Gene Ontology: Ontology Comparison Report
Files used:
- file 1 (old): go-2011-11-12.obo; date: 08:11:2011 17:10; CVS revision: 1.2378
- file 2 (new): go-2011-11-19.obo; date: 18:11:2011 17:55; CVS revision: 1.2388
New terms
| ID | name | namespace |
|---|---|---|
| GO:0038046 | enkephalin receptor activity | molecular_function |
| GO:0038047 | morphine receptor activity | molecular_function |
| GO:0038048 | dynorphin receptor activity | molecular_function |
| GO:0072693 | protein targeting to prospore membrane | biological_process |
| GO:0097184 | response to azide | biological_process |
| GO:0097185 | cellular response to azide | biological_process |
| GO:2001227 | quercitrin binding | molecular_function |
Obsoletions
| ID | name | namespace |
|---|---|---|
| GO:0001619 | lysosphingolipid and lysophosphatidic acid receptor activity
Consider: GO:0038036, GO:0070915 |
molecular_function |
| GO:0004986 | delta-opioid receptor activity
Consider: GO:0038046 This term was made obsolete because the receptor is defined based on its pharmacological properties. |
molecular_function |
| GO:0004987 | kappa-opioid receptor activity
Consider: GO:0038048 This term was made obsolete because the receptor is defined based on its pharmacological properties. |
molecular_function |
| GO:0004988 | mu-opioid receptor activity
Consider: GO:0004979, GO:0038046, GO:0038047 This term was made obsolete because the receptor is defined based on its pharmacological properties. |
molecular_function |
| GO:0015051 | X-opioid receptor activity
Consider: GO:0001626 This term was made obsolete because the receptor is defined based on its pharmacological properties. |
molecular_function |
| GO:0045233 | natural killer cell receptor activity
Consider: GO:0002769, GO:0004888, GO:0030101 This term was made obsolete because the receptor is defined based on its cellular expression pattern, and the definition is inaccurate: receptors on natural killer cells can either activate or inhibit natural killer (NK) cell-mediated cytotoxicity. |
molecular_function |
Term merges
None
Term changes
| File 1 (08:11:2011 17:10, 1.2378) | File 2 (18:11:2011 17:55, 1.2388) |
|---|
| GO:0000755 : cytogamy | |
|---|---|
|
synonym |
synonym "zygote formation" RELATED [] |
| GO:0000916 : contractile ring contraction involved in cell cycle cytokinesis | |
|---|---|
|
synonym |
synonym "contractile ring constriction" BROAD [GOC:ascb_2009, GOC:dph, GOC:tb] "cytokinesis, contractile ring contraction" BROAD [GOC:dph, GOC:tb] |
| GO:0001071 : nucleic acid binding transcription factor activity | |
|---|---|
|
relationship part_of GO:2001141 | |
| GO:0001586 : Gi/o-coupled serotonin receptor activity | |
|---|---|
|
name def |
name Gi/o-coupled serotonin receptor activity def Combining with serotonin and transmitting the signal across the membrane by activation of the Gi/o subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gi/o subunit subsequently inhibits adenylate cyclase and results in a decrease in cyclic AMP (cAMP) levels. synonym "5-HT1 receptor activity" EXACT [GOC:bf] "serotonin receptor activity, coupled via Gi/o" EXACT [GOC:bf] |
| GO:0001587 : Gq/11-coupled serotonin receptor activity | |
|---|---|
|
name def |
name Gq/11-coupled serotonin receptor activity def Combining with serotonin and transmitting the signal across the membrane by activation of the Gq/11 subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gq/11 subunit subsequently activates phospholipase C and results in an increase in inositol triphosphate (IP3) levels. synonym "5-HT2 receptor activity" BROAD [GOC:bf] "serotonin receptor activity, coupled via Gq/11" EXACT [GOC:bf] |
| GO:0001619 : lysosphingolipid and lysophosphatidic acid receptor activity | |
|---|---|
|
is_a |
is_obsolete true consider GO:0038036 GO:0070915 |
| GO:0001626 : nociceptin receptor activity | |
|---|---|
|
name def is_a |
name nociceptin receptor activity def Combining with the peptide nociceptin, and transmitting the signal across the membrane by activating an associated G-protein. synonym "nociceptin/orphanin-FQ receptor activity" EXACT [GOC:bf] "OFQ receptor activity" EXACT [PR:000012940] "orphanin-FQ receptor activity" EXACT [GOC:bf] "X-opioid receptor activity" RELATED [GOC:bf] is_a GO:0004985 |
| GO:0004953 : icosanoid receptor activity | |
|---|---|
|
relationship has_part GO:0050542 | |
| GO:0004969 : histamine receptor activity | |
|---|---|
|
relationship has_part GO:0051381 | |
| GO:0004979 : beta-endorphin receptor activity | |
|---|---|
|
def |
def Combining with beta-endorphin, and transmitting the signal across the membrane by activating an associated G-protein. Beta-endorphin is a peptide, 31 amino acids long, resulting from processing of the precursor proopiomelanocortin (POMC). synonym "mu-opioid receptor activity" RELATED [GOC:bf] is_a GO:0004985 relationship has_part GO:0031626 |
| GO:0004985 : opioid receptor activity | |
|---|---|
|
def |
def Combining with an opioid (any narcotic derived from or resembling opium), and transmitting the signal across the membrane by activating an associated G-protein. |
| GO:0004986 : delta-opioid receptor activity | |
|---|---|
|
def is_a |
def OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of delta-opioid receptors, including the activity of enkephalins as ligands. comment This term was made obsolete because the receptor is defined based on its pharmacological properties. is_obsolete true consider GO:0038046 |
| GO:0004987 : kappa-opioid receptor activity | |
|---|---|
|
def is_a |
def OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of kappa-opioid receptors, including high affinity for dynorphins. comment This term was made obsolete because the receptor is defined based on its pharmacological properties. is_obsolete true consider GO:0038048 |
| GO:0004988 : mu-opioid receptor activity | |
|---|---|
|
def is_a |
def OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of mu-opioid receptors, including high affinity for enkephalins and beta-endorphin but low affinity for dynorphins. comment This term was made obsolete because the receptor is defined based on its pharmacological properties. is_obsolete true consider GO:0004979 GO:0038046 GO:0038047 |
| GO:0004993 : serotonin receptor activity | |
|---|---|
|
def |
def Combining with the biogenic amine serotonin and transmitting the signal across the membrane by activating an associated G-protein. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates. relationship has_part GO:0051378 |
| GO:0004995 : tachykinin receptor activity | |
|---|---|
|
def |
def Combining with a tachykinin neuropeptide and transmitting the signal across the membrane by activating an associated G-protein. |
| GO:0005055 : laminin receptor activity | |
|---|---|
|
relationship has_part GO:0043236 | |
| GO:0005220 : inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity | |
|---|---|
|
relationship has_part GO:0070679 | |
| GO:0006351 : transcription, DNA-dependent | |
|---|---|
|
synonym "transcription regulator activity" RELATED [] | |
| GO:0006352 : transcription initiation, DNA-dependent | |
|---|---|
|
synonym "transcription initiation factor activity" RELATED [] | |
| GO:0006353 : transcription termination, DNA-dependent | |
|---|---|
|
synonym "transcription termination factor activity" RELATED [] | |
| GO:0006360 : transcription from RNA polymerase I promoter | |
|---|---|
|
synonym "RNA polymerase I transcription factor activity" RELATED [] | |
| GO:0006362 : transcription elongation from RNA polymerase I promoter | |
|---|---|
|
synonym "RNA polymerase I transcription elongation factor activity" RELATED [] | |
| GO:0006363 : termination of RNA polymerase I transcription | |
|---|---|
|
synonym "RNA polymerase I transcription termination factor activity" RELATED [] | |
| GO:0006366 : transcription from RNA polymerase II promoter | |
|---|---|
|
synonym "RNA polymerase II transcription factor activity" RELATED [] | |
| GO:0006368 : transcription elongation from RNA polymerase II promoter | |
|---|---|
|
synonym "RNA polymerase II transcription elongation factor activity" RELATED [] | |
| GO:0006369 : termination of RNA polymerase II transcription | |
|---|---|
|
synonym "RNA polymerase II transcription termination factor activity" RELATED [] | |
| GO:0006383 : transcription from RNA polymerase III promoter | |
|---|---|
|
synonym "RNA polymerase III transcription factor activity" RELATED [] | |
| GO:0006385 : transcription elongation from RNA polymerase III promoter | |
|---|---|
|
synonym "RNA polymerase III transcription elongation factor activity" RELATED [] | |
| GO:0006386 : termination of RNA polymerase III transcription | |
|---|---|
|
synonym "RNA polymerase III transcription termination factor activity" RELATED [] | |
| GO:0007338 : single fertilization | |
|---|---|
|
synonym |
synonym "zygote biosynthesis" RELATED [] "zygote formation" RELATED [] |
| GO:0008158 : hedgehog receptor activity | |
|---|---|
|
def |
def Combining with a member of the hedgehog protein family and transmitting the signal across the membrane to initiate a change in cell activity. |
| GO:0015051 : X-opioid receptor activity | |
|---|---|
|
def is_a |
def OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of X-opioid receptors. comment This term was made obsolete because the receptor is defined based on its pharmacological properties. is_obsolete true consider GO:0001626 |
| GO:0016708 : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor | |
|---|---|
|
def |
def Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and two atoms of oxygen are incorporated into one donor. |
| GO:0021724 : inferior raphe nucleus development | |
|---|---|
|
synonym "inferior central nucleus development" BROAD [] "posterior raphe nucleus development" BROAD [] | |
| GO:0021725 : superior raphe nucleus development | |
|---|---|
|
synonym "anterior raphe nucleus development" BROAD [] "superior central nucleus development" BROAD [] | |
| GO:0031554 : regulation of transcription termination, DNA-dependent | |
|---|---|
|
synonym "transcription antiterminator activity" RELATED [] | |
| GO:0032784 : regulation of transcription elongation, DNA-dependent | |
|---|---|
|
synonym "transcription elongation regulator activity" RELATED [] | |
| GO:0032785 : negative regulation of transcription elongation, DNA-dependent | |
|---|---|
|
synonym "negative transcription elongation regulator activity" RELATED [] | |
| GO:0032786 : positive regulation of transcription elongation, DNA-dependent | |
|---|---|
|
synonym "positive transcription elongation regulator activity" RELATED [] | |
| GO:0045233 : natural killer cell receptor activity | |
|---|---|
|
def is_a |
def OBSOLETE. A receptor found on the surface of natural killer cells which binds Class I MHC antigens and is required for activation of NK activity. It belongs to the Ly49i family. comment This term was made obsolete because the receptor is defined based on its cellular expression pattern, and the definition is inaccurate: receptors on natural killer cells can either activate or inhibit natural killer (NK) cell-mediated cytotoxicity. is_obsolete true consider GO:0002769 GO:0004888 GO:0030101 |
| GO:0045892 : negative regulation of transcription, DNA-dependent | |
|---|---|
|
synonym "transcription repressor activity" RELATED [] | |
| GO:0045893 : positive regulation of transcription, DNA-dependent | |
|---|---|
|
synonym "transcription activator activity" RELATED [] | |
| GO:0055119 : relaxation of cardiac muscle | |
|---|---|
|
is_a |
|
| GO:0071555 : cell wall organization | |
|---|---|
|
is_a GO:0016043 | |
| GO:0072661 : protein targeting to plasma membrane | |
|---|---|
|
is_a |
is_a GO:0006612 |
File Stats
| Ontology | Old file | New file | Change |
|---|---|---|---|
| molecular function |
9142 9142 (100.0%) defined |
9140 9140 (100.0%) defined |
-2 |
| cellular component |
2922 2922 (100.0%) defined |
2922 2922 (100.0%) defined |
0 |
| biological process |
21588 21588 (100.0%) defined |
21591 21591 (100.0%) defined |
+3 |
| Obsolete | 1597 (4.5% of total) |
1603 (4.5% of total) |
+6 (+0.4%) |
| Totals |
33652 33652 (100.0%) defined 35249 inc. obsoletes |
33653 33653 (100.0%) defined 35256 inc. obsoletes |
+7 (0.0%) |