Gene Ontology Ontology Comparison Report ========================== Files used: - file 1 (old): go-2011-09-24.obo; date: 23:09:2011 13:54; CVS revision: 1.2279 - file 2 (new): go-2011-10-01.obo; date: 30:09:2011 14:21; CVS revision: 1.2291 NEW TERMS ========= ID name namespace GO:0002196 Ser-tRNA(Ala) hydrolase activity molecular_function GO:0097161 DH domain binding molecular_function GO:0097162 MADS box domain binding molecular_function GO:0097163 sulfur carrier activity molecular_function GO:0097164 ammonium ion metabolic process biological_process GO:0097165 nuclear stress granule cellular_component GO:0097166 lens epithelial cell proliferation biological_process GO:0097167 circadian regulation of translation biological_process GO:0097168 mesenchymal stem cell proliferation biological_process GO:2001106 regulation of Rho guanyl-nucleotide exchange factor activity biological_process GO:2001107 negative regulation of Rho guanyl-nucleotide exchange factor activity biological_process GO:2001108 positive regulation of Rho guanyl-nucleotide exchange factor activity biological_process OBSOLETIONS =========== None TERM MERGES =========== None TERM CHANGES ============ GO:0005267 : potassium channel activity + is_a: GO:0015079 GO:0006139 : nucleobase-containing compound metabolic process + synonym: "nucleobase, nucleoside and nucleotide metabolic process" RELATED [] GO:0006366 : transcription from RNA polymerase II promoter + subset: goslim_pombe GO:0010494 : cytoplasmic stress granule - name: stress granule + name: cytoplasmic stress granule + synonym: "P-body" NARROW [] + synonym: "cytoplasmic mRNP granule" EXACT [] + synonym: "stress granule" EXACT [] GO:0035770 : ribonucleoprotein granule - name: RNA granule + name: ribonucleoprotein granule + synonym: "RNA granule" NARROW [] + synonym: "RNP granule" EXACT [] + synonym: "mRNP granule" EXACT [] GO:0045039 : protein import into mitochondrial inner membrane - def: The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known. + def: The process comprising the import of proteins into the mitochondrion from outside the organelle and their insertion into the mitochondrial inner membrane. The translocase of the outer membrane complex mediates the passage of these proteins across the outer membrane, after which they are guided by either of two inner membrane translocase complexes into their final destination in the inner membrane. GO:0045040 : protein import into mitochondrial outer membrane - def: The import of proteins into the outer membrane of the mitochondrion. Outer membrane proteins have a short matrix-targeting sequence followed by a long stretch of hydrophobic amino acids at the N-terminus. The hydrophobic sequence functions as a stop-transfer sequence that both prevents transfer of the protein into the matrix and anchors it as an integral protein in the outer membrane. + def: The process comprising the insertion of proteins from outside the organelle into the mitochondrial outer membrane, mediated by large outer membrane translocase complexes. + synonym: "protein insertion into mitochondrial outer membrane" EXACT [] GO:0055086 : nucleobase-containing small molecule metabolic process + synonym: "nucleobase, nucleoside and nucleotide metabolic process" RELATED [] GO:0071598 : neuronal ribonucleoprotein granule - name: neuronal RNA granule + name: neuronal ribonucleoprotein granule + synonym: "neuronal RNA granule" NARROW [] + synonym: "neuronal RNP granule" EXACT [] GO:0072090 : mesenchymal stem cell proliferation involved in nephron morphogenesis - is_a: GO:0072089 + is_a: GO:0097168 FILE STATS ========== Term counts for the old and new files Ontology Old file New file Change molecular function 9103 9107 +4 (9103 defined) (9107 defined) cellular component 2897 2898 +1 (2897 defined) (2898 defined) biological process 21432 21439 +7 (21432 defined) (21439 defined) Obsolete 1585 1585 0 (4.5% of total) (4.5% of total) (0.0%) Totals 33432 33444 +12 (0.0%) 33432 (100.0%) defined 33444 (100.0%) defined 35017 inc. obs 35029 inc. obs