GO Monthly Release Notes for December 2004
========================
Generated on Mon Jan 24 12:50:53 2005

Files used:
gene_ontology.obo
OLD: version 3.634, 30:11:2004 17:59
NEW: version 3.688, 23:12:2004 14:08
goslim_generic

Key:

|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941  GO:0009536  TAIR  D  SF:575119  chloroplast envelope
				 (obs)

1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name

Columns are tab-delimited and can be imported into Excel for ease of reading.

Ontology name changes:
Note that the three ontologies changed their names:
process --> biological_process
component --> cellular_component
function --> molecular_function

New terms in biological_process ontology (103 new terms)
GO:0001932	GO:0006464	MGI	D	1035336	regulation of protein amino acid phosphorylation
GO:0001933	GO:0006464	MGI	D	1035336	negative regulation of protein amino acid phosphorylation
GO:0001934	GO:0006464	MGI	D	1035336	positive regulation of protein amino acid phosphorylation
GO:0001935	GO:0008283	MGI	D	1035336	endothelial cell proliferation
GO:0001936	GO:0008283	MGI	D	1035336	regulation of endothelial cell proliferation
GO:0001937	GO:0008283	MGI	D	1035336	negative regulation of endothelial cell proliferation
GO:0001938	GO:0008283	MGI	D	1035336	positive regulation of endothelial cell proliferation
GO:0031075	GO:0009653	MAH	D	948605	eye morphogenesis (sensu Actinopterygii)
GO:0031076	GO:0009653	MAH	D	948605	embryonic eye morphogenesis (sensu Actinopterygii)
         	GO:0009790
GO:0031077	GO:0009653	MAH	D	948605	post-embryonic eye morphogenesis (sensu Actinopterygii)
GO:0031081	GO:0016043	MAH	D	1081397	nuclear pore distribution
GO:0031086	GO:0006139	MAH	D	1080977	mRNA catabolism, deadenylylation-independent decay
         	GO:0009056
GO:0031087	GO:0006139	MAH	D	1080977	deadenylylation-independent decapping
         	GO:0009056
GO:0035282	GO:0007275	FB	D	1070915	segmentation
GO:0035283	GO:0009653	FB	D	1072672	central nervous system segmentation
GO:0035284	GO:0009653	FB	D	1072672	brain segmentation
GO:0035285	GO:0009653	FB	D	1072672	appendage segmentation
GO:0035286	GO:0009653	FB	D	1072672	leg segmentation
GO:0035287	GO:0009790	FB	D	1072672	head segmentation
GO:0035288	GO:0009790	FB	D	1072672	anterior head segmentation
GO:0035289	GO:0009790	FB	D	1072672	posterior head segmentation
GO:0035290	GO:0009790	FB	D	1072672	trunk segmentation
GO:0035291	GO:0009790	FB	D	1072672	specification of segmental identity, intercalary segment
GO:0035292	GO:0009790	FB	D	1072672	specification of segmental identity, trunk
GO:0035293	GO:0007275	FB	D	1035336	larval cuticle pattern formation (sensu Insecta)
         	GO:0009058
GO:0035294	GO:0009653	FB	D	1035336	determination of wing disc primordium
GO:0035295	GO:0007275	FB	D	939379	tube development
GO:0035296	GO:0009653	FB	D	939379	regulation of tube diameter
GO:0035297	GO:0009653	FB	D	939379	regulation of Malpighian tubule diameter
         	GO:0009790
GO:0035298	GO:0009653	FB	D	939379	regulation of Malpighian tubule size
         	GO:0009790
GO:0035303	GO:0008152	FB	D	1085188	regulation of dephosphorylation
GO:0035304	GO:0006464	FB	D	1085188	regulation of protein amino acid dephosphorylation
GO:0035305	GO:0008152	FB	D	1085188	negative regulation of dephosphorylation
GO:0035306	GO:0008152	FB	D	1085188	positive regulation of dephosphorylation
GO:0035307	GO:0006464	FB	D	1085188	positive regulation of protein amino acid dephosphorylation
GO:0035308	GO:0006464	FB	D	1085188	negative regulation of protein amino acid dephosphorylation
GO:0035309	GO:0009653	FB	D	1035336	wing and notum subfield formation
GO:0035310	GO:0009653	FB	D	1035336	notum cell fate specification
         	GO:0030154
GO:0035311	GO:0009653	FB	D	1035336	wing cell fate specification
         	GO:0030154
GO:0043266	GO:0006811	JL	D	1035336	regulation of potassium ion transport
GO:0043267	GO:0006811	JL	D	1035336	negative regulation of potassium ion transport
GO:0043268	GO:0006811	JL	D	1035336	positive regulation of potassium ion transport
GO:0043269	GO:0006811	JL	D	1035336	regulation of ion transport
GO:0043270	GO:0006811	JL	D	1035336	positive regulation of ion transport
GO:0043271	GO:0006811	JL	D	1035336	negative regulation of ion transport
GO:0043272	GO:0006519	JL	D	1035336	ethylene biosynthesis during jasmonic acid and ethylene-dependent systemic resistance
         	GO:0006950
         	GO:0009058
         	GO:0009605
         	GO:0009607
GO:0043276	GO:0008219	JL	D	1035336	anoikis
GO:0043277	GO:0006810	JL	D	1035336	apoptotic cell clearance
         	GO:0008219
GO:0043278	GO:0009628	JL	D	1035336	response to morphine
GO:0043279	GO:0009628	JL	D	1035336	response to alkaloid
GO:0043280	GO:0008150	JL	D	1035336	positive regulation of caspase activity
GO:0043281	GO:0008150	JL	D	1035336	regulation of caspase activity
GO:0043282	GO:0009653	JL	D	1035336	pharyngeal muscle development
GO:0043283	GO:0008152	JL	D	1035336	biopolymer metabolism
GO:0043284	GO:0009058	JL	D	1035336	biopolymer biosynthesis
GO:0043285	GO:0009056	JL	D	1035336	biopolymer catabolism
GO:0043286	GO:0009058	JL	D	1080270	regulation of poly(3-hydroxyalkanoate) biosynthesis
GO:0043288	GO:0006629	JL	D	1035336	apocarotenoid metabolism
         	GO:0019748
GO:0043289	GO:0006629	JL	D	1035336	apocarotenoid biosynthesis
         	GO:0019748
GO:0043290	GO:0006629	JL	D	1035336	apocarotenoid catabolism
         	GO:0019748
GO:0044236	GO:0008152	JL	D	1035336	organismal metabolism
GO:0044237	GO:0008152	JL	D	1035336	cellular metabolism
GO:0044238	GO:0008152	JL	D	1035336	primary metabolism
GO:0044239	GO:0005975	JL	D	1035336	salivary polysaccharide catabolism
         	GO:0009056
GO:0044240	GO:0006629	JL	D	1035336	organismal lipid catabolism
         	GO:0009056
GO:0044241	GO:0007582	JL	D	1035336	lipid digestion
GO:0044242	GO:0006629	JL	D	1035336	cellular lipid catabolism
         	GO:0009056
GO:0044243	GO:0008152	JL	D	1035336	organismal catabolism
GO:0044244	GO:0005975	JL	D	1035336	organismal polysaccharide catabolism
         	GO:0009056
GO:0044245	GO:0007582	JL	D	1035336	polysaccharide digestion
GO:0044246	GO:0008152	JL	D	1035336	regulation of organismal metabolism
GO:0044247	GO:0005975	JL	D	1035336	cellular polysaccharide catabolism
         	GO:0009056
GO:0044248	GO:0009056	JL	D	1035336	cellular catabolism
GO:0044249	GO:0009058	JL	D	1035336	cellular biosynthesis
GO:0044250	GO:0008152	JL	D	1035336	negative regulation of metabolic activity during hibernation
GO:0044251	GO:0009056	JL	D	1035336	protein catabolism by pepsin
         	GO:0019538
GO:0044252	GO:0008152	JL	D	1035336	negative regulation of organismal metabolism
GO:0044253	GO:0008152	JL	D	1035336	positive regulation of organismal metabolism
GO:0044254	GO:0009056	JL	D	1035336	organismal protein catabolism
         	GO:0019538
GO:0044255	GO:0006629	JL	D	1035336	cellular lipid metabolism
GO:0044256	GO:0007582	JL	D	1035336	protein digestion
GO:0044257	GO:0009056	JL	D	1035336	cellular protein catabolism
         	GO:0019538
GO:0044258	GO:0006629	JL	D	1035336	intestinal lipid catabolism
         	GO:0009056
GO:0044259	GO:0008152	JL	D	1035336	organismal macromolecule metabolism
GO:0044260	GO:0008152	JL	D	1035336	cellular macromolecule metabolism
GO:0044261	GO:0005975	JL	D	1035336	organismal carbohydrate metabolism
GO:0044262	GO:0005975	JL	D	1035336	cellular carbohydrate metabolism
GO:0044263	GO:0005975	JL	D	1035336	organismal polysaccharide metabolism
GO:0044264	GO:0005975	JL	D	1035336	cellular polysaccharide metabolism
GO:0044265	GO:0009056	JL	D	1035336	cellular macromolecule catabolism
GO:0044266	GO:0009056	JL	D	1035336	organismal macromolecule catabolism
GO:0044267	GO:0019538	JL	D	1035336	cellular protein metabolism
GO:0044268	GO:0019538	JL	D	1035336	organismal protein metabolism
GO:0044269	GO:0009056	JL	D	1035336	glycerol ether catabolism
GO:0044270	GO:0009056	JL	D	1035336	nitrogen compound catabolism
GO:0044271	GO:0009058	JL	D	1035336	nitrogen compound biosynthesis
GO:0044272	GO:0009058	JL	D	1035336	sulfur compound biosynthesis
GO:0044273	GO:0009056	JL	D	1035336	sulfur compound catabolism
GO:0044274	GO:0009058	JL	D	1035336	organismal biosynthesis
GO:0044275	GO:0005975	JL	D	1035336	cellular carbohydrate catabolism
         	GO:0009056
GO:0044276	GO:0005975	JL	D	1035336	organismal carbohydrate catabolism
         	GO:0009056
GO:0051276	GO:0006996	AI	D	1071986	chromosome organization and biogenesis
GO:0051277	GO:0006996	AI	D	1071986	chromosome organization and biogenesis (sensu Bacteria)


Term name changes in biological_process ontology
GO:0001744: optic placode formation (sensu Drosophila) --> optic placode formation (sensu Endopterygota)
GO:0001745: compound eye morphogenesis (sensu Drosophila) --> compound eye morphogenesis (sensu Endopterygota)
GO:0001748: optic placode development (sensu Drosophila) --> optic placode development (sensu Endopterygota)
GO:0001749: non-eye photoreceptor development (sensu Drosophila) --> non-eye photoreceptor development (sensu Endopterygota)
GO:0001751: eye photoreceptor differentiation (sensu Drosophila) --> eye photoreceptor differentiation (sensu Endopterygota)
GO:0001752: eye photoreceptor fate commitment (sensu Drosophila) --> eye photoreceptor fate commitment (sensu Endopterygota)
GO:0001929: negative regulation of exocyst assembly. --> negative regulation of exocyst assembly
GO:0001930: positive regulation of exocyst assembly. --> positive regulation of exocyst assembly
GO:0006091: energy pathways --> generation of precursor metabolites and energy
GO:0006807: nitrogen metabolism --> nitrogen compound metabolism
GO:0007224: smoothened receptor signaling pathway --> smoothened signaling pathway
GO:0007225: patched receptor ligand processing --> patched ligand processing
GO:0007456: eye morphogenesis (sensu Drosophila) --> eye morphogenesis (sensu Endopterygota)
GO:0007458: progression of morphogenetic furrow (sensu Drosophila) --> progression of morphogenetic furrow (sensu Endopterygota)
GO:0007459: photoreceptor fate commitment (sensu Drosophila) --> photoreceptor fate commitment (sensu Endopterygota)
GO:0007466: cone cell fate commitment (sensu Drosophila) --> cone cell fate commitment (sensu Endopterygota)
GO:0007467: photoreceptor differentiation (sensu Drosophila) --> photoreceptor differentiation (sensu Endopterygota)
GO:0008057: eye pigment granule morphogenesis (sensu Drosophila) --> eye pigment granule morphogenesis (sensu Endopterygota)
GO:0008583: mystery cell fate differentiation (sensu Drosophila) --> mystery cell fate differentiation (sensu Endopterygota)
GO:0008589: regulation of smoothened receptor signaling pathway --> regulation of smoothened signaling pathway
GO:0008594: photoreceptor cell morphogenesis (sensu Drosophila) --> photoreceptor cell morphogenesis (sensu Endopterygota)
GO:0010000: negative regulation of cone cell fate specification (sensu Drosophila) --> negative regulation of cone cell fate specification (sensu Endopterygota)
GO:0016330: second mitotic wave (sensu Drosophila) --> second mitotic wave (sensu Endopterygota)
GO:0016560: peroxisome receptor docking --> peroxisome matrix protein import, docking
GO:0016561: peroxisome receptor translocation --> peroxisome matrix protein import, translocation
GO:0016562: peroxisome receptor recycling --> peroxisome matrix protein import, receptor recycling
GO:0042051: eye photoreceptor development (sensu Drosophila) --> eye photoreceptor development (sensu Endopterygota)
GO:0042067: establishment of ommatidial polarity (sensu Drosophila) --> establishment of ommatidial polarity (sensu Endopterygota)
GO:0042674: cone cell differentiation (sensu Drosophila) --> cone cell differentiation (sensu Endopterygota)
GO:0042677: cone cell fate determination (sensu Drosophila) --> cone cell fate determination (sensu Endopterygota)
GO:0042678: cone cell fate specification (sensu Drosophila) --> cone cell fate specification (sensu Endopterygota)
GO:0042681: regulation of cone cell fate specification (sensu Drosophila) --> regulation of cone cell fate specification (sensu Endopterygota)
GO:0043109: regulation of smoothened receptor activity --> regulation of smoothened activity
GO:0045162: clustering of voltage gated sodium channels --> clustering of voltage-gated sodium channels
GO:0045163: clustering of voltage gated potassium channels --> clustering of voltage-gated potassium channels
GO:0045314: regulation of eye photoreceptor development (sensu Drosophila) --> regulation of eye photoreceptor development (sensu Endopterygota)
GO:0045315: positive regulation of eye photoreceptor development (sensu Drosophila) --> positive regulation of eye photoreceptor development (sensu Endopterygota)
GO:0045316: negative regulation of eye photoreceptor development (sensu Drosophila) --> negative regulation of eye photoreceptor development (sensu Endopterygota)
GO:0045673: regulation of photoreceptor differentiation (sensu Drosophila) --> regulation of photoreceptor differentiation (sensu Endopterygota)
GO:0045674: negative regulation of photoreceptor differentiation (sensu Drosophila) --> negative regulation of photoreceptor differentiation (sensu Endopterygota)
GO:0045675: positive regulation of photoreceptor differentiation (sensu Drosophila) --> positive regulation of photoreceptor differentiation (sensu Endopterygota)
GO:0045877: negative regulation of smoothened receptor activity by patched --> negative regulation of smoothened activity
GO:0045878: positive regulation of smoothened receptor activity by patched --> positive regulation of smoothened activity
GO:0045879: negative regulation of smoothened receptor signaling pathway --> negative regulation of smoothened signaling pathway
GO:0045880: positive regulation of smoothened receptor signaling pathway --> positive regulation of smoothened signaling pathway
GO:0046667: retinal programmed cell death (sensu Drosophila) --> retinal programmed cell death (sensu Endopterygota)
GO:0046669: regulation of retinal programmed cell death (sensu Drosophila) --> regulation of retinal programmed cell death (sensu Endopterygota)
GO:0046672: positive regulation of retinal programmed cell death (sensu Drosophila) --> positive regulation of retinal programmed cell death (sensu Endopterygota)
GO:0046673: negative regulation of retinal programmed cell death (sensu Drosophila) --> negative regulation of retinal programmed cell death (sensu Endopterygota)
GO:0046675: induction of retinal programmed cell death (sensu Drosophila) --> induction of retinal programmed cell death (sensu Endopterygota)
GO:0046685: response to arsenate --> response to arsenic
GO:0048049: embryonic eye morphogenesis (sensu Drosophila) --> embryonic eye morphogenesis (sensu Endopterygota)
GO:0048051: post-embryonic eye morphogenesis (sensu Drosophila) --> post-embryonic eye morphogenesis (sensu Endopterygota)
GO:0048052: R1/R6 differentiation (sensu Drosophila) --> R1/R6 differentiation (sensu Endopterygota)
GO:0048053: R1/R6 development (sensu Drosophila) --> R1/R6 development (sensu Endopterygota)
GO:0048054: R2/R5 differentiation (sensu Drosophila) --> R2/R5 differentiation (sensu Endopterygota)
GO:0048055: R2/R5 development (sensu Drosophila) --> R2/R5 development (sensu Endopterygota)
GO:0048056: R3/R4 differentiation (sensu Drosophila) --> R3/R4 differentiation (sensu Endopterygota)
GO:0048057: R3/R4 development (sensu Drosophila) --> R3/R4 development (sensu Endopterygota)
GO:0048058: corneal lens formation (sensu Drosophila) --> corneal lens formation (sensu Endopterygota)
GO:0048072: eye pigmentation (sensu Drosophila) --> eye pigmentation (sensu Endopterygota)
GO:0048076: regulation of eye pigmentation (sensu Drosophila) --> regulation of eye pigmentation (sensu Endopterygota)
GO:0048077: negative regulation of eye pigmentation (sensu Drosophila) --> negative regulation of eye pigmentation (sensu Endopterygota)
GO:0048078: positive regulation of eye pigmentation (sensu Drosophila) --> positive regulation of eye pigmentation (sensu Endopterygota)


New definitions for biological_process ontology terms (22 new definitions)
GO:0006091, generation of precursor metabolites and energy
GO:0006924, programmed cell death, activated T-cells
GO:0006925, programmed cell death, inflammatory cells
GO:0006926, programmed cell death, virus-infected cells
GO:0006927, programmed cell death, transformed cells
GO:0007225, patched ligand processing
GO:0007227, signal transduction downstream of smoothened
GO:0007228, activation of hh target transcription factor
GO:0008334, histone mRNA metabolism
GO:0009265, 2'-deoxyribonucleotide biosynthesis
GO:0009394, 2'-deoxyribonucleotide metabolism
GO:0009760, C4 photosynthesis
GO:0009761, CAM photosynthesis
GO:0016559, peroxisome division
GO:0016560, peroxisome matrix protein import, docking
GO:0016561, peroxisome matrix protein import, translocation
GO:0016562, peroxisome matrix protein import, receptor recycling
GO:0019684, photosynthesis, light reaction
GO:0019685, photosynthesis, dark reaction
GO:0042434, indole derivative metabolism
GO:0042435, indole derivative biosynthesis
GO:0042436, indole derivative catabolism


New term merges in biological_process ontology
GO:0007226 has been merged into GO:0043109, regulation of smoothened activity
GO:0008151 has been merged into GO:0050875, cellular physiological process
GO:0042456 has been merged into GO:0009693, ethylene biosynthesis


Term movements in biological_process ontology:
Terms movements under GO Slim term 'generation of precursor metabolites and energy ; GO:0006091'
+ GO:0006118, electron transport
+ GO:0006119, oxidative phosphorylation
- GO:0009767, photosynthetic electron transport
- GO:0009772, photosynthetic electron transport in photosystem II
- GO:0009773, photosynthetic electron transport in photosystem I
- GO:0009774, photosynthetic electron transport in plastoquinone
- GO:0009775, photosynthetic electron transport in cytochrome b6/f
- GO:0009776, photosynthetic electron transport in plastocyanin
- GO:0010205, photoinhibition
+ GO:0015986, ATP synthesis coupled proton transport
+ GO:0042776, ATP synthesis coupled proton transport (sensu Eukaryota)
+ GO:0042777, ATP synthesis coupled proton transport (sensu Bacteria)

Terms movements under GO Slim term 'protein modification ; GO:0006464'
+ GO:0007225, patched ligand processing

Terms movements under GO Slim term 'lipid metabolism ; GO:0006629'
- GO:0006071, glycerol metabolism
- GO:0006072, glycerol-3-phosphate metabolism
- GO:0006114, glycerol biosynthesis
- GO:0019563, glycerol catabolism
- GO:0019564, aerobic glycerol catabolism
- GO:0019565, aerobic glycerol fermentation
- GO:0019588, glycerol fermentation
- GO:0019589, glycerol fermentation to propane-1,3-diol
+ GO:0042574, retinal metabolism
- GO:0046167, glycerol-3-phosphate biosynthesis
- GO:0046168, glycerol-3-phosphate catabolism

Terms movements under GO Slim term 'response to stress ; GO:0006950'
- GO:0009693, ethylene biosynthesis
- GO:0042218, 1-aminocyclopropane-1-carboxylate biosynthesis

Terms movements under GO Slim term 'organelle organization and biogenesis ; GO:0006996'
+ GO:0000183, chromatin silencing at ribosomal DNA
+ GO:0000722, telomerase-independent telomere maintenance
+ GO:0000723, telomere maintenance
+ GO:0001308, loss of chromatin silencing during replicative cell aging
+ GO:0001672, regulation of chromatin assembly or disassembly
+ GO:0006324, S-phase regulated histone modification
+ GO:0006325, establishment and/or maintenance of chromatin architecture
+ GO:0006333, chromatin assembly or disassembly
+ GO:0006334, nucleosome assembly
+ GO:0006335, DNA replication-dependent nucleosome assembly
+ GO:0006336, DNA replication-independent nucleosome assembly
+ GO:0006337, nucleosome disassembly
+ GO:0006338, chromatin remodeling
+ GO:0006342, chromatin silencing
+ GO:0006343, establishment of chromatin silencing
+ GO:0006344, maintenance of chromatin silencing
+ GO:0006345, loss of chromatin silencing
+ GO:0006346, methylation-dependent chromatin silencing
+ GO:0006348, chromatin silencing at telomere
+ GO:0006625, protein-peroxisome targeting
+ GO:0007000, nucleolus organization and biogenesis
+ GO:0007001, chromosome organization and biogenesis (sensu Eukaryota)
+ GO:0007004, telomerase-dependent telomere maintenance
+ GO:0016233, telomere capping
+ GO:0016558, peroxisome matrix protein import
+ GO:0016568, chromatin modification
+ GO:0016569, covalent chromatin modification
+ GO:0016570, histone modification
+ GO:0016571, histone methylation
+ GO:0016572, histone phosphorylation
+ GO:0016573, histone acetylation
+ GO:0016574, histone ubiquitination
+ GO:0016575, histone deacetylation
+ GO:0016576, histone dephosphorylation
+ GO:0016577, histone demethylation
+ GO:0016578, histone deubiquitination
+ GO:0016582, non-covalent chromatin modification
+ GO:0016584, nucleosome spacing
+ GO:0017126, nucleologenesis
+ GO:0030466, chromatin silencing at silent mating-type cassette
+ GO:0030702, chromatin silencing at centromere
+ GO:0030717, karyosome formation
+ GO:0031048, small RNA-mediated chromatin silencing
+ GO:0031055, chromatin remodeling at centromere
+ GO:0031056, regulation of histone modification
+ GO:0031057, negative regulation of histone modification
+ GO:0031058, positive regulation of histone modification
+ GO:0031059, histone deacetylation at centromere
+ GO:0031060, regulation of histone methylation
+ GO:0031061, negative regulation of histone methylation
+ GO:0031062, positive regulation of histone methylation
+ GO:0031063, regulation of histone deacetylation
+ GO:0031064, negative regulation of histone deacetylation
+ GO:0031065, positive regulation of histone deacetylation
+ GO:0031066, regulation of histone deacetylation at centromere
+ GO:0031067, negative regulation of histone deacetylation at centromere
+ GO:0031068, positive regulation of histone deacetylation at centromere
+ GO:0035041, sperm chromatin decondensation
+ GO:0035042, fertilization, exchange of chromosomal proteins
+ GO:0035065, regulation of histone acetylation
+ GO:0035066, positive regulation of histone acetylation
+ GO:0035067, negative regulation of histone acetylation
+ GO:0035077, ecdysone-mediated polytene chromosome puffing
+ GO:0035079, polytene chromosome puffing
+ GO:0035080, heat shock-mediated polytene chromosome puffing
+ GO:0035092, sperm chromatin condensation
+ GO:0035093, spermatogenesis, exchange of chromosomal proteins
+ GO:0042766, nucleosome mobilization
+ GO:0043007, rDNA maintenance
+ GO:0043044, ATP-dependent chromatin remodeling
+ GO:0043156, chromatin remodeling in response to cation stress
+ GO:0043247, telomere maintenance in response to DNA damage
+ GO:0045046, peroxisome membrane protein import
+ GO:0045798, negative regulation of chromatin assembly or disassembly
+ GO:0045799, positive regulation of chromatin assembly or disassembly
+ GO:0048096, chromatin-mediated maintenance of transcription
+ GO:0048239, negative regulation of telomeric recombination at telomere

Terms movements under GO Slim term 'signal transduction ; GO:0007165'
- GO:0001508, regulation of action potential
- GO:0007272, ionic insulation of neurons by glial cells
- GO:0042552, myelination
- GO:0045759, negative regulation of action potential
- GO:0045760, positive regulation of action potential

Terms movements under GO Slim term 'development ; GO:0007275'
- GO:0001308, loss of chromatin silencing during replicative cell aging
+ GO:0040029, regulation of gene expression, epigenetic

Terms movements under GO Slim term 'physiological process ; GO:0007582'
+ GO:0000768, syncytium formation by plasma membrane fusion
+ GO:0000769, syncytium formation by mitosis without cell division
+ GO:0006810, transport
+ GO:0006948, viral-induced cell-cell fusion
+ GO:0006949, syncytium formation
+ GO:0007114, cell budding
+ GO:0007116, regulation of cell budding
+ GO:0007117, budding cell bud growth
+ GO:0007118, budding cell apical bud growth
+ GO:0007119, budding cell isotropic bud growth
+ GO:0007343, egg activation
+ GO:0007349, cellularization
+ GO:0008283, cell proliferation
+ GO:0009558, cellularization of megagametophyte
+ GO:0009796, cellularization (sensu Metazoa)
+ GO:0009797, cellularization (sensu Magnoliophyta)
+ GO:0016043, cell organization and biogenesis
+ GO:0019725, cell homeostasis
+ GO:0035212, cell competition (sensu Metazoa)
+ GO:0045781, negative regulation of cell budding
+ GO:0045782, positive regulation of cell budding

Terms movements under GO Slim term 'biological_process ; GO:0008150'
- GO:0040029, regulation of gene expression, epigenetic

Terms movements under GO Slim term GO:0008151 (merged into GO:0050875, cellular physiological process)
- GO:0000768, syncytium formation by plasma membrane fusion
- GO:0000769, syncytium formation by mitosis without cell division
- GO:0006810, transport
- GO:0006948, viral-induced cell-cell fusion
- GO:0006949, syncytium formation
- GO:0007114, cell budding
- GO:0007116, regulation of cell budding
- GO:0007117, budding cell bud growth
- GO:0007118, budding cell apical bud growth
- GO:0007119, budding cell isotropic bud growth
- GO:0007349, cellularization
- GO:0008283, cell proliferation
- GO:0009558, cellularization of megagametophyte
- GO:0009796, cellularization (sensu Metazoa)
- GO:0009797, cellularization (sensu Magnoliophyta)
- GO:0016043, cell organization and biogenesis
- GO:0019725, cell homeostasis
- GO:0035212, cell competition (sensu Metazoa)
- GO:0045781, negative regulation of cell budding
- GO:0045782, positive regulation of cell budding

Terms movements under GO Slim term 'metabolism ; GO:0008152'
+ GO:0006071, glycerol metabolism
+ GO:0006072, glycerol-3-phosphate metabolism
+ GO:0006085, acetyl-CoA biosynthesis
+ GO:0006086, acetyl-CoA biosynthesis from pyruvate
- GO:0006118, electron transport
- GO:0006119, oxidative phosphorylation
- GO:0006582, melanin metabolism
+ GO:0008154, actin polymerization and/or depolymerization
- GO:0009404, toxin metabolism
- GO:0015994, chlorophyll metabolism
- GO:0017143, insecticide metabolism
- GO:0018977, 1,1,1-trichloro-2,2-bis-(4'-chlorophenyl)ethane metabolism
- GO:0018978, anaerobic 1,1,1-trichloro-2,2-bis-(4'-chlorophenyl)ethane metabolism
+ GO:0019427, acetyl-CoA biosynthesis from acetate
+ GO:0019431, acetyl-CoA biosynthesis from ethanol
- GO:0030153, bacteriocin immunity
- GO:0030493, bacteriochlorophyll metabolism
+ GO:0030634, carbon fixation by acetyl-CoA pathway
- GO:0035006, melanization defense response
- GO:0035007, regulation of melanization defense response
- GO:0035008, positive regulation of melanization defense response
- GO:0035009, negative regulation of melanization defense response
- GO:0035011, melanotic encapsulation of foreign target
- GO:0042168, heme metabolism
- GO:0042440, pigment metabolism
- GO:0042441, eye pigment metabolism
- GO:0042574, retinal metabolism
- GO:0042810, pheromone metabolism
- GO:0046152, ommochrome metabolism
- GO:0046156, siroheme metabolism
- GO:0046158, ocellus pigment metabolism
- GO:0046160, heme a metabolism
- GO:0046162, heme c metabolism
- GO:0046224, bacteriocin metabolism
- GO:0046492, heme b metabolism
- GO:0048033, heme o metabolism

Terms movements under GO Slim term 'catabolism ; GO:0009056'
+ GO:0050835, iron incorporation into iron-sulfur cluster via tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide
+ GO:0050843, S-adenosylmethionine catabolism

Terms movements under GO Slim term 'biosynthesis ; GO:0009058'
- GO:0001572, lactosylceramide biosynthesis
- GO:0001574, ganglioside biosynthesis
- GO:0001576, globoside biosynthesis
- GO:0006085, acetyl-CoA biosynthesis
- GO:0006086, acetyl-CoA biosynthesis from pyruvate
- GO:0006655, phosphatidylglycerol biosynthesis
- GO:0006656, phosphatidylcholine biosynthesis
- GO:0006657, CDP-choline pathway
- GO:0006659, phosphatidylserine biosynthesis
- GO:0006661, phosphatidylinositol biosynthesis
- GO:0006663, platelet activating factor biosynthesis
- GO:0006669, sphinganine-1-phosphate biosynthesis
- GO:0006679, glucosylceramide biosynthesis
- GO:0006682, galactosylceramide biosynthesis
- GO:0006686, sphingomyelin biosynthesis
- GO:0006688, glycosphingolipid biosynthesis
- GO:0006694, steroid biosynthesis
- GO:0006695, cholesterol biosynthesis
- GO:0006696, ergosterol biosynthesis
- GO:0008299, isoprenoid biosynthesis
- GO:0008610, lipid biosynthesis
- GO:0008654, phospholipid biosynthesis
- GO:0009241, polyisoprenoid biosynthesis
- GO:0009247, glycolipid biosynthesis
+ GO:0009832, cell wall biosynthesis (sensu Magnoliophyta)
+ GO:0009833, primary cell wall biosynthesis (sensu Magnoliophyta)
+ GO:0009834, secondary cell wall biosynthesis (sensu Magnoliophyta)
+ GO:0009920, cell plate formation (sensu Magnoliophyta)
+ GO:0010215, cellulose microfibril organization
- GO:0016091, prenol biosynthesis
- GO:0016094, polyprenol biosynthesis
- GO:0016126, sterol biosynthesis
- GO:0016129, phytosteroid biosynthesis
- GO:0016132, brassinosteroid biosynthesis
- GO:0019375, galactolipid biosynthesis
- GO:0019408, dolichol biosynthesis
- GO:0019427, acetyl-CoA biosynthesis from acetate
- GO:0019431, acetyl-CoA biosynthesis from ethanol
- GO:0030148, sphingolipid biosynthesis
- GO:0030634, carbon fixation by acetyl-CoA pathway
- GO:0043048, dolichyl monophosphate biosynthesis
- GO:0045017, glycerolipid biosynthesis
- GO:0045337, farnesyl diphosphate biosynthesis
- GO:0046460, neutral lipid biosynthesis
- GO:0046467, membrane lipid biosynthesis
- GO:0046474, glycerophospholipid biosynthesis
- GO:0046476, glycosylceramide biosynthesis
- GO:0046489, phosphoinositide biosynthesis
- GO:0046511, sphinganine biosynthesis
- GO:0046512, sphingosine biosynthesis
- GO:0046513, ceramide biosynthesis
- GO:0046520, sphingoid biosynthesis
- GO:0050992, dimethylallyl diphosphate biosynthesis

Terms movements under GO Slim term 'response to external stimulus ; GO:0009605'
- GO:0009693, ethylene biosynthesis
- GO:0042218, 1-aminocyclopropane-1-carboxylate biosynthesis

Terms movements under GO Slim term 'response to biotic stimulus ; GO:0009607'
- GO:0009693, ethylene biosynthesis
- GO:0042218, 1-aminocyclopropane-1-carboxylate biosynthesis

Terms movements under GO Slim term 'protein transport ; GO:0015031'
+ GO:0016560, peroxisome matrix protein import, docking
+ GO:0016561, peroxisome matrix protein import, translocation
+ GO:0016562, peroxisome matrix protein import, receptor recycling

Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043'
- GO:0000183, chromatin silencing at ribosomal DNA
- GO:0000722, telomerase-independent telomere maintenance
- GO:0000723, telomere maintenance
- GO:0001308, loss of chromatin silencing during replicative cell aging
- GO:0001672, regulation of chromatin assembly or disassembly
- GO:0006324, S-phase regulated histone modification
- GO:0006325, establishment and/or maintenance of chromatin architecture
- GO:0006333, chromatin assembly or disassembly
- GO:0006334, nucleosome assembly
- GO:0006335, DNA replication-dependent nucleosome assembly
- GO:0006336, DNA replication-independent nucleosome assembly
- GO:0006337, nucleosome disassembly
- GO:0006338, chromatin remodeling
- GO:0006342, chromatin silencing
- GO:0006343, establishment of chromatin silencing
- GO:0006344, maintenance of chromatin silencing
- GO:0006345, loss of chromatin silencing
- GO:0006346, methylation-dependent chromatin silencing
- GO:0006348, chromatin silencing at telomere
- GO:0007000, nucleolus organization and biogenesis
- GO:0007001, chromosome organization and biogenesis (sensu Eukaryota)
- GO:0007004, telomerase-dependent telomere maintenance
- GO:0016233, telomere capping
- GO:0016568, chromatin modification
- GO:0016569, covalent chromatin modification
- GO:0016570, histone modification
- GO:0016571, histone methylation
- GO:0016572, histone phosphorylation
- GO:0016573, histone acetylation
- GO:0016574, histone ubiquitination
- GO:0016575, histone deacetylation
- GO:0016576, histone dephosphorylation
- GO:0016577, histone demethylation
- GO:0016578, histone deubiquitination
- GO:0016582, non-covalent chromatin modification
- GO:0016584, nucleosome spacing
- GO:0017126, nucleologenesis
- GO:0030466, chromatin silencing at silent mating-type cassette
- GO:0030702, chromatin silencing at centromere
- GO:0030717, karyosome formation
- GO:0031048, small RNA-mediated chromatin silencing
- GO:0031055, chromatin remodeling at centromere
- GO:0031056, regulation of histone modification
- GO:0031057, negative regulation of histone modification
- GO:0031058, positive regulation of histone modification
- GO:0031059, histone deacetylation at centromere
- GO:0031060, regulation of histone methylation
- GO:0031061, negative regulation of histone methylation
- GO:0031062, positive regulation of histone methylation
- GO:0031063, regulation of histone deacetylation
- GO:0031064, negative regulation of histone deacetylation
- GO:0031065, positive regulation of histone deacetylation
- GO:0031066, regulation of histone deacetylation at centromere
- GO:0031067, negative regulation of histone deacetylation at centromere
- GO:0031068, positive regulation of histone deacetylation at centromere
- GO:0035041, sperm chromatin decondensation
- GO:0035042, fertilization, exchange of chromosomal proteins
- GO:0035065, regulation of histone acetylation
- GO:0035066, positive regulation of histone acetylation
- GO:0035067, negative regulation of histone acetylation
- GO:0035077, ecdysone-mediated polytene chromosome puffing
- GO:0035079, polytene chromosome puffing
- GO:0035080, heat shock-mediated polytene chromosome puffing
- GO:0035092, sperm chromatin condensation
- GO:0035093, spermatogenesis, exchange of chromosomal proteins
- GO:0042766, nucleosome mobilization
- GO:0043007, rDNA maintenance
- GO:0043044, ATP-dependent chromatin remodeling
- GO:0043156, chromatin remodeling in response to cation stress
- GO:0043247, telomere maintenance in response to DNA damage
- GO:0045798, negative regulation of chromatin assembly or disassembly
- GO:0045799, positive regulation of chromatin assembly or disassembly
- GO:0048096, chromatin-mediated maintenance of transcription
- GO:0048239, negative regulation of telomeric recombination at telomere

Terms movements under GO Slim term 'protein metabolism ; GO:0019538'
+ GO:0000245, spliceosome assembly
+ GO:0000348, nuclear mRNA branch site recognition
+ GO:0000352, trans assembly of SL containing precatalytic spliceosome
+ GO:0000354, cis assembly of pre-catalytic spliceosome(3)
+ GO:0000360, cis assembly of U2-type pre-catalytic spliceosome
+ GO:0000361, cis assembly of U12-type pre-catalytic spliceosome
+ GO:0000368, U2-type nuclear mRNA 5'-splice site recognition
+ GO:0000369, U12-type nuclear mRNA 5'-splice site recognition
+ GO:0000370, U2-type nuclear mRNA branch site recognition
+ GO:0000371, U12-type nuclear mRNA branch site recognition
+ GO:0000382, U12-type nuclear mRNA 3'-splice site recognition
+ GO:0000383, U2-type nuclear mRNA 3'-splice site recognition
+ GO:0000389, nuclear mRNA 3'-splice site recognition
+ GO:0000390, spliceosome dissembly
+ GO:0000391, U2-type spliceosome dissembly
+ GO:0000392, U12-type spliceosome dissembly
+ GO:0000395, nuclear mRNA 5'-splice site recognition
+ GO:0000707, meiotic DNA recombinase assembly
+ GO:0000730, DNA recombinase assembly
+ GO:0006334, nucleosome assembly
+ GO:0006335, DNA replication-dependent nucleosome assembly
+ GO:0006336, DNA replication-independent nucleosome assembly
+ GO:0006337, nucleosome disassembly
+ GO:0006376, mRNA splice site selection
+ GO:0007146, meiotic recombination nodule assembly
- GO:0008154, actin polymerization and/or depolymerization
+ GO:0016584, nucleosome spacing
+ GO:0030241, muscle thick filament assembly
+ GO:0031034, myosin filament assembly
+ GO:0031035, myosin filament disassembly
+ GO:0031036, myosin II filament assembly
+ GO:0031037, myosin II filament disassembly
+ GO:0042139, early meiotic recombination nodule assembly
+ GO:0042140, late meiotic recombination nodule assembly

Terms movements under GO Slim term 'secondary metabolism ; GO:0019748'
+ GO:0006582, melanin metabolism
+ GO:0006583, melanin biosynthesis from tyrosine
+ GO:0006714, sesquiterpenoid metabolism
+ GO:0006715, farnesol biosynthesis
+ GO:0006716, juvenile hormone metabolism
+ GO:0006718, juvenile hormone biosynthesis
+ GO:0006719, juvenile hormone catabolism
+ GO:0006721, terpenoid metabolism
+ GO:0006722, triterpenoid metabolism
+ GO:0006726, eye pigment biosynthesis
+ GO:0006727, ommochrome biosynthesis
+ GO:0006782, protoporphyrinogen IX biosynthesis
+ GO:0006783, heme biosynthesis
+ GO:0006784, heme a biosynthesis
+ GO:0006785, heme b biosynthesis
+ GO:0006786, heme c biosynthesis
+ GO:0006788, heme oxidation
+ GO:0007556, regulation of juvenile hormone metabolism
+ GO:0007557, regulation of juvenile hormone biosynthesis
+ GO:0008055, ocellus pigment biosynthesis
+ GO:0009403, toxin biosynthesis
+ GO:0009404, toxin metabolism
+ GO:0009407, toxin catabolism
+ GO:0009685, gibberellic acid metabolism
+ GO:0009686, gibberellic acid biosynthesis
+ GO:0009687, abscisic acid metabolism
+ GO:0009688, abscisic acid biosynthesis
+ GO:0010028, xanthophyll cycle
+ GO:0010115, regulation of abscisic acid biosynthesis
+ GO:0010116, positive regulation of abscisic acid biosynthesis
+ GO:0010142, mevalonate pathway
+ GO:0015994, chlorophyll metabolism
+ GO:0015995, chlorophyll biosynthesis
+ GO:0015996, chlorophyll catabolism
+ GO:0016063, rhodopsin biosynthesis
+ GO:0016098, monoterpenoid metabolism
+ GO:0016099, monoterpenoid biosynthesis
+ GO:0016100, monoterpenoid catabolism
+ GO:0016101, diterpenoid metabolism
+ GO:0016102, diterpenoid biosynthesis
+ GO:0016103, diterpenoid catabolism
+ GO:0016104, triterpenoid biosynthesis
+ GO:0016105, triterpenoid catabolism
+ GO:0016106, sesquiterpenoid biosynthesis
+ GO:0016107, sesquiterpenoid catabolism
+ GO:0016108, tetraterpenoid metabolism
+ GO:0016109, tetraterpenoid biosynthesis
+ GO:0016110, tetraterpenoid catabolism
+ GO:0016111, polyterpenoid metabolism
+ GO:0016112, polyterpenoid biosynthesis
+ GO:0016113, polyterpenoid catabolism
+ GO:0016114, terpenoid biosynthesis
+ GO:0016115, terpenoid catabolism
+ GO:0016116, carotenoid metabolism
+ GO:0016117, carotenoid biosynthesis
+ GO:0016118, carotenoid catabolism
+ GO:0016119, carotene metabolism
+ GO:0016120, carotene biosynthesis
+ GO:0016121, carotene catabolism
+ GO:0016122, xanthophyll metabolism
+ GO:0016123, xanthophyll biosynthesis
+ GO:0016124, xanthophyll catabolism
+ GO:0016134, saponin metabolism
+ GO:0016135, saponin biosynthesis
+ GO:0016136, saponin catabolism
+ GO:0016487, farnesol metabolism
+ GO:0016488, farnesol catabolism
+ GO:0017143, insecticide metabolism
+ GO:0018977, 1,1,1-trichloro-2,2-bis-(4'-chlorophenyl)ethane metabolism
+ GO:0018978, anaerobic 1,1,1-trichloro-2,2-bis-(4'-chlorophenyl)ethane metabolism
+ GO:0019352, protoporphyrinogen IX biosynthesis from glycine
+ GO:0019353, protoporphyrinogen IX biosynthesis from glutamate
+ GO:0019354, siroheme biosynthesis
+ GO:0019741, pentacyclic triterpenoid catabolism
+ GO:0019742, pentacyclic triterpenoid metabolism
+ GO:0019743, hopanoid catabolism
+ GO:0019744, hopanoid metabolism
+ GO:0019745, pentacyclic triterpenoid biosynthesis
+ GO:0019746, hopanoid biosynthesis
+ GO:0030152, bacteriocin biosynthesis
+ GO:0030153, bacteriocin immunity
+ GO:0030493, bacteriochlorophyll metabolism
+ GO:0030494, bacteriochlorophyll biosynthesis
+ GO:0030495, bacteriochlorophyll catabolism
+ GO:0035006, melanization defense response
+ GO:0035007, regulation of melanization defense response
+ GO:0035008, positive regulation of melanization defense response
+ GO:0035009, negative regulation of melanization defense response
+ GO:0035011, melanotic encapsulation of foreign target
+ GO:0042167, heme catabolism
+ GO:0042168, heme metabolism
+ GO:0042188, 1,1,1-trichloro-2,2-bis-(4'-chlorophenyl)ethane catabolism
+ GO:0042438, melanin biosynthesis
+ GO:0042440, pigment metabolism
+ GO:0042441, eye pigment metabolism
+ GO:0042574, retinal metabolism
+ GO:0042810, pheromone metabolism
+ GO:0042811, pheromone biosynthesis
+ GO:0042812, pheromone catabolism
+ GO:0045487, gibberellic acid catabolism
+ GO:0045928, negative regulation of juvenile hormone metabolism
+ GO:0045929, positive regulation of juvenile hormone metabolism
+ GO:0045952, regulation of juvenile hormone catabolism
+ GO:0045968, negative regulation of juvenile hormone biosynthesis
+ GO:0045969, positive regulation of juvenile hormone biosynthesis
+ GO:0045970, negative regulation of juvenile hormone catabolism
+ GO:0045971, positive regulation of juvenile hormone catabolism
+ GO:0046148, pigment biosynthesis
+ GO:0046149, pigment catabolism
+ GO:0046150, melanin catabolism
+ GO:0046151, eye pigment catabolism
+ GO:0046152, ommochrome metabolism
+ GO:0046153, ommochrome catabolism
+ GO:0046154, rhodopsin metabolism
+ GO:0046155, rhodopsin catabolism
+ GO:0046156, siroheme metabolism
+ GO:0046157, siroheme catabolism
+ GO:0046158, ocellus pigment metabolism
+ GO:0046159, ocellus pigment catabolism
+ GO:0046160, heme a metabolism
+ GO:0046161, heme a catabolism
+ GO:0046162, heme c metabolism
+ GO:0046163, heme c catabolism
+ GO:0046224, bacteriocin metabolism
+ GO:0046225, bacteriocin catabolism
+ GO:0046345, abscisic acid catabolism
+ GO:0046492, heme b metabolism
+ GO:0046701, insecticide catabolism
+ GO:0048021, regulation of melanin biosynthesis
+ GO:0048022, negative regulation of melanin biosynthesis
+ GO:0048023, positive regulation of melanin biosynthesis
+ GO:0048033, heme o metabolism
+ GO:0048034, heme o biosynthesis
+ GO:0048035, heme o catabolism

Terms movements under GO Slim term 'cell differentiation ; GO:0030154'
+ GO:0007277, pole cell development
+ GO:0007279, pole cell formation



New terms in cellular_component ontology (9 new terms)
GO:0001931	GO:0005886	MGI	D	1035336	uropod
GO:0031074	GO:0005622	MAH	D	860709	nucleocytoplasmic shuttling complex
GO:0031080	GO:0005635	MAH	D	1081397	Nup107-160 complex
GO:0031082	GO:0005829	MAH	D	1084993	BLOC complex
GO:0031083	GO:0005829	MAH	D	1084993	BLOC-1 complex
GO:0031084	GO:0005829	MAH	D	1084993	BLOC-2 complex
GO:0031085	GO:0005829	MAH	D	1084993	BLOC-3 complex
GO:0035301	GO:0005622	FB	D	1035336	Hedgehog signaling complex
GO:0043291	GO:0005737	JL	D	1080975	RAVE complex


Term name changes in cellular_component ontology
GO:0005780: intra-peroxisomal peripheral membrane --> extrinsic to intraperoxisomal membrane
GO:0009344: nitrite reductase complex (NAD(P)H) --> nitrite reductase complex [NAD(P)H]
GO:0009352: dihydrolipoamide dehydrogenase complex --> dihydrolipoyl dehydrogenase complex
GO:0009382: imidazoleglycerol-phosphate synthase complex --> imidazoleglycerol phosphate synthase complex


New definitions for cellular_component ontology terms (25 new definitions)
GO:0005780, extrinsic to intraperoxisomal membrane
GO:0005914, spot adherens junction
GO:0005916, fascia adherens
GO:0005917, nephrocyte junction
GO:0005919, pleated septate junction
GO:0005920, smooth septate junction
GO:0005926, connecting hemi-adherens junction
GO:0005927, muscle tendon junction
GO:0005928, apical hemi-adherens junction
GO:0005946, alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)
GO:0005948, acetolactate synthase complex
GO:0008074, guanylate cyclase complex, soluble
GO:0008247, 2-acetyl-1-alkylglycerophosphocholine esterase complex
GO:0009316, 3-isopropylmalate dehydratase complex
GO:0009319, cytochrome o ubiquinol oxidase complex
GO:0009320, phosphoribosylaminoimidazole carboxylase complex
GO:0009321, alkyl hydroperoxide reductase complex
GO:0009324, D-amino-acid dehydrogenase complex
GO:0009330, DNA topoisomerase complex (ATP-hydrolyzing)
GO:0009334, 3-phenylpropionate dioxygenase complex
GO:0009337, sulfite reductase complex (NADPH)
GO:0009344, nitrite reductase complex [NAD(P)H]
GO:0009352, dihydrolipoyl dehydrogenase complex
GO:0009358, polyphosphate kinase complex
GO:0009382, imidazoleglycerol phosphate synthase complex


Term movements in cellular_component ontology:
Terms movements under GO Slim term 'intracellular ; GO:0005622'
+ GO:0042563, importin alpha-subunit nuclear export complex
+ GO:0042564, NLS-dependent protein nuclear import complex
+ GO:0042565, RNA nuclear export complex

Terms movements under GO Slim term 'nuclear membrane ; GO:0005635'
- GO:0042563, importin alpha-subunit nuclear export complex
- GO:0042564, NLS-dependent protein nuclear import complex
- GO:0042565, RNA nuclear export complex



New terms in molecular_function ontology (12 new terms)
GO:0031071	GO:0016740	MAH	D	1076705	cysteine desulfurase
GO:0031072	GO:0005515	MAH	D	1076769	heat shock protein binding
GO:0031073	GO:0003824	MAH	D	1077714	cholesterol 26-hydroxylase activity
GO:0031078	GO:0016787	MAH	D	1085068	histone deacetylase activity (H3-K14 specific)
GO:0031079	GO:0008233	MAH	D	1085079	picornain 3C activity
GO:0035299	GO:0016301	FB	D	1076107	inositol pentakisphosphate 2-kinase activity
GO:0035300	GO:0016301	FB	D	1076107	inositol trisphosphate 5/6-kinase activity
GO:0035302	GO:0003824	FB	D	1082858	ecdysteroid 25-hydroxylase activity
GO:0043273	GO:0016787	JL	D	1035336	CTPase activity
GO:0043274	GO:0005515	JL	D	1035336	phospholipase binding
GO:0043275	GO:0008233	JL	D	1078233	glutamate carboxypeptidase II activity
GO:0043287	GO:0005488	JL	D	1080270	poly(3-hydroxyalkanoate) binding


New obsoletions in molecular_function ontology
GO:0005396, transmembrane conductance regulator activity: its meaning was ambiguous, it was undefined and its position in the tree wrong.
GO:0016910, SAP kinase 3 activity: describes a gene product.
GO:0016911, SAP kinase 4 activity: describes a gene product.
GO:0016912, SAP kinase 5 activity: there are no known gene products that would be described as 'SAP kinase 5', and the term name implies that it refers to a gene product.


Term name changes in molecular_function ontology
GO:0008308: voltage-dependent ion-selective channel activity --> voltage-gated ion-selective channel activity
GO:0015458: low voltage-dependent potassium channel auxiliary protein activity --> low voltage-gated potassium channel auxiliary protein activity
GO:0015482: voltage-dependent anion channel porin activity --> voltage-gated anion channel porin activity
GO:0046609: voltage-sensitive sulfate antiporter activity --> voltage-gated sulfate antiporter activity


New definitions for molecular_function ontology terms (16 new definitions)
GO:0004711, ribosomal protein S6 kinase activity
GO:0005052, peroxisome targeting signal-1 receptor activity
GO:0005053, peroxisome targeting signal-2 receptor activity
GO:0005396, transmembrane conductance regulator activity
GO:0008827, cytochrome o ubiquinol oxidase activity
GO:0016496, substance P receptor activity
GO:0016497, substance K receptor activity
GO:0016498, neuromedin K receptor activity
GO:0016910, SAP kinase 3 activity
GO:0016911, SAP kinase 4 activity
GO:0016912, SAP kinase 5 activity
GO:0017002, activin receptor activity
GO:0017170, KU70 binding
GO:0018754, ammelide aminohydrolase activity
GO:0018756, ammeline aminohydrolase activity
GO:0042071, leucokinin receptor activity


Term movements in molecular_function ontology:
Terms movements under GO Slim term 'kinase activity ; GO:0016301'
+ GO:0050516, inositol-polyphosphate multikinase activity

Terms movements under GO Slim term 'transferase activity ; GO:0016740'
- GO:0050516, inositol-polyphosphate multikinase activity



SourceForge items closed this month:

SF id	Resolution	SF item title	GO ids added, if any
1003468	Fixed	children of GO:0042626	[none]
1011414	Fixed	tpv: ethylene biosynthesis  possibly?	GO:0043272
1027363	Fixed	Definition/parentage of "ionic insulation of neurons..."	[none]
1036019	None	GO:0006266 : DNA ligation	[none]
1068216	Accepted	change of reponse to arsenate	[none]
1070915	Accepted	segmentation: new term request	GO:0035282
1071986	Fixed	tvp: chromosome organization and biogenesis	GO:0051276-51277
1072672	Accepted	CNS/brain/appendage/leg segmentation new terms	GO:0035283-35292
1073218	Fixed	muscle contraction TPV	[none]
1075931	Fixed	missing parents:peroxisome receptor docking	[none]
1076031	Fixed	inositol/phosphatidylinositol definitions and parentage edit	GO:0051273-51275
1076044	Works For Me	missing relationship/meitoic joint molecule formation	[none]
1076107	Fixed	'multi-function' inositol enzymes	GO:0035299-35300
1076591	Fixed	Dbxref for GO:4855 and GO:4854	[none]
1076705	Accepted	EC 2.8.1.7	GO:0031071
1076769	Accepted	ntr heat shock protein binding	GO:0031072
1076800	Fixed	query possible missing parent ERAD/proteasomal	[none]
1077704	Rejected	miossing parent GO:0045005 : maintenanc..	[none]
1077714	Accepted	cholesterol 26-hydroxylase activity	GO:0031073
1078233	Accepted	GO term for 3.4.17.21?	GO:0043275
1078311	Works For Me	missing parent for vesicle med tr	[none]
1079599	Accepted	GO:0031028 : septation initiation signaling	[none]
1079875	Fixed	Semi-defined term GO:0009334	[none]
1079944	Fixed	cant find aminoadipate reductase	[none]
1080270	Accepted	polyhydroxyalkanoate GO terms	GO:0043286-43287
1080975	Accepted	RAVE complex - New term for component ontology	GO:0043291
1080977	Accepted	deadenylation-independent decapping - Process term & parent	GO:0031086-31087
1081397	Accepted	 Nup107-120 complex (NPC subcomplex)	GO:0031080-31081
1081980	Accepted	COMPASS complex add synonyms	[none]
1082858	Accepted	ecdysteroid 25-hydroxylase activity	GO:0035302
1083111	Fixed	synonym/term string are same for fgf receptor sign. pathway	[none]
1084993	Accepted	New complex term (BLOC-1)	GO:0031082-31085
1085068	Accepted	ntr: histone deacetylase activity (H3-K14 specific)	GO:0031078
1085079	Accepted	EC 3.4.22.28	GO:0031079
1085103	Fixed	tpv :RNA interference ?	[none]
1085145	Works For Me	'protein complex' parentage for 'tubulin'?	[none]
1085188	Accepted	regulation of dephosphorylation	GO:0035303-35308
1087237	Fixed	cell expansion as alias	[none]
1088652	Fixed	"positive regulation of muscle contraction" redefinition	[none]
578091	Fixed	definitions for enzyme complexes	[none]
814460	Fixed	very very urgent...metabolism parentage	[none]
852632	Fixed	oogenesis definitions in wrong place	[none]
857612	Fixed	cuticle biosynthesis GO:0042335	[none]
860709	Fixed	parentage of 'RNA nuclear export complex' ; GO:0042565	GO:0031074
908969	Out of Date	necessarily is_part violations	[none]
939379	Accepted	tubes	GO:0035239 GO:0035295-35298
948605	Accepted	tree under eye morphogenesis needs a massage	GO:0031075-31077
981441	Accepted	SAP kinase 5 activity [16912] obsoletion?	[none]



Statistics:
biological_process: 9254 terms, 96.2% defined (8899 terms defined)
cellular_component: 1510 terms, 93.7% defined (1415 terms defined)
molecular_function: 7455 terms, 89.9% defined (6699 terms defined)
Total: 18219 terms, 93.4% defined (17013 terms defined)


Term errors
none