GO Monthly Release Notes for October 2003 ======================== Generated on Fri Nov 7 11:36:47 2003 Files used: component old: 2.399 new: 2.411 function old: 2.860 new: 2.893 process old: 2.953 new: 2.1000 definitions old: 2.1417 new: 2.1483 GO Slim: Generic.0208 Key: |----1----||----2-----||-3--||4||----5----||-----------6-----------| GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope (obs) 1. GO ID number 2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete. Terms with more than one GO-slim parent have further parents listed underneath the first parent. 3. Database that added term 4. indicates the existence of a definition for the term 5. the sourceforge request ID the term was added in response to 6. term name Columns are tab-delimited and can be imported into Excel for ease of reading. New terms in component ontology (10 new terms) GO:0010168 GO:0005737 TAIR D 829247 ER body GO:0010169 GO:0005737 TAIR D 829247 myrosinase complex GO:0035030 GO:0005829 FB D 796593 phosphoinositide 3-kinase complex, class IA GO:0035031 GO:0005829 FB D 796593 phosphoinositide 3-kinase complex, class IB GO:0035032 GO:0005829 FB D 796593 phosphoinositide 3-kinase complex, class III GO:0042995 GO:0005623 JL D 796597 cell projection GO:0043005 GO:0005623 JL D 796597 neuronal cell projection GO:0043020 GO:0005623 JL D 819849 NADPH oxidase complex GO:0005886 GO:0043025 GO:0005623 JL D 782690 cell body GO:0048269 GO:0005622 JIC D 824827 methionine adenosyltransferase complex Term name changes in component ontology GO:0005942: 1-phosphatidylinositol 3-kinase complex --> phosphoinositide 3-kinase complex New definitions for component ontology terms (2 new definitions) GO:0005845, mRNA cap complex GO:0005942, phosphoinositide 3-kinase complex Term movements in component ontology: Terms movements under GO Slim term 'intracellular ; GO:0005622' + GO:0005845, mRNA cap complex Terms movements under GO Slim term 'cytoplasm ; GO:0005737' - GO:0005845, mRNA cap complex New terms in function ontology (55 new terms) GO:0035033 GO:0030234 FB D 816681 histone deacetylase regulator activity GO:0035034 GO:0030234 FB D 816681 histone acetyltransferase regulator activity GO:0035035 GO:0005515 FB D 816681 histone acetyltransferase binding GO:0035049 GO:0003824 FB D 824793 juvenile hormone acid methyltransferase activity GO:0042970 GO:0005215 JL D homoserine transporter activity GO:0042971 GO:0005215 JL D lactone transporter activity GO:0042972 GO:0003824 JL D 818809 licheninase activity GO:0042973 GO:0003824 JL D 818802 glucan endo-1,3-beta-D-glucosidase activity GO:0042974 GO:0005102 JL D 803125 retinoic acid receptor binding GO:0042975 GO:0005102 JL D 803125 peroxisome proliferator activated receptor binding GO:0042978 GO:0030234 JL D 810591 ornithine decarboxylase activator activity GO:0042979 GO:0030234 JL D 810591 ornithine decarboxylase regulator activity GO:0042980 GO:0005515 JL D 797250 CFTR binding GO:0042988 GO:0005515 JL D 795430 X11-like protein binding GO:0043008 GO:0005515 JL D 818546 ATP-dependent protein binding GO:0043014 GO:0008092 JL D 828219 alpha-tubulin binding GO:0043015 GO:0008092 JL D 828219 gamma-tubulin binding GO:0043021 GO:0005488 JL D 819239 ribonucleoprotein binding GO:0043022 GO:0005488 JL D 819239 ribosome binding GO:0043023 GO:0005488 JL D 819239 ribosomal large subunit binding GO:0043024 GO:0005488 JL D 819239 ribosomal small subunit binding GO:0043027 GO:0016329 JL D 833035 caspase inhibitor activity GO:0030234 GO:0043028 GO:0030234 JL D 833035 caspase regulator activity GO:0048270 GO:0030234 JIC D 824825 methionine adenosyltransferase regulator activity GO:0048273 GO:0005515 JIC D 824121 mitogen-activated protein kinase p38 binding GO:0050542 GO:0008289 AI D 811230 icosanoid binding GO:0050543 GO:0008289 AI D 811230 icosatetraenoic acid binding GO:0050544 GO:0008289 AI D 811230 arachidonic acid binding GO:0050646 GO:0008289 AI D 811230 5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding GO:0050647 GO:0008289 AI D 811230 5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding GO:0050648 GO:0008289 AI D 811230 5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding GO:0050649 GO:0003824 AI D 817121 testosterone 6-beta-hydroxylase activity GO:0050656 GO:0000166 AI D 819297 3'-phosphoadenosine 5'-phosphosulfate binding GO:0050659 GO:0003824 AI D 819250 N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity GO:0050660 GO:0005488 AI D 819849 FAD binding GO:0050661 GO:0005488 AI D 819849 NADPH binding GO:0050662 GO:0005488 AI D 819849 coenzyme binding GO:0050664 GO:0003824 AI D oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor GO:0050681 GO:0005102 AI D 811151 androgen receptor binding GO:0050682 GO:0005515 AI D 816622 AF-2 domain binding GO:0050683 GO:0005515 AI D 816622 AF-1 domain binding GO:0050692 GO:0005515 AI D 816622 DBD domain binding GO:0050693 GO:0005515 AI D 816622 LBD domain binding GO:0050694 GO:0003824 AI D 821239 galactose 3-O-sulfotransferase activity GO:0050695 GO:0003824 AI D 824973 benzoylformate decarboxylase activity GO:0050697 GO:0003824 AI D 825012 1,1,2-trichloroethylene reductive dehalogenase activity GO:0050698 GO:0003824 AI D proteoglycan sulfotransferase activity GO:0050699 GO:0005515 AI D 826751 WW domain binding GO:0050700 GO:0005515 AI D 824788 CARD domain binding GO:0050733 GO:0005515 AI D 830930 RS domain binding GO:0050734 GO:0003824 AI D hydroxycinnamoyltransferase activity GO:0050735 GO:0003824 AI D N-malonyltransferase activity GO:0050736 GO:0003824 AI D O-malonyltransferase activity GO:0050737 GO:0003824 AI D O-hydroxycinnamoyltransferase activity GO:0050738 GO:0003824 AI D fructosyltransferase activity New obsoletions in function ontology GO:0003719, transcription factor binding, cytoplasmic sequestering: sequestering is a process rather than a function. GO:0003788, actin monomer sequestering activity: sequestering is a process not an activity. GO:0008845, endonuclease VIII activity: represents a gene product. GO:0019000, endonuclease G activity: represents a gene product. Term name changes in function ontology GO:0001517: N-acetylglucosamine-6-O-sulfotransferase activity --> N-acetylglucosamine 6-O-sulfotransferase activity GO:0001537: N-acetylgalactosamine-4-O-sulfotransferase activity --> N-acetylgalactosamine 4-O-sulfotransferase activity GO:0004953: eicosanoid receptor activity --> icosanoid receptor activity GO:0008951: palmitoleoyl [acyl-carrier protein] (ACP)-dependent acyltransferase activity --> palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity GO:0018557: 1,2-dihydroxyfluorene 1,1a-dioxygenase activity --> 1,2-dihydroxyfluorene 1,1-alpha-dioxygenase activity GO:0018562: 3,4-dihydroxyfluorene 4,4a-dioxygenase activity --> 3,4-dihydroxyfluorene 4,4-alpha-dioxygenase activity GO:0018705: 1,2-dichloroethane reductive dehalogenase activity --> 1,2-dichloroethene reductive dehalogenase activity GO:0042959: alkanesulphonate transporter activity --> alkanesulfonate transporter activity New definitions for function ontology terms (16 new definitions) GO:0001537, N-acetylgalactosamine 4-O-sulfotransferase activity GO:0003719, transcription factor binding, cytoplasmic sequestering GO:0003788, actin monomer sequestering activity GO:0004115, cAMP-specific phosphodiesterase activity GO:0004116, cGMP-specific phosphodiesterase activity GO:0008073, ornithine decarboxylase inhibitor activity GO:0008388, testosterone 15-alpha-hydroxylase activity GO:0008390, testosterone 16-alpha-hydroxylase activity GO:0008638, protein tagging activity GO:0008845, endonuclease VIII activity GO:0015395, equilibrative nucleoside transporter activity GO:0016174, NADPH oxidase activity GO:0016175, superoxide-generating NADPH oxidase activity GO:0019000, endonuclease G activity GO:0042285, xylosyltransferase activity GO:0050645, limonoid glucosyltransferase activity New term merges in function ontology GO:0045440 has been merged into GO:0050640, isopenicillin-N N-acyltransferase activity Term movements in function ontology: Terms movements under GO Slim term 'nucleotide binding ; GO:0000166' - GO:0001730, 2'-5'-oligoadenylate synthetase activity - GO:0003924, GTPase activity - GO:0003925, small monomeric GTPase activity - GO:0003926, ARF small monomeric GTPase activity - GO:0003927, heterotrimeric G-protein GTPase activity - GO:0003928, RAB small monomeric GTPase activity - GO:0003929, RAN small monomeric GTPase activity - GO:0003930, RAS small monomeric GTPase activity - GO:0003931, Rho small monomeric GTPase activity - GO:0003932, SAR small monomeric GTPase activity - GO:0004003, ATP dependent DNA helicase activity - GO:0004004, ATP dependent RNA helicase activity - GO:0004008, copper-exporting ATPase activity - GO:0004009, ATP-binding cassette (ABC) transporter activity - GO:0004012, phospholipid-translocating ATPase activity - GO:0005085, guanyl-nucleotide exchange factor activity - GO:0005086, ARF guanyl-nucleotide exchange factor activity - GO:0005087, Ran guanyl-nucleotide exchange factor activity - GO:0005088, Ras guanyl-nucleotide exchange factor activity - GO:0005089, Rho guanyl-nucleotide exchange factor activity - GO:0005090, Sar guanyl-nucleotide exchange factor activity - GO:0005260, channel-conductance-controlling ATPase activity - GO:0005388, calcium-transporting ATPase activity - GO:0005391, sodium/potassium-exchanging ATPase activity - GO:0005395, eye pigment precursor transporter activity - GO:0005396, transmembrane conductance regulator activity - GO:0008026, ATP dependent helicase activity - GO:0008094, DNA dependent ATPase activity - GO:0008186, RNA dependent ATPase activity - GO:0008321, Ral guanyl-nucleotide exchange factor activity - GO:0008547, protein-synthesizing GTPase activity - GO:0008548, signal-recognition-particle GTPase activity - GO:0008549, dynamine GTPase activity - GO:0008550, tubulin GTPase activity - GO:0008551, cadmium-exporting ATPase activity - GO:0008552, zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity - GO:0008553, hydrogen-exporting ATPase activity, phosphorylative mechanism - GO:0008554, sodium-exporting ATPase activity, phosphorylative mechanism - GO:0008555, chloride-transporting ATPase activity - GO:0008556, potassium-transporting ATPase activity - GO:0008558, guanine-transporting ATPase activity - GO:0008559, xenobiotic-transporting ATPase activity - GO:0008560, steroid-transporting ATPase activity - GO:0008564, protein-secreting ATPase activity - GO:0008566, mitochondrial protein-transporting ATPase activity - GO:0008619, RHEB small monomeric GTPase activity - GO:0008722, DNA helicase IV activity - GO:0008900, hydrogen/potassium-exchanging ATPase activity - GO:0015406, ABC-type uptake permease activity - GO:0015407, monosaccharide-transporting ATPase activity - GO:0015408, ferric-transporting ATPase activity - GO:0015410, manganese-transporting ATPase activity - GO:0015411, taurine-transporting ATPase activity - GO:0015412, molybdate-transporting ATPase activity - GO:0015413, nickel-transporting ATPase activity - GO:0015414, nitrate-transporting ATPase activity - GO:0015415, phosphate-transporting ATPase activity - GO:0015416, phosphonate-transporting ATPase activity - GO:0015417, polyamine-transporting ATPase activity - GO:0015418, quaternary-amine-transporting ATPase activity - GO:0015419, sulfate-transporting ATPase activity - GO:0015420, vitamin B12-transporting ATPase activity - GO:0015421, oligopeptide-transporting ATPase activity - GO:0015422, oligosaccharide-transporting ATPase activity - GO:0015423, maltose-transporting ATPase activity - GO:0015424, amino acid-transporting ATPase activity - GO:0015425, nonpolar-amino acid-transporting ATPase activity - GO:0015426, polar-amino-acid-transporting ATPase activity - GO:0015427, ABC-type efflux porter activity - GO:0015428, type I protein secretor activity - GO:0015430, glycerol-3-phosphate-transporting ATPase activity - GO:0015431, conjugate transporter activity - GO:0015432, bile acid porter activity - GO:0015433, peptide antigen transporter activity - GO:0015435, ABC-type efflux permease activity - GO:0015436, capsular-polysaccharide-transporting ATPase activity - GO:0015437, lipopolysaccharide-transporting ATPase activity - GO:0015438, teichoic-acid-transporting ATPase activity - GO:0015439, heme-transporting ATPase activity - GO:0015440, peptide-transporting ATPase activity - GO:0015441, beta-glucan-transporting ATPase activity - GO:0015444, magnesium-importing ATPase activity - GO:0015445, silver-exporting ATPase activity - GO:0015446, arsenite-transporting ATPase activity - GO:0015462, protein-transporting ATPase activity - GO:0015594, putrescine porter activity - GO:0015595, spermidine porter activity - GO:0015596, glycine betaine/proline porter activity - GO:0015597, histidine/arginine/lysine/ornithine porter activity - GO:0015598, arginine porter activity - GO:0015599, glutamine porter activity - GO:0015600, glutamate/aspartate porter activity - GO:0015601, cystine/diaminopimelate porter activity - GO:0015602, leucine/isoleucine/valine porter activity - GO:0015608, carbohydrate uptake transporter activity - GO:0015609, maltooligosaccharide porter activity - GO:0015610, glycerol-phosphate porter activity - GO:0015611, D-ribose porter activity - GO:0015612, L-arabinose porter activity - GO:0015613, galactose/glucose (methylgalactoside) porter activity - GO:0015614, D-xylose porter activity - GO:0015615, D-allose porter activity - GO:0015616, DNA translocase activity - GO:0015617, pilin/fimbrilin exporter activity - GO:0015619, thiamin, thiamin pyrophosphate porter activity - GO:0015623, iron-chelate-transporting ATPase activity - GO:0015624, ferric-enterobactin porter activity - GO:0015625, ferric-hydroxamate porter activity - GO:0015662, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism - GO:0016146, protein-synthesizing GTPase activity, initiation - GO:0016147, protein-synthesizing GTPase activity, elongation - GO:0016148, protein-synthesizing GTPase activity, termination - GO:0016150, translation release factor activity, codon nonspecific - GO:0016463, zinc-exporting ATPase activity - GO:0016464, chloroplast protein-transporting ATPase activity - GO:0016887, ATPase activity - GO:0017034, Rap guanyl-nucleotide exchange factor activity - GO:0017112, Rab guanyl-nucleotide exchange factor activity - GO:0017116, single-stranded DNA dependent ATP dependent DNA helicase activity - GO:0017132, cyclic nucleotide dependent guanyl-nucleotide exchange factor activity - GO:0019829, cation-transporting ATPase activity - GO:0030676, Rac guanyl-nucleotide exchange factor activity - GO:0042623, ATPase activity, coupled - GO:0042624, ATPase activity, uncoupled - GO:0042625, ATPase activity, coupled to transmembrane movement of ions - GO:0042626, ATPase activity, coupled to transmembrane movement of substances - GO:0042961, antimonite-transporting ATPase activity - GO:0046623, sphingolipid-translocating ATPase activity - GO:0046961, hydrogen-transporting ATPase activity, rotational mechanism - GO:0046962, sodium-transporting ATPase activity, rotational mechanism Terms movements under GO Slim term 'DNA binding ; GO:0003677' - GO:0000014, single-stranded DNA specific endodeoxyribonuclease activity - GO:0000150, recombinase activity - GO:0000332, template for synthesis of G-rich strand of telomere DNA activity - GO:0000700, mismatch base pair DNA N-glycosylase activity - GO:0000701, purine-specific mismatch base pair DNA N-glycosylase activity - GO:0000702, oxidized base lesion DNA N-glycosylase activity - GO:0000703, pyrimidine-specific oxidized base lesion DNA N-glycosylase activity - GO:0000704, pyrimidine dimer DNA N-glycosylase activity - GO:0003678, DNA helicase activity - GO:0003720, telomerase activity - GO:0003721, telomeric template RNA reverse transcriptase activity - GO:0003904, deoxyribodipyrimidine photo-lyase activity - GO:0003905, alkylbase DNA N-glycosylase activity - GO:0003906, DNA-(apurinic or apyrimidinic site) lyase activity - GO:0003908, methylated-DNA-[protein]-cysteine S-methyltransferase activity - GO:0004003, ATP dependent DNA helicase activity - GO:0004520, endodeoxyribonuclease activity - GO:0004529, exodeoxyribonuclease activity - GO:0004530, deoxyribonuclease I activity - GO:0004531, deoxyribonuclease II activity - GO:0004536, deoxyribonuclease activity - GO:0004537, caspase-activated deoxyribonuclease activity - GO:0004844, uracil DNA N-glycosylase activity - GO:0008263, pyrimidine-specific mismatch base pair DNA N-glycosylase activity - GO:0008296, 3'-5' exodeoxyribonuclease activity - GO:0008297, single-stranded DNA specific exodeoxyribonuclease activity - GO:0008309, double-stranded DNA specific exodeoxyribonuclease activity - GO:0008310, single-stranded DNA specific 3'-5' exodeoxyribonuclease activity - GO:0008311, double-stranded DNA specific 3'-5' exodeoxyribonuclease activity - GO:0008534, purine-specific oxidized base lesion DNA N-glycosylase activity - GO:0008725, DNA-3-methyladenine glycosylase I activity - GO:0008821, crossover junction endoribonuclease activity - GO:0008833, deoxyribonuclease IV (phage-T4-induced) activity - GO:0008844, endodeoxyribonuclease RUS activity - GO:0008852, exodeoxyribonuclease I activity - GO:0008853, exodeoxyribonuclease III activity - GO:0008854, exodeoxyribonuclease V activity - GO:0008855, exodeoxyribonuclease VII activity - GO:0008856, exodeoxyribonuclease X activity - GO:0008858, exonuclease VIII activity - GO:0008946, oligonucleotidase activity - GO:0008997, ribonuclease R activity - GO:0009009, site-specific recombinase activity - GO:0009035, type I site-specific deoxyribonuclease activity - GO:0009036, type II site-specific deoxyribonuclease activity - GO:0009037, tyrosine-based site-specific recombinase activity - GO:0009378, Holliday junction helicase activity - GO:0009381, excinuclease ABC activity - GO:0015666, restriction endodeoxyribonuclease activity - GO:0015668, type III site-specific deoxyribonuclease activity - GO:0016888, endodeoxyribonuclease activity, producing 5'-phosphomonoesters - GO:0016889, endodeoxyribonuclease activity, producing other than 5'-phosphomonoesters - GO:0016890, site-specific endodeoxyribonuclease activity, specific for altered base - GO:0016895, exodeoxyribonuclease activity, producing 5'-phosphomonoesters - GO:0017065, single-strand selective uracil DNA N-glycosylase activity - GO:0017108, 5' flap endonuclease activity - GO:0019000, endonuclease G activity - GO:0019104, DNA N-glycosylase activity - GO:0045145, single-stranded DNA specific 5'-3' exodeoxyribonuclease activity - GO:0046403, polynucleotide 3'-phosphatase activity - GO:0046404, polynucleotide 5'-hydroxyl-kinase activity - GO:0048256, flap endonuclease activity - GO:0048257, 3' flap endonuclease activity Terms movements under GO Slim term 'RNA binding ; GO:0003723' - GO:0000171, ribonuclease MRP activity - GO:0000175, 3'-5' exoribonuclease activity - GO:0000213, tRNA-intron endonuclease activity - GO:0003724, RNA helicase activity - GO:0003726, double-stranded RNA adenosine deaminase activity - GO:0004004, ATP dependent RNA helicase activity - GO:0004521, endoribonuclease activity - GO:0004522, pancreatic ribonuclease activity - GO:0004523, ribonuclease H activity - GO:0004524, ribonuclease H1 activity - GO:0004525, ribonuclease III activity - GO:0004526, ribonuclease P activity - GO:0004532, exoribonuclease activity - GO:0004533, exoribonuclease H activity - GO:0004534, 5'-3' exoribonuclease activity - GO:0004535, poly(A)-specific ribonuclease activity - GO:0004540, ribonuclease activity - GO:0004549, tRNA-specific ribonuclease activity - GO:0008419, RNA lariat debranching enzyme activity - GO:0008847, Enterobacter ribonuclease activity - GO:0008859, exoribonuclease II activity - GO:0008946, oligonucleotidase activity - GO:0008995, ribonuclease E activity - GO:0008996, ribonuclease G activity - GO:0008997, ribonuclease R activity - GO:0016443, bidentate ribonuclease III activity - GO:0016891, endoribonuclease activity, producing 5'-phosphomonoesters - GO:0016892, endoribonuclease activity, producing other than 5'-phosphomonoesters - GO:0016896, exoribonuclease activity, producing 5'-phosphomonoesters - GO:0016897, exoribonuclease activity, producing 3'-phosphomonoesters - GO:0019000, endonuclease G activity - GO:0042781, 3' tRNA processing endoribonuclease activity - GO:0046589, ribonuclease T1 activity Terms movements under GO Slim term 'actin binding ; GO:0003779' - GO:0003788, actin monomer sequestering activity Terms movements under GO Slim term 'catalytic activity ; GO:0003824' + GO:0000150, recombinase activity + GO:0009009, site-specific recombinase activity Terms movements under GO Slim term 'nuclease activity ; GO:0004518' - GO:0008845, endonuclease VIII activity - GO:0019000, endonuclease G activity Terms movements under GO Slim term 'binding ; GO:0005488' + GO:0005041, low-density lipoprotein receptor activity + GO:0008034, lipoprotein binding + GO:0008035, high-density lipoprotein binding + GO:0030169, low-density lipoprotein binding + GO:0030492, hemoglobin binding + GO:0030519, snoRNP binding + GO:0042497, triacylated lipoprotein binding + GO:0042498, diacylated lipoprotein binding Terms movements under GO Slim term 'protein binding ; GO:0005515' - GO:0003719, transcription factor binding, cytoplasmic sequestering - GO:0005041, low-density lipoprotein receptor activity - GO:0008034, lipoprotein binding - GO:0008035, high-density lipoprotein binding - GO:0030169, low-density lipoprotein binding - GO:0030492, hemoglobin binding - GO:0030519, snoRNP binding - GO:0042497, triacylated lipoprotein binding - GO:0042498, diacylated lipoprotein binding Terms movements under GO Slim term 'cytoskeletal protein binding ; GO:0008092' - GO:0003777, microtubule motor activity - GO:0008569, minus-end-directed kinesin ATPase activity - GO:0008574, plus-end-directed kinesin ATPase activity - GO:0016326, kinesin motor activity Terms movements under GO Slim term 'apoptosis regulator activity ; GO:0016329' + GO:0008656, caspase activator activity New terms in process ontology (152 new terms) GO:0001765 GO:0006996 MGI D lipid raft formation GO:0016043 GO:0001766 GO:0006996 MGI D lipid raft polarization GO:0016043 GO:0010171 GO:0007275 TAIR D 823132 body morphogenesis GO:0010172 GO:0007275 TAIR D 823132 embryonic body morphogenesis GO:0035026 GO:0007275 FB D leading edge cell differentiation GO:0030154 GO:0035027 GO:0007275 FB D leading edge cell fate commitment GO:0030154 GO:0035028 GO:0007275 FB D leading edge cell fate determination GO:0030154 GO:0035029 GO:0007275 FB D dorsal closure, leading edge cell fate commitment GO:0030154 GO:0035036 GO:0000003 FB D 797384 sperm-egg recognition GO:0035037 GO:0000003 FB D 797384 sperm entry GO:0035038 GO:0000003 FB D 797384 female pronucleus formation GO:0016043 GO:0035039 GO:0000003 FB D 797384 male pronucleus formation GO:0035040 GO:0000003 FB D 797384 sperm nuclear envelope removal GO:0035041 GO:0000003 FB D 797384 sperm chromatin decondensation GO:0006259 GO:0016043 GO:0035042 GO:0000003 FB D 797384 exchange of chromosomal proteins GO:0006259 GO:0016043 GO:0035043 GO:0000003 FB D 797384 male pronuclear envelope synthesis GO:0016043 GO:0035044 GO:0000003 FB D 797384 sperm aster formation GO:0007010 GO:0035045 GO:0000003 FB D 797384 sperm plasma membrane breakdown GO:0035046 GO:0000003 FB D 823137 pronuclear migration GO:0035047 GO:0000003 FB D 823138 centrosomal and pronuclear rotation GO:0035048 GO:0006810 FB D 821367 splicing factor protein-nucleus import GO:0015031 GO:0019538 GO:0035050 GO:0007275 FB D 807831 embryonic heart tube development GO:0035051 GO:0007275 FB D 807831 cardiac cell differentiation GO:0030154 GO:0035052 GO:0007275 FB D 807831 aortic cell fate commitment (sensu Drosophila) GO:0030154 GO:0035053 GO:0007275 FB D 807831 heart proper cell fate commitment (sensu Drosophila) GO:0030154 GO:0035054 GO:0007275 FB D 807831 embryonic heart tube anterior/posterior pattern formation GO:0035055 GO:0008152 FB D regulation of nuclear mRNA splicing via U2-type spliceosome GO:0035056 GO:0008152 FB D negative regulation of nuclear mRNA splicing via U2-type spliceosome GO:0035057 GO:0008152 FB D positive regulation of nuclear mRNA splicing via U2-type spliceosome GO:0035058 GO:0016043 FB D 828187 sensory cilium biogenesis GO:0042963 GO:0016032 JL D phage assembly GO:0042964 GO:0006412 JL D thioredoxin biosynthesis GO:0042965 GO:0006412 JL D glutaredoxin biosynthesis GO:0042966 GO:0006412 JL D biotin carboxyl carrier protein biosynthesis GO:0042967 GO:0006412 JL D acyl-carrier protein biosynthesis GO:0042968 GO:0006810 JL D homoserine transport GO:0042969 GO:0006810 JL D lactone transport GO:0042976 GO:0007165 JL D 810575 tyrosine phosphorylation of JAK protein GO:0042977 GO:0007165 JL D 810575 tyrosine phosphorylation of JAK2 protein GO:0042981 GO:0008219 JL D 800967 regulation of apoptosis GO:0042982 GO:0019538 JL D 795430 amyloid precursor protein metabolism GO:0042983 GO:0006412 JL D 795430 amyloid precursor protein biosynthesis GO:0019538 GO:0042984 GO:0006412 JL D 795430 regulation of amyloid precursor protein biosynthesis GO:0019538 GO:0042985 GO:0006412 JL D 795430 negative regulation of amyloid precursor protein biosynthesis GO:0019538 GO:0042986 GO:0006412 JL D 795430 positive regulation of amyloid precursor protein biosynthesis GO:0019538 GO:0042987 GO:0009056 JL D 795430 amyloid precursor protein catabolism GO:0019538 GO:0042989 GO:0007010 JL D 582241 sequestering of actin monomers GO:0042990 GO:0006810 JL D 582241 regulation of transcription factor-nucleus import GO:0015031 GO:0019538 GO:0042991 GO:0006810 JL D 582241 transcription factor-nucleus import GO:0015031 GO:0019538 GO:0042992 GO:0006810 JL D 582241 negative regulation of transcription factor-nucleus import GO:0015031 GO:0019538 GO:0042993 GO:0006810 JL D 582241 positive regulation of transcription factor-nucleus import GO:0015031 GO:0019538 GO:0042994 GO:0006810 JL D 582241 cytoplasmic sequestering of transcription factor GO:0015031 GO:0019538 GO:0042996 GO:0006810 JL D 582241 regulation of Golgi to plasma membrane protein transport GO:0042997 GO:0006810 JL D 582241 negative regulation of Golgi to plasma membrane protein transport GO:0042998 GO:0006810 JL D 582241 positive regulation of Golgi to plasma membrane protein transport GO:0042999 GO:0006810 JL D 582241 regulation of Golgi to plasma membrane CFTR protein transport GO:0043000 GO:0006810 JL D 582241 Golgi to plasma membrane CFTR protein transport GO:0043001 GO:0006810 JL D 582241 Golgi to plasma membrane protein transport GO:0043002 GO:0006810 JL D 582241 negative regulation of Golgi to plasma membrane CFTR protein transport GO:0043003 GO:0006810 JL D 582241 positive regulation of Golgi to plasma membrane CFTR protein transport GO:0043004 GO:0006810 JL D 797250 cytoplasmic sequestering of CFTR protein GO:0043006 GO:0007165 JL D 802332 calcium-dependent phospholipase A2 activation GO:0043007 GO:0016043 JL D 819332 rDNA maintenance GO:0043009 GO:0007275 JL D 825690 embryonic development (sensu Vertebrata) GO:0043010 GO:0007275 JL D 825690 eye morphogenesis (sensu Vertebrata) GO:0043011 GO:0007275 JL D 825731 dendritic cell differentiation GO:0030154 GO:0043012 GO:0000003 JL D 819863 regulation of fusion of sperm to egg plasma membrane GO:0008150 GO:0043013 GO:0000003 JL D 819863 negative regulation of fusion of sperm to egg plasma membrane GO:0008150 GO:0043016 GO:0006412 JL D 829679 regulation of tumor necrosis factor-beta biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0043017 GO:0006412 JL D 829679 positive regulation of tumor necrosis factor-beta biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0043018 GO:0006412 JL D 829679 negative regulation of tumor necrosis factor-beta biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0043019 GO:0006950 JL D 823742 response to pathogenic insects GO:0009607 GO:0048262 GO:0007275 JIC D 824783 determination of dorsoventral asymmetry GO:0048263 GO:0007275 JIC D 824783 determination of dorsal identity GO:0048264 GO:0007275 JIC D 824783 determination of ventral identity GO:0048265 GO:0006950 JIC D 771072 response to pain GO:0048266 GO:0006950 JIC D 771072 behavioral response to pain GO:0007610 GO:0048267 GO:0006950 JIC D 771072 physiological response to pain GO:0048268 GO:0016043 JIC D 771072 clathrin cage assembly GO:0050650 GO:0005975 AI D 818510 chondroitin sulfate proteoglycan biosynthesis GO:0008152 GO:0009058 GO:0019538 GO:0050651 GO:0005975 AI D 818510 dermatan sulfate proteoglycan biosynthesis GO:0008152 GO:0009058 GO:0019538 GO:0050652 GO:0005975 AI D 818510 dermatan sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis GO:0008152 GO:0009058 GO:0019538 GO:0050653 GO:0005975 AI D 818510 chondroitin sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis GO:0008152 GO:0009058 GO:0019538 GO:0050654 GO:0005975 AI D 818510 chondroitin sulfate proteoglycan metabolism GO:0008152 GO:0019538 GO:0050655 GO:0005975 AI D 818510 dermatan sulfate proteoglycan metabolism GO:0008152 GO:0019538 GO:0050657 GO:0006810 AI D 819280 nucleic acid transport GO:0050658 GO:0006810 AI D 819280 RNA transport GO:0050663 GO:0007582 AI D 819849 cytokine secretion GO:0050665 GO:0008152 AI D 815749 hydrogen peroxide biosynthesis GO:0050666 GO:0006519 AI D 820545 regulation of homocysteine metabolism GO:0008152 GO:0050667 GO:0006519 AI D 820545 homocysteine metabolism GO:0008152 GO:0050668 GO:0006519 AI D 820545 positive regulation of homocysteine metabolism GO:0008152 GO:0050669 GO:0006519 AI D 820545 negative regulation of homocysteine metabolism GO:0008152 GO:0050670 GO:0008283 AI D 809236 regulation of lymphocyte proliferation GO:0009607 GO:0050671 GO:0008283 AI D 809236 positive regulation of lymphocyte proliferation GO:0009607 GO:0050672 GO:0008283 AI D 809236 negative regulation of lymphocyte proliferation GO:0009607 GO:0050673 GO:0008283 AI D 811113 epithelial cell proliferation GO:0050674 GO:0008283 AI D 811113 urothelial cell proliferation GO:0050675 GO:0008283 AI D 811113 regulation of urothelial cell proliferation GO:0050676 GO:0008283 AI D 811113 negative regulation of urothelial cell proliferation GO:0050677 GO:0008283 AI D 811113 positive regulation of urothelial cell proliferation GO:0009607 GO:0050678 GO:0008283 AI D 811113 regulation of epithelial cell proliferation GO:0050679 GO:0008283 AI D 811113 positive regulation of epithelial cell proliferation GO:0009607 GO:0050680 GO:0008283 AI D 811113 negative regulation of epithelial cell proliferation GO:0050684 GO:0008152 AI D 816551 regulation of mRNA processing GO:0050685 GO:0008152 AI D 816551 positive regulation of mRNA processing GO:0050686 GO:0008152 AI D 816551 negative regulation of mRNA processing GO:0050687 GO:0006950 AI D 795886 negative regulation of antiviral response GO:0009607 GO:0050688 GO:0006950 AI D 795886 regulation of antiviral response GO:0009607 GO:0050689 GO:0006950 AI D 795886 negative regulation by host of antiviral response GO:0009607 GO:0050690 GO:0006950 AI D 795886 viral regulation of antiviral response GO:0009607 GO:0050691 GO:0006950 AI D 795886 host regulation of antiviral response GO:0009607 GO:0050696 GO:0008152 AI D 825031 trichloroethylene catabolism GO:0009056 GO:0009628 GO:0050701 GO:0007582 AI D 824755 interleukin-1 secretion GO:0050702 GO:0007582 AI D 824755 interleukin-1 beta secretion GO:0050703 GO:0007582 AI D 824755 interleukin-1 alpha secretion GO:0050704 GO:0007582 AI D 824755 regulation of interleukin-1 secretion GO:0050705 GO:0007582 AI D 824755 regulation of interleukin-1 alpha secretion GO:0050706 GO:0007582 AI D 824755 regulation of interleukin-1 beta secretion GO:0050707 GO:0007582 AI D 824755 regulation of cytokine secretion GO:0050708 GO:0007582 AI D 824755 regulation of protein secretion GO:0050709 GO:0007582 AI D 824755 negative regulation of protein secretion GO:0050710 GO:0007582 AI D 824755 negative regulation of cytokine secretion GO:0050711 GO:0007582 AI D 824755 negative regulation of interleukin-1 secretion GO:0050712 GO:0007582 AI D 824755 negative regulation of interleukin-1 alpha secretion GO:0050713 GO:0007582 AI D 824755 negative regulation of interleukin-1 beta secretion GO:0050714 GO:0007582 AI D 824755 positive regulation of protein secretion GO:0050715 GO:0007582 AI D 824755 positive regulation of cytokine secretion GO:0050716 GO:0007582 AI D 824755 positive regulation of interleukin-1 secretion GO:0050717 GO:0007582 AI D 824755 positive regulation of interleukin-1 alpha secretion GO:0050718 GO:0007582 AI D 824755 positive regulation of interleukin-1 beta secretion GO:0050719 GO:0006412 AI D 824755 interleukin-1 alpha biosynthesis GO:0009607 GO:0019538 GO:0050720 GO:0006412 AI D 824755 interleukin-1 beta biosynthesis GO:0009607 GO:0019538 GO:0050721 GO:0006412 AI D 824755 regulation of interleukin-1 alpha biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0050722 GO:0006412 AI D 824755 regulation of interleukin-1 beta biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0050723 GO:0006412 AI D 824755 negative regulation of interleukin-1 alpha biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0050724 GO:0006412 AI D 824755 negative regulation of interleukin-1 beta biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0050725 GO:0006412 AI D 824755 positive regulation of interleukin-1 beta biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0050726 GO:0006412 AI D 824755 positive regulation of interleukin-1 alpha biosynthesis GO:0008152 GO:0009058 GO:0009607 GO:0019538 GO:0050727 GO:0006950 AI D 824755 regulation of inflammatory response GO:0009605 GO:0009607 GO:0050728 GO:0006950 AI D 824755 negative regulation of inflammatory response GO:0009605 GO:0009607 GO:0050729 GO:0006950 AI D 824755 positive regulation of inflammatory response GO:0009605 GO:0009607 GO:0050730 GO:0006464 AI D 829689 regulation of peptidyl-tyrosine phosphorylation GO:0008152 GO:0050731 GO:0006464 AI D 829689 positive regulation of peptidyl-tyrosine phosphorylation GO:0008152 GO:0050732 GO:0006464 AI D 829689 negative regulation of peptidyl-tyrosine phosphorylation GO:0008152 GO:0050739 GO:0006464 AI D peptide cross-linking via S-[5'-(L-tryptoph-6'-yl)-L-tyrosin-3'-yl]-L-methionin-S-ium GO:0050740 GO:0006464 AI D protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine GO:0050741 GO:0006464 AI D protein-FMN linkage via O3-riboflavin phosphoryl-L-serine GO:0050742 GO:0006464 AI D protein-FMN linkage via S-(4a-FMN)-L-cysteine GO:0050743 GO:0006464 AI D protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine GO:0050744 GO:0006464 AI D protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine GO:0050745 GO:0006464 AI D peptide cross-linking via L-cysteinyl-5-imidazolinone glycine New obsoletions in process ontology GO:0001526, proteoglycan sulfate transfer: represents a group of molecular functions. GO:0006803, glutathione conjugation reaction: represents a molecular function and not a biological process. Obsolete terms reinstated in process ontology GO:0045458, recombination within rDNA repeats: Term name changes in process ontology GO:0000054: ribosome nucleus export --> ribosome-nucleus export GO:0000055: ribosomal large subunit nucleus export --> ribosomal large subunit-nucleus export GO:0000056: ribosomal small subunit nucleus export --> ribosomal small subunit-nucleus export GO:0006690: eicosanoid metabolism --> icosanoid metabolism GO:0006924: peripheral killing of activated T-cells --> programmed cell death, activated T-cells GO:0006925: killing of inflammatory cells --> programmed cell death, inflammatory cells GO:0006926: killing virus-infected cells --> programmed cell death, virus-infected cells GO:0006927: killing transformed cells --> programmed cell death, transformed cells GO:0007342: binding/fusion of sperm to egg plasma membrane --> fusion of sperm to egg plasma membrane GO:0007393: leading edge cell fate determination --> dorsal closure, leading edge cell fate determination GO:0007394: elongation of leading edge cells --> dorsal closure, elongation of leading edge cells GO:0007395: spreading of leading edge cells --> dorsal closure, spreading of leading edge cells GO:0007513: pericardial cell development --> pericardial cell differentiation GO:0009615: response to viruses --> response to virus GO:0018069: protein-protein cross-linking via 4'-(L-tryptophan)-L-tryptophyl quinone --> peptide cross-linking via 4'-(L-tryptophan)-L-tryptophyl quinone GO:0018096: protein-protein cross-linking via S-(2-aminovinyl)-D-cysteine --> peptide cross-linking via S-(2-aminovinyl)-D-cysteine GO:0018124: protein-protein cross-linking via 5'-(N6-L-lysine)-L-topaquinone --> peptide cross-linking via 5'-(N6-L-lysine)-L-topaquinone GO:0018132: protein-protein cross-linking via L-cysteine oxazolecarboxylic acid --> peptide cross-linking via L-cysteine oxazolecarboxylic acid GO:0018133: protein-protein cross-linking via L-cysteine oxazolinecarboxylic acid --> peptide cross-linking via L-cysteine oxazolinecarboxylic acid GO:0018134: protein-protein cross-linking via glycine oxazolecarboxylic acid --> peptide cross-linking via glycine oxazolecarboxylic acid GO:0018137: protein-protein cross-linking via glycine thiazolecarboxylic acid --> peptide cross-linking via glycine thiazolecarboxylic acid GO:0018138: protein-protein cross-linking via L-serine thiazolecarboxylic acid --> peptide cross-linking via L-serine thiazolecarboxylic acid GO:0018139: protein-protein cross-linking via L-phenylalanine thiazolecarboxylic acid --> peptide cross-linking via L-phenylalanine thiazolecarboxylic acid GO:0018140: protein-protein cross-linking via L-cysteine thiazolecarboxylic acid --> peptide cross-linking via L-cysteine thiazolecarboxylic acid GO:0018141: protein-protein cross-linking via L-lysine thiazolecarboxylic acid --> peptide cross-linking via L-lysine thiazolecarboxylic acid GO:0018149: protein-protein cross-linking --> peptide cross-linking GO:0018150: protein-protein cross-linking via 3-(3'-L-histidyl)-L-tyrosine --> peptide cross-linking via 3-(3'-L-histidyl)-L-tyrosine GO:0018151: protein-protein cross-linking via L-histidyl-L-tyrosine --> peptide cross-linking via L-histidyl-L-tyrosine GO:0018152: protein-protein cross-linking via 3'-(1'-L-histidyl)-L-tyrosine --> peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine GO:0018154: protein-protein cross-linking via (2R,6R)-lanthionine --> peptide cross-linking via (2R,6R)-lanthionine GO:0018155: protein-protein cross-linking via sn-(2S,6R)-lanthionine --> peptide cross-linking via sn-(2S,6R)-lanthionine GO:0018156: protein-protein cross-linking via (2S,3S,6R)-3-methyl-lanthionine --> peptide cross-linking via (2S,3S,6R)-3-methyl-lanthionine GO:0018157: protein-protein cross-linking via an oxazole or thiazole --> peptide cross-linking via an oxazole or thiazole GO:0018162: protein-protein cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine --> peptide cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine GO:0018232: protein-protein cross-linking via S-(L-isoglutamyl)-L-cysteine --> peptide cross-linking via S-(L-isoglutamyl)-L-cysteine GO:0018233: protein-protein cross-linking via 2'-(S-L-cysteinyl)-L-histidine --> peptide cross-linking via 2'-(S-L-cysteinyl)-L-histidine GO:0018234: protein-protein cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine --> peptide cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine GO:0018252: biosynthesis of protein-protein cross-link via L-seryl-5-imidazolinone glycine --> peptide cross-linking via L-seryl-5-imidazolinone glycine GO:0018253: biosynthesis of protein-protein cross-link via 5-imidazolinone glycine --> peptide cross-linking via 5-imidazolinone glycine GO:0018255: protein-protein cross-linking via S-glycyl-L-cysteine --> peptide cross-linking via S-glycyl-L-cysteine GO:0018274: protein-protein cross-linking via L-lysinoalanine --> peptide cross-linking via L-lysinoalanine GO:0018313: protein-protein cross-linking via L-alanyl-5-imidazolinone glycine --> peptide cross-linking via L-alanyl-5-imidazolinone glycine GO:0018316: protein-protein cross-linking via L-cystine --> peptide cross-linking via L-cystine GO:0018420: protein-protein cross-linking via N6-(L-isoaspartyl)-L-lysine --> peptide cross-linking via N6-(L-isoaspartyl)-L-lysine GO:0018967: tetrachloroethene metabolism --> tetrachloroethylene metabolism GO:0019184: nonreciprocal peptide biosynthesis --> nonribosomal peptide biosynthesis GO:0019337: tetrachloroethene catabolism --> tetrachloroethylene catabolism GO:0019729: biosynthesis of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine --> peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine GO:0019800: protein-protein cross-linking via chondroitin 4-sulfate glycosaminoglycan --> peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan GO:0019927: protein-protein cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone --> peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone GO:0019928: protein-protein cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid --> peptide cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid GO:0019929: protein-protein cross-linking via 4-(S-L-cysteinyl)-L-glutamic acid --> peptide cross-linking via 4-(S-L-cysteinyl)-L-glutamic acid GO:0019938: protein-protein cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic --> peptide cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic GO:0030098: lymphocytic blood cell differentiation --> lymphocyte differentiation GO:0030466: chromatin silencing at silent mating type cassettes (sensu Fungi) --> chromatin silencing at silent mating-type cassettes (sensu Fungi) GO:0040032: body morphogenesis (sensu Nematoda) --> post-embryonic body morphogenesis GO:0042345: regulation of NF-kappaB protein-nucleus import --> regulation of NF-kappaB-nucleus import GO:0042346: positive regulation of NF-kappaB protein-nucleus import --> positive regulation of NF-kappaB-nucleus import GO:0042347: negative regulation of NF-kappaB protein-nucleus import --> negative regulation of NF-kappaB-nucleus import GO:0042792: rRNA transcription from mitochondrial promotor --> rRNA transcription from mitochondrial promoter GO:0042794: rRNA transcription from plastid promotor --> rRNA transcription from plastid promoter GO:0042918: alkanesulphonate transport --> alkanesulfonate transport GO:0046456: eicosanoid biosynthesis --> icosanoid biosynthesis GO:0046663: leading edge cell differentiation --> dorsal closure, leading edge cell differentiation GO:0046804: protein-protein cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide --> peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide GO:0046924: protein-protein cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine --> peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine GO:0046925: protein-protein cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine --> peptide cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine GO:0046926: protein-protein cross-linking via 2-(S-L-cysteinyl)-D-allo-threonine --> peptide cross-linking via 2-(S-L-cysteinyl)-D-allo-threonine GO:0048108: protein-protein cross-linking via 4-amino-3-isothiazolidinone --> peptide cross-linking via 4-amino-3-isothiazolidinone GO:0048109: protein-protein cross-linking via 2-amino-3-isothiazolidinone-L-serine --> peptide cross-linking via 2-amino-3-isothiazolidinone-L-serine New definitions for process ontology terms (29 new definitions) GO:0006352, transcription initiation GO:0006461, protein complex assembly GO:0006494, terminal glycosylation GO:0006496, terminal N-glycosylation GO:0006803, glutathione conjugation reaction GO:0007001, chromosome organization and biogenesis (sensu Eukarya) GO:0007340, acrosome reaction GO:0007341, penetration of zona pellucida GO:0007342, fusion of sperm to egg plasma membrane GO:0007343, egg activation GO:0007368, determination of left/right asymmetry GO:0007508, larval heart development GO:0007512, adult heart development GO:0007513, pericardial cell differentiation GO:0008588, release of cytoplasmic sequestered NF-kappaB GO:0015919, peroxisomal membrane transport GO:0016358, dendrite morphogenesis GO:0018151, peptide cross-linking via L-histidyl-L-tyrosine GO:0018157, peptide cross-linking via an oxazole or thiazole GO:0018280, S-linked glycosylation GO:0018313, peptide cross-linking via L-alanyl-5-imidazolinone glycine GO:0018317, C-linked glycosylation via tryptophan GO:0030539, male genital morphogenesis GO:0040035, hermaphrodite genital morphogenesis GO:0040038, polar body extrusion after meiotic divisions GO:0042003, masculinization of hermaphrodite soma (sensu Nematoda) GO:0042004, feminization of hermaphrodite soma (sensu Nematoda) GO:0046944, protein amino acid carbamoylation GO:0048114, polar granule organization and biogenesis (sensu Insecta) New term merges in process ontology GO:0007511 has been merged into GO:0007507, heart development GO:0046650 has been merged into GO:0030098, lymphocyte differentiation Term movements in process ontology: Terms movements under GO Slim term 'carbohydrate metabolism ; GO:0005975' - GO:0001526, proteoglycan sulfate transfer Terms movements under GO Slim term 'transport ; GO:0006810' + GO:0008588, release of cytoplasmic sequestered NF-kappaB Terms movements under GO Slim term 'response to stress ; GO:0006950' - GO:0009625, response to insects + GO:0019052, viral inhibition of intracellular antiviral response + GO:0019053, viral inhibition of extracellular antiviral response + GO:0046774, viral inhibition of intracellular interferon activity + GO:0046775, viral inhibition of host cytokine production + GO:0046776, viral inhibition of MHC class I cell surface presentation + GO:0046791, viral inhibition of host complement neutralization Terms movements under GO Slim term 'development ; GO:0007275' + GO:0007510, cardioblast cell fate determination + GO:0009997, negative regulation of cardioblast cell fate + GO:0010002, cardioblast differentiation + GO:0042684, cardioblast cell fate commitment + GO:0042685, cardioblast cell fate specification + GO:0042686, regulation of cardioblast cell fate + GO:0046652, thymocyte differentiation Terms movements under GO Slim term 'physiological processes ; GO:0007582' - GO:0010148, transpiration Terms movements under GO Slim term 'metabolism ; GO:0008152' - GO:0001308, loss of chromatin silencing during replicative cell aging - GO:0001526, proteoglycan sulfate transfer - GO:0006345, loss of chromatin silencing - GO:0006803, glutathione conjugation reaction Terms movements under GO Slim term 'cell proliferation ; GO:0008283' + GO:0046651, lymphocyte proliferation Terms movements under GO Slim term 'response to biotic stimulus ; GO:0009607' + GO:0030098, lymphocyte differentiation + GO:0045058, T-cell selection + GO:0045059, positive thymic T-cell selection + GO:0045060, negative thymic T-cell selection + GO:0045061, thymic T-cell selection + GO:0045062, extrathymic T-cell selection + GO:0045067, positive extrathymic T-cell selection + GO:0045068, negative extrathymic T-cell selection + GO:0045619, regulation of lymphocytic blood cell differentiation + GO:0045620, negative regulation of lymphocytic blood cell differentiation + GO:0045621, positive regulation of lymphocytic blood cell differentiation Terms movements under GO Slim term 'protein transport ; GO:0015031' + GO:0008588, release of cytoplasmic sequestered NF-kappaB Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043' + GO:0048202, clathrin coating of Golgi vesicle Terms movements under GO Slim term 'protein metabolism ; GO:0019538' + GO:0006029, proteoglycan metabolism + GO:0008588, release of cytoplasmic sequestered NF-kappaB + GO:0015012, heparan sulfate proteoglycan biosynthesis + GO:0015013, heparan sulfate proteoglycan biosynthesis, linkage to polypeptide + GO:0015014, heparan sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis + GO:0015015, heparan sulfate proteoglycan biosynthesis, enzymatic modification + GO:0018402, protein-chondroitin sulfate linkage via chondroitin sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine + GO:0019800, peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan + GO:0030166, proteoglycan biosynthesis + GO:0030167, proteoglycan catabolism + GO:0030200, heparan sulfate proteoglycan catabolism + GO:0030201, heparan sulfate proteoglycan metabolism + GO:0030204, chondroitin sulfate metabolism + GO:0030205, dermatan sulfate metabolism + GO:0030206, chondroitin sulfate biosynthesis + GO:0030207, chondroitin sulfate catabolism + GO:0030208, dermatan sulfate biosynthesis + GO:0030209, dermatan sulfate catabolism Terms movements under GO Slim term 'cell differentiation ; GO:0030154' + GO:0007513, pericardial cell differentiation + GO:0046652, thymocyte differentiation SourceForge items closed this month: SF id Resolution SF item title GO ids added, if any 582241 Fixed sequestering terms GO:0042989-42994 GO:0042996-43003 719337 Fixed definition of mRNA cap complex GO:0005845 [none] 771072 Fixed new term requests from Incyte GO:0048237-48257 GO:0048265-48268 776240 Works For Me More function ontology false paths - binding [none] 782690 Accepted nerve cell body GO:0043025 790468 Out of Date GO:0009626 [none] 795430 Works For Me negative regulation of protein binding GO:0042981-42988 795886 Works For Me negative regulation of antiviral response protein activity GO:0050687-50691 796593 Accepted PI3K complexes GO:0035030-35032 796597 Accepted URGENT: neurite GO:0042995 GO:0043005 797209 Rejected TGFbeta regulator activity [none] 797250 Accepted URGENT:CFTR Binding & Sequestering activity GO:0042980 GO:0043004 797384 Accepted new children of fertilization GO:0035036-35045 798510 Works For Me sperm storage and insemination [none] 799826 Fixed function term in process GO:0006803 [none] 800967 Accepted URGENT: regulation of apoptosis GO:0042981 802332 Accepted URGENT: calcium-dependent phospholipase A2 activation GO:0043006 803048 Accepted loss of chromatin silencing [none] 803125 Accepted new children of receptor binding GO:0042974-42975 803283 Out of Date GO:0008834/GO:0000010 [none] 807831 Fixed heart/dorsal vessel development GO:0035050-35054 808581 Accepted new synonym for DNA endoreduplication [none] 809228 Works For Me definition for oxidoreductase activity, acting on CH-OH... [none] 809236 Accepted negative regulation of lymphocyte proliferation GO:0050670-50672 810575 Accepted URGENT:activation of jak2 GO:0042976-42977 810591 Accepted induction of ornithine decarboxylase activity GO:0042978-42979 811113 Accepted EASY:urothelial cell proliferation GO:0050673-50680 811151 Accepted EASY: androgen receptor binding GO:0050681 811230 Accepted eicosatetraenoic acid binding GO:0050542-50544 GO:0050646-50648 811338 Works For Me change definition of fusome organization and biogenesis [none] 812609 Fixed change def. of Polar granule organization and biogenesis [none] 812614 Works For Me definition reference for acetate fermentation [none] 815016 Rejected glutamate carrier activity [none] 815423 Accepted GO:0046650 vs GO:0030098 [none] 815749 Works For Me Def for NADPH oxidase activity. GO:0050665 815830 Rejected UV-induced mutagenesis [none] 816551 Accepted Regulation of mRNA processing GO:0050684-50686 816622 Accepted AF2-domain binding GO:0050682-50683 GO:0050692-50693 816681 Accepted histone acetyltransferase regulator activity GO:0035033-35035 817121 Accepted testosterone 6-beta-hydroxylase activity GO:0050649 818510 Accepted URGENT: chondroitin sulfate/dermatan sulfate proteoglycan bi GO:0050650-50655 818511 Rejected URGENT: chondroitin N-acetylgalactosaminyltransferase... [none] 818546 Accepted URGENT: ATP-dependent protein binding GO:0043008 818802 Accepted EC:3.2.1.39 GO:0042973 818809 Accepted EC 3.2.1.73 GO:0042972 819239 Accepted ribosome binding GO:0043021-43024 819250 Accepted URGENT: N-acetylgalactosamine 6-O-sulfotransferase activity GO:0050659 819251 Duplicate URGENT: N-acetylgalactosamine 6-O-sulfotransferase activity [none] 819280 Accepted extra parents for GO:0006405 and GO:0006404 GO:0050657-50658 819282 Fixed possible endonuclease obsoletions? [none] 819297 Accepted URGENT: 3'-phosphoadenosine 5'-phosphosulfate binding GO:0050656 819332 Accepted possibly need new process term for rDNA maintenence GO:0043007 819481 Accepted Synonyms with ACP in it. [none] 819849 Accepted EASY:Binding terms GO:0050660-50663 GO:0043020 819863 Fixed sperm-oocyte fusion GO:0043012-43013 820521 Accepted GKB - synonym addition to "Oxygen binding" for P450 activity [none] 820545 Accepted EASY PEASY: regulation of homocysteine metabolism GO:0050666-50669 821141 Rejected URGENT: calcium channel complex [none] 821239 Accepted carbohydrate sulfation GO:0050694 821367 Accepted splicing factor protein-nucleus import GO:0035048 822702 Accepted regulation of nuclear mRNA splicing via U2-type spliceosome [none] 822733 Fixed Awful killing term names [none] 822786 Fixed Obsolete GO:0001526, proteoglycan sulfate transfer [none] 823123 Rejected Add WormBase to "Group" menu at Submit Tracker? [none] 823126 Accepted proposed definition for GO:0042003 [none] 823127 Accepted proposed definition for GO:0042004 [none] 823128 Accepted proposed definition for GO:0040038 [none] 823129 Accepted proposed definition for GO:0040035 [none] 823130 Accepted proposed definition for GO:0030539 [none] 823132 Accepted Proposed reorganization of some morphogenesis terms GO:0010171-10172 823137 Accepted request new term: "pronuclear migration" GO:0035046 823138 Accepted request new term: "centrosomal and pronuclear rotation" GO:0035047 823140 Accepted minor change, def.s of GO:0040022 + GO:0042006 [none] 823315 Fixed GO:0048193 : Golgi vesicle transport [none] 823511 Works For Me URGENT: immunoglobulin-like receptor activity [none] 823742 Fixed GO:0009625 : response to insects (0) GO:0043019 824028 Invalid add synonyms [none] 824121 Fixed Mitogen-activated protein kinase p38 binding GO:0048273 824755 Accepted EASY:children of cytokine secretion GO:0050701-50729 824763 Works For Me activation of NF-kappaB [none] 824783 Fixed dorsoventral asymmetry GO:0048262-48264 824788 Accepted EASY:CARD-domain binding GO:0050700 824793 Accepted juvenile hormone acid methyltransferase activity GO:0035049 824825 Accepted URGENT: methionine adenosyltransferase regulator GO:0048270 824827 Accepted URGENT: methionine adenosyltransferase complex GO:0048269 824973 Accepted enzoylformate decarboxylase GO:0050695 825012 Accepted trichloroethene reductive dehalogenase GO:0050697 825031 Accepted trichloroethene catabolism GO:0050696 825480 Fixed definition [none] 825547 Fixed garbled URLs [none] 825690 Accepted Moving terms from under 'sensu Mammalia' GO:0043009-43010 825731 Accepted Dendritic cell differentiation GO:0043011 826751 Accepted EASY:WW-domain binding GO:0050699 828187 Accepted sensory cilium biogenesis GO:0035058 828211 Fixed Definition for protein complex assembly ; GO:0006461 [none] 828219 Accepted EASY: gamma tubulin binding GO:0043014-43015 828236 Fixed regulation of F-actin localization [none] 828256 Fixed ACC oxidase (incorrect DBXref to EC) [none] 829247 Accepted New component terms from TAIR GO:0010168-10170 829679 Accepted VERY EASY:pos. reg. of TNF-beta biosynthesis GO:0043016-43018 829689 Accepted EASY: pos reg. peptidyl-tyrosine phosphorylation GO:0050730-50732 830899 Fixed Odd xrefs in files [none] 830930 Accepted A new child of protein domain specific binding GO:0050733 832370 Later transcription questions [none] 833035 Accepted neg.reg. caspase activation GO:0043027-43028 833046 Accepted VERY EASY; T-cell homeostasis GO:0043029 833048 Accepted 'regulation' of macrophage activation GO:0043030-43032 Statistics: Component: 1344 terms, 82.1% defined (1104 terms defined) Function: 7258 terms, 83.9% defined (6093 terms defined) Process: 7959 terms, 88.7% defined (7058 terms defined) Total: 16561 terms, 86.1% defined (14255 terms defined) Term errors none