TAIR D GTP:GDP antiporter activity
GO:0010293 GO:0003824 TAIR D abscisic aldehyde oxidase activity
GO:0010294 GO:0016740 TAIR D abscisic acid glucosyltransferase activity
GO:0010295 GO:0003824 TAIR D (+)-abscisic acid 8'-hydroxylase activity
GO:0010296 GO:0016787 TAIR D prenylcysteine methylesterase activity
GO:0010297 GO:0030246 TAIR D heteroglycan binding
GO:0010298 GO:0003824 TAIR D dihydrocamalexic acid decarboxylase activity
GO:0010300 GO:0003824 TAIR D acyl-ACP synthetase activity
GO:0010301 GO:0003824 TAIR D xanthoxin dehydrogenase activity
GO:0010302 GO:0003824 TAIR D 2-oxoglutarate-dependent dioxygenase activity
GO:0032393 GO:0004872 MAH D MHC class I receptor activity
GO:0032394 GO:0004872 MAH D MHC class Ib receptor activity
GO:0032395 GO:0004872 MAH D MHC class II receptor activity
GO:0032396 GO:0004872 MAH D inhibitory MHC class I receptor activity
GO:0032397 GO:0004872 MAH D activating MHC class I receptor activity
GO:0032399 GO:0005515 MAH D HECT domain binding
GO:0032403 GO:0005515 MAH D protein complex binding
GO:0032404 GO:0005515 MAH D mismatch repair complex binding
GO:0032405 GO:0005515 MAH D MutLalpha complex binding
GO:0032406 GO:0005515 MAH D MutLbeta complex binding
GO:0032407 GO:0005515 MAH D MutSalpha complex binding
GO:0032408 GO:0005515 MAH D MutSbeta complex binding
GO:0032422 GO:0003677 MAH D purine-rich negative regulatory element binding
GO:0032427 GO:0005515 MAH D GBD domain binding
GO:0032428 GO:0016787 MAH D beta-N-acetylgalactosaminidase activity
GO:0032440 GO:0003824 MAH D 2-alkenal reductase activity
GO:0032441 GO:0003824 MAH D pheophorbide a oxygenase activity
GO:0032442 GO:0003824 MAH D phenylcoumaran benzylic ether reductase activity
GO:0032448 GO:0003677 MAH D DNA hairpin binding
GO:0032450 GO:0016787 MAH D maltase activity
GO:0032451 GO:0003824 MAH D demethylase activity
GO:0032452 GO:0003824 MAH D histone demethylase activity
GO:0032453 GO:0003824 MAH D histone demethylase activity (H3-K4 specific)
GO:0032454 GO:0003824 MAH D histone demethylase activity (H3-K9 specific)
GO:0043682 GO:0005215 JL D copper-transporting ATPase activity
GO:0016787
GO:0060001 GO:0003774 AI D minus-end directed actin-filament motor activity
GO:0060002 GO:0003774 AI D plus-end directed actin-filament motor activity
New obsoletions in molecular_function ontology
GO:0030106, MHC class I receptor activity: the definition is ambiguous and contains incorrect information.
GO:0045012, MHC class II receptor activity: was defined ambiguously, and has therefore been used incorrectly in annotations.
Term name changes in molecular_function ontology
GO:0004313: [acyl-carrier protein] S-acetyltransferase activity --> [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314: [acyl-carrier protein] S-malonyltransferase activity --> [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315: 3-oxoacyl-[acyl-carrier protein] synthase activity --> 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316: 3-oxoacyl-[acyl-carrier protein] reductase activity --> 3-oxoacyl-[acyl-carrier-protein] reductase activity
GO:0004317: 3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase activity --> 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004318: enoyl-[acyl-carrier protein] reductase (NADH) activity --> enoyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0004319: enoyl-[acyl-carrier protein] reductase (NADPH, B-specific) activity --> enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320: oleoyl-[acyl-carrier protein] hydrolase activity --> oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0008659: (3R)-hydroxymyristoyl-[acyl-carrier protein] dehydratase activity --> (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
GO:0008693: 3-hydroxydecanoyl-[acyl-carrier protein] dehydratase activity --> 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
GO:0008770: [acyl-carrier protein] phosphodiesterase activity --> [acyl-carrier-protein] phosphodiesterase activity
GO:0008779: acyl-[acyl-carrier protein]-phospholipid O-acyltransferase activity --> acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity
GO:0008780: acyl-[acyl-carrier protein]-UDP-N-acetylglucosamine O-acyltransferase activity --> acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
GO:0008922: long-chain-fatty-acid-[acyl-carrier protein] ligase activity --> long-chain-fatty-acid-[acyl-carrier-protein] ligase activity
GO:0008951: palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity --> palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity
GO:0016295: myristoyl-[acyl-carrier protein] hydrolase activity --> myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296: palmitoyl-[acyl-carrier protein] hydrolase activity --> palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297: acyl-[acyl-carrier protein] hydrolase activity --> acyl-[acyl-carrier-protein] hydrolase activity
GO:0016631: enoyl-[acyl-carrier protein] reductase activity --> enoyl-[acyl-carrier-protein] reductase activity
GO:0016708: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD or NADH as one donor, and incorporation of two atoms of oxygen into one donor --> oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor
GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD or NADH as one donor, and incorporation of one atom of oxygen --> oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen
GO:0019171: 3-hydroxyacyl-[acyl-carrier protein] dehydratase activity --> 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0045300: acyl-[acyl-carrier protein] desaturase activity --> acyl-[acyl-carrier-protein] desaturase activity
GO:0047025: 3-oxoacyl-[acyl-carrier protein] reductase (NADH) activity --> 3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0047117: enoyl-[acyl-carrier protein] reductase (NADPH, A-specific) activity --> enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047381: dodecanoyl-[acyl-carrier protein] hydrolase activity --> dodecanoyl-[acyl-carrier-protein] hydrolase activity
GO:0047450: crotonoyl-[acyl-carrier protein] hydratase activity --> crotonoyl-[acyl-carrier-protein] hydratase activity
GO:0047451: 3-hydroxyoctanoyl-[acyl-carrier protein] dehydratase activity --> 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0050519: holo-[acyl-carrier protein] synthase activity --> holo-[acyl-carrier-protein] synthase activity
New definitions for molecular_function ontology terms (19 new definitions)
GO:0005042, netrin receptor activity
GO:0005043, repulsive netrin receptor activity
GO:0008267, poly-glutamine tract binding
GO:0016701, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0016702, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016703, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
GO:0016705, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016708, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor
GO:0016709, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen
GO:0016712, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
GO:0016713, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen
GO:0016714, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen
GO:0016715, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0016716, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen
GO:0016717, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0046996, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with NADH or NADPH as one donor, and the other dehydrogenated
GO:0050498, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated
GO:0050499, oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor
Term movements in molecular_function ontology:
Terms movements under GO Slim term 'molecular_function ; GO:0003674'
+ GO:0005246, calcium channel regulator activity
+ GO:0008200, ion channel inhibitor activity
+ GO:0015457, auxiliary transport protein activity
+ GO:0015458, low voltage-gated potassium channel auxiliary protein activity
+ GO:0015459, potassium channel regulator activity
+ GO:0015460, transport accessory protein activity
+ GO:0016247, channel regulator activity
+ GO:0016248, channel inhibitor activity
+ GO:0016249, channel localizer activity
+ GO:0016974, sodium channel auxiliary protein activity
+ GO:0017080, sodium channel regulator activity
+ GO:0017081, chloride channel regulator activity
+ GO:0019855, calcium channel inhibitor activity
+ GO:0019869, chloride channel inhibitor activity
+ GO:0019870, potassium channel inhibitor activity
+ GO:0019871, sodium channel inhibitor activity
Terms movements under GO Slim term 'transporter activity ; GO:0005215'
- GO:0005246, calcium channel regulator activity
- GO:0008200, ion channel inhibitor activity
- GO:0015457, auxiliary transport protein activity
- GO:0015458, low voltage-gated potassium channel auxiliary protein activity
- GO:0015459, potassium channel regulator activity
- GO:0015460, transport accessory protein activity
- GO:0016247, channel regulator activity
- GO:0016248, channel inhibitor activity
- GO:0016249, channel localizer activity
- GO:0016974, sodium channel auxiliary protein activity
- GO:0017080, sodium channel regulator activity
- GO:0017081, chloride channel regulator activity
- GO:0019855, calcium channel inhibitor activity
- GO:0019869, chloride channel inhibitor activity
- GO:0019870, potassium channel inhibitor activity
- GO:0019871, sodium channel inhibitor activity
SourceForge items closed this month:
SF id Resolution SF item title GO ids added, if any
1237491 None neuropeptide activity
1240327 None new child of regulation of synaptic plasticity
1459883 None Regulation of regulated release
1493227 Accepted GO:0007234 : osmosensory signaling pathway via two-component
1498795 Accepted phospholipase A2 activation
1511520 None netrin receptor activity
1524648 Accepted regulation of sodium:hydrogen antiporter activity
1558514 Works For Me mp: intracellular signalling cascade
1567822 Fixed Changes in MHC Terms in MF and CC
1569577 Accepted NEW TERM: DNA-directed RNA polymerase IV complex
1569608 Fixed GO:0046536, dosage compensation complex definition
1573845 None NTR: lens development
1574595 Accepted ntr: refe genome missing term
1575421 None Vestibular reflexes
1575424 Accepted melanosome localization
1578182 Accepted NTR: HECT domain binding
1578810 Accepted NTR: mismatch repair complex binding terms
1580593 Accepted lysosome localization
1580611 Accepted extrinsic to lysosome membrane
1582767 Later auxiliary transport protein/channel regulator activity
1582867 Accepted stereocilium
1583531 Fixed missing parent/ammonium channel activity
1584277 Accepted NTR: PNR element binding
1584578 None synonym for 'germ cell development'
1585189 Accepted add is_a parent for a LLn myelination
1587325 Accepted protein complex terms
1587343 None plus/minus-end directed actin filament movement
1587880 Accepted regulation of mismatch repair
1588550 Accepted synonyms for 'cell projection membrane' term
1588660 Accepted endocytic recycling
1588691 Works For Me NTR microtubule stabilization
1588923 Accepted New term: heat acclimation
1588926 Accepted New term: plastoglobule
1588927 Accepted New term: response to lead ion
1588931 Accepted New term: homogalacturonan biosynthesis
1588993 Accepted New term: chlorophyll catabolite transporter activity
1589002 Accepted New term: carotene beta-ring hydroxylase activity
1589006 Accepted New term: GTP:GDP antiporter activity
1589008 Accepted New term: abscisic aldehyde oxidase activity
1589286 None NTR: copper ion export
1589417 Accepted New term: abscisic acid glucosyltransferase activity
1589420 Accepted New term: (+)-abscisic acid 8'-hydroxylase activity
1589469 Accepted New term: prenylcysteine methylesterase activity
1589483 Accepted acireductone dioxygenase activity
1589489 Accepted maltase activity
1589594 Accepted ntr: GBD domain binding
1589600 Accepted New term: heteroglycan binding
1589604 Accepted New term: dihydrocamalexic acid decarboxylase activity
1589610 Accepted New term: lateral root formation
1589662 Accepted New term: detoxification of cobalt ion
1589666 Accepted New term: acyl-ACP synthetase activity
1589668 Accepted New term: xanthoxin dehydrogenase activity
1590005 Accepted endosome localization
1591341 Fixed phosphoinositide 3-phosphatase activity
1591413 Accepted beta-N-acetylgalactosaminidase activity
1591429 Accepted actin filament bundle
1591503 Works For Me actin-dependent ATPase activity
1591941 Accepted filopodium tip
1592304 Accepted synonym/definition addition GO:4034
1592314 Accepted ntr: regulation terms for proteasomal ubiq-dep catabolism
1592520 Fixed acyl-carrier-protein terms
1594149 Accepted cuticular plate
1595591 Accepted mp:cellular morphogenesis during vegetative growth
1595598 Accepted NTR: melanosome organization and biogenesis
1595880 Accepted 2-alkenal reductase activity
1595911 Accepted 2-oxoglutarate-dependent dioxygenase activity
1596010 Accepted pheophorbide a oxygenase activity
1596025 Accepted phenylcoumaran benzylic ether reductase activity
1597867 Accepted NTR: regulation of ergosterol biosynthesis
1598356 Accepted NTR: ARF complex
1598687 Accepted ntr: fructose import
1598690 Fixed cohesin loading complex tree placement?
1599584 Later missing is-a cellular physiological process parent
1599588 Accepted ntr: urmylation
1600284 Accepted DNA hairpin binding
1601079 Accepted EASY:Add TCR synonym
1601127 Accepted rg: quick: glucokinase/ hexokinase
1601129 Fixed rg: quick: mp: mannokinase
1602197 Accepted New child term of GO:0016486
1602303 Accepted mp: histone demethylase activity (H3-K36 specific) relat
1603729 Accepted ntr: regulation of cytokinesis
1603758 Accepted ntr: mito outer mem, cytosolic face
1603765 Accepted mp:telomere maintenance via semi-conservative replication
1603779 Accepted rg: NTR: golgi calcium ion homeostasis/transport
1603897 Accepted ntr: decaprenyl diphosphate synthase complex
1604622 Works For Me mp:tRNA adenylyltransferase activity
1604808 Accepted new term: acetylglutamate kinase regulator activity
1604814 Accepted new term: rhamnogalacturonan II biosynthesis
1604823 Accepted new term: regulation of hydrogen peroxide metabolism
1604827 Rejected new term: acyl-ACP thioesterase activity
1604835 Accepted new term: leaf vascular tissue pattern formation
1604874 Accepted new term PSII associated light-harvesting complex II catabol
1604902 Accepted new term: limit dextrinase activity
1604923 Accepted new term: detoxification of zinc ion
1605436 None new term: synaptic transmission, glycinergic
907476 Out of Date chromatin remodeling various
Statistics:
biological_process: 12685 terms, 98.4% defined (12478 terms defined)
cellular_component: 1964 terms, 97.2% defined (1909 terms defined)
molecular_function: 8038 terms, 92.7% defined (7454 terms defined)
Total: 22687 terms, 96.3% defined (21841 terms defined)
Term errors
none