Gene Ontology
Ontology Comparison Report
==========================

Files used:
- file 1 (old): go-2011-12-10.obo; date: 09:12:2011 12:27; CVS revision: 1.2428
- file 2 (new): go-2011-12-17.obo; date: 15:12:2011 15:48; CVS revision: 1.2455

NEW TERMS
=========

ID	name	namespace
GO:0036044	protein malonylation	biological_process
GO:0036045	peptidyl-lysine malonylation	biological_process
GO:0036046	protein demalonylation	biological_process
GO:0036047	peptidyl-lysine demalonylation	biological_process
GO:0036048	protein desuccinylation	biological_process
GO:0036049	peptidyl-lysine desuccinylation	biological_process
GO:0036050	peptidyl-lysine succinylation	biological_process
GO:0036051	protein localization to trailing edge	biological_process
GO:0036052	protein localization to uropod	biological_process
GO:0036053	glomerular endothelium fenestra	cellular_component
GO:0036054	protein-malonyllysine demalonylase activity	molecular_function
GO:0036055	protein-succinyllysine desuccinylase activity	molecular_function
GO:0036056	filtration diaphragm	cellular_component
GO:0036057	slit diaphragm	cellular_component
GO:0036058	filtration diaphragm assembly	biological_process
GO:0036059	nephrocyte diaphragm assembly	biological_process
GO:0036060	slit diaphragm assembly	biological_process
GO:0036061	muscle cell chemotaxis toward tendon cell	biological_process
GO:0036062	presynaptic periactive zone	cellular_component
GO:0036063	acroblast	cellular_component
GO:0036064	cilium basal body	cellular_component
GO:0036065	fucosylation	biological_process
GO:0036066	protein O-linked fucosylation	biological_process
GO:0036067	light-dependent chlorophyll biosynthetic process	biological_process
GO:0036068	light-independent chlorophyll biosynthetic process	biological_process
GO:0036069	light-dependent bacteriochlorophyll biosynthetic process	biological_process
GO:0036070	light-independent bacteriochlorophyll biosynthetic process	biological_process
GO:0036071	N-glycan fucosylation	biological_process
GO:0038055	BMP secretion	biological_process
GO:0044380	protein localization to cytoskeleton	biological_process
GO:0044382	CLRC ubiquitin ligase complex localization to heterochromatin	biological_process
GO:0044383	host chromosome	cellular_component
GO:0044384	host cell outer membrane	cellular_component
GO:0044385	integral to membrane of host cell	cellular_component
GO:0044386	integral to host endoplasmic reticulum membrane	cellular_component
GO:0044387	negative regulation of protein kinase activity by regulation of protein phosphorylation	biological_process
GO:0044388	small protein activating enzyme binding	molecular_function
GO:0044389	small conjugating protein ligase binding	molecular_function
GO:0044390	small protein conjugating enzyme binding	molecular_function
GO:0044391	ribosomal subunit	cellular_component
GO:0044392	peptidyl-lysine malonylation	biological_process
GO:0044393	microspike	cellular_component
GO:0044394	protein malonylation	biological_process
GO:0052866	phosphatidylinositol phosphate phosphatase activity	molecular_function
GO:0061392	regulation of transcription from RNA polymerase II promoter in response to osmotic stress	biological_process
GO:0061393	positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress	biological_process
GO:0061394	regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance	biological_process
GO:0061395	positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance	biological_process
GO:0090420	naphthalene-containing compound metabolic process	biological_process
GO:0097199	cysteine-type endopeptidase activity involved in apoptotic signaling pathway	molecular_function
GO:0097200	cysteine-type endopeptidase activity involved in execution phase of apoptosis	molecular_function
GO:0097201	negative regulation of transcription from RNA polymerase II promoter in response to stress	biological_process
GO:2001253	regulation of histone H3-K36 trimethylation	biological_process
GO:2001254	negative regulation of histone H3-K36 trimethylation	biological_process
GO:2001255	positive regulation of histone H3-K36 trimethylation	biological_process
GO:2001256	regulation of store-operated calcium entry	biological_process
GO:2001257	regulation of cation channel activity	biological_process
GO:2001258	negative regulation of cation channel activity	biological_process
GO:2001259	positive regulation of cation channel activity	biological_process
GO:2001260	regulation of semaphorin-plexin signaling pathway	biological_process
GO:2001261	negative regulation of semaphorin-plexin signaling pathway	biological_process
GO:2001262	positive regulation of semaphorin-plexin signaling pathway	biological_process
GO:2001263	regulation of C-C chemokine binding	biological_process
GO:2001264	negative regulation of C-C chemokine binding	biological_process
GO:2001265	positive regulation of C-C chemokine binding	biological_process
GO:2001266	Roundabout signaling pathway involved in axon guidance	biological_process
GO:2001267	regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway	biological_process
GO:2001268	negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway	biological_process
GO:2001269	positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway	biological_process
GO:2001270	regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis	biological_process
GO:2001271	negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis	biological_process
GO:2001272	positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis	biological_process
GO:2001273	regulation of glucose import in response to insulin stimulus	biological_process
GO:2001274	negative regulation of glucose import in response to insulin stimulus	biological_process
GO:2001275	positive regulation of glucose import in response to insulin stimulus	biological_process
GO:2001276	regulation of leucine biosynthetic process	biological_process
GO:2001277	negative regulation of leucine biosynthetic process	biological_process
GO:2001278	positive regulation of leucine biosynthetic process	biological_process
GO:2001279	regulation of unsaturated fatty acid biosynthetic process	biological_process
GO:2001280	positive regulation of unsaturated fatty acid biosynthetic process	biological_process
GO:2001281	regulation of muscle cell chemotaxis toward tendon cell	biological_process
GO:2001282	negative regulation of muscle cell chemotaxis toward tendon cell	biological_process
GO:2001283	Roundabout signaling pathway involved in muscle cell chemotaxis toward tendon cell	biological_process
GO:2001284	regulation of BMP secretion	biological_process
GO:2001285	negative regulation of BMP secretion	biological_process
GO:2001286	regulation of caveolin-mediated endocytosis	biological_process
GO:2001287	negative regulation of caveolin-mediated endocytosis	biological_process
GO:2001288	positive regulation of caveolin-mediated endocytosis	biological_process


OBSOLETIONS
===========
GO:0036043, microspike (cellular_component)


TERM MERGES
===========

None


TERM CHANGES
============

KEY:  'A' : added, 'D' : deleted, 'C' : changed

Term ID	name	def	comment	subset	synonym	is_a	relationship	is_obsolete	replaced_by	
GO:0001669					1 A					
GO:0003948						1 D, 1 A				
GO:0005840					1 D					
GO:0005917	C	C			1 A	1 D, 1 A				
GO:0008417							1 A			
GO:0008418	C	C				1 D, 1 A				
GO:0008424							1 A			
GO:0010045	C	C								
GO:0010416	C	C								
GO:0010462						1 A				
GO:0015099	C	C								
GO:0015416	C									
GO:0015604	C									
GO:0015675	C	C								
GO:0015716	C									
GO:0015717					1 A					
GO:0015934						1 D, 1 A	1 D			
GO:0015935						1 D, 1 A	1 D			
GO:0016151	C	C								
GO:0018062						1 A				
GO:0018335		C				1 D, 1 A				
GO:0018931						1 D, 1 A				
GO:0018984						1 D, 1 A				
GO:0019634	C	C								
GO:0019700	C									
GO:0031392						1 D, 1 A				
GO:0031394						1 D, 1 A				
GO:0031585						1 D, 1 A				
GO:0031586						1 D, 1 A				
GO:0031587						1 D, 1 A				
GO:0031624						1 D, 1 A				
GO:0031625						1 D, 1 A				
GO:0032234						1 D, 1 A				
GO:0032235						1 D, 1 A				
GO:0032236						1 D, 1 A				
GO:0032923	C									
GO:0033134						1 D, 1 A				
GO:0034593						1 D, 1 A				
GO:0034594						1 D, 1 A				
GO:0034595		C				1 D, 1 A				
GO:0034596		C				1 D, 1 A				
GO:0035372						1 D, 1 A				
GO:0035444	C	C								
GO:0035602	C	C			1 A					
GO:0035784	C	C								
GO:0035853						1 D, 1 A				
GO:0036043		C	C			1 D		A	1 A	
GO:0042242				1 A		1 D, 1 A				
GO:0043635						1 A				
GO:0044084						1 D, 1 A	1 A			
GO:0044161						1 D, 1 A				
GO:0044163						1 D, 1 A				
GO:0044193						1 A				
GO:0044202						1 A				
GO:0044379						1 D, 1 A				
GO:0046922							1 A			
GO:0050417				1 A						
GO:0052744		C				1 D, 1 A				
GO:0052849	C									
GO:0052850	C	C			1 D, 1 A					
GO:0060314						1 D, 1 A				
GO:0060315						1 D, 1 A				
GO:0060316						1 D, 1 A				
GO:0070773	C	C		1 A						
GO:0071539						1 D, 1 A				
GO:0071839	C	C			1 A					
GO:0071865	C	C			1 A					
GO:0071866	C	C			1 A					
GO:0071988						1 D, 1 A				
GO:2000764						2 D, 1 A				
GO:2000888	C									
GO:2000921	C	C								
GO:2000922	C	C								
GO:2000923	C	C								
GO:2001115	C									
GO:2001116	C									
GO:2001118						1 D, 1 A				
GO:2001120						1 D, 1 A				



FILE STATS
==========

Term counts for the old and new files

Ontology	Old file	New file	Change
molecular function	9193	9201	+8
	(9193 defined)	(9201 defined)	
cellular component	2927	2938	+11
	(2927 defined)	(2938 defined)	
biological process	21664	21730	+66
	(21664 defined)	(21730 defined)	

Obsolete	1606	1609	+3
	(4.5% of total)	 (4.5% of total)	(+0.2%)

Totals	33784	33869	+88 (+0.2%)
	33784 (100.0%) defined	33869 (100.0%) defined	
	35390 inc. obs	35478 inc. obs