Ontology Comparison Report

Files used:

New terms

ID name namespace
GO:0002185 creatine kinase complex cellular_component
GO:0002186 cytosolic creatine kinase complex cellular_component
GO:0002187 mitochondrial creatine kinase complex cellular_component
GO:0035888 isoguanine deaminase activity molecular_function
GO:0035889 otolith tethering biological_process
GO:0035890 exit from host biological_process
GO:0035891 exit from host cell biological_process
GO:0035892 modulation of platelet aggregation in other organism biological_process
GO:0035893 negative regulation of platelet aggregation in other organism biological_process
GO:0035894 positive regulation of platelet aggregation in other organism biological_process
GO:0035895 modulation of mast cell degranulation in other organism biological_process
GO:0035896 positive regulation of mast cell degranulation in other organism biological_process
GO:0035897 proteolysis in other organism biological_process
GO:0039510 suppression by virus of host ATP-dependent RNA helicase activity biological_process
GO:0039511 suppression by virus of host interferon receptor activity biological_process
GO:0039512 suppression by virus of host protein tyrosine kinase activity biological_process
GO:0039513 suppression by virus of host catalytic activity biological_process
GO:0039514 suppression by virus of host JAK-STAT cascade biological_process
GO:0039515 suppression by virus of tyrosine phosphorylation of host STAT protein biological_process
GO:0039516 modulation by virus of host catalytic activity biological_process
GO:0039517 modulation by virus of host protein serine/threonine phosphatase activity biological_process
GO:0052694 jasmonoyl-isoleucine-12-hydroxylase activity molecular_function
GO:0097066 response to thyroid hormone stimulus biological_process
GO:0097067 cellular response to thyroid hormone stimulus biological_process
GO:0097068 response to thyroxine stimulus biological_process
GO:0097069 cellular response to thyroxine stimulus biological_process
GO:0097070 ductus arteriosus closure biological_process
GO:0097071 interferon regulatory factor complex cellular_component
GO:0097072 interferon regulatory factor 3 complex cellular_component
GO:0097073 interferon regulatory factor 5 complex cellular_component
GO:0097074 interferon regulatory factor 7 complex cellular_component
GO:0097075 interferon regulatory factor 3-interferon regulatory factor 7 complex cellular_component
GO:0097076 transforming growth factor beta activated kinase 1 complex cellular_component
GO:0097077 copper ion sensor activity molecular_function
GO:0097078 FAl1-SGD1 complex cellular_component
GO:0097079 selenite:hydrogen symporter activity molecular_function
GO:0097080 plasma membrane selenite transport biological_process
GO:2000721 positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation biological_process
GO:2000722 regulation of cardiac vascular smooth muscle cell differentiation biological_process
GO:2000723 negative regulation of cardiac vascular smooth muscle cell differentiation biological_process
GO:2000724 positive regulation of cardiac vascular smooth muscle cell differentiation biological_process
GO:2000725 regulation of cardiac muscle cell differentiation biological_process
GO:2000726 negative regulation of cardiac muscle cell differentiation biological_process
GO:2000727 positive regulation of cardiac muscle cell differentiation biological_process
GO:2000728 regulation of mRNA export from nucleus in response to heat stress biological_process
GO:2000729 positive regulation of mesenchymal cell proliferation involved in ureter development biological_process
GO:2000730 regulation of termination of RNA polymerase I transcription biological_process
GO:2000731 negative regulation of termination of RNA polymerase I transcription biological_process
GO:2000732 positive regulation of termination of RNA polymerase I transcription biological_process
GO:2000733 regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation biological_process
GO:2000734 negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation biological_process
GO:2000735 positive regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation biological_process
GO:2000736 regulation of stem cell differentiation biological_process
GO:2000737 negative regulation of stem cell differentiation biological_process
GO:2000738 positive regulation of stem cell differentiation biological_process
GO:2000739 regulation of mesenchymal stem cell differentiation biological_process
GO:2000740 negative regulation of mesenchymal stem cell differentiation biological_process
GO:2000741 positive regulation of mesenchymal stem cell differentiation biological_process
GO:2000742 regulation of anterior head development biological_process
GO:2000743 negative regulation of anterior head development biological_process
GO:2000744 positive regulation of anterior head development biological_process
GO:2000745 positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation biological_process
GO:2000746 regulation of defecation rhythm biological_process
GO:2000747 negative regulation of defecation rhythm biological_process
GO:2000748 positive regulation of defecation rhythm biological_process
GO:2000749 positive regulation of chromatin silencing at rDNA biological_process
GO:2000750 negative regulation of establishment or maintenance of bipolar cell polarity regulating cell shape biological_process
GO:2000751 histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore biological_process
GO:2000752 regulation of glucosylceramide catabolic process biological_process
GO:2000753 positive regulation of glucosylceramide catabolic process biological_process
GO:2000754 regulation of sphingomyelin catabolic process biological_process
GO:2000755 positive regulation of sphingomyelin catabolic process biological_process
GO:2000756 regulation of peptidyl-lysine acetylation biological_process
GO:2000757 negative regulation of peptidyl-lysine acetylation biological_process
GO:2000758 positive regulation of peptidyl-lysine acetylation biological_process
GO:2000759 regulation of N-terminal peptidyl-lysine acetylation biological_process
GO:2000760 negative regulation of N-terminal peptidyl-lysine acetylation biological_process
GO:2000761 positive regulation of N-terminal peptidyl-lysine acetylation biological_process
GO:2000762 regulation of phenylpropanoid metabolic process biological_process

Obsoletions

None

Term merges

None

Term changes

Changes in term-related data
File 1 (10:06:2011 13:58, 1.2028) File 2 (17:06:2011 13:42, 1.2042)
GO:0003337 : mesenchymal to epithelial transition involved in metanephros morphogenesis
GO:0003338 : metanephros morphogenesis
GO:0003340 : negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis
GO:0003904 : deoxyribodipyrimidine photo-lyase activity
synonym
"CPD photolyase activity" EXACT [PMID:16302973]
GO:0006096 : glycolysis
def
The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle.
 def
The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Glycolysis begins with phosphorylation of a monosaccharide (generally glucose) on the sixth carbon by a hexokinase, and ends with the production of pyruvate. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle.
GO:0009962 : regulation of flavonoid biosynthetic process
is_a
GO:0043455
 is_a
GO:2000762
GO:0031537 : regulation of anthocyanin metabolic process
is_a
GO:0031323
GO:0043455
 is_a
GO:2000762
GO:0035065 : regulation of histone acetylation
is_a
GO:2000756
GO:0035066 : positive regulation of histone acetylation
is_a
GO:2000758
GO:0035067 : negative regulation of histone acetylation
is_a
GO:2000757
GO:0035790 : platelet-derived growth factor receptor-alpha signaling pathway
GO:0035791 : platelet-derived growth factor receptor-beta signaling pathway
GO:0035803 : egg coat formation
GO:0035806 : modulation of blood coagulation in other organism
name
modulation by organism of blood coagulation in other organism
synonym
"modulation of blood coagulation in other organism" EXACT [GOC:bf]
 name
modulation of blood coagulation in other organism
synonym
"modulation by organism of blood coagulation in other organism" EXACT [GOC:bf]
GO:0035807 : positive regulation of blood coagulation in other organism
name
positive regulation by organism of blood coagulation in other organism
synonym
"positive regulation of blood coagulation in other organism" EXACT [GOC:bf]
 name
positive regulation of blood coagulation in other organism
synonym
"positive regulation by organism of blood coagulation in other organism" EXACT [GOC:bf]
GO:0039507 : suppression by virus of host molecular function
synonym
"inhibition by virus of host protein function" EXACT [GOC:bf]
"inhibition of host protein function" BROAD [GOC:bf]
 synonym
"inhibition by virus of host protein function" NARROW [GOC:bf]
"inhibition of host protein function" NARROW [GOC:bf]
GO:0039508 : suppression by virus of host receptor activity
synonym
"inhibition by virus of host receptor activity" EXACT [GOC:bf]
 synonym
"inhibition by virus of host receptor activity" NARROW [GOC:bf]
GO:0039509 : suppression by virus of host pattern recognition receptor activity
synonym
"inhibition by virus of host pattern recognition receptor activity" EXACT [GOC:rf]
"viral inhibition of host pattern recognition receptor activity" EXACT [GOC:bf]
 synonym
"inhibition by virus of host pattern recognition receptor activity" NARROW [GOC:rf]
"viral inhibition of host pattern recognition receptor activity" NARROW [GOC:bf]
GO:0043153 : entrainment of circadian clock by photoperiod
synonym
"photoentrainment of circadian clock" EXACT [PMID:10217146]
GO:0044323 : retinoic acid-responsive element binding
GO:0044342 : type B pancreatic cell proliferation
GO:0044343 : canonical Wnt receptor signaling pathway involved in regulation of type B pancreatic cell proliferation
GO:0044344 : cellular response to fibroblast growth factor stimulus
GO:0044345 : stromal-epithelial cell signaling involved in prostate gland development
GO:0044346 : fibroblast apoptosis
GO:0052055 : modulation by symbiont of host molecular function
is_a
GO:0052046
 is_a
GO:0044003
GO:0052214 : metabolism of substance in other organism involved in symbiotic interaction
is_a
GO:0051817
 relationship
part_of GO:0044403
GO:0052428 : modification by host of symbiont molecular function
is_a
GO:0052182
 is_a
GO:0051851
GO:0061029 : eyelid development in camera-type eye
GO:0061030 : epithelial cell differentiation involved in mammary gland alveolus development
GO:0061031 : endodermal digestive tract morphogenesis
GO:0061032 : visceral serous pericardium development
GO:0061046 : regulation of branching involved in lung morphogenesis
GO:0061047 : positive regulation of branching involved in lung morphogenesis
GO:0061048 : negative regulation of branching involved in lung morphogenesis
GO:0061150 : renal system segmentation
GO:0061151 : BMP signaling pathway involved in renal system segmentation
GO:0061152 : trachea submucosa development
GO:0061154 : endothelial tube morphogenesis
GO:0061155 : pulmonary artery endothelial tube morphogenesis
GO:0061156 : pulmonary artery morphogenesis
GO:0061180 : mammary gland epithelium development
GO:0061205 : paramesonephric duct development
GO:0061351 : neural precursor cell proliferation
GO:0061370 : testosterone biosynthetic process
GO:0061373 : mammillary axonal complex development
GO:0061374 : mammillothalamic axonal tract development
GO:0061375 : mammillotectal axonal tract development
GO:0061376 : mammillotegmental axonal tract development
GO:0061377 : mammary gland lobule development
GO:0061378 : corpora quadrigemina development
GO:0061379 : inferior colliculus development
GO:0061380 : superior colliculus development
GO:0070040 : rRNA (adenine-C2-)-methyltransferase activity
def
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing C2-methyladenine.
 def
Catalysis of the reaction: 2 S-adenosyl-L-methionine + adenine(2503) in 23S rRNA = S-adenosyl-L-homocysteine + 5'-deoxyadenosine + L-methionine + rRNA containing C2-methyladenine(2503) in 23S rRNA.
xref
EC:2.1.1.192
MetaCyc:RXN-11586
GO:0070633 : transepithelial transport
GO:0070835 : chromium ion transmembrane transporter activity
GO:0070890 : sodium-dependent L-ascorbate transmembrane transporter activity
GO:0071104 : response to interleukin-9
GO:0071105 : response to interleukin-11
GO:0071107 : response to parathyroid hormone stimulus
GO:0071503 : response to heparin
GO:0071504 : cellular response to heparin
GO:0071505 : response to mycophenolic acid
GO:0071506 : cellular response to mycophenolic acid
GO:0071680 : response to indole-3-methanol
GO:0071681 : cellular response to indole-3-methanol
GO:0071731 : response to nitric oxide
GO:0071732 : cellular response to nitric oxide
GO:0071772 : response to BMP stimulus
GO:0071773 : cellular response to BMP stimulus
GO:0071837 : HMG box domain binding
GO:0071838 : cell proliferation in bone marrow
GO:0071863 : regulation of cell proliferation in bone marrow
GO:0071864 : positive regulation of cell proliferation in bone marrow
GO:0071865 : regulation of apoptosis in bone marrow
GO:0071866 : negative regulation of apoptosis in bone marrow
GO:0085018 : maintenance of symbiont-containing vacuole via substance secreted by host
GO:0090094 : metanephric cap mesenchymal cell proliferation involved in metanephros development
GO:0090095 : regulation of metanephric cap mesenchymal cell proliferation
GO:0090096 : positive regulation of metanephric cap mesenchymal cell proliferation
GO:0090183 : regulation of kidney development
GO:0090184 : positive regulation of kidney development
GO:0090185 : negative regulation of kidney development
GO:0090189 : regulation of branching involved in ureteric bud morphogenesis
GO:0090190 : positive regulation of branching involved in ureteric bud morphogenesis
GO:0090191 : negative regulation of branching involved in ureteric bud morphogenesis
GO:0090192 : regulation of glomerulus development
GO:0090193 : positive regulation of glomerulus development
GO:0090194 : negative regulation of glomerulus development
GO:0090259 : regulation of retinal ganglion cell axon guidance
GO:0090260 : negative regulation of retinal ganglion cell axon guidance
GO:0090370 : negative regulation of cholesterol efflux
GO:2000004 : regulation of metanephric S-shaped body morphogenesis
GO:2000005 : negative regulation of metanephric S-shaped body morphogenesis
GO:2000006 : regulation of metanephric comma-shaped body morphogenesis
GO:2000007 : negative regulation of metanephric comma-shaped body morphogenesis
GO:2000018 : regulation of male gonad development
GO:2000019 : negative regulation of male gonad development
GO:2000050 : regulation of non-canonical Wnt receptor signaling pathway
GO:2000051 : negative regulation of non-canonical Wnt receptor signaling pathway
GO:2000052 : positive regulation of non-canonical Wnt receptor signaling pathway
GO:2000053 : regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification
GO:2000054 : negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification
GO:2000061 : regulation of ureter smooth muscle cell differentiation
GO:2000062 : negative regulation of ureter smooth muscle cell differentiation
GO:2000063 : positive regulation of ureter smooth muscle cell differentiation
GO:2000064 : regulation of cortisol biosynthetic process
GO:2000065 : negative regulation of cortisol biosynthetic process
GO:2000066 : positive regulation of cortisol biosynthetic process
GO:2000074 : regulation of type B pancreatic cell development
GO:2000077 : negative regulation of type B pancreatic cell development
GO:2000078 : positive regulation of type B pancreatic cell development
GO:2000079 : regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation
GO:2000080 : negative regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation
GO:2000081 : positive regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation
GO:2000116 : regulation of cysteine-type endopeptidase activity
GO:2000117 : negative regulation of cysteine-type endopeptidase activity
GO:2000177 : regulation of neural precursor cell proliferation
GO:2000178 : negative regulation of neural precursor cell proliferation
GO:2000179 : positive regulation of neural precursor cell proliferation
GO:2000180 : negative regulation of androgen biosynthetic process
GO:2000181 : negative regulation of blood vessel morphogenesis
GO:2000224 : regulation of testosterone biosynthetic process
GO:2000225 : negative regulation of testosterone biosynthetic process
GO:2000269 : regulation of fibroblast apoptosis
GO:2000270 : negative regulation of fibroblast apoptosis
GO:2000271 : positive regulation of fibroblast apoptosis
GO:2000505 : regulation of energy homeostasis
GO:2000506 : negative regulation of energy homeostasis
GO:2000507 : positive regulation of energy homeostasis
GO:2000532 : regulation of renal albumin absorption
GO:2000533 : negative regulation of renal albumin absorption
GO:2000534 : positive regulation of renal albumin absorption
GO:2000584 : negative regulation of platelet-derived growth factor receptor-alpha signaling pathway
GO:2000591 : positive regulation of metanephric mesenchymal cell migration
GO:2000701 : glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation

File Stats

Term counts for the old and new files
Ontology Old file New file Change
molecular function 9019
9019 (100.0%) defined 		9023
9023 (100.0%) defined 		+4
cellular component 2844
2844 (100.0%) defined 		2854
2854 (100.0%) defined 		+10
biological process 20831
20831 (100.0%) defined 		20896
20896 (100.0%) defined 		+65
Obsolete 1559
(4.6% of total)		 1559
(4.5% of total)		 0 (0.0%)
Totals 32694
32694 (100.0%) defined
34253 inc. obsoletes 		32773
32773 (100.0%) defined
34332 inc. obsoletes 		+79 (+0.2%)