! parsing: GO:0001403 ! No parse for: GO:0001403 invasive growth in response to glucose limitation ! parsing: GO:0001502 ! No parse for: GO:0001502 cartilage condensation ! parsing: GO:0001503 ! parse: GO:0001503 using "bone biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0001459]) [-2] ! parse: GO:0001503 using "bone formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0001459]) [-2] ! parse: GO:0001503 using "bone formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001459]) [-2] ! no existing xp def ! def: "The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance." ! PROPOSED: biosynthetic process that OBO_REL:results_in_formation_of bone [cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0001459])] [Term] id: GO:0001503 ! ossification intersection_of: GO:0009058 ! biosynthetic process intersection_of: OBO_REL:results_in_formation_of MA:0001459 ! bone ! seconds spent parsing GO:0001503: 5.11 ! parsing: GO:0001525 ! No parse for: GO:0001525 angiogenesis ! parsing: GO:0001541 ! No parse for: GO:0001541 ovarian follicle development ! parsing: GO:0001543 ! No parse for: GO:0001543 ovarian follicle rupture ! parsing: GO:0001548 ! No parse for: GO:0001548 follicular fluid formation in ovarian follicle antrum ! parsing: GO:0001550 ! No parse for: GO:0001550 ovarian cumulus expansion ! parsing: GO:0001551 ! No parse for: GO:0001551 ovarian follicle endowment ! parsing: GO:0001552 ! No parse for: GO:0001552 ovarian follicle atresia ! parsing: GO:0001568 ! parse: GO:0001568 using "blood vessel development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000060]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of blood vessel [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000060])] [Term] id: GO:0001568 ! blood vessel development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000060 ! blood vessel ! seconds spent parsing GO:0001568: 2.06 ! parsing: GO:0001654 ! parse: GO:0001654 using "eye development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000261]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of eye [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000261])] [Term] id: GO:0001654 ! eye development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000261 ! eye synonym: "camera-type eye development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001654: 2.09 ! parsing: GO:0001657 ! No parse for: GO:0001657 ureteric bud development ! parsing: GO:0001658 ! No parse for: GO:0001658 ureteric bud branching ! parsing: GO:0001751 ! parse: GO:0001751 using "eye photoreceptor cell differentiation (sensu Endopterygota)" => cdef(GO:0046530, [OBO_REL:results_in_developmental_progression_of=MA:0000261]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires the specialized features of an eye photoreceptor cell." ! PROPOSED: photoreceptor cell differentiation that OBO_REL:results_in_developmental_progression_of eye [cdef(GO:0046530, [OBO_REL:results_in_developmental_progression_of=MA:0000261])] [Term] id: GO:0001751 ! compound eye photoreceptor cell differentiation intersection_of: GO:0046530 ! photoreceptor cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000261 ! eye synonym: "camera-type eye photoreceptor cell differentiation" EXACT [OBOL:automatic] synonym: "camera-type eye photoreceptor cell differentiation (sensu Endopterygota)" EXACT [OBOL:automatic] synonym: "photoreceptor cell differentiation (sensu Endopterygota) of a camera-type eye" EXACT [OBOL:automatic] synonym: "photoreceptor cell differentiation (sensu Endopterygota) of an camera-type eye" EXACT [OBOL:automatic] synonym: "photoreceptor cell differentiation (sensu Endopterygota) of the camera-type eye" EXACT [OBOL:automatic] synonym: "photoreceptor cell differentiation of a camera-type eye" EXACT [OBOL:automatic] synonym: "photoreceptor cell differentiation of an camera-type eye" EXACT [OBOL:automatic] synonym: "photoreceptor cell differentiation of the camera-type eye" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001751: 8.55 ! parsing: GO:0001752 ! No parse for: GO:0001752 compound eye photoreceptor fate commitment ! parsing: GO:0001767 ! parse: GO:0001767 using "establishment of lymphocyte polarity" => cdef(GO:0030010, [regulates=cdef(PATO:0001769, [OBO_REL:inheres_in=CL:0000542])]) [-3] ! parse: GO:0001767 using "establishment of lymphocyte polarity" => cdef(GO:0030011, [regulates=cdef(PATO:0001769, [OBO_REL:inheres_in=CL:0000542])]) [-3] ! parse: GO:0001767 using "lymphocyte polarization" => cdef(GO:0008150, [OBO_REL:results_in_change_to=cdef(PATO:0001661, [OBO_REL:inheres_in=CL:0000542])]) [-3] ! no existing xp def ! def: "The directed orientation of lymphocyte signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with an appropriate activating cell." ! PROPOSED: maintenance of cell polarity that regulates cdef(PATO:0001769, [OBO_REL:inheres_in=CL:0000542]) [cdef(GO:0030011, [regulates=cdef(PATO:0001769, [OBO_REL:inheres_in=CL:0000542])])] [Term] id: GO:0001767 ! establishment of lymphocyte polarity intersection_of: GO:0030011 ! maintenance of cell polarity intersection_of: regulates _:lymphocyte_polarity synonym: "establishment of lymphocyte cell polarity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001767: 2.94 ! parsing: GO:0001778 ! No parse for: GO:0001778 plasma membrane repair ! parsing: GO:0001822 ! parse: GO:0001822 using "kidney development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000368]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of kidney [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000368])] [Term] id: GO:0001822 ! kidney development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000368 ! kidney ! seconds spent parsing GO:0001822: 1.37 ! parsing: GO:0001889 ! parse: GO:0001889 using "liver development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000358]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of liver [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000358])] [Term] id: GO:0001889 ! liver development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000358 ! liver ! seconds spent parsing GO:0001889: 1.37 ! parsing: GO:0001890 ! parse: GO:0001890 using "placenta development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000386]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of placenta [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000386])] [Term] id: GO:0001890 ! placenta development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000386 ! placenta ! seconds spent parsing GO:0001890: 2.19 ! parsing: GO:0001942 ! parse: GO:0001942 using "hair follicle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000154]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of hair follicle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000154])] [Term] id: GO:0001942 ! hair follicle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000154 ! hair follicle ! seconds spent parsing GO:0001942: 1.36 ! parsing: GO:0001944 ! No parse for: GO:0001944 vasculature development ! parsing: GO:0001945 ! No parse for: GO:0001945 lymph vessel development ! parsing: GO:0001946 ! No parse for: GO:0001946 lymphangiogenesis ! parsing: GO:0001947 ! No parse for: GO:0001947 heart looping ! parsing: GO:0001949 ! No parse for: GO:0001949 sebaceous gland cell differentiation ! parsing: GO:0001955 ! parse: GO:0001955 using "blood vessel maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000060]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of blood vessel [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000060])] [Term] id: GO:0001955 ! blood vessel maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000060 ! blood vessel ! seconds spent parsing GO:0001955: 2.05 ! parsing: GO:0001974 ! parse: GO:0001974 using "blood vessel remodeling" => cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=MA:0000060]) [-2] ! no existing xp def ! def: "The reorganization or renovation of existing blood vessels." ! PROPOSED: developmental process that OBO_REL:results_in_remodeling_of blood vessel [cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=MA:0000060])] [Term] id: GO:0001974 ! blood vessel remodeling intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_remodeling_of MA:0000060 ! blood vessel ! seconds spent parsing GO:0001974: 2.05 ! parsing: GO:0001976 ! No parse for: GO:0001976 regulation of systemic arterial blood pressure by neurological process ! parsing: GO:0001990 ! No parse for: GO:0001990 regulation of systemic arterial blood pressure by hormone ! parsing: GO:0001992 ! No parse for: GO:0001992 regulation of systemic arterial blood pressure by vasopressin ! parsing: GO:0002026 ! No parse for: GO:0002026 regulation of the force of heart contraction ! parsing: GO:0002035 ! No parse for: GO:0002035 brain renin-angiotensin system ! parsing: GO:0002043 ! parse: GO:0002043 using "blood vessel endothelial cell proliferation during sprouting angiogenesis" => cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000071]), [OBO_REL:happens_during=GO:0002040]) [-4] ! no existing xp def ! def: "The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population during sprouting angiogenesis." ! PROPOSED: cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000071]) that OBO_REL:happens_during sprouting angiogenesis [cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000071]), [OBO_REL:happens_during=GO:0002040])] [Term] id: GO:0002043 ! blood vessel endothelial cell proliferation during sprouting angiogenesis intersection_of: _:blood_vessel_endothelial_cell_cell_proliferation intersection_of: OBO_REL:happens_during GO:0002040 ! sprouting angiogenesis ! seconds spent parsing GO:0002043: 4.69 ! parsing: GO:0002072 ! No parse for: GO:0002072 optic cup morphogenesis involved in camera-type eye development ! parsing: GO:0002074 ! parse: GO:0002074 using "extraocular skeletal muscle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001271]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of extraocular skeletal muscle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001271])] [Term] id: GO:0002074 ! extraocular skeletal muscle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001271 ! extraocular skeletal muscle ! seconds spent parsing GO:0002074: 3.18 ! parsing: GO:0002086 ! parse: GO:0002086 using "diaphragm contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001904]) [-2] ! no existing xp def ! def: "A process whereby force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. This process occurs in the diaphragm. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The diaphragm is a striated muscle that is necessary for the process of respiratory gaseous exchange." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to diaphragm [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001904])] [Term] id: GO:0002086 ! diaphragm contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0001904 ! diaphragm ! seconds spent parsing GO:0002086: 1.46 ! parsing: GO:0002248 ! No parse for: GO:0002248 connective tissue replacement during inflammatory response ! parsing: GO:0002340 ! No parse for: GO:0002340 central B cell selection ! parsing: GO:0002341 ! No parse for: GO:0002341 central B cell anergy ! parsing: GO:0002342 ! No parse for: GO:0002342 central B cell deletion ! parsing: GO:0002348 ! No parse for: GO:0002348 central B cell positive selection ! parsing: GO:0002353 ! No parse for: GO:0002353 plasma kallikrein-kinin cascade ! parsing: GO:0002354 ! No parse for: GO:0002354 central B cell negative selection ! parsing: GO:0002376 ! No parse for: GO:0002376 immune system process ! parsing: GO:0002463 ! No parse for: GO:0002463 central tolerance induction to nonself antigen ! parsing: GO:0002508 ! No parse for: GO:0002508 central tolerance induction ! parsing: GO:0002509 ! No parse for: GO:0002509 central tolerance induction to self antigen ! parsing: GO:0002510 ! No parse for: GO:0002510 central B cell tolerance induction ! parsing: GO:0002511 ! No parse for: GO:0002511 central B cell receptor editing ! parsing: GO:0002512 ! No parse for: GO:0002512 central T cell tolerance induction ! parsing: GO:0002518 ! No parse for: GO:0002518 lymphocyte chemotaxis across high endothelial venule ! parsing: GO:0002520 ! parse: GO:0002520 using "immune system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002711]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of immune system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002711])] [Term] id: GO:0002520 ! immune system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0002711 ! immune system ! seconds spent parsing GO:0002520: 1.37 ! parsing: GO:0002530 ! No parse for: GO:0002530 regulation of systemic arterial blood pressure during acute phase response ! parsing: GO:0003007 ! parse: GO:0003007 using "heart morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000072]) [-2] ! no existing xp def ! def: "The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of heart [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000072])] [Term] id: GO:0003007 ! heart morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000072 ! heart ! seconds spent parsing GO:0003007: 1.72 ! parsing: GO:0003008 ! No parse for: GO:0003008 system process ! parsing: GO:0003009 ! parse: GO:0003009 using "skeletal muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000165]) [-2] ! no existing xp def ! def: "A process whereby force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to skeletal muscle [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000165])] [Term] id: GO:0003009 ! skeletal muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0003009: 3.76 ! parsing: GO:0003012 ! No parse for: GO:0003012 muscle system process ! parsing: GO:0003013 ! No parse for: GO:0003013 circulatory system process ! parsing: GO:0003014 ! No parse for: GO:0003014 renal system process ! parsing: GO:0003015 ! No parse for: GO:0003015 heart process ! parsing: GO:0003016 ! No parse for: GO:0003016 respiratory system process ! parsing: GO:0003017 ! No parse for: GO:0003017 lymph circulation ! parsing: GO:0003018 ! No parse for: GO:0003018 vascular process in circulatory system ! parsing: GO:0003019 ! No parse for: GO:0003019 central nervous system control of baroreceptor feedback ! parsing: GO:0003026 ! No parse for: GO:0003026 regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback ! parsing: GO:0003027 ! No parse for: GO:0003027 regulation of systemic arterial blood pressure by carotid body chemoreceptor ! parsing: GO:0003044 ! No parse for: GO:0003044 regulation of systemic arterial blood pressure mediated by a chemical signal ! parsing: GO:0003045 ! No parse for: GO:0003045 regulation of systemic arterial blood pressure by physical factors ! parsing: GO:0003046 ! No parse for: GO:0003046 regulation of systemic arterial blood pressure by stress relaxation ! parsing: GO:0003047 ! No parse for: GO:0003047 regulation of systemic arterial blood pressure by epinephrine ! parsing: GO:0003048 ! No parse for: GO:0003048 regulation of systemic arterial blood pressure by norepinephrine ! parsing: GO:0003049 ! No parse for: GO:0003049 regulation of systemic arterial blood pressure by capillary fluid shift ! parsing: GO:0003050 ! No parse for: GO:0003050 regulation of systemic arterial blood pressure by atrial natriuretic peptide ! parsing: GO:0003068 ! No parse for: GO:0003068 regulation of systemic arterial blood pressure by acetylcholine ! parsing: GO:0003081 ! No parse for: GO:0003081 regulation of systemic arterial blood pressure by renin-angiotensin ! parsing: GO:0006034 ! No parse for: GO:0006034 cuticle chitin metabolic process ! parsing: GO:0006035 ! parse: GO:0006035 using "cuticle chitin anabolism" => cdef(GO:0006031, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthesis" => cdef(GO:0006031, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthetic process" => cdef(GO:0006031, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin formation" => cdef(GO:0006031, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin synthesis" => cdef(GO:0006031, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of cuticle chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in cuticles." ! PROPOSED: chitin biosynthetic process that OBO_REL:results_in_formation_of cuticle [cdef(GO:0006031, [OBO_REL:results_in_formation_of=MA:0002704])] [Term] id: GO:0006035 ! cuticle chitin biosynthetic process intersection_of: GO:0006031 ! chitin biosynthetic process intersection_of: OBO_REL:results_in_formation_of MA:0002704 ! cuticle ! seconds spent parsing GO:0006035: 10.05 ! parsing: GO:0006036 ! No parse for: GO:0006036 cuticle chitin catabolic process ! parsing: GO:0006723 ! No parse for: GO:0006723 cuticle hydrocarbon biosynthetic process ! parsing: GO:0006726 ! parse: GO:0006726 using "eye pigment anabolism" => cdef(GO:0046148, [OBO_REL:results_in_formation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment biosynthesis" => cdef(GO:0046148, [OBO_REL:results_in_formation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment biosynthetic process" => cdef(GO:0046148, [OBO_REL:results_in_formation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment formation" => cdef(GO:0046148, [OBO_REL:results_in_formation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment synthesis" => cdef(GO:0046148, [OBO_REL:results_in_formation_of=MA:0000261]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye." ! PROPOSED: pigment biosynthetic process that OBO_REL:results_in_formation_of eye [cdef(GO:0046148, [OBO_REL:results_in_formation_of=MA:0000261])] [Term] id: GO:0006726 ! eye pigment biosynthetic process intersection_of: GO:0046148 ! pigment biosynthetic process intersection_of: OBO_REL:results_in_formation_of MA:0000261 ! eye synonym: "camera-type eye pigment anabolism" EXACT [OBOL:automatic] synonym: "camera-type eye pigment biosynthesis" EXACT [OBOL:automatic] synonym: "camera-type eye pigment biosynthetic process" EXACT [OBOL:automatic] synonym: "camera-type eye pigment formation" EXACT [OBOL:automatic] synonym: "camera-type eye pigment synthesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006726: 13.68 ! parsing: GO:0006847 ! parse: GO:0006847 using "plasma membrane acetate transport" => cdef(GO:0006846, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! no existing xp def ! def: "The directed movement of acetate across a plasma membrane." ! PROPOSED: acetate transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0006846, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0006847 ! plasma membrane acetate transport intersection_of: GO:0006846 ! acetate transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane acetate transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane acetate transport" EXACT [OBOL:automatic] synonym: "plasmalemma acetate transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006847: 3.07 ! parsing: GO:0006849 ! parse: GO:0006849 using "plasma membrane pyruvate transport" => cdef(GO:0006848, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! no existing xp def ! def: "The directed movement of pyruvate, 2-oxopropanoate, across a plasma membrane." ! PROPOSED: pyruvate transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0006848, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0006849 ! plasma membrane pyruvate transport intersection_of: GO:0006848 ! pyruvate transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane pyruvate transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane pyruvate transport" EXACT [OBOL:automatic] synonym: "plasmalemma pyruvate transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006849: 3.07 ! parsing: GO:0006856 ! No parse for: GO:0006856 eye pigment precursor transport ! parsing: GO:0006897 ! No parse for: GO:0006897 endocytosis ! parsing: GO:0006936 ! No parse for: GO:0006936 muscle contraction ! parsing: GO:0006939 ! parse: GO:0006939 using "smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:has_quality=PATO:0000701]) [-2] ! parse: GO:0006939 using "smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000166]) [-2] ! parse: GO:0006939 using "smooth muscle contraction" => cdef(cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000015]), [OBO_REL:has_quality=PATO:0000701]) [-4] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to smooth muscle [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000166])] [Term] id: GO:0006939 ! smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0000166 ! smooth muscle ! seconds spent parsing GO:0006939: 2.84 ! parsing: GO:0007009 ! parse: GO:0007009 using "plasma membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005886]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to plasma membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005886])] [Term] id: GO:0007009 ! plasma membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005886 ! plasma membrane synonym: "cell membrane organization and biogenesis" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane organization and biogenesis" EXACT [OBOL:automatic] synonym: "plasmalemma organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007009: 5.28 ! parsing: GO:0007173 ! No parse for: GO:0007173 epidermal growth factor receptor signaling pathway ! parsing: GO:0007174 ! No parse for: GO:0007174 epidermal growth factor ligand processing ! parsing: GO:0007270 ! parse: GO:0007270 using "nerve-nerve synaptic transmission" => cdef(GO:0007268, [OBO_REL:has_agent=MA:0000217, OBO_REL:has_agent=MA:0000217]) [-3] ! no existing xp def ! def: "The process of communication from a neuron to another neuron across a synapse." ! PROPOSED: synaptic transmission that OBO_REL:has_agent nerve and OBO_REL:has_agent nerve [cdef(GO:0007268, [OBO_REL:has_agent=MA:0000217, OBO_REL:has_agent=MA:0000217])] [Term] id: GO:0007270 ! nerve-nerve synaptic transmission intersection_of: GO:0007268 ! synaptic transmission intersection_of: OBO_REL:has_agent MA:0000217 ! nerve intersection_of: OBO_REL:has_agent MA:0000217 ! nerve ! seconds spent parsing GO:0007270: 1.71 ! parsing: GO:0007283 ! No parse for: GO:0007283 spermatogenesis ! parsing: GO:0007284 ! No parse for: GO:0007284 spermatogonial cell division ! parsing: GO:0007288 ! No parse for: GO:0007288 sperm axoneme assembly ! parsing: GO:0007289 ! No parse for: GO:0007289 spermatid nuclear differentiation ! parsing: GO:0007290 ! No parse for: GO:0007290 spermatid nuclear elongation ! parsing: GO:0007291 ! No parse for: GO:0007291 sperm individualization ! parsing: GO:0007294 ! No parse for: GO:0007294 germarium-derived oocyte fate determination ! parsing: GO:0007297 ! parse: GO:0007297 using "ovarian follicle cell migration" => cdef(cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000477]), [OBO_REL:unfolds_in=MA:0000384]) [-4] ! no existing xp def ! def: "The directed movement of ovarian follicle cells that takes place during oogenesis. During egg chamber formation, follicle cells migrate to envelop the germ-line cysts and move in between cysts. At stage 10B, follicle cells migrate centripetally between the nurse cells and the oocyte, enclosing the anterior of the egg." ! PROPOSED: cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000477]) that OBO_REL:unfolds_in ovary [cdef(cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000477]), [OBO_REL:unfolds_in=MA:0000384])] [Term] id: GO:0007297 ! ovarian follicle cell migration intersection_of: _:follicle_cell_cell_cell_migration intersection_of: OBO_REL:unfolds_in MA:0000384 ! ovary synonym: "ovarian follicle cell cell cell migration" EXACT [OBOL:automatic] synonym: "ovarian follicle cell cell migration" EXACT [OBOL:automatic] synonym: "ovarie follicle cell cell cell migration" EXACT [OBOL:automatic] synonym: "ovarie follicle cell cell migration" EXACT [OBOL:automatic] synonym: "ovarie follicle cell migration" EXACT [OBOL:automatic] synonym: "ovaries follicle cell cell cell migration" EXACT [OBOL:automatic] synonym: "ovaries follicle cell cell migration" EXACT [OBOL:automatic] synonym: "ovaries follicle cell migration" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007297: 7.75 ! parsing: GO:0007299 ! parse: GO:0007299 using "ovarian follicle cell adhesion" => cdef(GO:0022610, [OBO_REL:results_in_connection_of=cdef(CL:0000477, [OBO_REL:part_of=MA:0000384])]) [-3] ! parse: GO:0007299 using "ovarian follicle cell adhesion" => cdef(cdef(GO:0022610, [OBO_REL:results_in_connection_of=CL:0000477]), [OBO_REL:unfolds_in=MA:0000384]) [-4] ! no existing xp def ! def: "The attachment of a somatic follicle cell to another somatic follicle cell or to its substratum, the germline cells." ! PROPOSED: biological adhesion that OBO_REL:results_in_connection_of cdef(CL:0000477, [OBO_REL:part_of=MA:0000384]) [cdef(GO:0022610, [OBO_REL:results_in_connection_of=cdef(CL:0000477, [OBO_REL:part_of=MA:0000384])])] [Term] id: GO:0007299 ! ovarian follicle cell adhesion intersection_of: GO:0022610 ! biological adhesion intersection_of: OBO_REL:results_in_connection_of _:ovarian_follicle_cell_cell synonym: "ovarian follicle cell cell adhesion" EXACT [OBOL:automatic] synonym: "ovarian follicle cell cell biological adhesion" EXACT [OBOL:automatic] synonym: "ovarie follicle cell adhesion" EXACT [OBOL:automatic] synonym: "ovarie follicle cell cell adhesion" EXACT [OBOL:automatic] synonym: "ovarie follicle cell cell biological adhesion" EXACT [OBOL:automatic] synonym: "ovaries follicle cell adhesion" EXACT [OBOL:automatic] synonym: "ovaries follicle cell cell adhesion" EXACT [OBOL:automatic] synonym: "ovaries follicle cell cell biological adhesion" EXACT [OBOL:automatic] synonym: "ovary follicle cell adhesion" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007299: 7.88 ! parsing: GO:0007300 ! parse: GO:0007300 using "ovarian nurse cell to oocyte transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=cdef(CL:0000026, [OBO_REL:part_of=MA:0000384]), OBO_REL:results_in_transport_to=CL:0000023]) [-4] ! parse: GO:0007300 using "ovarian nurse cell to oocyte transport" => cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_from=CL:0000026, OBO_REL:results_in_transport_to=CL:0000023]), [OBO_REL:unfolds_in=MA:0000384]) [-5] ! no existing xp def ! def: "Transfer of constituents synthesized in the ovarian nurse cells to the oocyte, through the ring canals, as the egg chamber is growing." ! PROPOSED: transport that OBO_REL:results_in_transport_from cdef(CL:0000026, [OBO_REL:part_of=MA:0000384]) and OBO_REL:results_in_transport_to oocyte [cdef(GO:0006810, [OBO_REL:results_in_transport_from=cdef(CL:0000026, [OBO_REL:part_of=MA:0000384]), OBO_REL:results_in_transport_to=CL:0000023])] [Term] id: GO:0007300 ! ovarian nurse cell to oocyte transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_from _:ovarian_nurse_cell intersection_of: OBO_REL:results_in_transport_to CL:0000023 ! oocyte synonym: "ovarie nurse cell to oocyte transport" EXACT [OBOL:automatic] synonym: "ovaries nurse cell to oocyte transport" EXACT [OBOL:automatic] synonym: "ovary nurse cell to oocyte transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007300: 8.3 ! parsing: GO:0007301 ! parse: GO:0007301 using "ovarian ring canal formation" => cdef(GO:0030725, [OBO_REL:unfolds_in=MA:0000384]) [-2] ! no existing xp def ! def: "Assembly of the intercellular bridges that connect the germ-line cells of a female cyst." ! PROPOSED: ring canal formation that OBO_REL:unfolds_in ovary [cdef(GO:0030725, [OBO_REL:unfolds_in=MA:0000384])] [Term] id: GO:0007301 ! ovarian ring canal formation intersection_of: GO:0030725 ! ring canal formation intersection_of: OBO_REL:unfolds_in MA:0000384 ! ovary synonym: "ovarie ring canal formation" EXACT [OBOL:automatic] synonym: "ovaries ring canal formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007301: 4.97 ! parsing: GO:0007312 ! No parse for: GO:0007312 oocyte nucleus migration during oocyte axis determination ! parsing: GO:0007314 ! No parse for: GO:0007314 oocyte anterior/posterior axis determination ! parsing: GO:0007321 ! No parse for: GO:0007321 sperm displacement ! parsing: GO:0007342 ! No parse for: GO:0007342 fusion of sperm to egg plasma membrane ! parsing: GO:0007356 ! No parse for: GO:0007356 thorax and anterior abdomen determination ! parsing: GO:0007396 ! No parse for: GO:0007396 suture of dorsal opening ! parsing: GO:0007399 ! parse: GO:0007399 using "nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000016]) [-2] ! parse: GO:0007399 using "nervous system development" => cdef(GO:0048731, [OBO_REL:unfolds_in=MA:0000217]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state." ! PROPOSED: system development that OBO_REL:unfolds_in nerve [cdef(GO:0048731, [OBO_REL:unfolds_in=MA:0000217])] [Term] id: GO:0007399 ! nervous system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:unfolds_in MA:0000217 ! nerve ! seconds spent parsing GO:0007399: 8.02 ! parsing: GO:0007417 ! parse: GO:0007417 using "central nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000167]) [-2] ! parse: GO:0007417 using "central nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of central nervous system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000167])] [Term] id: GO:0007417 ! central nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000167 ! central nervous system ! seconds spent parsing GO:0007417: 2.74 ! parsing: GO:0007420 ! parse: GO:0007420 using "brain development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000168]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.)." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of brain [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000168])] [Term] id: GO:0007420 ! brain development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000168 ! brain ! seconds spent parsing GO:0007420: 1.38 ! parsing: GO:0007422 ! parse: GO:0007422 using "peripheral nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000218]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of peripheral nervous system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000218])] [Term] id: GO:0007422 ! peripheral nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000218 ! peripheral nervous system ! seconds spent parsing GO:0007422: 1.38 ! parsing: GO:0007423 ! parse: GO:0007423 using "sensory organ development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000017]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of sensory organ [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000017])] [Term] id: GO:0007423 ! sensory organ development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000017 ! sensory organ ! seconds spent parsing GO:0007423: 1.38 ! parsing: GO:0007424 ! parse: GO:0007424 using "open tracheal system development" => cdef(cdef(GO:0048731, [OBO_REL:unfolds_in=MA:0000441]), [OBO_REL:has_quality=PATO:0000610]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles." ! PROPOSED: cdef(GO:0048731, [OBO_REL:unfolds_in=MA:0000441]) that OBO_REL:has_quality open [cdef(cdef(GO:0048731, [OBO_REL:unfolds_in=MA:0000441]), [OBO_REL:has_quality=PATO:0000610])] [Term] id: GO:0007424 ! open tracheal system development intersection_of: _:tracheal_system_development intersection_of: OBO_REL:has_quality PATO:0000610 ! open ! seconds spent parsing GO:0007424: 11.53 ! parsing: GO:0007425 ! No parse for: GO:0007425 epithelial cell fate determination, open tracheal system ! parsing: GO:0007426 ! No parse for: GO:0007426 tracheal outgrowth, open tracheal system ! parsing: GO:0007427 ! No parse for: GO:0007427 epithelial cell migration, open tracheal system ! parsing: GO:0007431 ! parse: GO:0007431 using "salivary gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000346]) [-2] ! parse: GO:0007431 using "salivary gland development" => cdef(GO:0048732, [OBO_REL:unfolds_in=MA:0002507]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity." ! PROPOSED: gland development that OBO_REL:unfolds_in saliva [cdef(GO:0048732, [OBO_REL:unfolds_in=MA:0002507])] [Term] id: GO:0007431 ! salivary gland development intersection_of: GO:0048732 ! gland development intersection_of: OBO_REL:unfolds_in MA:0002507 ! saliva ! seconds spent parsing GO:0007431: 5.51 ! parsing: GO:0007432 ! No parse for: GO:0007432 salivary gland boundary specification ! parsing: GO:0007435 ! parse: GO:0007435 using "salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000346]) [-2] ! parse: GO:0007435 using "salivary gland morphogenesis" => cdef(GO:0022612, [OBO_REL:unfolds_in=MA:0002507]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: gland morphogenesis that OBO_REL:unfolds_in saliva [cdef(GO:0022612, [OBO_REL:unfolds_in=MA:0002507])] [Term] id: GO:0007435 ! salivary gland morphogenesis intersection_of: GO:0022612 ! gland morphogenesis intersection_of: OBO_REL:unfolds_in MA:0002507 ! saliva ! seconds spent parsing GO:0007435: 5.77 ! parsing: GO:0007440 ! parse: GO:0007440 using "foregut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001526]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the foregut are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of foregut [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001526])] [Term] id: GO:0007440 ! foregut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001526 ! foregut ! seconds spent parsing GO:0007440: 1.64 ! parsing: GO:0007442 ! parse: GO:0007442 using "hindgut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001527]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hindgut [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001527])] [Term] id: GO:0007442 ! hindgut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001527 ! hindgut ! seconds spent parsing GO:0007442: 1.64 ! parsing: GO:0007455 ! No parse for: GO:0007455 eye-antennal disc morphogenesis ! parsing: GO:0007494 ! parse: GO:0007494 using "midgut development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001564]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the midgut over time, from its formation to the mature structure. The midgut is the middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of midgut [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001564])] [Term] id: GO:0007494 ! midgut development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001564 ! midgut ! seconds spent parsing GO:0007494: 1.38 ! parsing: GO:0007506 ! parse: GO:0007506 using "gonadal mesoderm development" => cdef(GO:0007498, [OBO_REL:unfolds_in=MA:0002420]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism." ! PROPOSED: mesoderm development that OBO_REL:unfolds_in gonad [cdef(GO:0007498, [OBO_REL:unfolds_in=MA:0002420])] [Term] id: GO:0007506 ! gonadal mesoderm development intersection_of: GO:0007498 ! mesoderm development intersection_of: OBO_REL:unfolds_in MA:0002420 ! gonad ! seconds spent parsing GO:0007506: 4.97 ! parsing: GO:0007507 ! parse: GO:0007507 using "heart development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000072]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of heart [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000072])] [Term] id: GO:0007507 ! heart development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000072 ! heart ! seconds spent parsing GO:0007507: 1.38 ! parsing: GO:0007517 ! parse: GO:0007517 using "muscle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000015]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of muscle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000015])] [Term] id: GO:0007517 ! muscle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000015 ! muscle ! seconds spent parsing GO:0007517: 1.38 ! parsing: GO:0007519 ! parse: GO:0007519 using "skeletal muscle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000165]) [-2] ! no existing xp def ! def: "The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of skeletal muscle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000165])] [Term] id: GO:0007519 ! skeletal muscle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0007519: 3.77 ! parsing: GO:0007589 ! No parse for: GO:0007589 body fluid secretion ! parsing: GO:0007592 ! No parse for: GO:0007592 protein-based cuticle development ! parsing: GO:0007593 ! No parse for: GO:0007593 chitin-based cuticle tanning ! parsing: GO:0007596 ! No parse for: GO:0007596 blood coagulation ! parsing: GO:0007597 ! No parse for: GO:0007597 blood coagulation, intrinsic pathway ! parsing: GO:0007598 ! No parse for: GO:0007598 blood coagulation, extrinsic pathway ! parsing: GO:0008015 ! No parse for: GO:0008015 blood circulation ! parsing: GO:0008052 ! No parse for: GO:0008052 sensory organ boundary specification ! parsing: GO:0008057 ! No parse for: GO:0008057 eye pigment granule organization and biogenesis ! parsing: GO:0008103 ! No parse for: GO:0008103 oocyte microtubule cytoskeleton polarization ! parsing: GO:0008217 ! parse: GO:0008217 using "blood pressure regulation" => cdef(GO:0065007, [regulates=cdef(PATO:0001025, [OBO_REL:inheres_in=MA:0000059])]) [-3] ! parse: GO:0008217 using "regulation of blood pressure" => cdef(GO:0065007, [regulates=cdef(PATO:0001025, [OBO_REL:inheres_in=MA:0000059])]) [-3] ! no existing xp def ! def: "The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure." ! PROPOSED: biological regulation that regulates cdef(PATO:0001025, [OBO_REL:inheres_in=MA:0000059]) [cdef(GO:0065007, [regulates=cdef(PATO:0001025, [OBO_REL:inheres_in=MA:0000059])])] [Term] id: GO:0008217 ! regulation of blood pressure intersection_of: GO:0065007 ! biological regulation intersection_of: regulates _:cdef__PATO_0001025_____OBO_REL_inheres_in___MA_0000059___ synonym: "biological regulation of blood pressure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0008217: 4.17 ! parsing: GO:0008258 ! No parse for: GO:0008258 head involution ! parsing: GO:0008335 ! No parse for: GO:0008335 ovarian ring canal stabilization ! parsing: GO:0008366 ! No parse for: GO:0008366 axon ensheathment ! parsing: GO:0008406 ! parse: GO:0008406 using "gonad development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002420]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of gonad [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002420])] [Term] id: GO:0008406 ! gonad development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0002420 ! gonad ! seconds spent parsing GO:0008406: 1.38 ! parsing: GO:0008544 ! parse: GO:0008544 using "epidermis development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000153]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of epidermis [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000153])] [Term] id: GO:0008544 ! epidermis development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000153 ! epidermis ! seconds spent parsing GO:0008544: 1.38 ! parsing: GO:0009553 ! parse: GO:0009553 using "female gametophyte development" => cdef(GO:0048229, [OBO_REL:has_quality=PATO:0000383]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the embryo sac over time, from its formation to the mature structure. The process begins with the meiosis of the megasporocyte to form four haploid megaspores. Three of the megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. The two polar nuclei fuse resulting in a mononucleate diploid endosperm mother cell. The three antipodal cells degenerate." ! PROPOSED: gametophyte development that OBO_REL:has_quality female [cdef(GO:0048229, [OBO_REL:has_quality=PATO:0000383])] [Term] id: GO:0009553 ! embryo sac development intersection_of: GO:0048229 ! gametophyte development intersection_of: OBO_REL:has_quality PATO:0000383 ! female ! seconds spent parsing GO:0009553: 2.93 ! parsing: GO:0009555 ! parse: GO:0009555 using "male gametophyte development" => cdef(GO:0048229, [OBO_REL:has_quality=PATO:0000384]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates." ! PROPOSED: gametophyte development that OBO_REL:has_quality male [cdef(GO:0048229, [OBO_REL:has_quality=PATO:0000384])] [Term] id: GO:0009555 ! pollen development intersection_of: GO:0048229 ! gametophyte development intersection_of: OBO_REL:has_quality PATO:0000384 ! male ! seconds spent parsing GO:0009555: 7.14 ! parsing: GO:0009559 ! No parse for: GO:0009559 embryo sac central cell differentiation ! parsing: GO:0009562 ! No parse for: GO:0009562 embryo sac nuclear migration ! parsing: GO:0010171 ! No parse for: GO:0010171 body morphogenesis ! parsing: GO:0014730 ! parse: GO:0014730 using "skeletal muscle regeneration at neuromuscular junction" => cdef(GO:0043403, [OBO_REL:unfolds_around=GO:0031594]) [-2] ! parse: GO:0014730 using "skeletal muscle regeneration at neuromuscular junction" => cdef(cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=MA:0000165]), [OBO_REL:unfolds_around=GO:0031594]) [-4] ! no existing xp def ! def: "The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage at the neuromuscular junction. Regeneration of neuromuscular junctions occurs in an orderly way and relies on communication between nerve and muscle. Skeletal myofibres regenerate after injury and they form neuro-muscular junctions with motor axons similar to normal ones. Regenerating myofibres develop within the basal lamina sheaths (satellite cells) of original myofibres." ! PROPOSED: skeletal muscle regeneration that OBO_REL:unfolds_around neuromuscular junction [cdef(GO:0043403, [OBO_REL:unfolds_around=GO:0031594])] [Term] id: GO:0014730 ! skeletal muscle regeneration at neuromuscular junction intersection_of: GO:0043403 ! skeletal muscle regeneration intersection_of: OBO_REL:unfolds_around GO:0031594 ! neuromuscular junction ! seconds spent parsing GO:0014730: 8.0 ! parsing: GO:0014732 ! No parse for: GO:0014732 skeletal muscle atrophy ! parsing: GO:0014734 ! No parse for: GO:0014734 skeletal muscle hypertrophy ! parsing: GO:0014805 ! parse: GO:0014805 using "smooth muscle adaptation" => cdef(GO:0043500, [OBO_REL:has_quality=PATO:0000701]) [-2] ! no existing xp def ! def: "Processes by which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities." ! PROPOSED: muscle adaptation that OBO_REL:has_quality smooth [cdef(GO:0043500, [OBO_REL:has_quality=PATO:0000701])] [Term] id: GO:0014805 ! smooth muscle adaptation intersection_of: GO:0043500 ! muscle adaptation intersection_of: OBO_REL:has_quality PATO:0000701 ! smooth ! seconds spent parsing GO:0014805: 3.23 ! parsing: GO:0014806 ! parse: GO:0014806 using "smooth muscle hyperplasia" => cdef(GO:0014900, [OBO_REL:has_quality=PATO:0000701]) [-2] ! no existing xp def ! def: "A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ." ! PROPOSED: muscle hyperplasia that OBO_REL:has_quality smooth [cdef(GO:0014900, [OBO_REL:has_quality=PATO:0000701])] [Term] id: GO:0014806 ! smooth muscle hyperplasia intersection_of: GO:0014900 ! muscle hyperplasia intersection_of: OBO_REL:has_quality PATO:0000701 ! smooth ! seconds spent parsing GO:0014806: 3.22 ! parsing: GO:0014824 ! parse: GO:0014824 using "artery smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000708]) [-2] ! parse: GO:0014824 using "artery smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000064])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the artery. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The artery is a vessel carrying blood away from the heart." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to artery smooth muscle [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000708])] [Term] id: GO:0014824 ! artery smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0000708 ! artery smooth muscle ! seconds spent parsing GO:0014824: 2.96 ! parsing: GO:0014825 ! parse: GO:0014825 using "stomach fundus smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0001612])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the fundus of stomach. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fundus is the portion of the stomach that lies above the cardiac notch." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to cdef(MA:0000166, [OBO_REL:part_of=MA:0001612]) [cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0001612])])] [Term] id: GO:0014825 ! stomach fundus smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to _:cdef__MA_0000166_____OBO_REL_part_of___MA_0001612___ ! seconds spent parsing GO:0014825: 3.02 ! parsing: GO:0014826 ! parse: GO:0014826 using "vein smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000067])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the vein. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The vein is a vessel carrying blood away from the capillary beds." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to cdef(MA:0000166, [OBO_REL:part_of=MA:0000067]) [cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000067])])] [Term] id: GO:0014826 ! vein smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to _:cdef__MA_0000166_____OBO_REL_part_of___MA_0000067___ ! seconds spent parsing GO:0014826: 2.42 ! parsing: GO:0014827 ! parse: GO:0014827 using "intestine smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001539]) [-2] ! parse: GO:0014827 using "intestine smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000328])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the intestine. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The intestine is the section of the alimentary canal from the stomach to the anal canal. It includes the large intestine and small intestine." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to intestine smooth muscle [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001539])] [Term] id: GO:0014827 ! intestine smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0001539 ! intestine smooth muscle ! seconds spent parsing GO:0014827: 2.96 ! parsing: GO:0014830 ! parse: GO:0014830 using "arteriole smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000706]) [-2] ! parse: GO:0014830 using "arteriole smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000063])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the arteriole. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The arteriole is the smallest division of the artery located between the muscular arteries and the capillaries." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to arteriole smooth muscle [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000706])] [Term] id: GO:0014830 ! arteriole smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0000706 ! arteriole smooth muscle ! seconds spent parsing GO:0014830: 2.96 ! parsing: GO:0014831 ! No parse for: GO:0014831 gastro-intestinal system smooth muscle contraction ! parsing: GO:0014832 ! parse: GO:0014832 using "urinary bladder smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001697]) [-2] ! parse: GO:0014832 using "urinary bladder smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000380])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to urinary bladder smooth muscle [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001697])] [Term] id: GO:0014832 ! urinary bladder smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0001697 ! urinary bladder smooth muscle ! seconds spent parsing GO:0014832: 2.97 ! parsing: GO:0014845 ! parse: GO:0014845 using "stomach body smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0002559])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the body of stomach. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to cdef(MA:0000166, [OBO_REL:part_of=MA:0002559]) [cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0002559])])] [Term] id: GO:0014845 ! stomach body smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to _:cdef__MA_0000166_____OBO_REL_part_of___MA_0002559___ ! seconds spent parsing GO:0014845: 3.02 ! parsing: GO:0014846 ! parse: GO:0014846 using "esophagus smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001573]) [-2] ! parse: GO:0014846 using "esophagus smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000352])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the esophagus. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The esophagus is the muscular membranous segment between the pharynx and the stomach in the upper gastrointestinal tract." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to esophagus smooth muscle [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001573])] [Term] id: GO:0014846 ! esophagus smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0001573 ! esophagus smooth muscle ! seconds spent parsing GO:0014846: 2.96 ! parsing: GO:0014848 ! No parse for: GO:0014848 urinary tract smooth muscle contraction ! parsing: GO:0014849 ! parse: GO:0014849 using "ureter smooth muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000378])]) [-3] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the ureter. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to cdef(MA:0000166, [OBO_REL:part_of=MA:0000378]) [cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000166, [OBO_REL:part_of=MA:0000378])])] [Term] id: GO:0014849 ! ureter smooth muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to _:cdef__MA_0000166_____OBO_REL_part_of___MA_0000378___ ! seconds spent parsing GO:0014849: 2.42 ! parsing: GO:0014887 ! No parse for: GO:0014887 cardiac muscle adaptation ! parsing: GO:0014889 ! No parse for: GO:0014889 muscle atrophy ! parsing: GO:0014890 ! parse: GO:0014890 using "smooth muscle atrophy" => cdef(GO:0014889, [OBO_REL:has_quality=PATO:0000701]) [-2] ! no existing xp def ! def: "A process, occurring in smooth muscle, that is characterized by a decrease in protein content, fibre diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse." ! PROPOSED: muscle atrophy that OBO_REL:has_quality smooth [cdef(GO:0014889, [OBO_REL:has_quality=PATO:0000701])] [Term] id: GO:0014890 ! smooth muscle atrophy intersection_of: GO:0014889 ! muscle atrophy intersection_of: OBO_REL:has_quality PATO:0000701 ! smooth ! seconds spent parsing GO:0014890: 1.97 ! parsing: GO:0014895 ! parse: GO:0014895 using "smooth muscle hypertrophy" => cdef(GO:0014896, [OBO_REL:has_quality=PATO:0000701]) [-2] ! no existing xp def ! def: "The enlargement or overgrowth of all or part of an organ due to an increase in size of its smooth muscle cells without cell division. Physiological hypertrophy is a normal process during development, and can also occur in mature structures on demand. In the uterus, smooth muscle cells undergo hypertrophy during pregnancy." ! PROPOSED: muscle hypertrophy that OBO_REL:has_quality smooth [cdef(GO:0014896, [OBO_REL:has_quality=PATO:0000701])] [Term] id: GO:0014895 ! smooth muscle hypertrophy intersection_of: GO:0014896 ! muscle hypertrophy intersection_of: OBO_REL:has_quality PATO:0000701 ! smooth ! seconds spent parsing GO:0014895: 3.13 ! parsing: GO:0014896 ! No parse for: GO:0014896 muscle hypertrophy ! parsing: GO:0014898 ! No parse for: GO:0014898 cardiac muscle hypertrophy ! parsing: GO:0014899 ! No parse for: GO:0014899 cardiac muscle atrophy ! parsing: GO:0014900 ! No parse for: GO:0014900 muscle hyperplasia ! parsing: GO:0015679 ! parse: GO:0015679 using "plasma membrane copper ion transport" => cdef(GO:0006825, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! no existing xp def ! def: "The directed movement of copper ions across the plasma membrane." ! PROPOSED: copper ion transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0006825, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0015679 ! plasma membrane copper ion transport intersection_of: GO:0006825 ! copper ion transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane copper ion transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane copper ion transport" EXACT [OBOL:automatic] synonym: "plasmalemma copper ion transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015679: 5.43 ! parsing: GO:0015911 ! parse: GO:0015911 using "plasma membrane long-chain fatty acid transport" => cdef(GO:0015909, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! no existing xp def ! def: "The directed movement of long-chain fatty acids across the plasma membrane." ! PROPOSED: long-chain fatty acid transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0015909, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0015911 ! plasma membrane long-chain fatty acid transport intersection_of: GO:0015909 ! long-chain fatty acid transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane long-chain fatty acid transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane long-chain fatty acid transport" EXACT [OBOL:automatic] synonym: "plasmalemma long-chain fatty acid transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015911: 3.45 ! parsing: GO:0016203 ! No parse for: GO:0016203 muscle attachment ! parsing: GO:0016360 ! No parse for: GO:0016360 sensory organ precursor cell fate determination ! parsing: GO:0019094 ! No parse for: GO:0019094 pole plasm mRNA localization ! parsing: GO:0019095 ! No parse for: GO:0019095 pole plasm mitochondrial rRNA localization ! parsing: GO:0019096 ! No parse for: GO:0019096 pole plasm mitochondrial lrRNA localization ! parsing: GO:0019097 ! No parse for: GO:0019097 pole plasm mitochondrial srRNA localization ! parsing: GO:0021510 ! parse: GO:0021510 using "spinal cord development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000216]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of spinal cord [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000216])] [Term] id: GO:0021510 ! spinal cord development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000216 ! spinal cord ! seconds spent parsing GO:0021510: 1.39 ! parsing: GO:0021511 ! parse: GO:0021511 using "spinal cord patterning" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=MA:0000216]) [-2] ! no existing xp def ! def: "The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord." ! PROPOSED: pattern specification process that OBO_REL:results_in_specification_of spinal cord [cdef(GO:0007389, [OBO_REL:results_in_specification_of=MA:0000216])] [Term] id: GO:0021511 ! spinal cord patterning intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_specification_of MA:0000216 ! spinal cord ! seconds spent parsing GO:0021511: 1.48 ! parsing: GO:0021512 ! No parse for: GO:0021512 spinal cord anterior/posterior patterning ! parsing: GO:0021513 ! No parse for: GO:0021513 spinal cord dorsal/ventral patterning ! parsing: GO:0021518 ! No parse for: GO:0021518 spinal cord commissural neuron specification ! parsing: GO:0021519 ! No parse for: GO:0021519 spinal cord association neuron specification ! parsing: GO:0021520 ! No parse for: GO:0021520 spinal cord motor neuron cell fate specification ! parsing: GO:0021522 ! No parse for: GO:0021522 spinal cord motor neuron differentiation ! parsing: GO:0021527 ! No parse for: GO:0021527 spinal cord association neuron differentiation ! parsing: GO:0021529 ! No parse for: GO:0021529 spinal cord oligodendrocyte cell differentiation ! parsing: GO:0021530 ! No parse for: GO:0021530 spinal cord oligodendrocyte cell fate specification ! parsing: GO:0021536 ! parse: GO:0021536 using "diencephalon development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000171]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of diencephalon [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000171])] [Term] id: GO:0021536 ! diencephalon development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000171 ! diencephalon ! seconds spent parsing GO:0021536: 1.39 ! parsing: GO:0021537 ! parse: GO:0021537 using "telencephalon development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000183]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of telencephalon [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000183])] [Term] id: GO:0021537 ! telencephalon development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000183 ! telencephalon ! seconds spent parsing GO:0021537: 1.39 ! parsing: GO:0021538 ! parse: GO:0021538 using "epithalamus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000172]) [-2] ! no existing xp def ! def: "The progression of the epithalamus over time from its initial formation until its mature state. The epithalamus is the small dorsomedial area of the thalamus including the habenular nuclei and associated fiber bundles, the pineal body, and the epithelial roof of the third ventricle." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of epithalamus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000172])] [Term] id: GO:0021538 ! epithalamus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000172 ! epithalamus ! seconds spent parsing GO:0021538: 1.4 ! parsing: GO:0021539 ! No parse for: GO:0021539 subthalamus development ! parsing: GO:0021540 ! parse: GO:0021540 using "corpus callosum morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000188]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the corpus callosum are generated and organized. Morphogenesis pertains to the creation of form. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of corpus callosum [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000188])] [Term] id: GO:0021540 ! corpus callosum morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000188 ! corpus callosum ! seconds spent parsing GO:0021540: 1.65 ! parsing: GO:0021541 ! No parse for: GO:0021541 ammon gyrus development ! parsing: GO:0021542 ! parse: GO:0021542 using "dentate gyrus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000190]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of dentate gyrus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000190])] [Term] id: GO:0021542 ! dentate gyrus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000190 ! dentate gyrus ! seconds spent parsing GO:0021542: 2.24 ! parsing: GO:0021545 ! parse: GO:0021545 using "cranial nerve development" => cdef(GO:0021675, [OBO_REL:unfolds_in=MA:0000316]) [-2] ! parse: GO:0021545 using "cranial nerve development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000215]) [-2] ! parse: GO:0021545 using "cranial nerve development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000217, [OBO_REL:part_of=MA:0000316])]) [-3] ! parse: GO:0021545 using "cranial nerve development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000217]), [OBO_REL:unfolds_in=MA:0000316]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of cranial nerve [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000215])] [Term] id: GO:0021545 ! cranial nerve development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000215 ! cranial nerve ! seconds spent parsing GO:0021545: 6.47 ! parsing: GO:0021547 ! No parse for: GO:0021547 midbrain-hindbrain boundary initiation ! parsing: GO:0021549 ! parse: GO:0021549 using "cerebellum development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000198]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of cerebellum [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000198])] [Term] id: GO:0021549 ! cerebellum development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000198 ! cerebellum ! seconds spent parsing GO:0021549: 1.39 ! parsing: GO:0021550 ! parse: GO:0021550 using "medulla oblongata development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000206]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of medulla oblongata [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000206])] [Term] id: GO:0021550 ! medulla oblongata development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000206 ! medulla oblongata ! seconds spent parsing GO:0021550: 1.39 ! parsing: GO:0021551 ! parse: GO:0021551 using "central nervous system morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021551 using "central nervous system morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of the central nervous system is generated and organized. Morphogenesis pertains to the creation of form. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000167])] [Term] id: GO:0021551 ! central nervous system morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000167 ! central nervous system ! seconds spent parsing GO:0021551: 2.52 ! parsing: GO:0021552 ! No parse for: GO:0021552 midbrain-hindbrain boundary structural organization ! parsing: GO:0021553 ! No parse for: GO:0021553 olfactory nerve development ! parsing: GO:0021554 ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0021675, [OBO_REL:unfolds_in=MA:0000261]) [-2] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0021675, [OBO_REL:unfolds_in=XAO:0000179]) [-2] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000217, [OBO_REL:part_of=MA:0000261])]) [-3] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000217, [OBO_REL:part_of=XAO:0000179])]) [-3] ! parse: GO:0021554 using "optic nerve development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000217]), [OBO_REL:unfolds_in=MA:0000261]) [-4] ! parse: GO:0021554 using "optic nerve development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000217]), [OBO_REL:unfolds_in=XAO:0000179]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the optic nerve over time, from its formation to the mature structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain." ! PROPOSED: nerve development that OBO_REL:unfolds_in XAO:0000179 [cdef(GO:0021675, [OBO_REL:unfolds_in=XAO:0000179])] [Term] id: GO:0021554 ! optic nerve development intersection_of: GO:0021675 ! nerve development intersection_of: OBO_REL:unfolds_in XAO:0000179 ! seconds spent parsing GO:0021554: 19.33 ! parsing: GO:0021555 ! No parse for: GO:0021555 midbrain-hindbrain boundary morphogenesis ! parsing: GO:0021556 ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000167]) [-2] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000167]) [-2] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of central nervous system [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000167])] [Term] id: GO:0021556 ! central nervous system formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000167 ! central nervous system ! seconds spent parsing GO:0021556: 2.6 ! parsing: GO:0021557 ! No parse for: GO:0021557 oculomotor nerve development ! parsing: GO:0021558 ! No parse for: GO:0021558 trochlear nerve development ! parsing: GO:0021559 ! No parse for: GO:0021559 trigeminal nerve development ! parsing: GO:0021560 ! No parse for: GO:0021560 abducens nerve development ! parsing: GO:0021561 ! No parse for: GO:0021561 facial nerve development ! parsing: GO:0021562 ! No parse for: GO:0021562 vestibulocochlear nerve development ! parsing: GO:0021563 ! No parse for: GO:0021563 glossopharyngeal nerve development ! parsing: GO:0021564 ! No parse for: GO:0021564 vagus nerve development ! parsing: GO:0021565 ! No parse for: GO:0021565 accessory nerve development ! parsing: GO:0021566 ! No parse for: GO:0021566 hypoglossal nerve development ! parsing: GO:0021575 ! parse: GO:0021575 using "hindbrain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000195]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the hindbrain is generated and organized. Morphogenesis pertains to the creation of form. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hindbrain [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000195])] [Term] id: GO:0021575 ! hindbrain morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000195 ! hindbrain ! seconds spent parsing GO:0021575: 1.66 ! parsing: GO:0021576 ! parse: GO:0021576 using "hindbrain formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000195]) [-2] ! parse: GO:0021576 using "hindbrain formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000195]) [-2] ! no existing xp def ! def: "The process that gives rise to the hindbrain. This process pertains to the initial formation of a structure from unspecified parts. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of hindbrain [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000195])] [Term] id: GO:0021576 ! hindbrain formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000195 ! hindbrain ! seconds spent parsing GO:0021576: 1.68 ! parsing: GO:0021577 ! parse: GO:0021577 using "hindbrain structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000195]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the hindbrain. This process pertains to the physical shaping of a rudimentary structure. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of hindbrain [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000195])] [Term] id: GO:0021577 ! hindbrain structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000195 ! hindbrain ! seconds spent parsing GO:0021577: 2.26 ! parsing: GO:0021578 ! parse: GO:0021578 using "hindbrain maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000195]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the hindbrain to attain its fully functional state. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of hindbrain [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000195])] [Term] id: GO:0021578 ! hindbrain maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000195 ! hindbrain ! seconds spent parsing GO:0021578: 1.39 ! parsing: GO:0021579 ! parse: GO:0021579 using "medulla oblongata morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000206]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the medulla oblongata is generated and organized. Morphogenesis pertains to the creation of form. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of medulla oblongata [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000206])] [Term] id: GO:0021579 ! medulla oblongata morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000206 ! medulla oblongata ! seconds spent parsing GO:0021579: 1.64 ! parsing: GO:0021580 ! parse: GO:0021580 using "medulla oblongata formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000206]) [-2] ! parse: GO:0021580 using "medulla oblongata formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000206]) [-2] ! no existing xp def ! def: "The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of medulla oblongata [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000206])] [Term] id: GO:0021580 ! medulla oblongata formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000206 ! medulla oblongata ! seconds spent parsing GO:0021580: 1.69 ! parsing: GO:0021581 ! parse: GO:0021581 using "medulla oblongata structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000206]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the medulla oblongata. This process pertains to the physical shaping of a rudimentary structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of medulla oblongata [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000206])] [Term] id: GO:0021581 ! medulla oblongata structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000206 ! medulla oblongata ! seconds spent parsing GO:0021581: 1.95 ! parsing: GO:0021582 ! parse: GO:0021582 using "medulla oblongata maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000206]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the medulla oblongata to attain its fully functional state. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of medulla oblongata [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000206])] [Term] id: GO:0021582 ! medulla oblongata maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000206 ! medulla oblongata ! seconds spent parsing GO:0021582: 1.39 ! parsing: GO:0021587 ! parse: GO:0021587 using "cerebellum morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000198]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the cerebellum is generated and organized. Morphogenesis pertains to the creation of form. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cerebellum [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000198])] [Term] id: GO:0021587 ! cerebellum morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000198 ! cerebellum ! seconds spent parsing GO:0021587: 1.65 ! parsing: GO:0021588 ! parse: GO:0021588 using "cerebellum formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000198]) [-2] ! parse: GO:0021588 using "cerebellum formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000198]) [-2] ! no existing xp def ! def: "The process that gives rise to the cerebellum. This process pertains to the initial formation of a structure from unspecified parts. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cerebellum [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000198])] [Term] id: GO:0021588 ! cerebellum formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000198 ! cerebellum ! seconds spent parsing GO:0021588: 1.68 ! parsing: GO:0021589 ! parse: GO:0021589 using "cerebellum structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000198]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the cerebellum. This process pertains to the physical shaping of a rudimentary structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cerebellum [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000198])] [Term] id: GO:0021589 ! cerebellum structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000198 ! cerebellum ! seconds spent parsing GO:0021589: 1.95 ! parsing: GO:0021590 ! parse: GO:0021590 using "cerebellum maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000198]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellum to attain its fully functional state. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cerebellum [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000198])] [Term] id: GO:0021590 ! cerebellum maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000198 ! cerebellum ! seconds spent parsing GO:0021590: 1.39 ! parsing: GO:0021592 ! parse: GO:0021592 using "fourth ventricle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000196]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of fourth ventricle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000196])] [Term] id: GO:0021592 ! fourth ventricle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000196 ! fourth ventricle ! seconds spent parsing GO:0021592: 1.39 ! parsing: GO:0021597 ! parse: GO:0021597 using "central nervous system structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021597 using "central nervous system structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the central nervous system structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000167])] [Term] id: GO:0021597 ! central nervous system structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000167 ! central nervous system ! seconds spent parsing GO:0021597: 3.12 ! parsing: GO:0021602 ! parse: GO:0021602 using "cranial nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000215]) [-2] ! parse: GO:0021602 using "cranial nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=MA:0000316])]) [-3] ! parse: GO:0021602 using "cranial nerve morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000217]), [OBO_REL:unfolds_in=MA:0000316]) [-4] ! no existing xp def ! def: "The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000215])] [Term] id: GO:0021602 ! cranial nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000215 ! cranial nerve ! seconds spent parsing GO:0021602: 6.88 ! parsing: GO:0021603 ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000215]) [-2] ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=cdef(MA:0000217, [OBO_REL:part_of=MA:0000316])]) [-3] ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000215]) [-2] ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(MA:0000217, [OBO_REL:part_of=MA:0000316])]) [-3] ! parse: GO:0021603 using "cranial nerve formation" => cdef(cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000217]), [OBO_REL:unfolds_in=MA:0000316]) [-4] ! parse: GO:0021603 using "cranial nerve formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000217]), [OBO_REL:unfolds_in=MA:0000316]) [-4] ! no existing xp def ! def: "The process that gives rise to the cranial nerves. This process pertains to the initial formation of a structure from unspecified parts. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000215])] [Term] id: GO:0021603 ! cranial nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000215 ! cranial nerve ! seconds spent parsing GO:0021603: 7.0 ! parsing: GO:0021604 ! parse: GO:0021604 using "cranial nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000215]) [-2] ! parse: GO:0021604 using "cranial nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=MA:0000316])]) [-3] ! parse: GO:0021604 using "cranial nerve structural organization" => cdef(cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000217]), [OBO_REL:unfolds_in=MA:0000316]) [-4] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the cranial nerves. This process pertains to the physical shaping of a rudimentary structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000215])] [Term] id: GO:0021604 ! cranial nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000215 ! cranial nerve ! seconds spent parsing GO:0021604: 10.88 ! parsing: GO:0021605 ! parse: GO:0021605 using "cranial nerve maturation" => cdef(GO:0021682, [OBO_REL:unfolds_in=MA:0000316]) [-2] ! parse: GO:0021605 using "cranial nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000215]) [-2] ! parse: GO:0021605 using "cranial nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=MA:0000316])]) [-3] ! parse: GO:0021605 using "cranial nerve maturation" => cdef(cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000217]), [OBO_REL:unfolds_in=MA:0000316]) [-4] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a cranial nerve to attain its fully functional state. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000215])] [Term] id: GO:0021605 ! cranial nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000215 ! cranial nerve ! seconds spent parsing GO:0021605: 6.49 ! parsing: GO:0021626 ! parse: GO:0021626 using "central nervous system maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021626 using "central nervous system maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the central nervous system to attain its fully functional state. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000167])] [Term] id: GO:0021626 ! central nervous system maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000167 ! central nervous system ! seconds spent parsing GO:0021626: 2.02 ! parsing: GO:0021670 ! parse: GO:0021670 using "lateral ventricle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000192]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of lateral ventricle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000192])] [Term] id: GO:0021670 ! lateral ventricle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000192 ! lateral ventricle ! seconds spent parsing GO:0021670: 2.66 ! parsing: GO:0021675 ! parse: GO:0021675 using "nerve development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000217]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of nerve [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000217])] [Term] id: GO:0021675 ! nerve development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000217 ! nerve ! seconds spent parsing GO:0021675: 0.0 ! parsing: GO:0021678 ! parse: GO:0021678 using "third ventricle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000182]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of third ventricle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000182])] [Term] id: GO:0021678 ! third ventricle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000182 ! third ventricle ! seconds spent parsing GO:0021678: 1.39 ! parsing: GO:0021682 ! parse: GO:0021682 using "nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000217]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of nerve [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000217])] [Term] id: GO:0021682 ! nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000217 ! nerve ! seconds spent parsing GO:0021682: 0.01 ! parsing: GO:0021695 ! parse: GO:0021695 using "cerebellar cortex development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cerebellar cortex over time, from its formation to the mature structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of cerebellar cortex [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000199])] [Term] id: GO:0021695 ! cerebellar cortex development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021695: 1.39 ! parsing: GO:0021696 ! parse: GO:0021696 using "cerebellar cortex morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cerebellar cortex [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000199])] [Term] id: GO:0021696 ! cerebellar cortex morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021696: 1.65 ! parsing: GO:0021697 ! parse: GO:0021697 using "cerebellar cortex formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000199]) [-2] ! parse: GO:0021697 using "cerebellar cortex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process that gives rise to the cerebellar cortex. This process pertains to the initial formation of a structure from unspecified parts. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cerebellar cortex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000199])] [Term] id: GO:0021697 ! cerebellar cortex formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021697: 1.68 ! parsing: GO:0021698 ! parse: GO:0021698 using "cerebellar cortex structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the cerebellar cortex. This process pertains to the physical shaping of a rudimentary structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cerebellar cortex [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000199])] [Term] id: GO:0021698 ! cerebellar cortex structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021698: 1.94 ! parsing: GO:0021699 ! parse: GO:0021699 using "cerebellar cortex maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000199]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar cortex to attain its fully functional state. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cerebellar cortex [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000199])] [Term] id: GO:0021699 ! cerebellar cortex maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021699: 1.39 ! parsing: GO:0021703 ! parse: GO:0021703 using "locus coeruleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001017]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of locus coeruleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001017])] [Term] id: GO:0021703 ! locus ceruleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001017 ! locus coeruleus ! seconds spent parsing GO:0021703: 3.1 ! parsing: GO:0021713 ! No parse for: GO:0021713 inferior olivary nucleus development ! parsing: GO:0021714 ! No parse for: GO:0021714 inferior olivary nucleus morphogenesis ! parsing: GO:0021715 ! No parse for: GO:0021715 inferior olivary nucleus formation ! parsing: GO:0021716 ! No parse for: GO:0021716 inferior olivary nucleus structural organization ! parsing: GO:0021717 ! No parse for: GO:0021717 inferior olivary nucleus maturation ! parsing: GO:0021718 ! parse: GO:0021718 using "superior olivary nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of superior olivary nucleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001026])] [Term] id: GO:0021718 ! superior olivary nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021718: 1.75 ! parsing: GO:0021719 ! parse: GO:0021719 using "superior olivary nucleus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the superior olivary nucleus is generated and organized. Morphogenesis pertains to the creation of form. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of superior olivary nucleus [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001026])] [Term] id: GO:0021719 ! superior olivary nucleus morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021719: 2.01 ! parsing: GO:0021720 ! parse: GO:0021720 using "superior olivary nucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0001026]) [-2] ! parse: GO:0021720 using "superior olivary nucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of superior olivary nucleus [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001026])] [Term] id: GO:0021720 ! superior olivary nucleus formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021720: 2.05 ! parsing: GO:0021721 ! parse: GO:0021721 using "superior olivary nucleus structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the superior olivary nucleus structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of superior olivary nucleus [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0001026])] [Term] id: GO:0021721 ! superior olivary nucleus structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021721: 2.31 ! parsing: GO:0021722 ! parse: GO:0021722 using "superior olivary nucleus maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of superior olivary nucleus [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0001026])] [Term] id: GO:0021722 ! superior olivary nucleus maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021722: 1.76 ! parsing: GO:0021726 ! parse: GO:0021726 using "lateral reticular nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001047]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral reticular nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of lateral reticular nucleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001047])] [Term] id: GO:0021726 ! lateral reticular nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001047 ! lateral reticular nucleus ! seconds spent parsing GO:0021726: 2.61 ! parsing: GO:0021732 ! No parse for: GO:0021732 midbrain-hindbrain boundary maturation ! parsing: GO:0021735 ! parse: GO:0021735 using "dentate nucleus development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=GO:0005634]), [OBO_REL:has_quality=PATO:0001205]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the dentate nucleus over time, from its formation to the mature structure." ! PROPOSED: cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=GO:0005634]) that OBO_REL:has_quality dentate [cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=GO:0005634]), [OBO_REL:has_quality=PATO:0001205])] [Term] id: GO:0021735 ! dentate nucleus development intersection_of: _:cdef__GO_0032502_____OBO_REL_results_in_complete_development_of___GO_0005634___ intersection_of: OBO_REL:has_quality PATO:0001205 ! dentate synonym: "toothed nucleus development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021735: 2.31 ! parsing: GO:0021738 ! No parse for: GO:0021738 fastigial nucleus development ! parsing: GO:0021740 ! parse: GO:0021740 using "pontine nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001021]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pontine nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of pontine nucleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001021])] [Term] id: GO:0021740 ! pontine nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001021 ! pontine nucleus ! seconds spent parsing GO:0021740: 1.4 ! parsing: GO:0021741 ! No parse for: GO:0021741 spinal trigeminal nucleus development ! parsing: GO:0021745 ! parse: GO:0021745 using "nucleus ambiguus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001050]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the nucleus ambiguus over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of nucleus ambiguus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001050])] [Term] id: GO:0021745 ! nucleus ambiguus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001050 ! nucleus ambiguus ! seconds spent parsing GO:0021745: 2.01 ! parsing: GO:0021747 ! No parse for: GO:0021747 cochlear nucleus development ! parsing: GO:0021751 ! parse: GO:0021751 using "salivary nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(GO:0005634, [OBO_REL:part_of=MA:0002507])]) [-3] ! parse: GO:0021751 using "salivary nucleus development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=GO:0005634]), [OBO_REL:unfolds_in=MA:0002507]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the salivary nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of cdef(GO:0005634, [OBO_REL:part_of=MA:0002507]) [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(GO:0005634, [OBO_REL:part_of=MA:0002507])])] [Term] id: GO:0021751 ! salivary nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of _:cdef__GO_0005634_____OBO_REL_part_of___MA_0002507___ ! seconds spent parsing GO:0021751: 4.71 ! parsing: GO:0021756 ! parse: GO:0021756 using "striatum development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000891]) [-2] ! no existing xp def ! def: "The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of striatum [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000891])] [Term] id: GO:0021756 ! striatum development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000891 ! striatum ! seconds spent parsing GO:0021756: 1.39 ! parsing: GO:0021757 ! parse: GO:0021757 using "caudate nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000894]) [-2] ! parse: GO:0021757 using "caudate nucleus development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=GO:0005634]), [OBO_REL:has_quality=PATO:0001880]) [-4] ! no existing xp def ! def: "The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of caudate nucleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000894])] [Term] id: GO:0021757 ! caudate nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000894 ! caudate nucleus ! seconds spent parsing GO:0021757: 1.81 ! parsing: GO:0021758 ! parse: GO:0021758 using "putamen development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000895]) [-2] ! no existing xp def ! def: "The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of putamen [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000895])] [Term] id: GO:0021758 ! putamen development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000895 ! putamen ! seconds spent parsing GO:0021758: 1.39 ! parsing: GO:0021759 ! parse: GO:0021759 using "globus pallidus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000890]) [-2] ! parse: GO:0021759 using "pallidum development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000889]) [-2] ! no existing xp def ! def: "The progression of the globus pallidus over time from its initial formation until its mature state. The globus pallidus is one of the basal ganglia involved with control of voluntary movement in the brain." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of globus pallidus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000890])] [Term] id: GO:0021759 ! globus pallidus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000890 ! globus pallidus ! seconds spent parsing GO:0021759: 2.79 ! parsing: GO:0021761 ! No parse for: GO:0021761 limbic system development ! parsing: GO:0021762 ! parse: GO:0021762 using "substantia nigra development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000210]) [-2] ! no existing xp def ! def: "The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis)." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of substantia nigra [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000210])] [Term] id: GO:0021762 ! substantia nigra development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000210 ! substantia nigra ! seconds spent parsing GO:0021762: 1.4 ! parsing: GO:0021763 ! parse: GO:0021763 using "subthalamic nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000877]) [-2] ! no existing xp def ! def: "The progression of the subthalamic nucleus over time from its initial formation until its mature state. The subthalamic nucleus is the lens-shaped nucleus located in the ventral part of the subthalamus on the inner aspect of the internal capsule that is concerned with the integration of somatic motor function." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of subthalamic nucleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000877])] [Term] id: GO:0021763 ! subthalamic nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000877 ! subthalamic nucleus ! seconds spent parsing GO:0021763: 1.4 ! parsing: GO:0021764 ! parse: GO:0021764 using "amygdala development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000887]) [-2] ! no existing xp def ! def: "The progression of the amygdala over time from its initial formation until its mature state. The amygdala is an almond shaped set of neurons in the medial temporal lobe of the brain that play a key role in processing emotions such as fear and pleasure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of amygdala [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000887])] [Term] id: GO:0021764 ! amygdala development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000887 ! amygdala ! seconds spent parsing GO:0021764: 1.4 ! parsing: GO:0021766 ! parse: GO:0021766 using "hippocampus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000191]) [-2] ! no existing xp def ! def: "The progression of the hippocampus over time from its initial formation until its mature state." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of hippocampus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000191])] [Term] id: GO:0021766 ! hippocampus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000191 ! hippocampus ! seconds spent parsing GO:0021766: 1.4 ! parsing: GO:0021767 ! parse: GO:0021767 using "mammillary body development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000174]) [-2] ! no existing xp def ! def: "The progression of the mammilary body over time from its initial formation until its mature state. The mammilary body is a protrusion at the posterior end of the hypothalamus that contains hypothalamic nuclei." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of mammillary body [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000174])] [Term] id: GO:0021767 ! mammilary body development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000174 ! mammillary body ! seconds spent parsing GO:0021767: 2.25 ! parsing: GO:0021768 ! parse: GO:0021768 using "accumbens nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000892]) [-2] ! no existing xp def ! def: "The progression of the nucleus accumbens over time from its initial formation until its mature state. The nucleus accumbens is a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of accumbens nucleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000892])] [Term] id: GO:0021768 ! nucleus accumbens development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000892 ! accumbens nucleus ! seconds spent parsing GO:0021768: 2.87 ! parsing: GO:0021769 ! No parse for: GO:0021769 orbitofrontal cortex development ! parsing: GO:0021771 ! parse: GO:0021771 using "lateral geniculate nucleus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000869]) [-2] ! no existing xp def ! def: "The progression of the lateral geniculate nucleus over time from its initial formation until its mature state. The lateral geniculate nucleus is the primary processor of visual information received from the retina." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of lateral geniculate nucleus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000869])] [Term] id: GO:0021771 ! lateral geniculate nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000869 ! lateral geniculate nucleus ! seconds spent parsing GO:0021771: 3.48 ! parsing: GO:0021772 ! parse: GO:0021772 using "olfactory bulb development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000194]) [-2] ! no existing xp def ! def: "The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of olfactory bulb [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000194])] [Term] id: GO:0021772 ! olfactory bulb development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000194 ! olfactory bulb ! seconds spent parsing GO:0021772: 1.39 ! parsing: GO:0021794 ! parse: GO:0021794 using "thalamus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000179]) [-2] ! no existing xp def ! def: "The process by which the thalamus changes over time, from its initial formation to its mature state." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of thalamus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000179])] [Term] id: GO:0021794 ! thalamus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000179 ! thalamus ! seconds spent parsing GO:0021794: 1.39 ! parsing: GO:0021795 ! No parse for: GO:0021795 cerebral cortex cell migration ! parsing: GO:0021796 ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_specification_of=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000185]) [-2] ! no existing xp def ! def: "The regionalization process that results in the creation of areas within the cerebral cortex that will direct the behavior of cell migration and differentiation as the cortex develops." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in cerebral cortex [cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0000185])] [Term] id: GO:0021796 ! cerebral cortex regionalization intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in MA:0000185 ! cerebral cortex synonym: "pattern specification process in cerebral cortex" EXACT [OBOL:automatic] synonym: "pattern specification process in the cerebral cortex" EXACT [OBOL:automatic] synonym: "pattern specification process through the cerebral cortex" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021796: 6.81 ! parsing: GO:0021797 ! parse: GO:0021797 using "forebrain anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0021797 using "forebrain anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_specification_of=MA:0000170]) [-2] ! parse: GO:0021797 using "forebrain anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:unfolds_in=MA:0000170]) [-2] ! no existing xp def ! def: "The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain." ! PROPOSED: anterior/posterior pattern formation that OBO_REL:unfolds_in forebrain [cdef(GO:0009952, [OBO_REL:unfolds_in=MA:0000170])] [Term] id: GO:0021797 ! forebrain anterior/posterior pattern formation intersection_of: GO:0009952 ! anterior/posterior pattern formation intersection_of: OBO_REL:unfolds_in MA:0000170 ! forebrain synonym: "anterior/posterior pattern formation in forebrain" EXACT [OBOL:automatic] synonym: "anterior/posterior pattern formation in the forebrain" EXACT [OBOL:automatic] synonym: "anterior/posterior pattern formation through the forebrain" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021797: 4.91 ! parsing: GO:0021798 ! parse: GO:0021798 using "forebrain dorsal/ventral pattern formation" => cdef(GO:0009953, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0021798 using "forebrain dorsal/ventral pattern formation" => cdef(GO:0009953, [OBO_REL:results_in_specification_of=MA:0000170]) [-2] ! parse: GO:0021798 using "forebrain dorsal/ventral pattern formation" => cdef(GO:0009953, [OBO_REL:unfolds_in=MA:0000170]) [-2] ! no existing xp def ! def: "The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain." ! PROPOSED: dorsal/ventral pattern formation that OBO_REL:unfolds_in forebrain [cdef(GO:0009953, [OBO_REL:unfolds_in=MA:0000170])] [Term] id: GO:0021798 ! forebrain dorsal/ventral pattern formation intersection_of: GO:0009953 ! dorsal/ventral pattern formation intersection_of: OBO_REL:unfolds_in MA:0000170 ! forebrain synonym: "dorsal/ventral pattern formation in forebrain" EXACT [OBOL:automatic] synonym: "dorsal/ventral pattern formation in the forebrain" EXACT [OBOL:automatic] synonym: "dorsal/ventral pattern formation through the forebrain" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021798: 4.91 ! parsing: GO:0021799 ! No parse for: GO:0021799 cerebral cortex radially oriented cell migration ! parsing: GO:0021800 ! No parse for: GO:0021800 cerebral cortex tangential migration ! parsing: GO:0021801 ! No parse for: GO:0021801 cerebral cortex radial glia guided migration ! parsing: GO:0021819 ! No parse for: GO:0021819 layer formation in the cerebral cortex ! parsing: GO:0021823 ! No parse for: GO:0021823 cerebral cortex tangential migration using cell-cell interactions ! parsing: GO:0021824 ! No parse for: GO:0021824 cerebral cortex tangential migration using cell-axon interactions ! parsing: GO:0021828 ! No parse for: GO:0021828 gonadotrophin-releasing hormone neuronal migration to the hypothalamus ! parsing: GO:0021853 ! No parse for: GO:0021853 cerebral cortex GABAergic interneuron migration ! parsing: GO:0021854 ! parse: GO:0021854 using "hypothalamus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000173]) [-2] ! no existing xp def ! def: "The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of hypothalamus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000173])] [Term] id: GO:0021854 ! hypothalamus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000173 ! hypothalamus ! seconds spent parsing GO:0021854: 1.4 ! parsing: GO:0021855 ! No parse for: GO:0021855 hypothalamus cell migration ! parsing: GO:0021863 ! parse: GO:0021863 using "forebrain neuroblast differentiation" => cdef(GO:0014016, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! no existing xp def ! def: "The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of basal progenitor cells, neuroblasts that lose their contacts with the ventricular surface. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: neuroblast differentiation that OBO_REL:results_in_developmental_progression_of forebrain [cdef(GO:0014016, [OBO_REL:results_in_developmental_progression_of=MA:0000170])] [Term] id: GO:0021863 ! forebrain neuroblast differentiation intersection_of: GO:0014016 ! neuroblast differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000170 ! forebrain synonym: "neuroblast differentiation of a forebrain" EXACT [OBOL:automatic] synonym: "neuroblast differentiation of an forebrain" EXACT [OBOL:automatic] synonym: "neuroblast differentiation of the forebrain" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021863: 5.66 ! parsing: GO:0021869 ! No parse for: GO:0021869 forebrain ventricular zone progenitor cell division ! parsing: GO:0021871 ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_specification_of=MA:0000170]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000170]) [-2] ! no existing xp def ! def: "The regionalization process resulting in the creation of areas within the forebrain that will direct the behavior of cell migration in differentiation as the forebrain develops." ! PROPOSED: regionalization that OBO_REL:unfolds_in forebrain [cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000170])] [Term] id: GO:0021871 ! forebrain regionalization intersection_of: GO:0003002 ! regionalization intersection_of: OBO_REL:unfolds_in MA:0000170 ! forebrain synonym: "regionalization in forebrain" EXACT [OBOL:automatic] synonym: "regionalization in the forebrain" EXACT [OBOL:automatic] synonym: "regionalization through the forebrain" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021871: 1.72 ! parsing: GO:0021873 ! No parse for: GO:0021873 forebrain neuroblast division ! parsing: GO:0021877 ! No parse for: GO:0021877 forebrain neuron fate commitment ! parsing: GO:0021878 ! No parse for: GO:0021878 forebrain astrocyte fate commitment ! parsing: GO:0021879 ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of forebrain [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000170])] [Term] id: GO:0021879 ! forebrain neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000170 ! forebrain synonym: "neuron differentiation of a forebrain" EXACT [OBOL:automatic] synonym: "neuron differentiation of an forebrain" EXACT [OBOL:automatic] synonym: "neuron differentiation of the forebrain" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021879: 3.09 ! parsing: GO:0021884 ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000540, [OBO_REL:part_of=MA:0000170])]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000170]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell." ! PROPOSED: developmental process that OBO_REL:results_in_developmental_progression_of neuron and OBO_REL:unfolds_in forebrain [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000170])] [Term] id: GO:0021884 ! forebrain neuron development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_developmental_progression_of CL:0000540 ! neuron intersection_of: OBO_REL:unfolds_in MA:0000170 ! forebrain ! seconds spent parsing GO:0021884: 2.58 ! parsing: GO:0021885 ! No parse for: GO:0021885 forebrain cell migration ! parsing: GO:0021886 ! No parse for: GO:0021886 hypothalamus gonadotrophin-releasing hormone neuron differentiation ! parsing: GO:0021887 ! No parse for: GO:0021887 hypothalamus gonadotrophin-releasing hormone neuron fate commitment ! parsing: GO:0021888 ! No parse for: GO:0021888 hypothalamus gonadotrophin-releasing hormone neuron development ! parsing: GO:0021889 ! No parse for: GO:0021889 olfactory bulb interneuron differentiation ! parsing: GO:0021890 ! No parse for: GO:0021890 olfactory bulb interneuron fate commitment ! parsing: GO:0021891 ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000099, [OBO_REL:part_of=MA:0000194])]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000099, OBO_REL:unfolds_in=MA:0000194]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of an interneuron residing in the olfactory bulb, from its initial commitment, to the fully functional differentiated cell." ! PROPOSED: developmental process that OBO_REL:results_in_developmental_progression_of interneuron and OBO_REL:unfolds_in olfactory bulb [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000099, OBO_REL:unfolds_in=MA:0000194])] [Term] id: GO:0021891 ! olfactory bulb interneuron development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_developmental_progression_of CL:0000099 ! interneuron intersection_of: OBO_REL:unfolds_in MA:0000194 ! olfactory bulb ! seconds spent parsing GO:0021891: 1.99 ! parsing: GO:0021892 ! No parse for: GO:0021892 cerebral cortex GABAergic interneuron differentiation ! parsing: GO:0021893 ! No parse for: GO:0021893 cerebral cortex GABAergic interneuron fate commitment ! parsing: GO:0021894 ! No parse for: GO:0021894 cerebral cortex GABAergic interneuron development ! parsing: GO:0021895 ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000185]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of cerebral cortex [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000185])] [Term] id: GO:0021895 ! cerebral cortex neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000185 ! cerebral cortex synonym: "neuron differentiation of a cerebral cortex" EXACT [OBOL:automatic] synonym: "neuron differentiation of an cerebral cortex" EXACT [OBOL:automatic] synonym: "neuron differentiation of the cerebral cortex" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021895: 2.87 ! parsing: GO:0021896 ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0048708, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires the specialized features of an astrocyte residing in the forebrain. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function." ! PROPOSED: astrocyte differentiation that OBO_REL:results_in_developmental_progression_of forebrain [cdef(GO:0048708, [OBO_REL:results_in_developmental_progression_of=MA:0000170])] [Term] id: GO:0021896 ! forebrain astrocyte differentiation intersection_of: GO:0048708 ! astrocyte differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000170 ! forebrain synonym: "astrocyte differentiation of a forebrain" EXACT [OBOL:automatic] synonym: "astrocyte differentiation of an forebrain" EXACT [OBOL:automatic] synonym: "astrocyte differentiation of the forebrain" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021896: 3.04 ! parsing: GO:0021897 ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000127, [OBO_REL:part_of=MA:0000170])]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000127, OBO_REL:unfolds_in=MA:0000170]) [-3] ! no existing xp def ! def: "The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function." ! PROPOSED: developmental process that OBO_REL:results_in_developmental_progression_of astrocyte and OBO_REL:unfolds_in forebrain [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000127, OBO_REL:unfolds_in=MA:0000170])] [Term] id: GO:0021897 ! forebrain astrocyte development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_developmental_progression_of CL:0000127 ! astrocyte intersection_of: OBO_REL:unfolds_in MA:0000170 ! forebrain ! seconds spent parsing GO:0021897: 2.56 ! parsing: GO:0021905 ! No parse for: GO:0021905 forebrain-midbrain boundary formation ! parsing: GO:0021906 ! No parse for: GO:0021906 hindbrain-spinal cord boundary formation ! parsing: GO:0021919 ! No parse for: GO:0021919 BMP signaling pathway in spinal cord dorsal-ventral patterning ! parsing: GO:0021932 ! No parse for: GO:0021932 hindbrain radial glia guided cell migration ! parsing: GO:0021934 ! No parse for: GO:0021934 hindbrain tangential cell migration ! parsing: GO:0021949 ! No parse for: GO:0021949 brainstem precerebellar neuron precursor migration ! parsing: GO:0021952 ! parse: GO:0021952 using "central nervous system projection neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000598, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021952 using "central nervous system projection neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(cdef(CL:0000598, [OBO_REL:part_of=MA:0000016]), [OBO_REL:has_quality=BSPO:0000059])]) [-5] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of cdef(CL:0000598, [OBO_REL:part_of=MA:0000167]) [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000598, [OBO_REL:part_of=MA:0000167])])] [Term] id: GO:0021952 ! central nervous system projection neuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of _:cdef__CL_0000598_____OBO_REL_part_of___MA_0000167___ ! seconds spent parsing GO:0021952: 3.55 ! parsing: GO:0021953 ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000167])] [Term] id: GO:0021953 ! central nervous system neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000167 ! central nervous system ! seconds spent parsing GO:0021953: 4.96 ! parsing: GO:0021954 ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000540, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(cdef(CL:0000540, [OBO_REL:part_of=MA:0000016]), [OBO_REL:has_quality=BSPO:0000059])]) [-5] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron." ! PROPOSED: developmental process that OBO_REL:results_in_developmental_progression_of neuron and OBO_REL:unfolds_in central nervous system [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000167])] [Term] id: GO:0021954 ! central nervous system neuron development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_developmental_progression_of CL:0000540 ! neuron intersection_of: OBO_REL:unfolds_in MA:0000167 ! central nervous system ! seconds spent parsing GO:0021954: 4.12 ! parsing: GO:0021955 ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000540, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(cdef(CL:0000540, [OBO_REL:part_of=MA:0000016]), [OBO_REL:has_quality=BSPO:0000059])]) [-5] ! no existing xp def ! def: "Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of cdef(CL:0000540, [OBO_REL:part_of=MA:0000167]) [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000540, [OBO_REL:part_of=MA:0000167])])] [Term] id: GO:0021955 ! central nervous system neuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of _:cdef__CL_0000540_____OBO_REL_part_of___MA_0000167___ ! seconds spent parsing GO:0021955: 3.45 ! parsing: GO:0021956 ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000099, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(cdef(CL:0000099, [OBO_REL:part_of=MA:0000016]), [OBO_REL:has_quality=BSPO:0000059])]) [-5] ! no existing xp def ! def: "Generation of a long process that carries efferent (outgoing) action potentials from the cell body towards target cells from a neuron located in the central nervous system whose axons remain within a single brain region." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of cdef(CL:0000099, [OBO_REL:part_of=MA:0000167]) [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000099, [OBO_REL:part_of=MA:0000167])])] [Term] id: GO:0021956 ! central nervous system interneuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of _:cdef__CL_0000099_____OBO_REL_part_of___MA_0000167___ ! seconds spent parsing GO:0021956: 3.46 ! parsing: GO:0021958 ! No parse for: GO:0021958 gracilis tract morphogenesis ! parsing: GO:0021960 ! parse: GO:0021960 using "anterior commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002722]) [-2] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal processes is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anterior commissure [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002722])] [Term] id: GO:0021960 ! anterior commissure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0002722 ! anterior commissure ! seconds spent parsing GO:0021960: 2.89 ! parsing: GO:0021961 ! parse: GO:0021961 using "posterior commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002743]) [-2] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the midbrain towards target cells in the diencephalon." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of posterior commissure [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002743])] [Term] id: GO:0021961 ! posterior commissure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0002743 ! posterior commissure ! seconds spent parsing GO:0021961: 2.39 ! parsing: GO:0021965 ! No parse for: GO:0021965 spinal cord ventral commissure morphogenesis ! parsing: GO:0021978 ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=MA:0000183]) [-2] ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:results_in_specification_of=MA:0000183]) [-2] ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000183]) [-2] ! no existing xp def ! def: "The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops." ! PROPOSED: regionalization that OBO_REL:unfolds_in telencephalon [cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000183])] [Term] id: GO:0021978 ! telencephalon regionalization intersection_of: GO:0003002 ! regionalization intersection_of: OBO_REL:unfolds_in MA:0000183 ! telencephalon ! seconds spent parsing GO:0021978: 1.68 ! parsing: GO:0021979 ! No parse for: GO:0021979 hypothalamus cell differentiation ! parsing: GO:0021982 ! parse: GO:0021982 using "pineal gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000175]) [-2] ! no existing xp def ! def: "The progression of the pineal gland over time from its initial formation until its mature state. The pineal gland is an endocrine gland that secretes melatonin and is involved in circadian rhythms." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of pineal gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000175])] [Term] id: GO:0021982 ! pineal gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000175 ! pineal gland ! seconds spent parsing GO:0021982: 2.26 ! parsing: GO:0021983 ! parse: GO:0021983 using "pituitary gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000176]) [-2] ! no existing xp def ! def: "The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of pituitary gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000176])] [Term] id: GO:0021983 ! pituitary gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000176 ! pituitary gland ! seconds spent parsing GO:0021983: 1.4 ! parsing: GO:0021984 ! parse: GO:0021984 using "adenohypophysis development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000177]) [-2] ! parse: GO:0021984 using "anterior pituitary gland development" => cdef(GO:0021983, [OBO_REL:has_quality=PATO:0001632]) [-2] ! parse: GO:0021984 using "anterior pituitary gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000055])]) [-3] ! parse: GO:0021984 using "anterior pituitary gland development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001632]) [-4] ! no existing xp def ! def: "The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of adenohypophysis [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000177])] [Term] id: GO:0021984 ! adenohypophysis development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000177 ! adenohypophysis ! seconds spent parsing GO:0021984: 6.37 ! parsing: GO:0021985 ! parse: GO:0021985 using "neurohypophysis development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000178]) [-2] ! parse: GO:0021985 using "posterior pituitary gland development" => cdef(GO:0021983, [OBO_REL:has_quality=PATO:0001633]) [-2] ! parse: GO:0021985 using "posterior pituitary gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000056])]) [-3] ! parse: GO:0021985 using "posterior pituitary gland development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001633]) [-4] ! no existing xp def ! def: "The progression of the neurohypophysis over time from its initial formation until its mature state. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of neurohypophysis [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000178])] [Term] id: GO:0021985 ! neurohypophysis development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000178 ! neurohypophysis ! seconds spent parsing GO:0021985: 5.7 ! parsing: GO:0021986 ! parse: GO:0021986 using "habenula development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000830]) [-2] ! no existing xp def ! def: "The progression of the habenula over time from its initial formation until its mature state. The habenula is the group of nuclei that makes up the stalk of the pineal gland." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of habenula [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000830])] [Term] id: GO:0021986 ! habenula development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000830 ! habenula ! seconds spent parsing GO:0021986: 1.4 ! parsing: GO:0021987 ! parse: GO:0021987 using "cerebral cortex development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000185]) [-2] ! no existing xp def ! def: "The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of cerebral cortex [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000185])] [Term] id: GO:0021987 ! cerebral cortex development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000185 ! cerebral cortex ! seconds spent parsing GO:0021987: 1.41 ! parsing: GO:0021988 ! parse: GO:0021988 using "olfactory lobe development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002413]) [-2] ! no existing xp def ! def: "The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of olfactory lobe [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002413])] [Term] id: GO:0021988 ! olfactory lobe development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0002413 ! olfactory lobe ! seconds spent parsing GO:0021988: 1.4 ! parsing: GO:0021989 ! parse: GO:0021989 using "olfactory cortex development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000193]) [-2] ! no existing xp def ! def: "The progression of the olfactory cortex over time from its initial formation until its mature state. The olfactory cortex is involved in the perception of smell. It receives input from the olfactory bulb and is responsible for the identification of odors." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of olfactory cortex [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000193])] [Term] id: GO:0021989 ! olfactory cortex development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000193 ! olfactory cortex ! seconds spent parsing GO:0021989: 1.4 ! parsing: GO:0022000 ! No parse for: GO:0022000 forebrain induction by the anterior neural ridge ! parsing: GO:0022008 ! parse: GO:0022008 using "nervous system cell generation" => cdef(GO:0008150, [OBO_REL:results_in_formation_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000016])]) [-3] ! no existing xp def ! def: "Generation of cells within the nervous system." ! PROPOSED: biological_process that OBO_REL:results_in_formation_of cdef(CL:0000000, [OBO_REL:part_of=MA:0000016]) [cdef(GO:0008150, [OBO_REL:results_in_formation_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000016])])] [Term] id: GO:0022008 ! neurogenesis intersection_of: GO:0008150 ! biological_process intersection_of: OBO_REL:results_in_formation_of _:cdef__CL_0000000_____OBO_REL_part_of___MA_0000016___ ! seconds spent parsing GO:0022008: 7.29 ! parsing: GO:0022009 ! parse: GO:0022009 using "central nervous system vasculogenesis" => cdef(GO:0001570, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0022009 using "central nervous system vasculogenesis" => cdef(GO:0001570, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier." ! PROPOSED: vasculogenesis that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0001570, [OBO_REL:results_in_developmental_progression_of=MA:0000167])] [Term] id: GO:0022009 ! central nervous system vasculogenesis intersection_of: GO:0001570 ! vasculogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000167 ! central nervous system ! seconds spent parsing GO:0022009: 2.64 ! parsing: GO:0022010 ! parse: GO:0022010 using "myelination in the central nervous system" => cdef(GO:0042552, [OBO_REL:unfolds_in=MA:0000167]) [-2] ! parse: GO:0022010 using "myelination in the central nervous system" => cdef(GO:0042552, [OBO_REL:unfolds_in=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier." ! PROPOSED: myelination that OBO_REL:unfolds_in central nervous system [cdef(GO:0042552, [OBO_REL:unfolds_in=MA:0000167])] [Term] id: GO:0022010 ! myelination in the central nervous system intersection_of: GO:0042552 ! myelination intersection_of: OBO_REL:unfolds_in MA:0000167 ! central nervous system ! seconds spent parsing GO:0022010: 4.19 ! parsing: GO:0022011 ! parse: GO:0022011 using "myelination in the peripheral nervous system" => cdef(GO:0042552, [OBO_REL:unfolds_in=MA:0000218]) [-2] ! no existing xp def ! def: "The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier." ! PROPOSED: myelination that OBO_REL:unfolds_in peripheral nervous system [cdef(GO:0042552, [OBO_REL:unfolds_in=MA:0000218])] [Term] id: GO:0022011 ! myelination in the peripheral nervous system intersection_of: GO:0042552 ! myelination intersection_of: OBO_REL:unfolds_in MA:0000218 ! peripheral nervous system ! seconds spent parsing GO:0022011: 3.12 ! parsing: GO:0022026 ! No parse for: GO:0022026 epidermal growth factor signaling pathway involved in forebrain neuron fate commitment ! parsing: GO:0022029 ! No parse for: GO:0022029 telencephalon cell migration ! parsing: GO:0022030 ! No parse for: GO:0022030 telencephalon glial cell migration ! parsing: GO:0022031 ! No parse for: GO:0022031 telencephalon astrocyte cell migration ! parsing: GO:0022032 ! No parse for: GO:0022032 telencephalon oligodendrocyte cell migration ! parsing: GO:0022033 ! No parse for: GO:0022033 telencephalon microglial cell migration ! parsing: GO:0022037 ! parse: GO:0022037 using "metencephalon development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000197]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of metencephalon [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000197])] [Term] id: GO:0022037 ! metencephalon development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000197 ! metencephalon ! seconds spent parsing GO:0022037: 1.4 ! parsing: GO:0022038 ! parse: GO:0022038 using "corpus callosum development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000188]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of corpus callosum [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000188])] [Term] id: GO:0022038 ! corpus callosum development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000188 ! corpus callosum ! seconds spent parsing GO:0022038: 1.4 ! parsing: GO:0022600 ! parse: GO:0022600 using "digestive system process" => cdef(GO:0003008, [OBO_REL:part_of=GO:0007586]) [-2] ! no existing xp def ! def: "A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism." ! PROPOSED: system process that OBO_REL:part_of digestion [cdef(GO:0003008, [OBO_REL:part_of=GO:0007586])] [Term] id: GO:0022600 ! digestive system process intersection_of: GO:0003008 ! system process intersection_of: OBO_REL:part_of GO:0007586 ! digestion synonym: "digestant organ system process" EXACT [OBOL:automatic] synonym: "digestant system process" EXACT [OBOL:automatic] synonym: "digestants organ system process" EXACT [OBOL:automatic] synonym: "digestants system process" EXACT [OBOL:automatic] synonym: "digestion, organ system process" EXACT [OBOL:automatic] synonym: "digestion, system process" EXACT [OBOL:automatic] synonym: "digestive organ system process" EXACT [OBOL:automatic] def: "A organ system process that is part of a digestion" [OBOL:automatic] ! seconds spent parsing GO:0022600: 1.67 ! parsing: GO:0030049 ! No parse for: GO:0030049 muscle filament sliding ! parsing: GO:0030157 ! No parse for: GO:0030157 pancreatic juice secretion ! parsing: GO:0030240 ! No parse for: GO:0030240 muscle thin filament assembly ! parsing: GO:0030241 ! No parse for: GO:0030241 muscle thick filament assembly ! parsing: GO:0030282 ! No parse for: GO:0030282 bone mineralization ! parsing: GO:0030324 ! parse: GO:0030324 using "lung development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000415]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of lung [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000415])] [Term] id: GO:0030324 ! lung development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000415 ! lung ! seconds spent parsing GO:0030324: 1.4 ! parsing: GO:0030325 ! parse: GO:0030325 using "adrenal gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000116]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of adrenal gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000116])] [Term] id: GO:0030325 ! adrenal gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000116 ! adrenal gland ! seconds spent parsing GO:0030325: 1.4 ! parsing: GO:0030509 ! No parse for: GO:0030509 BMP signaling pathway ! parsing: GO:0030706 ! No parse for: GO:0030706 germarium-derived oocyte differentiation ! parsing: GO:0030707 ! parse: GO:0030707 using "ovarian follicle cell development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000477, [OBO_REL:part_of=MA:0000384])]) [-3] ! parse: GO:0030707 using "ovarian follicle cell development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=CL:0000477]), [OBO_REL:unfolds_in=MA:0000384]) [-4] ! no existing xp def ! def: "The process that occurs during oogenesis involving the ovarian follicle cells, somatic cells which surround the germ cells of an ovary." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of cdef(CL:0000477, [OBO_REL:part_of=MA:0000384]) [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000477, [OBO_REL:part_of=MA:0000384])])] [Term] id: GO:0030707 ! ovarian follicle cell development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of _:ovarian_follicle_cell_cell synonym: "ovarian follicle cell cell development" EXACT [OBOL:automatic] synonym: "ovarie follicle cell cell development" EXACT [OBOL:automatic] synonym: "ovarie follicle cell development" EXACT [OBOL:automatic] synonym: "ovaries follicle cell cell development" EXACT [OBOL:automatic] synonym: "ovaries follicle cell development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030707: 12.75 ! parsing: GO:0030713 ! No parse for: GO:0030713 ovarian follicle cell stalk formation ! parsing: GO:0030715 ! No parse for: GO:0030715 oocyte growth in germarium-derived egg chamber ! parsing: GO:0030720 ! parse: GO:0030720 using "oocyte localization during germarium-derived egg chamber formation" => cdef(cdef(GO:0051179, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:happens_during=GO:0007293]) [-4] ! parse: GO:0030720 using "oogenesis, oocyte localization" => cdef(cdef(GO:0051179, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:part_of=GO:0048477]) [-4] ! no existing xp def ! def: "Directed movement of the oocyte, following its specification, from its original central position in the cyst to a posterior position relative to the nurse cells of the egg chamber, and its maintenance in this posterior location. This is the first sign of anterior-posterior asymmetry in the developing egg chamber." ! PROPOSED: cdef(GO:0051179, [OBO_REL:results_in_localization_of=CL:0000023]) that OBO_REL:part_of oogenesis [cdef(cdef(GO:0051179, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:part_of=GO:0048477])] [Term] id: GO:0030720 ! oocyte localization during germarium-derived egg chamber formation intersection_of: _:cdef__GO_0051179_____OBO_REL_results_in_localization_of___CL_0000023___ intersection_of: OBO_REL:part_of GO:0048477 ! oogenesis synonym: "egg development, oocyte localization" EXACT [OBOL:automatic] synonym: "ovum cell development, oocyte localization" EXACT [OBOL:automatic] synonym: "ovum development, oocyte localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030720: 11.67 ! parsing: GO:0030723 ! parse: GO:0030723 using "ovarian fusome organisation and biogenesis" => cdef(GO:0045478, [OBO_REL:unfolds_in=MA:0000384]) [-2] ! parse: GO:0030723 using "ovarian fusome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0045169, [OBO_REL:part_of=MA:0000384])]) [-3] ! parse: GO:0030723 using "ovarian fusome organization and biogenesis" => cdef(GO:0045478, [OBO_REL:unfolds_in=MA:0000384]) [-2] ! parse: GO:0030723 using "ovarian fusome organization and biogenesis" => cdef(cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045169]), [OBO_REL:unfolds_in=MA:0000384]) [-4] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the fusome of ovarian cells, an organelle derived from the spectrosome. It anchors the mitotic spindle pole to provide orientation during cystoblast cell divisions." ! PROPOSED: fusome organization and biogenesis that OBO_REL:unfolds_in ovary [cdef(GO:0045478, [OBO_REL:unfolds_in=MA:0000384])] [Term] id: GO:0030723 ! ovarian fusome organization and biogenesis intersection_of: GO:0045478 ! fusome organization and biogenesis intersection_of: OBO_REL:unfolds_in MA:0000384 ! ovary synonym: "ovarie fusome organisation and biogenesis" EXACT [OBOL:automatic] synonym: "ovarie fusome organization and biogenesis" EXACT [OBOL:automatic] synonym: "ovaries fusome organisation and biogenesis" EXACT [OBOL:automatic] synonym: "ovaries fusome organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030723: 12.24 ! parsing: GO:0030724 ! No parse for: GO:0030724 testicular fusome organization and biogenesis ! parsing: GO:0030726 ! No parse for: GO:0030726 testicular ring canal formation ! parsing: GO:0030850 ! parse: GO:0030850 using "prostate gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000404]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of prostate gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000404])] [Term] id: GO:0030850 ! prostate gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000404 ! prostate gland ! seconds spent parsing GO:0030850: 2.27 ! parsing: GO:0030878 ! parse: GO:0030878 using "thyroid gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000129]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of thyroid gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000129])] [Term] id: GO:0030878 ! thyroid gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000129 ! thyroid gland ! seconds spent parsing GO:0030878: 1.41 ! parsing: GO:0030879 ! parse: GO:0030879 using "mammary gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000145]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of mammary gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000145])] [Term] id: GO:0030879 ! mammary gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000145 ! mammary gland ! seconds spent parsing GO:0030879: 1.41 ! parsing: GO:0030900 ! parse: GO:0030900 using "forebrain development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000170]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions)." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of forebrain [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000170])] [Term] id: GO:0030900 ! forebrain development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000170 ! forebrain ! seconds spent parsing GO:0030900: 2.27 ! parsing: GO:0030901 ! parse: GO:0030901 using "midbrain development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000207]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of midbrain [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000207])] [Term] id: GO:0030901 ! midbrain development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000207 ! midbrain ! seconds spent parsing GO:0030901: 2.27 ! parsing: GO:0030902 ! parse: GO:0030902 using "hindbrain development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000195]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium)." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of hindbrain [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000195])] [Term] id: GO:0030902 ! hindbrain development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000195 ! hindbrain ! seconds spent parsing GO:0030902: 2.27 ! parsing: GO:0030917 ! No parse for: GO:0030917 midbrain-hindbrain boundary development ! parsing: GO:0030965 ! No parse for: GO:0030965 plasma membrane electron transport, NADH to quinone ! parsing: GO:0031016 ! parse: GO:0031016 using "pancreas development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000120]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of pancreas [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000120])] [Term] id: GO:0031016 ! pancreas development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000120 ! pancreas ! seconds spent parsing GO:0031016: 1.41 ! parsing: GO:0031017 ! parse: GO:0031017 using "exocrine pancreas development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002415]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of exocrine pancreas [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002415])] [Term] id: GO:0031017 ! exocrine pancreas development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0002415 ! exocrine pancreas ! seconds spent parsing GO:0031017: 1.41 ! parsing: GO:0031018 ! parse: GO:0031018 using "endocrine pancreas development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001582]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of endocrine pancreas [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001582])] [Term] id: GO:0031018 ! endocrine pancreas development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001582 ! endocrine pancreas ! seconds spent parsing GO:0031018: 1.41 ! parsing: GO:0031069 ! parse: GO:0031069 using "hair follicle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000154]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hair follicle are generated and organized." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hair follicle [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000154])] [Term] id: GO:0031069 ! hair follicle morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000154 ! hair follicle ! seconds spent parsing GO:0031069: 1.67 ! parsing: GO:0031547 ! No parse for: GO:0031547 brain-derived neurotrophic factor receptor signaling pathway ! parsing: GO:0032274 ! No parse for: GO:0032274 gonadotropin secretion ! parsing: GO:0032455 ! No parse for: GO:0032455 nerve growth factor processing ! parsing: GO:0032601 ! No parse for: GO:0032601 connective tissue growth factor production ! parsing: GO:0032641 ! No parse for: GO:0032641 lymphotoxin A production ! parsing: GO:0032808 ! parse: GO:0032808 using "lacrimal gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001296]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lacrimal gland over time, from its formation to the mature structure. The lacrimal gland produces secretions that lubricate and protect the cornea of the eye." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of lacrimal gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001296])] [Term] id: GO:0032808 ! lacrimal gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001296 ! lacrimal gland ! seconds spent parsing GO:0032808: 1.44 ! parsing: GO:0032835 ! parse: GO:0032835 using "glomerulus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001657]) [-2] ! no existing xp def ! def: "The progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of glomerulus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0001657])] [Term] id: GO:0032835 ! glomerulus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0001657 ! glomerulus ! seconds spent parsing GO:0032835: 2.31 ! parsing: GO:0032902 ! No parse for: GO:0032902 nerve growth factor production ! parsing: GO:0033326 ! parse: GO:0033326 using "cerebrospinal fluid secretion" => cdef(GO:0046903, [OBO_REL:results_in_release_of=MA:0002503]) [-2] ! no existing xp def ! def: "The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces." ! PROPOSED: secretion that OBO_REL:results_in_release_of cerebrospinal fluid [cdef(GO:0046903, [OBO_REL:results_in_release_of=MA:0002503])] [Term] id: GO:0033326 ! cerebrospinal fluid secretion intersection_of: GO:0046903 ! secretion intersection_of: OBO_REL:results_in_release_of MA:0002503 ! cerebrospinal fluid ! seconds spent parsing GO:0033326: 2.67 ! parsing: GO:0033340 ! No parse for: GO:0033340 pelvic fin development ! parsing: GO:0033561 ! No parse for: GO:0033561 regulation of water loss via skin ! parsing: GO:0033598 ! No parse for: GO:0033598 mammary gland epithelial cell proliferation ! parsing: GO:0033616 ! parse: GO:0033616 using "plasma membrane proton-transporting ATP synthase complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045260]) [-2] ! parse: GO:0033616 using "plasma membrane proton-transporting ATP synthase complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0045259, [OBO_REL:part_of=GO:0005886])]) [-3] ! parse: GO:0033616 using "plasma membrane proton-transporting ATP synthase complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_formation_of=GO:0045260]) [-2] ! parse: GO:0033616 using "plasma membrane proton-transporting ATP synthase complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_formation_of=cdef(GO:0045259, [OBO_REL:part_of=GO:0005886])]) [-3] ! no existing xp def ! def: "The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the plasma membrane." ! PROPOSED: cellular component assembly that OBO_REL:results_in_formation_of plasma membrane proton-transporting ATP synthase complex [cdef(GO:0022607, [OBO_REL:results_in_formation_of=GO:0045260])] [Term] id: GO:0033616 ! plasma membrane proton-transporting ATP synthase complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_formation_of GO:0045260 ! plasma membrane proton-transporting ATP synthase complex synonym: "assembly of hydrogen-translocating F-type ATPase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "assembly of hydrogen-transporting ATP synthase" EXACT [OBOL:automatic] synonym: "assembly of plasma membrane hydrogen-translocating F-type ATPase complex" EXACT [OBOL:automatic] synonym: "assembly of proton-transporting ATP synthase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cell structure assembly of hydrogen-translocating F-type ATPase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cell structure assembly of hydrogen-transporting ATP synthase" EXACT [OBOL:automatic] synonym: "cell structure assembly of plasma membrane hydrogen-translocating F-type ATPase complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of proton-transporting ATP synthase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cellular component assembly of hydrogen-translocating F-type ATPase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cellular component assembly of hydrogen-transporting ATP synthase" EXACT [OBOL:automatic] synonym: "cellular component assembly of plasma membrane hydrogen-translocating F-type ATPase complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of proton-transporting ATP synthase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "complex assembly of hydrogen-translocating F-type ATPase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "complex assembly of hydrogen-transporting ATP synthase" EXACT [OBOL:automatic] synonym: "complex assembly of plasma membrane hydrogen-translocating F-type ATPase complex" EXACT [OBOL:automatic] synonym: "complex assembly of proton-transporting ATP synthase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "hydrogen-translocating F-type ATPase complex (sensu Bacteria) assembly" EXACT [OBOL:automatic] synonym: "hydrogen-translocating F-type ATPase complex (sensu Bacteria) cell structure assembly" EXACT [OBOL:automatic] synonym: "hydrogen-translocating F-type ATPase complex (sensu Bacteria) cellular component assembly" EXACT [OBOL:automatic] synonym: "hydrogen-translocating F-type ATPase complex (sensu Bacteria) complex assembly" EXACT [OBOL:automatic] synonym: "hydrogen-transporting ATP synthase assembly" EXACT [OBOL:automatic] synonym: "hydrogen-transporting ATP synthase cell structure assembly" EXACT [OBOL:automatic] synonym: "hydrogen-transporting ATP synthase cellular component assembly" EXACT [OBOL:automatic] synonym: "hydrogen-transporting ATP synthase complex assembly" EXACT [OBOL:automatic] synonym: "plasma membrane hydrogen-translocating F-type ATPase complex assembly" EXACT [OBOL:automatic] synonym: "plasma membrane hydrogen-translocating F-type ATPase complex cell structure assembly" EXACT [OBOL:automatic] synonym: "plasma membrane hydrogen-translocating F-type ATPase complex cellular component assembly" EXACT [OBOL:automatic] synonym: "plasma membrane hydrogen-translocating F-type ATPase complex complex assembly" EXACT [OBOL:automatic] synonym: "proton-transporting ATP synthase complex (sensu Bacteria) assembly" EXACT [OBOL:automatic] synonym: "proton-transporting ATP synthase complex (sensu Bacteria) cell structure assembly" EXACT [OBOL:automatic] synonym: "proton-transporting ATP synthase complex (sensu Bacteria) cellular component assembly" EXACT [OBOL:automatic] synonym: "proton-transporting ATP synthase complex (sensu Bacteria) complex assembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033616: 4.03 ! parsing: GO:0033618 ! parse: GO:0033618 using "plasma membrane cytochrome c oxidase complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0045277, [OBO_REL:part_of=GO:0005886])]) [-3] ! parse: GO:0033618 using "plasma membrane cytochrome c oxidase complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_formation_of=cdef(GO:0045277, [OBO_REL:part_of=GO:0005886])]) [-3] ! parse: GO:0033618 using "plasma membrane respiratory chain complex IV assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045278]) [-2] ! parse: GO:0033618 using "plasma membrane respiratory chain complex IV assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0045277, [OBO_REL:part_of=GO:0005886])]) [-3] ! parse: GO:0033618 using "plasma membrane respiratory chain complex IV assembly" => cdef(GO:0022607, [OBO_REL:results_in_formation_of=GO:0045278]) [-2] ! parse: GO:0033618 using "plasma membrane respiratory chain complex IV assembly" => cdef(GO:0022607, [OBO_REL:results_in_formation_of=cdef(GO:0045277, [OBO_REL:part_of=GO:0005886])]) [-3] ! no existing xp def ! def: "The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase) in the plasma membrane." ! PROPOSED: cellular component assembly that OBO_REL:results_in_formation_of plasma membrane respiratory chain complex IV [cdef(GO:0022607, [OBO_REL:results_in_formation_of=GO:0045278])] [Term] id: GO:0033618 ! plasma membrane respiratory chain complex IV assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_formation_of GO:0045278 ! plasma membrane respiratory chain complex IV synonym: "assembly of cytochrome c oxidase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "assembly of respiratory chain complex IV (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome c oxidase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cell structure assembly of respiratory chain complex IV (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome c oxidase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cellular component assembly of respiratory chain complex IV (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome c oxidase complex (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "complex assembly of respiratory chain complex IV (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex (sensu Bacteria) assembly" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex (sensu Bacteria) cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex (sensu Bacteria) cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex (sensu Bacteria) complex assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV (sensu Bacteria) assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV (sensu Bacteria) cell structure assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV (sensu Bacteria) cellular component assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV (sensu Bacteria) complex assembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033618: 7.64 ! parsing: GO:0034369 ! parse: GO:0034369 using "plasma lipoprotein particle remodeling" => cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=GO:0034358]) [-2] ! no existing xp def ! def: "The acquisition, loss or modification of a protein or lipid within a plasma lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the esterification of cholesterol by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT)." ! PROPOSED: developmental process that OBO_REL:results_in_remodeling_of plasma lipoprotein particle [cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=GO:0034358])] [Term] id: GO:0034369 ! plasma lipoprotein particle remodeling intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_remodeling_of GO:0034358 ! plasma lipoprotein particle ! seconds spent parsing GO:0034369: 2.04 ! parsing: GO:0034377 ! parse: GO:0034377 using "plasma lipoprotein particle assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0034358]) [-2] ! parse: GO:0034377 using "plasma lipoprotein particle assembly" => cdef(GO:0022607, [OBO_REL:results_in_formation_of=GO:0034358]) [-2] ! no existing xp def ! def: "The aggregation and arrangement of proteins and lipids to form a plasma lipoprotein particle." ! PROPOSED: cellular component assembly that OBO_REL:results_in_formation_of plasma lipoprotein particle [cdef(GO:0022607, [OBO_REL:results_in_formation_of=GO:0034358])] [Term] id: GO:0034377 ! plasma lipoprotein particle assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_formation_of GO:0034358 ! plasma lipoprotein particle ! seconds spent parsing GO:0034377: 2.07 ! parsing: GO:0035002 ! No parse for: GO:0035002 liquid clearance, open tracheal system ! parsing: GO:0035017 ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0002704]) [-2] ! no existing xp def ! def: "The regionalization process that gives rise to the patterns of cell differentiation in the cuticle." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in cuticle [cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0002704])] [Term] id: GO:0035017 ! cuticle pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in MA:0002704 ! cuticle ! seconds spent parsing GO:0035017: 1.73 ! parsing: GO:0035037 ! No parse for: GO:0035037 sperm entry ! parsing: GO:0035040 ! No parse for: GO:0035040 sperm nuclear envelope removal ! parsing: GO:0035041 ! No parse for: GO:0035041 sperm chromatin decondensation ! parsing: GO:0035042 ! No parse for: GO:0035042 fertilization, exchange of chromosomal proteins ! parsing: GO:0035044 ! No parse for: GO:0035044 sperm aster formation ! parsing: GO:0035045 ! No parse for: GO:0035045 sperm plasma membrane disassembly ! parsing: GO:0035051 ! No parse for: GO:0035051 cardiac cell differentiation ! parsing: GO:0035053 ! No parse for: GO:0035053 dorsal vessel heart proper cell fate commitment ! parsing: GO:0035070 ! parse: GO:0035070 using "salivary gland histolysis" => cdef(GO:0007559, [OBO_REL:results_in_developmental_progression_of=MA:0000346]) [-2] ! no existing xp def ! def: "The stage-specific break down of the larval salivary glands during Drosophila metamorphosis, to allow replacement of larval structures by tissues and structures that form the adult fly." ! PROPOSED: histolysis that OBO_REL:results_in_developmental_progression_of salivary gland [cdef(GO:0007559, [OBO_REL:results_in_developmental_progression_of=MA:0000346])] [Term] id: GO:0035070 ! salivary gland histolysis intersection_of: GO:0007559 ! histolysis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000346 ! salivary gland ! seconds spent parsing GO:0035070: 5.62 ! parsing: GO:0035071 ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000346])]) [-3] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=MA:0000346]) [-2] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000346])]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000346])]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000346])]), [OBO_REL:mediated_by=GO:0006914]) [-5] ! no existing xp def ! def: "The stage-specific programmed cell death of salivary gland cells during salivary gland histolysis." ! PROPOSED: cell death that OBO_REL:results_in_developmental_progression_of salivary gland [cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=MA:0000346])] [Term] id: GO:0035071 ! salivary gland cell autophagic cell death intersection_of: GO:0008219 ! cell death intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000346 ! salivary gland ! seconds spent parsing GO:0035071: 38.23 ! parsing: GO:0035074 ! No parse for: GO:0035074 pupation ! parsing: GO:0035092 ! No parse for: GO:0035092 sperm chromatin condensation ! parsing: GO:0035093 ! No parse for: GO:0035093 spermatogenesis, exchange of chromosomal proteins ! parsing: GO:0035108 ! parse: GO:0035108 using "limb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000007]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of limb [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000007])] [Term] id: GO:0035108 ! limb morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000007 ! limb ! seconds spent parsing GO:0035108: 1.66 ! parsing: GO:0035109 ! No parse for: GO:0035109 imaginal disc-derived limb morphogenesis ! parsing: GO:0035121 ! parse: GO:0035121 using "tail morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000008]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of tail [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000008])] [Term] id: GO:0035121 ! tail morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000008 ! tail ! seconds spent parsing GO:0035121: 1.67 ! parsing: GO:0035136 ! parse: GO:0035136 using "forelimb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000025]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of forelimb [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000025])] [Term] id: GO:0035136 ! forelimb morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000025 ! forelimb ! seconds spent parsing GO:0035136: 1.68 ! parsing: GO:0035137 ! parse: GO:0035137 using "hindlimb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000026]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hindlimb [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000026])] [Term] id: GO:0035137 ! hindlimb morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000026 ! hindlimb ! seconds spent parsing GO:0035137: 1.67 ! parsing: GO:0035139 ! No parse for: GO:0035139 pelvic fin morphogenesis ! parsing: GO:0035147 ! No parse for: GO:0035147 branch fusion, open tracheal system ! parsing: GO:0035149 ! parse: GO:0035149 using "tracheal lumen formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=cdef(GO:0044464, [OBO_REL:surrounded_by=MA:0000441])]) [-3] ! parse: GO:0035149 using "tracheal lumen formation" => cdef(GO:0035148, [OBO_REL:unfolds_in=MA:0000441]) [-2] ! parse: GO:0035149 using "tracheal lumen formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(GO:0044464, [OBO_REL:surrounded_by=MA:0000441])]) [-3] ! no existing xp def ! def: "Creation of the central hole of a tube in an open tracheal system through which gases flow." ! PROPOSED: lumen formation that OBO_REL:unfolds_in trachea [cdef(GO:0035148, [OBO_REL:unfolds_in=MA:0000441])] [Term] id: GO:0035149 ! lumen formation, open tracheal system intersection_of: GO:0035148 ! lumen formation intersection_of: OBO_REL:unfolds_in MA:0000441 ! trachea synonym: "tracheal lumen formation in an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035149: 7.0 ! parsing: GO:0035153 ! No parse for: GO:0035153 epithelial cell type specification, open tracheal system ! parsing: GO:0035158 ! No parse for: GO:0035158 regulation of tube diameter, open tracheal system ! parsing: GO:0035159 ! No parse for: GO:0035159 regulation of tube length, open tracheal system ! parsing: GO:0035167 ! No parse for: GO:0035167 larval lymph gland hemopoiesis ! parsing: GO:0035193 ! parse: GO:0035193 using "central nervous system metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0035193 using "central nervous system metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! parse: GO:0035193 using "larval central nervous system remodeling" => cdef(cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=MA:0000167]), [OBO_REL:has_quality=PATO:0001185]) [-4] ! parse: GO:0035193 using "larval central nervous system remodeling" => cdef(cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]), [OBO_REL:has_quality=PATO:0001185]) [-5] ! no existing xp def ! def: "Reorganization of the pre-existing, functional larval central nervous system into one that can serve the novel behavioral needs of the adult." ! PROPOSED: metamorphosis that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=MA:0000167])] [Term] id: GO:0035193 ! larval central nervous system remodeling intersection_of: GO:0007552 ! metamorphosis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000167 ! central nervous system synonym: "metamorphosis of a central nervous system" EXACT [OBOL:automatic] synonym: "metamorphosis of an central nervous system" EXACT [OBOL:automatic] synonym: "metamorphosis of the central nervous system" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035193: 11.02 ! parsing: GO:0035202 ! No parse for: GO:0035202 sac formation, open tracheal system ! parsing: GO:0035211 ! No parse for: GO:0035211 spermathecum morphogenesis ! parsing: GO:0035214 ! No parse for: GO:0035214 eye-antennal disc development ! parsing: GO:0035262 ! parse: GO:0035262 using "gonad morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002420]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of gonad [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002420])] [Term] id: GO:0035262 ! gonad morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0002420 ! gonad synonym: "anatomical structure morphogenesis of a gonad" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of an gonad" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of the gonad" EXACT [OBOL:automatic] synonym: "gonad anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "morphogenesis of a gonad" EXACT [OBOL:automatic] synonym: "morphogenesis of an gonad" EXACT [OBOL:automatic] synonym: "morphogenesis of the gonad" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035262: 1.68 ! parsing: GO:0035264 ! No parse for: GO:0035264 multicellular organism growth ! parsing: GO:0035270 ! parse: GO:0035270 using "endocrine system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000012]) [-2] ! no existing xp def ! def: "Progression of the endocrine system over time, from its formation to a mature structure. The endocrine system is a system of hormones and ductless glands, where the glands release hormones directly into the blood, lymph or other intercellular fluid, and the hormones circulate within the body to affect distant organs. The major glands that make up the human endocrine system are the hypothalamus, pituitary, thyroid, parathryoids, adrenals, pineal body, and the reproductive glands which include the ovaries and testes." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of endocrine system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000012])] [Term] id: GO:0035270 ! endocrine system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000012 ! endocrine system ! seconds spent parsing GO:0035270: 1.42 ! parsing: GO:0035272 ! parse: GO:0035272 using "exocrine system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002411]) [-2] ! no existing xp def ! def: "Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of exocrine system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002411])] [Term] id: GO:0035272 ! exocrine system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0002411 ! exocrine system ! seconds spent parsing GO:0035272: 1.41 ! parsing: GO:0035283 ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_specification_of=MA:0000167]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_specification_of=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000167]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=cdef(MA:0000016, [OBO_REL:has_quality=BSPO:0000059])]) [-3] ! no existing xp def ! def: "Division of the central nervous system into a series of semi-repetitive parts or segments." ! PROPOSED: segmentation that OBO_REL:unfolds_in central nervous system [cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000167])] [Term] id: GO:0035283 ! central nervous system segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in MA:0000167 ! central nervous system synonym: "segmentation in central nervous system" EXACT [OBOL:automatic] synonym: "segmentation in the central nervous system" EXACT [OBOL:automatic] synonym: "segmentation through the central nervous system" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035283: 2.7 ! parsing: GO:0035284 ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000168]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_specification_of=MA:0000168]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000168]) [-2] ! no existing xp def ! def: "Division of the brain into a series of semi-repetitive parts or segments." ! PROPOSED: segmentation that OBO_REL:unfolds_in brain [cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000168])] [Term] id: GO:0035284 ! brain segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in MA:0000168 ! brain ! seconds spent parsing GO:0035284: 1.69 ! parsing: GO:0035287 ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000023]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_specification_of=MA:0000023]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000023]) [-2] ! no existing xp def ! def: "Partitioning the head anlage into a fixed number of segmental units. The number of segments composing the insect head has long been a subject of debate, but it is generally agreed that there are 6 or 7 segments. From anterior to posterior the head segments are the procephalic segments (labral, (ocular), antennal and intercalary) and the gnathal segments (mandibular, maxillary and labial)." ! PROPOSED: segmentation that OBO_REL:unfolds_in head [cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000023])] [Term] id: GO:0035287 ! head segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in MA:0000023 ! head synonym: "segmentation in head" EXACT [OBOL:automatic] synonym: "segmentation in the head" EXACT [OBOL:automatic] synonym: "segmentation through the head" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035287: 1.69 ! parsing: GO:0035290 ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000004]) [-2] ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:results_in_specification_of=MA:0000004]) [-2] ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000004]) [-2] ! no existing xp def ! def: "Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8." ! PROPOSED: segmentation that OBO_REL:unfolds_in trunk [cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000004])] [Term] id: GO:0035290 ! trunk segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in MA:0000004 ! trunk synonym: "segmentation in the trunk" EXACT [OBOL:automatic] synonym: "segmentation in trunk" EXACT [OBOL:automatic] synonym: "segmentation through the trunk" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035290: 1.7 ! parsing: GO:0040002 ! No parse for: GO:0040002 collagen and cuticulin-based cuticle development ! parsing: GO:0040003 ! No parse for: GO:0040003 chitin-based cuticle development ! parsing: GO:0040025 ! No parse for: GO:0040025 vulval development ! parsing: GO:0042051 ! No parse for: GO:0042051 compound eye photoreceptor development ! parsing: GO:0042070 ! parse: GO:0042070 using "oocyte axis determination, oocyte nucleus anchoring" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:part_of=GO:0007309]) [-5] ! parse: GO:0042070 using "oocyte axis determination, oocyte nucleus anchoring" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023])]) [-6] ! parse: GO:0042070 using "oocyte axis determination, oocyte nucleus anchoring" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_specification_of=CL:0000023])]) [-6] ! parse: GO:0042070 using "oocyte axis determination, oocyte nucleus anchoring" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023])]) [-6] ! parse: GO:0042070 using "oocyte nucleus anchoring during oocyte axis determination" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:happens_during=GO:0007309]) [-5] ! parse: GO:0042070 using "oocyte nucleus anchoring during oocyte axis determination" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:happens_during=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023])]) [-6] ! parse: GO:0042070 using "oocyte nucleus anchoring during oocyte axis determination" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:happens_during=cdef(GO:0009798, [OBO_REL:results_in_specification_of=CL:0000023])]) [-6] ! parse: GO:0042070 using "oocyte nucleus anchoring during oocyte axis determination" => cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:happens_during=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023])]) [-6] ! no existing xp def ! def: "Maintenance of the oocyte nucleus in a particular position within the cell during the establishment and maintenance of the axes of the oocyte." ! PROPOSED: cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]) that OBO_REL:part_of oocyte axis determination [cdef(cdef(GO:0008150, [OBO_REL:results_in_connection_of=CL:0000023, OBO_REL:results_in_connection_of=GO:0005634]), [OBO_REL:part_of=GO:0007309])] [Term] id: GO:0042070 ! maintenance of oocyte nucleus localization during oocyte axis determination intersection_of: _:oocyte_nucleus_anchoring intersection_of: OBO_REL:part_of GO:0007309 ! oocyte axis determination def: "A biological process by which a oocyte and a nucleus become attached during oocyte axis determination" [OBOL:automatic] ! seconds spent parsing GO:0042070: 41.88 ! parsing: GO:0042109 ! No parse for: GO:0042109 lymphotoxin A biosynthetic process ! parsing: GO:0042335 ! parse: GO:0042335 using "cuticle anabolism" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle biosynthetic process" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle synthesis" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of a cuticle, the outer layer of some animals and plants, which acts to prevent water loss." ! PROPOSED: biosynthetic process that OBO_REL:results_in_formation_of cuticle [cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0002704])] [Term] id: GO:0042335 ! cuticle development intersection_of: GO:0009058 ! biosynthetic process intersection_of: OBO_REL:results_in_formation_of MA:0002704 ! cuticle ! seconds spent parsing GO:0042335: 10.12 ! parsing: GO:0042336 ! No parse for: GO:0042336 protein-based cuticle development during molting ! parsing: GO:0042337 ! No parse for: GO:0042337 chitin-based cuticle development during molting ! parsing: GO:0042338 ! No parse for: GO:0042338 collagen and cuticulin-based cuticle development during molting ! parsing: GO:0042441 ! No parse for: GO:0042441 eye pigment metabolic process ! parsing: GO:0042472 ! parse: GO:0042472 using "inner ear morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000237]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of inner ear [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000237])] [Term] id: GO:0042472 ! inner ear morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000237 ! inner ear ! seconds spent parsing GO:0042472: 1.69 ! parsing: GO:0042473 ! parse: GO:0042473 using "outer ear morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000258]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of outer ear [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000258])] [Term] id: GO:0042473 ! outer ear morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000258 ! outer ear ! seconds spent parsing GO:0042473: 1.68 ! parsing: GO:0042474 ! parse: GO:0042474 using "middle ear morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000253]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of middle ear [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000253])] [Term] id: GO:0042474 ! middle ear morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000253 ! middle ear ! seconds spent parsing GO:0042474: 1.69 ! parsing: GO:0042475 ! No parse for: GO:0042475 odontogenesis of dentine-containing teeth ! parsing: GO:0042476 ! parse: GO:0042476 using "tooth development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000348]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s)." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of tooth [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000348])] [Term] id: GO:0042476 ! odontogenesis intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000348 ! tooth ! seconds spent parsing GO:0042476: 4.05 ! parsing: GO:0042477 ! No parse for: GO:0042477 odontogenesis of calcareous or chitinous tooth ! parsing: GO:0042702 ! No parse for: GO:0042702 uterine wall growth ! parsing: GO:0042704 ! No parse for: GO:0042704 uterine wall breakdown ! parsing: GO:0042713 ! No parse for: GO:0042713 sperm ejaculation ! parsing: GO:0042774 ! No parse for: GO:0042774 plasma membrane ATP synthesis coupled electron transport ! parsing: GO:0042777 ! parse: GO:0042777 using "plasma membrane ATP synthesis coupled proton transport" => cdef(GO:0015986, [OBO_REL:results_in_formation_of=GO:0005886]) [-2] ! parse: GO:0042777 using "plasma membrane ATP synthesis coupled proton transport" => cdef(GO:0015986, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! no existing xp def ! def: "The transport of protons across the plasma membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis." ! PROPOSED: ATP synthesis coupled proton transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0015986, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0042777 ! plasma membrane ATP synthesis coupled proton transport intersection_of: GO:0015986 ! ATP synthesis coupled proton transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane ATP synthesis coupled proton transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane ATP synthesis coupled proton transport" EXACT [OBOL:automatic] synonym: "plasmalemma ATP synthesis coupled proton transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042777: 5.47 ! parsing: GO:0043010 ! parse: GO:0043010 using "camera-type eye development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000261]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of eye [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000261])] [Term] id: GO:0043010 ! camera-type eye development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000261 ! eye synonym: "eye development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043010: 10.47 ! parsing: GO:0043050 ! No parse for: GO:0043050 pharyngeal pumping ! parsing: GO:0043057 ! No parse for: GO:0043057 backward locomotion ! parsing: GO:0043084 ! No parse for: GO:0043084 penile erection ! parsing: GO:0043133 ! parse: GO:0043133 using "hindgut contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001527]) [-2] ! no existing xp def ! def: "A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to hindgut [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0001527])] [Term] id: GO:0043133 ! hindgut contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0001527 ! hindgut ! seconds spent parsing GO:0043133: 1.42 ! parsing: GO:0043282 ! parse: GO:0043282 using "pharyngeal muscle development" => cdef(GO:0007517, [OBO_REL:unfolds_in=MA:0000432]) [-2] ! parse: GO:0043282 using "pharyngeal muscle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000015, [OBO_REL:part_of=MA:0000432])]) [-3] ! parse: GO:0043282 using "pharyngeal muscle development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000015]), [OBO_REL:unfolds_in=MA:0000432]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pharyngeal muscle over time, from its formation to the mature structure. The pharyngeal muscle mediates feeding in nematodes." ! PROPOSED: muscle development that OBO_REL:unfolds_in pharynx [cdef(GO:0007517, [OBO_REL:unfolds_in=MA:0000432])] [Term] id: GO:0043282 ! pharyngeal muscle development intersection_of: GO:0007517 ! muscle development intersection_of: OBO_REL:unfolds_in MA:0000432 ! pharynx ! seconds spent parsing GO:0043282: 4.59 ! parsing: GO:0043403 ! parse: GO:0043403 using "skeletal muscle regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=MA:0000165]) [-2] ! no existing xp def ! def: "The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage." ! PROPOSED: regeneration that OBO_REL:results_in_developmental_progression_of skeletal muscle [cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=MA:0000165])] [Term] id: GO:0043403 ! skeletal muscle regeneration intersection_of: GO:0031099 ! regeneration intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0043403: 4.17 ! parsing: GO:0043500 ! No parse for: GO:0043500 muscle adaptation ! parsing: GO:0043501 ! No parse for: GO:0043501 skeletal muscle adaptation ! parsing: GO:0043503 ! No parse for: GO:0043503 skeletal muscle fiber adaptation ! parsing: GO:0043584 ! parse: GO:0043584 using "nose development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000281]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of nose [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000281])] [Term] id: GO:0043584 ! nose development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000281 ! nose ! seconds spent parsing GO:0043584: 2.3 ! parsing: GO:0043585 ! parse: GO:0043585 using "nose morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000281]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the nose are generated and organized. Morphogenesis pertains to the creation of form. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of nose [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000281])] [Term] id: GO:0043585 ! nose morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000281 ! nose ! seconds spent parsing GO:0043585: 2.55 ! parsing: GO:0043586 ! parse: GO:0043586 using "tongue development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000347]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of tongue [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000347])] [Term] id: GO:0043586 ! tongue development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000347 ! tongue ! seconds spent parsing GO:0043586: 1.43 ! parsing: GO:0043587 ! parse: GO:0043587 using "tongue morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000347]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the tongue are generated and organized. Morphogenesis pertains to the creation of form. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of tongue [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000347])] [Term] id: GO:0043587 ! tongue morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000347 ! tongue ! seconds spent parsing GO:0043587: 2.56 ! parsing: GO:0043588 ! parse: GO:0043588 using "skin development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000151]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of skin [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000151])] [Term] id: GO:0043588 ! skin development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000151 ! skin ! seconds spent parsing GO:0043588: 2.3 ! parsing: GO:0043589 ! parse: GO:0043589 using "skin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000151]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the skin are generated and organized. Morphogenesis pertains to the creation of form. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of skin [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000151])] [Term] id: GO:0043589 ! skin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000151 ! skin ! seconds spent parsing GO:0043589: 1.68 ! parsing: GO:0044239 ! parse: GO:0044239 using "salivary polysaccharide breakdown" => cdef(GO:0000272, [OBO_REL:unfolds_in=MA:0002507]) [-2] ! parse: GO:0044239 using "salivary polysaccharide catabolic process" => cdef(GO:0000272, [OBO_REL:unfolds_in=MA:0002507]) [-2] ! parse: GO:0044239 using "salivary polysaccharide catabolism" => cdef(GO:0000272, [OBO_REL:unfolds_in=MA:0002507]) [-2] ! parse: GO:0044239 using "salivary polysaccharide degradation" => cdef(GO:0000272, [OBO_REL:unfolds_in=MA:0002507]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the breakdown of polysaccharides by salivary amylase. Salivary amylase is released by salivary glands, usually in the mouth." ! PROPOSED: polysaccharide catabolic process that OBO_REL:unfolds_in saliva [cdef(GO:0000272, [OBO_REL:unfolds_in=MA:0002507])] [Term] id: GO:0044239 ! salivary polysaccharide catabolic process intersection_of: GO:0000272 ! polysaccharide catabolic process intersection_of: OBO_REL:unfolds_in MA:0002507 ! saliva ! seconds spent parsing GO:0044239: 22.02 ! parsing: GO:0044258 ! parse: GO:0044258 using "intestinal lipid breakdown" => cdef(GO:0016042, [OBO_REL:unfolds_in=MA:0000328]) [-2] ! parse: GO:0044258 using "intestinal lipid catabolic process" => cdef(GO:0016042, [OBO_REL:unfolds_in=MA:0000328]) [-2] ! parse: GO:0044258 using "intestinal lipid catabolism" => cdef(GO:0016042, [OBO_REL:unfolds_in=MA:0000328]) [-2] ! parse: GO:0044258 using "intestinal lipid degradation" => cdef(GO:0016042, [OBO_REL:unfolds_in=MA:0000328]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the breakdown into fatty acids and monoglycerides of lipids in the small intestine. Lipids are broken down by lipases released by the pancreas." ! PROPOSED: lipid catabolic process that OBO_REL:unfolds_in intestine [cdef(GO:0016042, [OBO_REL:unfolds_in=MA:0000328])] [Term] id: GO:0044258 ! intestinal lipid catabolic process intersection_of: GO:0016042 ! lipid catabolic process intersection_of: OBO_REL:unfolds_in MA:0000328 ! intestine synonym: "intestinal lipolysis" EXACT [OBOL:automatic] synonym: "lipolysis in intestine" EXACT [OBOL:automatic] synonym: "lipolysis in the intestine" EXACT [OBOL:automatic] synonym: "lipolysis through the intestine" EXACT [OBOL:automatic] ! seconds spent parsing GO:0044258: 22.02 ! parsing: GO:0045026 ! parse: GO:0045026 using "plasma membrane fusion" => cdef(GO:0009987, [OBO_REL:results_in_fusion_of=GO:0005886]) [-2] ! no existing xp def ! def: "The joining of two or more lipid bilayer membranes that surround a cell." ! PROPOSED: cellular process that OBO_REL:results_in_fusion_of plasma membrane [cdef(GO:0009987, [OBO_REL:results_in_fusion_of=GO:0005886])] [Term] id: GO:0045026 ! plasma membrane fusion intersection_of: GO:0009987 ! cellular process intersection_of: OBO_REL:results_in_fusion_of GO:0005886 ! plasma membrane synonym: "cell membrane fusion" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane fusion" EXACT [OBOL:automatic] synonym: "plasmalemma fusion" EXACT [OBOL:automatic] def: "Merging of of two or more cell membrane s within a cell to form a single component" [OBOL:automatic] ! seconds spent parsing GO:0045026: 2.72 ! parsing: GO:0045035 ! No parse for: GO:0045035 sensory organ precursor cell division ! parsing: GO:0045138 ! No parse for: GO:0045138 tail tip morphogenesis ! parsing: GO:0045189 ! No parse for: GO:0045189 connective tissue growth factor biosynthetic process ! parsing: GO:0045451 ! No parse for: GO:0045451 pole plasm oskar mRNA localization ! parsing: GO:0045453 ! No parse for: GO:0045453 bone resorption ! parsing: GO:0046151 ! No parse for: GO:0046151 eye pigment catabolic process ! parsing: GO:0046485 ! No parse for: GO:0046485 ether lipid metabolic process ! parsing: GO:0046541 ! parse: GO:0046541 using "saliva secretion" => cdef(GO:0046903, [OBO_REL:results_in_release_of=MA:0002507]) [-2] ! no existing xp def ! def: "The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin." ! PROPOSED: secretion that OBO_REL:results_in_release_of saliva [cdef(GO:0046903, [OBO_REL:results_in_release_of=MA:0002507])] [Term] id: GO:0046541 ! saliva secretion intersection_of: GO:0046903 ! secretion intersection_of: OBO_REL:results_in_release_of MA:0002507 ! saliva ! seconds spent parsing GO:0046541: 2.56 ! parsing: GO:0046619 ! parse: GO:0046619 using "optic placode formation in camera-type eye" => cdef(GO:0001743, [OBO_REL:unfolds_in=MA:0000261]) [-2] ! no existing xp def ! def: "Establishment and formation of the optic placode, paired ectodermal placodes that become invaginated to form the embryonic lens vesicles." ! PROPOSED: optic placode formation that OBO_REL:unfolds_in eye [cdef(GO:0001743, [OBO_REL:unfolds_in=MA:0000261])] [Term] id: GO:0046619 ! optic placode formation involved in camera-type eye intersection_of: GO:0001743 ! optic placode formation intersection_of: OBO_REL:unfolds_in MA:0000261 ! eye ! seconds spent parsing GO:0046619: 31.86 ! parsing: GO:0046666 ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000276])]) [-3] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=MA:0000276]) [-2] ! parse: GO:0046666 using "retinal cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000000, [OBO_REL:part_of=MA:0000276])]) [-3] ! parse: GO:0046666 using "retinal cell programmed cell death" => cdef(cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000276]) [-4] ! parse: GO:0046666 using "retinal cell programmed cell death" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000276]) [-4] ! parse: GO:0046666 using "retinal programmed cell death" => cdef(GO:0012501, [OBO_REL:unfolds_in=MA:0000276]) [-2] ! no existing xp def ! def: "Programmed cell death that occurs in the developing retina." ! PROPOSED: programmed cell death that OBO_REL:unfolds_in retina [cdef(GO:0012501, [OBO_REL:unfolds_in=MA:0000276])] [Term] id: GO:0046666 ! retinal cell programmed cell death intersection_of: GO:0012501 ! programmed cell death intersection_of: OBO_REL:unfolds_in MA:0000276 ! retina ! seconds spent parsing GO:0046666: 25.42 ! parsing: GO:0046667 ! No parse for: GO:0046667 compound eye retinal cell programmed cell death ! parsing: GO:0046692 ! No parse for: GO:0046692 sperm competition ! parsing: GO:0046693 ! No parse for: GO:0046693 sperm storage ! parsing: GO:0046694 ! No parse for: GO:0046694 sperm incapacitation ! parsing: GO:0046716 ! No parse for: GO:0046716 muscle maintenance ! parsing: GO:0046766 ! No parse for: GO:0046766 virus budding from plasma membrane ! parsing: GO:0046849 ! parse: GO:0046849 using "bone remodeling" => cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=MA:0001459]) [-2] ! no existing xp def ! def: "The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis." ! PROPOSED: developmental process that OBO_REL:results_in_remodeling_of bone [cdef(GO:0032502, [OBO_REL:results_in_remodeling_of=MA:0001459])] [Term] id: GO:0046849 ! bone remodeling intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_remodeling_of MA:0001459 ! bone ! seconds spent parsing GO:0046849: 2.91 ! parsing: GO:0048011 ! No parse for: GO:0048011 nerve growth factor receptor signaling pathway ! parsing: GO:0048036 ! No parse for: GO:0048036 central complex development ! parsing: GO:0048058 ! No parse for: GO:0048058 compound eye corneal lens development ! parsing: GO:0048067 ! No parse for: GO:0048067 cuticle pigmentation ! parsing: GO:0048069 ! No parse for: GO:0048069 eye pigmentation ! parsing: GO:0048072 ! No parse for: GO:0048072 compound eye pigmentation ! parsing: GO:0048158 ! No parse for: GO:0048158 oogonium stage, oogenesis ! parsing: GO:0048201 ! No parse for: GO:0048201 vesicle targeting, plasma membrane to endosome ! parsing: GO:0048227 ! parse: GO:0048227 using "plasma membrane to endosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005886, OBO_REL:results_in_transport_to=GO:0005768]) [-3] ! no existing xp def ! def: "Transport of a vesicle from the plasma membrane to the endosome." ! PROPOSED: transport that OBO_REL:results_in_transport_from plasma membrane and OBO_REL:results_in_transport_to endosome [cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005886, OBO_REL:results_in_transport_to=GO:0005768])] [Term] id: GO:0048227 ! plasma membrane to endosome transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_from GO:0005886 ! plasma membrane intersection_of: OBO_REL:results_in_transport_to GO:0005768 ! endosome synonym: "cytoplasmic membrane to endosome transport" EXACT [OBOL:automatic] synonym: "plasmalemma to endosome transport" EXACT [OBOL:automatic] synonym: "transport, cell membrane to endosome" EXACT [OBOL:automatic] synonym: "transport, cytoplasmic membrane to endosome" EXACT [OBOL:automatic] synonym: "transport, plasma membrane to endosome" EXACT [OBOL:automatic] synonym: "transport, plasmalemma to endosome" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048227: 2.58 ! parsing: GO:0048235 ! No parse for: GO:0048235 pollen sperm cell differentiation ! parsing: GO:0048240 ! No parse for: GO:0048240 sperm capacitation ! parsing: GO:0048314 ! No parse for: GO:0048314 embryo sac morphogenesis ! parsing: GO:0048483 ! parse: GO:0048483 using "autonomic nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000219]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of autonomic nervous system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000219])] [Term] id: GO:0048483 ! autonomic nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000219 ! autonomic nervous system ! seconds spent parsing GO:0048483: 1.43 ! parsing: GO:0048484 ! parse: GO:0048484 using "enteric nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000222]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of enteric nervous system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000222])] [Term] id: GO:0048484 ! enteric nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000222 ! enteric nervous system ! seconds spent parsing GO:0048484: 1.43 ! parsing: GO:0048485 ! parse: GO:0048485 using "sympathetic nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000225]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of sympathetic nervous system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000225])] [Term] id: GO:0048485 ! sympathetic nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000225 ! sympathetic nervous system ! seconds spent parsing GO:0048485: 1.42 ! parsing: GO:0048486 ! parse: GO:0048486 using "parasympathetic nervous system development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000223]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of parasympathetic nervous system [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000223])] [Term] id: GO:0048486 ! parasympathetic nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000223 ! parasympathetic nervous system ! seconds spent parsing GO:0048486: 1.43 ! parsing: GO:0048514 ! parse: GO:0048514 using "blood vessel morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000060]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of blood vessel [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000060])] [Term] id: GO:0048514 ! blood vessel morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000060 ! blood vessel ! seconds spent parsing GO:0048514: 2.29 ! parsing: GO:0048535 ! parse: GO:0048535 using "lymph node development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000139]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of lymph node [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000139])] [Term] id: GO:0048535 ! lymph node development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000139 ! lymph node ! seconds spent parsing GO:0048535: 4.17 ! parsing: GO:0048536 ! parse: GO:0048536 using "spleen development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000141]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of spleen [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000141])] [Term] id: GO:0048536 ! spleen development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000141 ! spleen ! seconds spent parsing GO:0048536: 1.43 ! parsing: GO:0048537 ! No parse for: GO:0048537 mucosal-associated lymphoid tissue development ! parsing: GO:0048538 ! parse: GO:0048538 using "thymus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000142]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of thymus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000142])] [Term] id: GO:0048538 ! thymus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000142 ! thymus ! seconds spent parsing GO:0048538: 1.42 ! parsing: GO:0048539 ! parse: GO:0048539 using "bone marrow development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000134]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of bone marrow [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000134])] [Term] id: GO:0048539 ! bone marrow development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000134 ! bone marrow ! seconds spent parsing GO:0048539: 2.04 ! parsing: GO:0048541 ! No parse for: GO:0048541 Peyer's patch development ! parsing: GO:0048542 ! parse: GO:0048542 using "lymph gland development" => cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=MA:0002520]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lymph gland over time, from its formation to the mature structure. The lymph gland is one of the sites of hemocyte differentiation. It consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages." ! PROPOSED: gland development that OBO_REL:results_in_developmental_progression_of lymph [cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=MA:0002520])] [Term] id: GO:0048542 ! lymph gland development intersection_of: GO:0048732 ! gland development intersection_of: OBO_REL:results_in_developmental_progression_of MA:0002520 ! lymph ! seconds spent parsing GO:0048542: 4.71 ! parsing: GO:0048547 ! parse: GO:0048547 using "gut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000917]) [-2] ! parse: GO:0048547 using "intestinal morphogenesis" => cdef(GO:0009653, [OBO_REL:unfolds_in=MA:0000328]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:unfolds_in intestine [cdef(GO:0009653, [OBO_REL:unfolds_in=MA:0000328])] [Term] id: GO:0048547 ! gut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:unfolds_in MA:0000328 ! intestine synonym: "anatomical structure morphogenesis in intestine" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis in the intestine" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis through the intestine" EXACT [OBOL:automatic] synonym: "intestinal anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048547: 6.63 ! parsing: GO:0048565 ! parse: GO:0048565 using "gut development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000917]) [-2] ! parse: GO:0048565 using "intestine development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000328]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of gut [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000917])] [Term] id: GO:0048565 ! gut development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000917 ! gut ! seconds spent parsing GO:0048565: 7.03 ! parsing: GO:0048592 ! parse: GO:0048592 using "eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000261]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of eye [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000261])] [Term] id: GO:0048592 ! eye morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000261 ! eye synonym: "anatomical structure morphogenesis of a camera-type eye" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of an camera-type eye" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of the camera-type eye" EXACT [OBOL:automatic] synonym: "camera-type eye anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "camera-type eye morphogenesis" EXACT [OBOL:automatic] synonym: "morphogenesis of a camera-type eye" EXACT [OBOL:automatic] synonym: "morphogenesis of an camera-type eye" EXACT [OBOL:automatic] synonym: "morphogenesis of the camera-type eye" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048592: 5.18 ! parsing: GO:0048593 ! parse: GO:0048593 using "camera-type eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000261]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of eye [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000261])] [Term] id: GO:0048593 ! camera-type eye morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000261 ! eye synonym: "anatomical structure morphogenesis of a camera-type eye" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of an camera-type eye" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of the camera-type eye" EXACT [OBOL:automatic] synonym: "camera-type eye anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "eye morphogenesis" EXACT [OBOL:automatic] synonym: "morphogenesis of a camera-type eye" EXACT [OBOL:automatic] synonym: "morphogenesis of an camera-type eye" EXACT [OBOL:automatic] synonym: "morphogenesis of the camera-type eye" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048593: 12.62 ! parsing: GO:0048630 ! parse: GO:0048630 using "skeletal muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000165]) [-2] ! no existing xp def ! def: "The increase in size or mass of a skeletal muscle. This may be due to a change in the fiber number or size." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of skeletal muscle [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000165])] [Term] id: GO:0048630 ! skeletal muscle growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0048630: 4.25 ! parsing: GO:0048644 ! parse: GO:0048644 using "muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000015]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of muscle [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000015])] [Term] id: GO:0048644 ! muscle morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000015 ! muscle ! seconds spent parsing GO:0048644: 1.69 ! parsing: GO:0048730 ! parse: GO:0048730 using "epidermis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000153]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the epidermis are generated and organized. Morphogenesis pertains to the creation of form. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of epidermis [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000153])] [Term] id: GO:0048730 ! epidermis morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000153 ! epidermis ! seconds spent parsing GO:0048730: 1.69 ! parsing: GO:0048733 ! parse: GO:0048733 using "sebaceous gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002565]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of sebaceous gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002565])] [Term] id: GO:0048733 ! sebaceous gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0002565 ! sebaceous gland ! seconds spent parsing GO:0048733: 1.43 ! parsing: GO:0048738 ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0007517, [OBO_REL:results_in_developmental_progression_of=MA:0000072]) [-2] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000015, OBO_REL:unfolds_in=MA:0000072]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure." ! PROPOSED: muscle development that OBO_REL:results_in_developmental_progression_of heart [cdef(GO:0007517, [OBO_REL:results_in_developmental_progression_of=MA:0000072])] [Term] id: GO:0048738 ! cardiac muscle development intersection_of: GO:0007517 ! muscle development intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000072 ! heart ! seconds spent parsing GO:0048738: 3.05 ! parsing: GO:0048739 ! No parse for: GO:0048739 cardiac muscle fiber development ! parsing: GO:0048741 ! No parse for: GO:0048741 skeletal muscle fiber development ! parsing: GO:0048745 ! parse: GO:0048745 using "smooth muscle development" => cdef(GO:0007517, [OBO_REL:has_quality=PATO:0000701]) [-2] ! parse: GO:0048745 using "smooth muscle development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000166]) [-2] ! parse: GO:0048745 using "smooth muscle development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000015]), [OBO_REL:has_quality=PATO:0000701]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of smooth muscle [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000166])] [Term] id: GO:0048745 ! smooth muscle development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000166 ! smooth muscle ! seconds spent parsing GO:0048745: 2.07 ! parsing: GO:0048747 ! No parse for: GO:0048747 muscle fiber development ! parsing: GO:0048749 ! No parse for: GO:0048749 compound eye development ! parsing: GO:0048750 ! No parse for: GO:0048750 compound eye corneal lens morphogenesis ! parsing: GO:0048752 ! parse: GO:0048752 using "embryonic semicircular canal morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000249]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0048752 using "semicircular canal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000249]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the semicircular canals are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of semicircular canal [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000249])] [Term] id: GO:0048752 ! semicircular canal morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000249 ! semicircular canal ! seconds spent parsing GO:0048752: 5.04 ! parsing: GO:0048820 ! parse: GO:0048820 using "hair follicle maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000154]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of hair follicle [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000154])] [Term] id: GO:0048820 ! hair follicle maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000154 ! hair follicle ! seconds spent parsing GO:0048820: 1.43 ! parsing: GO:0048839 ! parse: GO:0048839 using "inner ear development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000237]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of inner ear [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000237])] [Term] id: GO:0048839 ! inner ear development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000237 ! inner ear ! seconds spent parsing GO:0048839: 1.44 ! parsing: GO:0048844 ! parse: GO:0048844 using "arterial morphogenesis" => cdef(GO:0009653, [OBO_REL:unfolds_in=MA:0000064]) [-2] ! parse: GO:0048844 using "artery morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000064]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:unfolds_in artery [cdef(GO:0009653, [OBO_REL:unfolds_in=MA:0000064])] [Term] id: GO:0048844 ! artery morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:unfolds_in MA:0000064 ! artery synonym: "anatomical structure morphogenesis in artery" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis in the artery" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis through the artery" EXACT [OBOL:automatic] synonym: "arterial anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "arterie anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "arterie morphogenesis" EXACT [OBOL:automatic] synonym: "arteries anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "arteries morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048844: 5.89 ! parsing: GO:0048845 ! parse: GO:0048845 using "venous blood vessel morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000066]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of venous blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Veins are blood vessels that transport blood from the body and its organs to the heart." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of venous blood vessel [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000066])] [Term] id: GO:0048845 ! venous blood vessel morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000066 ! venous blood vessel ! seconds spent parsing GO:0048845: 2.58 ! parsing: GO:0048847 ! parse: GO:0048847 using "adenohypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000177]) [-2] ! parse: GO:0048847 using "adenohypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000177]) [-2] ! parse: GO:0048847 using "anterior pituitary gland biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000055])]) [-3] ! parse: GO:0048847 using "anterior pituitary gland biosynthesis" => cdef(GO:0048851, [OBO_REL:has_quality=PATO:0001632]) [-2] ! parse: GO:0048847 using "anterior pituitary gland biosynthesis" => cdef(cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001632]) [-4] ! parse: GO:0048847 using "anterior pituitary gland formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000055])]) [-3] ! parse: GO:0048847 using "anterior pituitary gland formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000055])]) [-3] ! parse: GO:0048847 using "anterior pituitary gland formation" => cdef(GO:0048851, [OBO_REL:has_quality=PATO:0001632]) [-2] ! parse: GO:0048847 using "anterior pituitary gland formation" => cdef(cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001632]) [-4] ! parse: GO:0048847 using "anterior pituitary gland formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001632]) [-4] ! no existing xp def ! def: "The process that gives rise to adenohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." ! PROPOSED: hypophysis formation that OBO_REL:has_quality anterior to [cdef(GO:0048851, [OBO_REL:has_quality=PATO:0001632])] [Term] id: GO:0048847 ! adenohypophysis formation intersection_of: GO:0048851 ! hypophysis formation intersection_of: OBO_REL:has_quality PATO:0001632 ! anterior to synonym: "anterior to hypophysis biosynthesis" EXACT [OBOL:automatic] synonym: "anterior to hypophysis formation" EXACT [OBOL:automatic] synonym: "anterior to pituitary gland biosynthesis" EXACT [OBOL:automatic] synonym: "anterior to pituitary gland formation" EXACT [OBOL:automatic] synonym: "preceding hypophysis biosynthesis" EXACT [OBOL:automatic] synonym: "preceding hypophysis formation" EXACT [OBOL:automatic] synonym: "preceding pituitary gland biosynthesis" EXACT [OBOL:automatic] synonym: "preceding pituitary gland formation" EXACT [OBOL:automatic] synonym: "rostral to hypophysis biosynthesis" EXACT [OBOL:automatic] synonym: "rostral to hypophysis formation" EXACT [OBOL:automatic] synonym: "rostral to pituitary gland biosynthesis" EXACT [OBOL:automatic] synonym: "rostral to pituitary gland formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048847: 15.43 ! parsing: GO:0048848 ! parse: GO:0048848 using "neurohypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000178]) [-2] ! parse: GO:0048848 using "posterior pituitary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000056])]) [-3] ! parse: GO:0048848 using "posterior pituitary gland morphogenesis" => cdef(GO:0048850, [OBO_REL:has_quality=PATO:0001633]) [-2] ! parse: GO:0048848 using "posterior pituitary gland morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001633]) [-4] ! no existing xp def ! def: "The process by which the anatomical structures of neurohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." ! PROPOSED: hypophysis morphogenesis that OBO_REL:has_quality posterior to [cdef(GO:0048850, [OBO_REL:has_quality=PATO:0001633])] [Term] id: GO:0048848 ! neurohypophysis morphogenesis intersection_of: GO:0048850 ! hypophysis morphogenesis intersection_of: OBO_REL:has_quality PATO:0001633 ! posterior to synonym: "caudal to hypophysis morphogenesis" EXACT [OBOL:automatic] synonym: "caudal to pituitary gland morphogenesis" EXACT [OBOL:automatic] synonym: "posterior to hypophysis morphogenesis" EXACT [OBOL:automatic] synonym: "posterior to pituitary gland morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048848: 8.51 ! parsing: GO:0048849 ! parse: GO:0048849 using "neurohypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000178]) [-2] ! parse: GO:0048849 using "neurohypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000178]) [-2] ! parse: GO:0048849 using "posterior pituitary gland biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000056])]) [-3] ! parse: GO:0048849 using "posterior pituitary gland biosynthesis" => cdef(GO:0048851, [OBO_REL:has_quality=PATO:0001633]) [-2] ! parse: GO:0048849 using "posterior pituitary gland biosynthesis" => cdef(cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001633]) [-4] ! parse: GO:0048849 using "posterior pituitary gland formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000056])]) [-3] ! parse: GO:0048849 using "posterior pituitary gland formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000056])]) [-3] ! parse: GO:0048849 using "posterior pituitary gland formation" => cdef(GO:0048851, [OBO_REL:has_quality=PATO:0001633]) [-2] ! parse: GO:0048849 using "posterior pituitary gland formation" => cdef(cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001633]) [-4] ! parse: GO:0048849 using "posterior pituitary gland formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001633]) [-4] ! no existing xp def ! def: "The process that gives rise to neurohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." ! PROPOSED: hypophysis formation that OBO_REL:has_quality posterior to [cdef(GO:0048851, [OBO_REL:has_quality=PATO:0001633])] [Term] id: GO:0048849 ! neurohypophysis formation intersection_of: GO:0048851 ! hypophysis formation intersection_of: OBO_REL:has_quality PATO:0001633 ! posterior to synonym: "caudal to hypophysis biosynthesis" EXACT [OBOL:automatic] synonym: "caudal to hypophysis formation" EXACT [OBOL:automatic] synonym: "caudal to pituitary gland biosynthesis" EXACT [OBOL:automatic] synonym: "caudal to pituitary gland formation" EXACT [OBOL:automatic] synonym: "posterior to hypophysis biosynthesis" EXACT [OBOL:automatic] synonym: "posterior to hypophysis formation" EXACT [OBOL:automatic] synonym: "posterior to pituitary gland biosynthesis" EXACT [OBOL:automatic] synonym: "posterior to pituitary gland formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048849: 11.01 ! parsing: GO:0048850 ! parse: GO:0048850 using "pituitary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000176]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of pituitary gland [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000176])] [Term] id: GO:0048850 ! hypophysis morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000176 ! pituitary gland ! seconds spent parsing GO:0048850: 0.89 ! parsing: GO:0048851 ! parse: GO:0048851 using "pituitary gland biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000176]) [-2] ! parse: GO:0048851 using "pituitary gland formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000176]) [-2] ! parse: GO:0048851 using "pituitary gland formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000176]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The hypophysis is an endocrine gland that secretes hormones that regulate many other glands." ! PROPOSED: biosynthetic process that OBO_REL:results_in_formation_of pituitary gland [cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000176])] [Term] id: GO:0048851 ! hypophysis formation intersection_of: GO:0009058 ! biosynthetic process intersection_of: OBO_REL:results_in_formation_of MA:0000176 ! pituitary gland ! seconds spent parsing GO:0048851: 1.8 ! parsing: GO:0048852 ! parse: GO:0048852 using "diencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000171]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of diencephalon are generated and organized. Morphogenesis pertains to the creation of form. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of diencephalon [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000171])] [Term] id: GO:0048852 ! diencephalon morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000171 ! diencephalon ! seconds spent parsing GO:0048852: 1.69 ! parsing: GO:0048853 ! parse: GO:0048853 using "forebrain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of forebrain [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000170])] [Term] id: GO:0048853 ! forebrain morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000170 ! forebrain synonym: "anatomical structure morphogenesis of a forebrain" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of an forebrain" EXACT [OBOL:automatic] synonym: "anatomical structure morphogenesis of the forebrain" EXACT [OBOL:automatic] synonym: "morphogenesis of a forebrain" EXACT [OBOL:automatic] synonym: "morphogenesis of an forebrain" EXACT [OBOL:automatic] synonym: "morphogenesis of the forebrain" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048853: 2.58 ! parsing: GO:0048854 ! parse: GO:0048854 using "brain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000168]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of brain [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000168])] [Term] id: GO:0048854 ! brain morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000168 ! brain ! seconds spent parsing GO:0048854: 1.69 ! parsing: GO:0048855 ! parse: GO:0048855 using "adenohypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000177]) [-2] ! parse: GO:0048855 using "anterior pituitary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000176, [OBO_REL:has_quality=BSPO:0000055])]) [-3] ! parse: GO:0048855 using "anterior pituitary gland morphogenesis" => cdef(GO:0048850, [OBO_REL:has_quality=PATO:0001632]) [-2] ! parse: GO:0048855 using "anterior pituitary gland morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000176]), [OBO_REL:has_quality=PATO:0001632]) [-4] ! no existing xp def ! def: "The process by which the anatomical structures of the adenohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." ! PROPOSED: hypophysis morphogenesis that OBO_REL:has_quality anterior to [cdef(GO:0048850, [OBO_REL:has_quality=PATO:0001632])] [Term] id: GO:0048855 ! adenohypophysis morphogenesis intersection_of: GO:0048850 ! hypophysis morphogenesis intersection_of: OBO_REL:has_quality PATO:0001632 ! anterior to synonym: "anterior to hypophysis morphogenesis" EXACT [OBOL:automatic] synonym: "anterior to pituitary gland morphogenesis" EXACT [OBOL:automatic] synonym: "preceding hypophysis morphogenesis" EXACT [OBOL:automatic] synonym: "preceding pituitary gland morphogenesis" EXACT [OBOL:automatic] synonym: "rostral to hypophysis morphogenesis" EXACT [OBOL:automatic] synonym: "rostral to pituitary gland morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048855: 6.3 ! parsing: GO:0048934 ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000218]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of peripheral nervous system [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000218])] [Term] id: GO:0048934 ! peripheral nervous system neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000218 ! peripheral nervous system synonym: "neuron differentiation of a peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron differentiation of an peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron differentiation of the peripheral nervous system" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048934: 2.91 ! parsing: GO:0048935 ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000540, [OBO_REL:part_of=MA:0000218])]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000218]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron." ! PROPOSED: developmental process that OBO_REL:results_in_developmental_progression_of neuron and OBO_REL:unfolds_in peripheral nervous system [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000218])] [Term] id: GO:0048935 ! peripheral nervous system neuron development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_developmental_progression_of CL:0000540 ! neuron intersection_of: OBO_REL:unfolds_in MA:0000218 ! peripheral nervous system ! seconds spent parsing GO:0048935: 2.49 ! parsing: GO:0048936 ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000540, [OBO_REL:part_of=MA:0000218])]) [-3] ! no existing xp def ! def: "Generation of a long process from a neuron whose cell body resides in the peripheral nervous system. The axon carries action potential from the cell body towards target cells." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of cdef(CL:0000540, [OBO_REL:part_of=MA:0000218]) [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(CL:0000540, [OBO_REL:part_of=MA:0000218])])] [Term] id: GO:0048936 ! peripheral nervous system neuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of _:nerve_cell_of_peripheral_nervous_system synonym: "axonogenesis of a nerve cell of peripheral nervous system" EXACT [OBOL:automatic] synonym: "axonogenesis of a nerve cell of the peripheral nervous system" EXACT [OBOL:automatic] synonym: "axonogenesis of an nerve cell of peripheral nervous system" EXACT [OBOL:automatic] synonym: "axonogenesis of an nerve cell of the peripheral nervous system" EXACT [OBOL:automatic] synonym: "axonogenesis of the nerve cell of peripheral nervous system" EXACT [OBOL:automatic] synonym: "axonogenesis of the nerve cell of the peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron long process generation of a nerve cell of peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron long process generation of a nerve cell of the peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron long process generation of an nerve cell of peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron long process generation of an nerve cell of the peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron long process generation of the nerve cell of peripheral nervous system" EXACT [OBOL:automatic] synonym: "neuron long process generation of the nerve cell of the peripheral nervous system" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048936: 2.08 ! parsing: GO:0050891 ! No parse for: GO:0050891 multicellular organismal water homeostasis ! parsing: GO:0050892 ! No parse for: GO:0050892 intestinal absorption ! parsing: GO:0050983 ! No parse for: GO:0050983 spermidine catabolic process to deoxyhypusine, using deoxyhypusine synthase ! parsing: GO:0051216 ! parse: GO:0051216 using "cartilage biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000104]) [-2] ! parse: GO:0051216 using "cartilage development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000104]) [-2] ! parse: GO:0051216 using "cartilage formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000104]) [-2] ! parse: GO:0051216 using "cartilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000104]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate." ! PROPOSED: biosynthetic process that OBO_REL:results_in_formation_of cartilage [cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000104])] [Term] id: GO:0051216 ! cartilage development intersection_of: GO:0009058 ! biosynthetic process intersection_of: OBO_REL:results_in_formation_of MA:0000104 ! cartilage ! seconds spent parsing GO:0051216: 7.24 ! parsing: GO:0051663 ! parse: GO:0051663 using "oocyte axis determination, oocyte nucleus localization" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:part_of=GO:0007309]) [-4] ! parse: GO:0051663 using "oocyte axis determination, oocyte nucleus localization" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023])]) [-5] ! parse: GO:0051663 using "oocyte axis determination, oocyte nucleus localization" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_specification_of=CL:0000023])]) [-5] ! parse: GO:0051663 using "oocyte axis determination, oocyte nucleus localization" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023])]) [-5] ! parse: GO:0051663 using "oocyte nucleus localization during oocyte axis determination" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:happens_during=GO:0007309]) [-4] ! parse: GO:0051663 using "oocyte nucleus localization during oocyte axis determination" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:happens_during=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023])]) [-5] ! parse: GO:0051663 using "oocyte nucleus localization during oocyte axis determination" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:happens_during=cdef(GO:0009798, [OBO_REL:results_in_specification_of=CL:0000023])]) [-5] ! parse: GO:0051663 using "oocyte nucleus localization during oocyte axis determination" => cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:happens_during=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023])]) [-5] ! no existing xp def ! def: "The directed movement of the nucleus to a specific location within a cell during the establishment and maintenance of the axes of the oocyte." ! PROPOSED: cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]) that OBO_REL:part_of oocyte axis determination [cdef(cdef(GO:0051647, [OBO_REL:results_in_localization_of=CL:0000023]), [OBO_REL:part_of=GO:0007309])] [Term] id: GO:0051663 ! oocyte nucleus localization during oocyte axis determination intersection_of: _:oocyte_nucleus_localization intersection_of: OBO_REL:part_of GO:0007309 ! oocyte axis determination synonym: "oocyte axis determination, oocyte nucleus localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051663: 24.34 ! parsing: GO:0055003 ! No parse for: GO:0055003 cardiac myofibril assembly ! parsing: GO:0055006 ! No parse for: GO:0055006 cardiac cell development ! parsing: GO:0055008 ! No parse for: GO:0055008 cardiac muscle morphogensis ! parsing: GO:0055017 ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])]) [-3] ! no existing xp def ! def: "The increase in size or mass of a cardiac muscle, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of cdef(MA:0000015, [OBO_REL:part_of=MA:0000072]) [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])])] [Term] id: GO:0055017 ! cardiac muscle growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of _:cdef__MA_0000015_____OBO_REL_part_of___MA_0000072___ ! seconds spent parsing GO:0055017: 3.12 ! parsing: GO:0060017 ! parse: GO:0060017 using "parathyroid gland development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000128]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of parathyroid gland [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000128])] [Term] id: GO:0060017 ! parathyroid gland development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000128 ! parathyroid gland ! seconds spent parsing GO:0060017: 1.43 ! parsing: GO:0060021 ! parse: GO:0060021 using "palate development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002476]) [-2] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of palate [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002476])] [Term] id: GO:0060021 ! palate development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0002476 ! palate ! seconds spent parsing GO:0060021: 2.33 ! parsing: GO:0060022 ! parse: GO:0060022 using "hard palate development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002477]) [-2] ! parse: GO:0060022 using "hard palate development" => cdef(GO:0060021, [OBO_REL:has_quality=PATO:0000386]) [-2] ! parse: GO:0060022 using "hard palate development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002476]), [OBO_REL:has_quality=PATO:0000386]) [-4] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes." ! PROPOSED: palate development that OBO_REL:has_quality hard [cdef(GO:0060021, [OBO_REL:has_quality=PATO:0000386])] [Term] id: GO:0060022 ! hard palate development intersection_of: GO:0060021 ! palate development intersection_of: OBO_REL:has_quality PATO:0000386 ! hard ! seconds spent parsing GO:0060022: 2.98 ! parsing: GO:0060023 ! parse: GO:0060023 using "soft palate development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002412]) [-2] ! parse: GO:0060023 using "soft palate development" => cdef(GO:0060021, [OBO_REL:has_quality=PATO:0000387]) [-2] ! parse: GO:0060023 using "soft palate development" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0002476]), [OBO_REL:has_quality=PATO:0000387]) [-4] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate." ! PROPOSED: palate development that OBO_REL:has_quality soft [cdef(GO:0060021, [OBO_REL:has_quality=PATO:0000387])] [Term] id: GO:0060023 ! soft palate development intersection_of: GO:0060021 ! palate development intersection_of: OBO_REL:has_quality PATO:0000387 ! soft ! seconds spent parsing GO:0060023: 3.67 ! parsing: GO:0060037 ! parse: GO:0060037 using "pharyngeal system development" => cdef(GO:0048731, [OBO_REL:unfolds_in=MA:0000432]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear." ! PROPOSED: system development that OBO_REL:unfolds_in pharynx [cdef(GO:0048731, [OBO_REL:unfolds_in=MA:0000432])] [Term] id: GO:0060037 ! pharyngeal system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:unfolds_in MA:0000432 ! pharynx ! seconds spent parsing GO:0060037: 4.21 ! parsing: GO:0060039 ! parse: GO:0060039 using "pericardium development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000099]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of pericardium [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000099])] [Term] id: GO:0060039 ! pericardium development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000099 ! pericardium ! seconds spent parsing GO:0060039: 1.44 ! parsing: GO:0060041 ! parse: GO:0060041 using "retina development in camera-type eye" => cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000276]), [OBO_REL:unfolds_in=MA:0000261]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates." ! PROPOSED: cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000276]) that OBO_REL:unfolds_in eye [cdef(cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000276]), [OBO_REL:unfolds_in=MA:0000261])] [Term] id: GO:0060041 ! retina development in camera-type eye intersection_of: _:cdef__GO_0032502_____OBO_REL_results_in_complete_development_of___MA_0000276___ intersection_of: OBO_REL:unfolds_in MA:0000261 ! eye ! seconds spent parsing GO:0060041: 4.5 ! parsing: GO:0060042 ! parse: GO:0060042 using "retina morphogenesis in camera-type eye" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000276]), [OBO_REL:unfolds_in=MA:0000261]) [-4] ! no existing xp def ! def: "The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000276]) that OBO_REL:unfolds_in eye [cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000276]), [OBO_REL:unfolds_in=MA:0000261])] [Term] id: GO:0060042 ! retina morphogenesis in camera-type eye intersection_of: _:cdef__GO_0009653_____OBO_REL_results_in_developmental_progression_of___MA_0000276___ intersection_of: OBO_REL:unfolds_in MA:0000261 ! eye ! seconds spent parsing GO:0060042: 4.49 ! parsing: GO:0060047 ! parse: GO:0060047 using "heart contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000072]) [-2] ! no existing xp def ! def: "The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to heart [cdef(GO:0006936, [OBO_REL:results_in_change_to=MA:0000072])] [Term] id: GO:0060047 ! heart contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to MA:0000072 ! heart ! seconds spent parsing GO:0060047: 2.95 ! parsing: GO:0060048 ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])]) [-3] ! no existing xp def ! def: "Muscle contraction of cardiac muscle tissue." ! PROPOSED: muscle contraction that OBO_REL:results_in_change_to cdef(MA:0000015, [OBO_REL:part_of=MA:0000072]) [cdef(GO:0006936, [OBO_REL:results_in_change_to=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])])] [Term] id: GO:0060048 ! cardiac muscle contraction intersection_of: GO:0006936 ! muscle contraction intersection_of: OBO_REL:results_in_change_to _:cdef__MA_0000015_____OBO_REL_part_of___MA_0000072___ ! seconds spent parsing GO:0060048: 3.03 ! parsing: GO:0060056 ! No parse for: GO:0060056 mammary gland involution ! parsing: GO:0060065 ! parse: GO:0060065 using "uterus development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000389]) [-2] ! no existing xp def ! def: "The reproductive developmental process whose specific outcome is the progression of the uterus over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of uterus [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000389])] [Term] id: GO:0060065 ! uterus development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000389 ! uterus ! seconds spent parsing GO:0060065: 1.44 ! parsing: GO:0060066 ! No parse for: GO:0060066 fallopian tube development ! parsing: GO:0060068 ! parse: GO:0060068 using "vagina development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000394]) [-2] ! no existing xp def ! def: "The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of vagina [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000394])] [Term] id: GO:0060068 ! vagina development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000394 ! vagina ! seconds spent parsing GO:0060068: 1.44 ! parsing: GO:0060073 ! No parse for: GO:0060073 micturition ! parsing: GO:0060082 ! No parse for: GO:0060082 eye blink reflex ! parsing: GO:0060113 ! parse: GO:0060113 using "inner ear hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=MA:0000237]) [-2] ! no existing xp def ! def: "The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound." ! PROPOSED: hair cell differentiation that OBO_REL:results_in_developmental_progression_of inner ear [cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=MA:0000237])] [Term] id: GO:0060113 ! inner ear receptor cell differentiation intersection_of: GO:0035315 ! hair cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000237 ! inner ear ! seconds spent parsing GO:0060113: 7.61 ! parsing: GO:0060119 ! parse: GO:0060119 using "inner ear hair cell development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000299, [OBO_REL:part_of=MA:0000237])]) [-3] ! parse: GO:0060119 using "inner ear hair cell development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000374, [OBO_REL:part_of=MA:0000237])]) [-3] ! parse: GO:0060119 using "inner ear hair cell development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000855, [OBO_REL:part_of=MA:0000237])]) [-3] ! parse: GO:0060119 using "inner ear hair cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000299, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060119 using "inner ear hair cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000374, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060119 using "inner ear hair cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000855, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=cdef(CL:0000197, [OBO_REL:part_of=MA:0000237])]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000197, OBO_REL:unfolds_in=MA:0000237]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of an inner ear receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate." ! PROPOSED: developmental process that OBO_REL:results_in_developmental_progression_of hair cell and OBO_REL:unfolds_in inner ear [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000855, OBO_REL:unfolds_in=MA:0000237])] [Term] id: GO:0060119 ! inner ear receptor cell development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_developmental_progression_of CL:0000855 ! hair cell intersection_of: OBO_REL:unfolds_in MA:0000237 ! inner ear ! seconds spent parsing GO:0060119: 5.16 ! parsing: GO:0060120 ! No parse for: GO:0060120 inner ear receptor cell fate commitment ! parsing: GO:0060122 ! No parse for: GO:0060122 inner ear receptor stereocilium organization and biogenesis ! parsing: GO:0060157 ! parse: GO:0060157 using "urinary bladder development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000380]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of urinary bladder [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000380])] [Term] id: GO:0060157 ! urinary bladder development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000380 ! urinary bladder ! seconds spent parsing GO:0060157: 1.44 ! parsing: GO:0060173 ! parse: GO:0060173 using "limb development" => cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000007]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin." ! PROPOSED: developmental process that OBO_REL:results_in_complete_development_of limb [cdef(GO:0032502, [OBO_REL:results_in_complete_development_of=MA:0000007])] [Term] id: GO:0060173 ! limb development intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000007 ! limb ! seconds spent parsing GO:0060173: 1.44 ! parsing: GO:0060174 ! parse: GO:0060174 using "limb formation" => cdef(GO:0009058, [OBO_REL:results_in_formation_of=MA:0000007]) [-2] ! parse: GO:0060174 using "limb formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000007]) [-2] ! no existing xp def ! def: "The process pertaining to the initial formation of a limb bud from unspecified parts. This process begins with the formation of a local condensation of mesenchyme cells within the prospective limb field ends when a limb bud is recognizable." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of limb [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000007])] [Term] id: GO:0060174 ! limb bud formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000007 ! limb ! seconds spent parsing GO:0060174: 4.15 ! parsing: GO:0060185 ! No parse for: GO:0060185 outer ear unfolding ! parsing: GO:0060186 ! No parse for: GO:0060186 outer ear emergence ! anonymous primitive or inner classes created as by-products: [Term] id: _:cdef__CL_0000000_____OBO_REL_part_of___MA_0000016___ intersection_of: CL:0000000 ! cell intersection_of: OBO_REL:part_of MA:0000016 ! nervous system def: "A cell that is part of a nervous system" [OBOL:automatic] [Term] id: _:ovarian_nurse_cell intersection_of: CL:0000026 ! nurse cell intersection_of: OBO_REL:part_of MA:0000384 ! ovary synonym: "ovarian nurse cell" EXACT [OBOL:automatic] synonym: "ovarian nurse cell cell" EXACT [OBOL:automatic] synonym: "ovarie nurse cell" EXACT [OBOL:automatic] synonym: "ovarie nurse cell cell" EXACT [OBOL:automatic] synonym: "ovaries nurse cell" EXACT [OBOL:automatic] synonym: "ovaries nurse cell cell" EXACT [OBOL:automatic] def: "A nurse cell that is part of a ovary" [OBOL:automatic] [Term] id: _:cdef__CL_0000099_____OBO_REL_part_of___MA_0000167___ intersection_of: CL:0000099 ! interneuron intersection_of: OBO_REL:part_of MA:0000167 ! central nervous system def: "A interneuron that is part of a central nervous system" [OBOL:automatic] [Term] id: _:ovarian_follicle_cell_cell intersection_of: CL:0000477 ! follicle cell intersection_of: OBO_REL:part_of MA:0000384 ! ovary synonym: "ovarian follicle cell cell" EXACT [OBOL:automatic] synonym: "ovarie follicle cell cell" EXACT [OBOL:automatic] synonym: "ovaries follicle cell cell" EXACT [OBOL:automatic] def: "A follicle cell that is part of a ovary" [OBOL:automatic] [Term] id: _:cdef__CL_0000540_____OBO_REL_part_of___MA_0000167___ intersection_of: CL:0000540 ! neuron intersection_of: OBO_REL:part_of MA:0000167 ! central nervous system def: "A nerve cell that is part of a central nervous system" [OBOL:automatic] [Term] id: _:nerve_cell_of_peripheral_nervous_system intersection_of: CL:0000540 ! neuron intersection_of: OBO_REL:part_of MA:0000218 ! peripheral nervous system synonym: "nerve cell of peripheral nervous system" EXACT [OBOL:automatic] synonym: "nerve cell of the peripheral nervous system" EXACT [OBOL:automatic] def: "A nerve cell that is part of a peripheral nervous system" [OBOL:automatic] [Term] id: _:cdef__CL_0000598_____OBO_REL_part_of___MA_0000167___ intersection_of: CL:0000598 ! pyramidal cell intersection_of: OBO_REL:part_of MA:0000167 ! central nervous system def: "A projection neuron that is part of a central nervous system" [OBOL:automatic] [Term] id: _:cdef__GO_0005634_____OBO_REL_part_of___MA_0002507___ intersection_of: GO:0005634 ! nucleus intersection_of: OBO_REL:part_of MA:0002507 ! saliva def: "A nucleus that is part of a saliva" [OBOL:automatic] [Term] id: _:oocyte_nucleus_anchoring intersection_of: GO:0008150 ! biological_process intersection_of: OBO_REL:results_in_connection_of CL:0000023 ! oocyte intersection_of: OBO_REL:results_in_connection_of GO:0005634 ! nucleus synonym: "oocyte nucleus anchoring" EXACT [OBOL:automatic] def: "A biological process by which a oocyte and a nucleus become attached" [OBOL:automatic] [Term] id: _:blood_vessel_endothelial_cell_cell_proliferation intersection_of: GO:0008283 ! cell proliferation intersection_of: OBO_REL:increases_population_size_of CL:0000071 ! blood vessel endothelial cell synonym: "blood vessel endothelial cell cell cell proliferation" EXACT [OBOL:automatic] synonym: "blood vessel endothelial cell cell proliferation" EXACT [OBOL:automatic] [Term] id: _:cdef__GO_0009653_____OBO_REL_results_in_developmental_progression_of___MA_0000276___ intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000276 ! retina [Term] id: _:follicle_cell_cell_cell_migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of CL:0000477 ! follicle cell synonym: "follicle cell cell cell migration" EXACT [OBOL:automatic] synonym: "follicle cell cell migration" EXACT [OBOL:automatic] synonym: "follicle cell migration" EXACT [OBOL:automatic] [Term] id: _:cdef__GO_0032502_____OBO_REL_results_in_complete_development_of___GO_0005634___ intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of GO:0005634 ! nucleus synonym: "nucleus development" EXACT [OBOL:automatic] [Term] id: _:cdef__GO_0032502_____OBO_REL_results_in_complete_development_of___MA_0000276___ intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_complete_development_of MA:0000276 ! retina [Term] id: _:tracheal_system_development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:unfolds_in MA:0000441 ! trachea synonym: "tracheal system development" EXACT [OBOL:automatic] [Term] id: _:cdef__GO_0051179_____OBO_REL_results_in_localization_of___CL_0000023___ intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of CL:0000023 ! oocyte synonym: "oocyte localization" EXACT [OBOL:automatic] [Term] id: _:oocyte_nucleus_localization intersection_of: GO:0051647 ! nucleus localization intersection_of: OBO_REL:results_in_localization_of CL:0000023 ! oocyte synonym: "oocyte nucleus localization" EXACT [OBOL:automatic] [Term] id: _:cdef__MA_0000015_____OBO_REL_part_of___MA_0000072___ intersection_of: MA:0000015 ! muscle intersection_of: OBO_REL:part_of MA:0000072 ! heart def: "A muscle that is part of a heart" [OBOL:automatic] [Term] id: _:cdef__MA_0000166_____OBO_REL_part_of___MA_0000067___ intersection_of: MA:0000166 ! smooth muscle intersection_of: OBO_REL:part_of MA:0000067 ! vein def: "A smooth muscle that is part of a vein" [OBOL:automatic] [Term] id: _:cdef__MA_0000166_____OBO_REL_part_of___MA_0000378___ intersection_of: MA:0000166 ! smooth muscle intersection_of: OBO_REL:part_of MA:0000378 ! ureter def: "A smooth muscle that is part of a ureter" [OBOL:automatic] [Term] id: _:cdef__MA_0000166_____OBO_REL_part_of___MA_0001612___ intersection_of: MA:0000166 ! smooth muscle intersection_of: OBO_REL:part_of MA:0001612 ! stomach fundus def: "A smooth muscle that is part of a stomach fundus" [OBOL:automatic] [Term] id: _:cdef__MA_0000166_____OBO_REL_part_of___MA_0002559___ intersection_of: MA:0000166 ! smooth muscle intersection_of: OBO_REL:part_of MA:0002559 ! stomach body def: "A smooth muscle that is part of a stomach body" [OBOL:automatic] [Term] id: _:cdef__PATO_0001025_____OBO_REL_inheres_in___MA_0000059___ intersection_of: PATO:0001025 ! pressure intersection_of: OBO_REL:inheres_in MA:0000059 ! blood synonym: "blood pressure" EXACT [OBOL:automatic] [Term] id: _:lymphocyte_polarity intersection_of: PATO:0001769 ! polarity intersection_of: OBO_REL:inheres_in CL:0000542 ! lymphocyte synonym: "lymphocyte cell polarity" EXACT [OBOL:automatic] synonym: "lymphocyte polarity" EXACT [OBOL:automatic]