# HISTORY 23 May 2016: Saved by krc using Paint 2.0-beta19 # molecular_function 20160523: cellular organisms_PTN000443727 has function ATP binding (GO:0005524) 20160523: cellular organisms_PTN000443727 has function ribosomal small subunit binding (GO:0043024) 20160523: cellular organisms_PTN000443727 has function iron ion binding (GO:0005506) # cellular_component 20160523: cellular organisms_PTN000443727 co-localizes with eukaryotic translation initiation factor 3 complex (GO:0005852) # biological_process 20160523: cellular organisms_PTN000443727 participates in translational initiation (GO:0006413) 20160523: cellular organisms_PTN000443727 participates in translational termination (GO:0006415) 20160523: cellular organisms_PTN000443727 participates in ribosomal subunit export from nucleus (GO:0000054) # PRUNED 23 May 2016: node_PTN001829780 has been pruned from tree # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES 9ZZZZ:PTN001829779 - root (diamond) node - 9ZZZZ:PTN001829780 - (diamond node) -- whole branch is quite diverged from the rest of the tree, including the Archaeal sequences of the other main branch => PRUNED -- these sequence may belong together even though most are plant sequences with one bacterial (Synechocystis) sequence -- consider if plant sequences are plastid - PTN000443727 -- 9ARCH:PTN000443801 - Archaea -- 9EUKA:PTN000443728 - Eukaryotes # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).