GO Monthly Release Notes for May 2003 ======================== Generated on Mon Oct 27 12:29:21 2003 Files used: component old: 2.341 new: 2.360 function old: 2.675 new: 2.708 process old: 2.762 new: 2.793 definitions old: 2.1081 new: 2.1138 GO Slim: Generic.0208 Key: |----1----||----2-----||-3--||4||----5----||-----------6-----------| GO:0009941 GO:0009536 TAIR D SF:575119 chloroplast envelope (obs) 1. GO ID number 2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete. Terms with more than one GO-slim parent have further parents listed underneath the first parent. 3. Database that added term 4. indicates the existence of a definition for the term 5. the sourceforge request ID the term was added in response to 6. term name Columns are tab-delimited and can be imported into Excel for ease of reading. New terms in component ontology (28 new terms) GO:0000502 GO:0005634 SGD D proteasome complex (sensu Eukarya) GO:0005783 GO:0005829 GO:0000503 GO:0005829 SGD D proteasome core complex (sensu Bacteria) GO:0000504 GO:0005829 SGD D proteasome regulatory particle (sensu Bacteria) GO:0000811 GO:0000228 SGD D 709045 GINS complex GO:0000922 GO:0005856 SGD D spindle pole GO:0000923 GO:0005815 SGD D equatorial mitotic organizing center GO:0000924 GO:0005815 SGD D 735202 gamma-tubulin ring complex, centrosomal GO:0005856 GO:0000925 GO:0005815 SGD D 735202 gamma-tubulin ring complex, centrosomal (sensu Animalia) GO:0005856 GO:0000926 GO:0005815 SGD D 735202 gamma-tubulin large complex (sensu Animalia) GO:0005856 GO:0000927 GO:0005815 SGD D 735202 gamma-tubulin small complex (sensu Animalia) GO:0005856 GO:0000928 GO:0005815 SGD D 735202 gamma-tubulin complex (sensu Saccharomyces) GO:0005856 GO:0000929 GO:0005815 SGD D 735202 gamma-tubulin large complex (sensu Schizosaccharomyces) GO:0005856 GO:0000930 GO:0005815 SGD D 735202 gamma-tubulin complex GO:0000931 GO:0005815 SGD D 735202 gamma-tubulin large complex GO:0030684 GO:0005622 MAH D 741180 preribosome GO:0005737 GO:0030685 GO:0005622 MAH D 741180 nucleolar preribosome GO:0005730 GO:0005737 GO:0030686 GO:0005622 MAH D 741180 90S preribosome GO:0005730 GO:0005737 GO:0030687 GO:0005622 MAH D 741180 nucleolar preribosome, large subunit precursor GO:0005730 GO:0005737 GO:0030688 GO:0005622 MAH D 741180 nucleolar preribosome, small subunit precursor GO:0005730 GO:0005737 GO:0030689 GO:0005634 MAH D 730202 Noc complex GO:0030690 GO:0005622 MAH D 730202 Noc1p-Noc2p complex GO:0005634 GO:0005730 GO:0005737 GO:0030691 GO:0005622 MAH D 730202 Noc2p-Noc3p complex GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0030692 GO:0005622 MAH D 730202 Noc4p-Nop14p complex GO:0005634 GO:0005730 GO:0005737 GO:0042729 GO:0000228 JL D 723188 DASH complex GO:0005694 GO:0005856 GO:0042734 GO:0005578 JL D 751931 presynaptic membrane GO:0005623 GO:0042735 GO:0005737 JL D 726157 protein body GO:0046930 GO:0005623 AI D 730669 pore complex GO:0048046 GO:0005576 JIC D 668408 apoplast New obsoletions in component ontology GO:0005817, centrosomal mitotic factor: was not defined. GO:0005837, 26S proteasome: its definition was inaccurate. To update the annotations, consider the cellular component terms 'proteasome complex (sensu Eukarya) ; GO:0000502' and its children, 'proteasome core complex (sensu Bacteria) ; GO:0000503' and 'proteasome regulatory particle (sensu Bacteria) ; GO:0000504'. GO:0030615, spindle pole: the original definition was too narrow. Term name changes in component ontology GO:0005832: chaperonine-containing T-complex --> chaperonin-containing T-complex GO:0005838: 19S proteasome regulatory particle --> proteasome regulatory particle (sensu Eukarya) GO:0005839: 20S core proteasome complex --> proteasome core complex (sensu Eukarya) GO:0005960: glycine cleavage system complex --> glycine cleavage complex GO:0005968: RAB-protein geranylgeranyltransferase complex --> Rab-protein geranylgeranyltransferase complex GO:0008540: 19S proteasome regulatory particle, base subcomplex --> proteasome regulatory particle, base subcomplex (sensu Eukarya) GO:0008541: 19S proteasome regulatory particle, lid subcomplex --> proteasome regulatory particle, lid subcomplex (sensu Eukarya) GO:0019773: 20S core proteasome, alpha-subunit complex --> proteasome core complex, alpha-subunit complex (sensu Eukarya) GO:0019774: 20S core proteasome, beta-subunit complex --> proteasome core complex, beta-subunit complex (sensu Eukarya) GO:0030430: host cytoplasm --> host cell cytoplasm GO:0030526: granulocyte-macrophage colony stimulating factor receptor complex --> granulocyte macrophage colony-stimulating factor receptor complex New definitions for component ontology terms (12 new definitions) GO:0005817, centrosomal mitotic factor GO:0005818, aster GO:0005838, proteasome regulatory particle (sensu Eukarya) GO:0005875, microtubule associated complex GO:0005932, basal body GO:0005968, Rab-protein geranylgeranyltransferase complex GO:0008274, gamma-tubulin ring complex GO:0008275, gamma-tubulin small complex GO:0008537, proteasome activator complex GO:0008540, proteasome regulatory particle, base subcomplex (sensu Eukarya) GO:0008541, proteasome regulatory particle, lid subcomplex (sensu Eukarya) GO:0030615, spindle pole Term movements in component ontology: Terms movements under GO Slim term 'intracellular ; GO:0005622' + GO:0016610, nitrogenase complex + GO:0016611, iron-iron nitrogenase complex + GO:0016612, molybdenum-iron nitrogenase complex + GO:0016613, vanadium-iron nitrogenase complex Terms movements under GO Slim term 'cell ; GO:0005623' - GO:0005637, nuclear inner membrane - GO:0005638, lamin filament + GO:0005640, nuclear outer membrane + GO:0005643, nuclear pore + GO:0042563, importin alpha-subunit nuclear export complex + GO:0042564, NLS-dependent protein nuclear import complex + GO:0042565, RNA nuclear export complex + GO:0045211, postsynaptic membrane Terms movements under GO Slim term 'nucleus ; GO:0005634' + GO:0005838, proteasome regulatory particle (sensu Eukarya) + GO:0005839, proteasome core complex (sensu Eukarya) + GO:0008540, proteasome regulatory particle, base subcomplex (sensu Eukarya) + GO:0008541, proteasome regulatory particle, lid subcomplex (sensu Eukarya) + GO:0019773, proteasome core complex, alpha-subunit complex (sensu Eukarya) + GO:0019774, proteasome core complex, beta-subunit complex (sensu Eukarya) Terms movements under GO Slim term 'nuclear membrane ; GO:0005635' - GO:0005640, nuclear outer membrane Terms movements under GO Slim term 'cytoplasm ; GO:0005737' + GO:0009346, citrate lyase complex Terms movements under GO Slim term 'endoplasmic reticulum ; GO:0005783' + GO:0005838, proteasome regulatory particle (sensu Eukarya) + GO:0005839, proteasome core complex (sensu Eukarya) + GO:0008540, proteasome regulatory particle, base subcomplex (sensu Eukarya) + GO:0008541, proteasome regulatory particle, lid subcomplex (sensu Eukarya) + GO:0019773, proteasome core complex, alpha-subunit complex (sensu Eukarya) + GO:0019774, proteasome core complex, beta-subunit complex (sensu Eukarya) Terms movements under GO Slim term 'microtubule organizing center ; GO:0005815' - GO:0005817, centrosomal mitotic factor - GO:0005818, aster + GO:0005932, basal body Terms movements under GO Slim term 'cytosol ; GO:0005829' - GO:0005837, 26S proteasome Terms movements under GO Slim term 'cytoskeleton ; GO:0005856' + GO:0000242, pericentriolar material + GO:0005813, centrosome + GO:0005814, centriole + GO:0005818, aster + GO:0008274, gamma-tubulin ring complex - GO:0030615, spindle pole Terms movements under GO Slim term 'unlocalized ; GO:0005941' - GO:0009346, citrate lyase complex - GO:0016610, nitrogenase complex - GO:0016611, iron-iron nitrogenase complex - GO:0016612, molybdenum-iron nitrogenase complex - GO:0016613, vanadium-iron nitrogenase complex New terms in function ontology (16 new terms) GO:0000505 GO:0003824 SGD D 729255 cystathionine gamma synthase activity GO:0030693 GO:0008233 MAH D 731534 caspase activity GO:0042731 GO:0005515 JL D 731446 PH-domain binding activity GO:0042736 GO:0003824 JL D 737200 NADH kinase activity GO:0046923 GO:0005488 AI D 728362 ER retention sequence binding activity GO:0046932 GO:0005215 AI D 729490 sodium-transporting ATP synthase activity GO:0046933 GO:0005215 AI D 729490 hydrogen-transporting ATP synthase activity GO:0046934 GO:0003824 AI D 731410 phosphatidylinositol-4,5-bisphosphate 3-kinase activity GO:0046935 GO:0030234 AI D 731410 phosphatidylinositol 3-kinase regulator activity GO:0046936 GO:0003824 AI D 733207 deoxyadenosine deaminase activity GO:0046941 GO:0003824 AI D 742329 azetidine-2-carboxylic acid acetyltransferase activity GO:0046943 GO:0005215 AI D 742419 carboxylic acid transporter activity GO:0048043 GO:0003824 JIC D 733409 para-hydroxybenzoate transferase activity GO:0048044 GO:0003824 JIC D 733409 para-hydroxybenzoate-polyprenyl diphosphate transferase activity GO:0048045 GO:0003824 JIC D 733409 trans-pentaprenyltranstransferase activity GO:0048059 GO:0003824 JIC D 702902 dopachrome decarboxylase activity New obsoletions in function ontology GO:0000259, intracellular nucleoside transporter activity: contains component and function information. GO:0004199, caspase activity: was defined incorrectly, in terms specific to a gene product. GO:0004200, signaling (initiator) caspase activity: includes biological process information. GO:0004201, caspase-1 activity: represents a gene product. GO:0004202, caspase-2 activity: represents a gene product. GO:0004203, caspase-4 activity: represents a gene product. GO:0004204, caspase-5 activity: represents a gene product. GO:0004205, caspase-8 activity: represents a gene product. GO:0004206, caspase-10 activity: represents a gene product. GO:0004207, effector caspase activity: includes biological process information. GO:0004208, caspase-3 activity: represents a gene product. GO:0004209, caspase-6 activity: represents a gene product. GO:0004210, caspase-7 activity: represents a gene product. GO:0004211, caspase-9 activity: represents a gene product. GO:0004299, proteasome endopeptidase activity: mentions a component term in the text string. GO:0005045, endoplasmic reticulum receptor activity: represents cellular component and molecular function information. GO:0008075, receptor guanylate cyclase activity: represents a class of gene products. GO:0008229, opsonin activity: represents a class of gene products. GO:0008529, endogenous peptide receptor activity: contains both component and function information. GO:0008530, exogenous peptide receptor activity: contains both component and function information. GO:0008575, proteasome ATPase activity: mentions a component term in the term text string. GO:0015072, phosphatidylinositol 3-kinase, class I, catalyst activity: represents a class of gene products. GO:0015073, phosphatidylinositol 3-kinase, class I, regulator activity: refers to a class of gene products. GO:0015289, pore-forming toxin activity: represents a class of gene products. GO:0015465, lysin activity: represents a class of gene products. GO:0015466, autolysin activity: represents a class of gene products. GO:0015469, channel-forming toxin activity: represents a class of gene products. GO:0015470, bacteriocin activity: represents a gene product. GO:0015484, hemolysin activity: represents a gene product. GO:0015642, bacteriolytic toxin activity: represents a class of gene products and not a molecular function. GO:0016304, phosphatidylinositol 3-kinase activity, class I: represents a class of gene products. GO:0016305, phosphatidylinositol 3-kinase activity, class II: represents a class of gene products. GO:0016306, phosphatidylinositol 3-kinase activity, class III: represents a class of gene products. GO:0019844, endotoxin activity: represents a class of gene products. GO:0019845, exotoxin activity: represents a class of gene products. GO:0019846, enterotoxin activity: represents a class of gene products. GO:0019847, neurotoxin activity: represents a class of gene products. GO:0019848, conotoxin activity: represents a gene product. GO:0019849, cytotoxin activity: represents a class of gene products. Term name changes in function ontology GO:0001531: interleukin-21 receptor ligand activity --> interleukin-21 receptor binding activity GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase activity --> 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity GO:0003962: O-succinyl-L-homoserine (thiol)-lyase activity --> cystathionine gamma-synthase activity GO:0004970: ionotropic glutamate receptor activity --> inotropic glutamate receptor activity GO:0005046: KDEL receptor activity --> KDEL sequence binding activity GO:0005047: signal recognition particle receptor activity --> signal recognition particle binding activity GO:0005048: signal sequence receptor activity --> signal sequence binding activity GO:0005126: hematopoietin/interferon-class (D200-domain) cytokine receptor ligand activity --> hematopoietin/interferon-class (D200-domain) cytokine receptor binding activity GO:0005127: ciliary neurotrophic factor receptor ligand activity --> ciliary neurotrophic factor receptor binding activity GO:0005128: erythropoietin receptor ligand activity --> erythropoietin receptor binding activity GO:0005129: granulocyte macrophage colony-stimulating factor receptor ligand activity --> granulocyte macrophage colony-stimulating factor receptor binding activity GO:0005130: granulocyte colony-stimulating factor receptor ligand activity --> granulocyte colony-stimulating factor receptor binding activity GO:0005131: growth hormone receptor ligand activity --> growth hormone receptor binding activity GO:0005132: interferon-alpha/beta receptor ligand activity --> interferon-alpha/beta receptor binding activity GO:0005133: interferon-gamma receptor ligand activity --> interferon-gamma receptor binding activity GO:0005134: interleukin-2 receptor ligand activity --> interleukin-2 receptor binding activity GO:0005135: interleukin-3 receptor ligand activity --> interleukin-3 receptor binding activity GO:0005136: interleukin-4 receptor ligand activity --> interleukin-4 receptor binding activity GO:0005137: interleukin-5 receptor ligand activity --> interleukin-5 receptor binding activity GO:0005138: interleukin-6 receptor ligand activity --> interleukin-6 receptor binding activity GO:0005139: interleukin-7 receptor ligand activity --> interleukin-7 receptor binding activity GO:0005140: interleukin-9 receptor ligand activity --> interleukin-9 receptor binding activity GO:0005141: interleukin-10 receptor ligand activity --> interleukin-10 receptor binding activity GO:0005142: interleukin-11 receptor ligand activity --> interleukin-11 receptor binding activity GO:0005143: interleukin-12 receptor ligand activity --> interleukin-12 receptor binding activity GO:0005144: interleukin-13 receptor ligand activity --> interleukin-13 receptor binding activity GO:0005145: interleukin-14 receptor ligand activity --> interleukin-14 receptor binding activity GO:0005146: leukemia inhibitory factor receptor ligand activity --> leukemia inhibitory factor receptor binding activity GO:0005147: oncostatin-M receptor ligand activity --> oncostatin-M receptor binding activity GO:0005148: prolactin receptor ligand activity --> prolactin receptor binding activity GO:0005149: interleukin-1 receptor ligand activity --> interleukin-1 receptor binding activity GO:0005150: interleukin-1, Type I receptor ligand activity --> interleukin-1, Type I receptor binding activity GO:0005151: interleukin-1, Type II receptor ligand activity --> interleukin-1, Type II receptor binding activity GO:0005153: interleukin-8 receptor ligand activity --> interleukin-8 receptor binding activity GO:0005154: epidermal growth factor receptor ligand activity --> epidermal growth factor receptor binding activity GO:0005157: macrophage colony stimulating factor receptor ligand activity --> macrophage colony stimulating factor receptor binding activity GO:0005160: transforming growth factor-beta receptor ligand activity --> transforming growth factor-beta receptor binding activity GO:0005161: platelet-derived growth factor receptor ligand activity --> platelet-derived growth factor receptor binding activity GO:0005163: nerve growth factor receptor ligand activity --> nerve growth factor receptor binding activity GO:0005164: tumor necrosis factor receptor ligand activity --> tumor necrosis factor receptor binding activity GO:0005165: neurotrophin receptor ligand activity --> neurotrophin receptor binding activity GO:0005166: neurotrophin p75 receptor ligand activity --> neurotrophin p75 receptor binding activity GO:0005167: neurotrophin TRK receptor ligand activity --> neurotrophin TRK receptor binding activity GO:0005168: neurotrophin TRKA receptor ligand activity --> neurotrophin TRKA receptor binding activity GO:0005169: neurotrophin TRKB receptor ligand activity --> neurotrophin TRKB receptor binding activity GO:0005170: neurotrophin TRKC receptor ligand activity --> neurotrophin TRKC receptor binding activity GO:0005171: hepatocyte growth factor receptor ligand activity --> hepatocyte growth factor receptor binding activity GO:0005172: vascular endothelial growth factor receptor ligand activity --> vascular endothelial growth factor receptor binding activity GO:0005176: Neu/ErbB-2 receptor ligand activity --> Neu/ErbB-2 receptor binding activity GO:0008185: transforming growth factor-alpha receptor ligand activity --> transforming growth factor-alpha receptor binding activity GO:0008317: gurken receptor ligand activity --> gurken receptor binding activity GO:0015643: antitoxin activity --> toxin binding activity GO:0016170: interleukin-15 receptor ligand activity --> interleukin-15 receptor binding activity GO:0030116: glial cell line-derived neurotrophic factor receptor ligand activity --> glial cell line-derived neurotrophic factor receptor binding activity GO:0030367: interleukin-17 receptor ligand activity --> interleukin-17 receptor binding activity GO:0030372: high molecular weight B-cell growth factor receptor ligand activity --> high molecular weight B-cell growth factor receptor binding activity GO:0030380: interleukin-17E receptor ligand activity --> interleukin-17E receptor binding activity GO:0045015: HDEL receptor activity --> HDEL sequence binding activity GO:0045152: anti-sigma factor antagonist activity --> antisigma factor binding activity GO:0045514: interleukin-16 receptor ligand activity --> interleukin-16 receptor binding activity GO:0045515: interleukin-18 receptor ligand activity --> interleukin-18 receptor binding activity GO:0045516: interleukin-19 receptor ligand activity --> interleukin-19 receptor binding activity GO:0045517: interleukin-20 receptor ligand activity --> interleukin-20 receptor binding activity GO:0045518: interleukin-22 receptor ligand activity --> interleukin-22 receptor binding activity GO:0045519: interleukin-23 receptor ligand activity --> interleukin-23 receptor binding activity GO:0045520: interleukin-24 receptor ligand activity --> interleukin-24 receptor binding activity GO:0045521: interleukin-25 receptor ligand activity --> interleukin-25 receptor binding activity GO:0045522: interleukin-26 receptor ligand activity --> interleukin-26 receptor binding activity GO:0045523: interleukin-27 receptor ligand activity --> interleukin-27 receptor binding activity GO:0046919: pyruvyltransferase --> pyruvyltransferase activity GO:0046920: alpha(1,3)-fucosyltransferase --> alpha(1,3)-fucosyltransferase activity GO:0046921: alpha(1,6)-fucosyltransferase --> alpha(1,6)-fucosyltransferase activity GO:0046922: peptide-O-fucosyltransferase --> peptide-O-fucosyltransferase activity New definitions for function ontology terms (99 new definitions) GO:0000149, SNARE binding activity GO:0000259, intracellular nucleoside transporter activity GO:0001595, angiotensin receptor activity GO:0001605, adrenomedullin receptor activity GO:0001607, neuromedin U receptor activity GO:0001631, cysteinyl leukotriene receptor activity GO:0001632, leukotriene B4 receptor activity GO:0003680, AT DNA binding activity GO:0003681, bent DNA binding activity GO:0003707, steroid hormone receptor activity GO:0003708, retinoic acid receptor activity GO:0004200, signaling (initiator) caspase activity GO:0004202, caspase-2 activity GO:0004203, caspase-4 activity GO:0004204, caspase-5 activity GO:0004205, caspase-8 activity GO:0004206, caspase-10 activity GO:0004207, effector caspase activity GO:0004209, caspase-6 activity GO:0004210, caspase-7 activity GO:0004211, caspase-9 activity GO:0004874, aryl hydrocarbon receptor activity GO:0004879, ligand-dependent nuclear receptor activity GO:0004880, juvenile hormone receptor activity GO:0004882, androgen receptor activity GO:0004883, glucocorticoid receptor activity GO:0004884, ecdysteroid hormone receptor activity GO:0004887, thyroid hormone receptor activity GO:0004891, glycine-inhibited chloride channel activity GO:0004931, ATP-gated cation channel activity GO:0004942, anaphylatoxin receptor activity GO:0004946, bombesin receptor activity GO:0004947, bradykinin receptor activity GO:0004951, cholecystokinin receptor activity GO:0004966, galanin receptor activity GO:0004969, histamine receptor activity GO:0004970, inotropic glutamate receptor activity GO:0004971, alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity GO:0004972, N-methyl-D-aspartate selective glutamate receptor activity GO:0004974, leukotriene receptor activity GO:0004977, melanocortin receptor activity GO:0004978, adrenocorticotropin receptor activity GO:0004979, beta-endorphin receptor activity GO:0004982, N-formyl peptide receptor activity GO:0004985, opioid receptor activity GO:0004989, octopamine receptor activity GO:0004990, oxytocin receptor activity GO:0004993, serotonin receptor activity GO:0004994, somatostatin receptor activity GO:0004995, tachykinin receptor activity GO:0005000, vasopressin receptor activity GO:0005045, endoplasmic reticulum receptor activity GO:0005046, KDEL sequence binding activity GO:0005048, signal sequence binding activity GO:0005055, laminin receptor activity GO:0005232, serotonin-activated cation-selective channel activity GO:0005234, glutamate-gated ion channel activity GO:0005546, phosphatidylinositol-4,5-bisphosphate binding activity GO:0005547, phosphatidylinositol-3,4,5-triphosphate binding activity GO:0008036, diuretic hormone receptor activity GO:0008066, glutamate receptor activity GO:0008068, glutamate-gated chloride channel activity GO:0008095, inositol-1,4,5-triphosphate receptor activity GO:0008097, 5S RNA binding activity GO:0008134, transcription factor binding activity GO:0008188, neuropeptide receptor activity GO:0008196, vitellogenin receptor activity GO:0008226, tyramine receptor activity GO:0008261, allatostatin receptor activity GO:0008281, sulfonylurea receptor activity GO:0008327, methyl-CpG binding activity GO:0008434, vitamin D3 receptor activity GO:0008502, melatonin receptor activity GO:0008529, endogenous peptide receptor activity GO:0008530, exogenous peptide receptor activity GO:0009387, DNA supercoiling activity GO:0015054, gastrin receptor activity GO:0015057, thrombin receptor activity GO:0015277, kainate selective glutamate receptor activity GO:0015469, channel-forming toxin activity GO:0016499, orexin receptor activity GO:0016596, thienylcyclohexylpiperidine binding activity GO:0017025, TATA-binding protein binding activity GO:0017047, adrenocorticotropin-releasing hormone binding activity GO:0017048, Rho binding activity GO:0017058, FH1-domain binding activity GO:0017082, mineralocorticoid receptor activity GO:0017124, SH3-domain binding activity GO:0017147, Wnt-protein binding activity GO:0019237, centromeric DNA binding activity GO:0019904, protein domain specific binding activity GO:0030165, PDZ-domain binding activity GO:0030274, LIM-domain binding activity GO:0030275, LRR-domain binding activity GO:0030284, estrogen receptor activity GO:0030369, ICAM-3 receptor activity GO:0030373, high molecular weight B-cell growth factor receptor activity GO:0042162, telomeric DNA binding activity GO:0042169, SH2-domain binding activity New term merges in function ontology GO:0003936 has been merged into GO:0008553, hydrogen-exporting ATPase activity GO:0008249 has been merged into GO:0005048, signal sequence binding activity GO:0015443 has been merged into GO:0008554, sodium-exporting ATPase activity GO:0015463 has been merged into GO:0008565, protein transporter activity GO:0016766 has been merged into GO:0016765, transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0019839 has been merged into GO:0005085, guanyl-nucleotide exchange factor activity GO:0045207 has been merged into GO:0045206, MAPK phosphatase transporter activity Term movements in function ontology: Terms movements under GO Slim term 'defense/immunity protein activity ; GO:0003793' - GO:0008229, opsonin activity Terms movements under GO Slim term 'enzyme activity ; GO:0003824' - GO:0008075, receptor guanylate cyclase activity - GO:0008575, proteasome ATPase activity - GO:0015072, phosphatidylinositol 3-kinase, class I, catalyst activity - GO:0015073, phosphatidylinositol 3-kinase, class I, regulator activity - GO:0016304, phosphatidylinositol 3-kinase activity, class I - GO:0016305, phosphatidylinositol 3-kinase activity, class II - GO:0016306, phosphatidylinositol 3-kinase activity, class III - GO:0016941, natriuretic peptide receptor activity Terms movements under GO Slim term 'receptor activity ; GO:0004872' - GO:0004889, nicotinic acetylcholine-activated cation-selective channel activity - GO:0004891, glycine-inhibited chloride channel activity - GO:0004931, ATP-gated cation channel activity - GO:0005037, death receptor adaptor protein activity - GO:0005038, death receptor interacting protein activity - GO:0005039, death receptor-associated factor activity - GO:0005045, endoplasmic reticulum receptor activity - GO:0005046, KDEL sequence binding activity - GO:0005047, signal recognition particle binding activity - GO:0005048, signal sequence binding activity - GO:0005232, serotonin-activated cation-selective channel activity - GO:0005234, glutamate-gated ion channel activity - GO:0008068, glutamate-gated chloride channel activity - GO:0008075, receptor guanylate cyclase activity - GO:0008529, endogenous peptide receptor activity - GO:0008530, exogenous peptide receptor activity - GO:0016923, ligand-dependent thyroid hormone receptor interactor activity - GO:0017164, nicotinic acetylcholine receptor-associated protein activity - GO:0030375, thyroid hormone receptor co-activator activity - GO:0045015, HDEL sequence binding activity Terms movements under GO Slim term 'cell adhesion molecule activity ; GO:0005194' - GO:0005055, laminin receptor activity - GO:0030369, ICAM-3 receptor activity Terms movements under GO Slim term 'structural molecule activity ; GO:0005198' - GO:0015289, pore-forming toxin activity - GO:0015469, channel-forming toxin activity - GO:0015470, bacteriocin activity - GO:0015484, hemolysin activity - GO:0015642, bacteriolytic toxin activity - GO:0019844, endotoxin activity - GO:0019845, exotoxin activity - GO:0019846, enterotoxin activity - GO:0019847, neurotoxin activity - GO:0019848, conotoxin activity - GO:0019849, cytotoxin activity Terms movements under GO Slim term 'transporter activity ; GO:0005215' - GO:0000259, intracellular nucleoside transporter activity - GO:0015289, pore-forming toxin activity - GO:0015469, channel-forming toxin activity - GO:0015484, hemolysin activity Terms movements under GO Slim term 'ion channel activity ; GO:0005216' - GO:0004890, GABA-A receptor activity - GO:0004970, inotropic glutamate receptor activity - GO:0004971, alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity - GO:0004972, N-methyl-D-aspartate selective glutamate receptor activity - GO:0008281, sulfonylurea receptor activity - GO:0008503, benzodiazepine receptor activity - GO:0015277, kainate selective glutamate receptor activity - GO:0017164, nicotinic acetylcholine receptor-associated protein activity Terms movements under GO Slim term 'binding activity ; GO:0005488' + GO:0000268, peroxisome targeting sequence binding activity - GO:0004889, nicotinic acetylcholine-activated cation-selective channel activity + GO:0005046, KDEL sequence binding activity + GO:0005047, signal recognition particle binding activity + GO:0005048, signal sequence binding activity + GO:0005051, peroxisome targeting signal receptor activity + GO:0005052, peroxisome targeting signal-1 receptor activity + GO:0005053, peroxisome targeting signal-2 receptor activity + GO:0008139, nuclear localization sequence binding activity - GO:0008229, opsonin activity - GO:0008717, D-alanyl-D-alanine endopeptidase activity + GO:0009940, amino-terminal propeptide binding activity - GO:0015484, hemolysin activity + GO:0016941, natriuretic peptide receptor activity - GO:0017164, nicotinic acetylcholine receptor-associated protein activity + GO:0045015, HDEL sequence binding activity Terms movements under GO Slim term 'protein binding activity ; GO:0005515' - GO:0000268, peroxisome targeting sequence binding activity - GO:0005051, peroxisome targeting signal receptor activity - GO:0005052, peroxisome targeting signal-1 receptor activity - GO:0005053, peroxisome targeting signal-2 receptor activity - GO:0008139, nuclear localization sequence binding activity - GO:0009940, amino-terminal propeptide binding activity + GO:0045152, antisigma factor binding activity Terms movements under GO Slim term 'peptidase activity ; GO:0008233' - GO:0004199, caspase activity - GO:0004200, signaling (initiator) caspase activity - GO:0004201, caspase-1 activity - GO:0004202, caspase-2 activity - GO:0004203, caspase-4 activity - GO:0004204, caspase-5 activity - GO:0004205, caspase-8 activity - GO:0004206, caspase-10 activity - GO:0004207, effector caspase activity - GO:0004208, caspase-3 activity - GO:0004209, caspase-6 activity - GO:0004210, caspase-7 activity - GO:0004211, caspase-9 activity - GO:0004299, proteasome endopeptidase activity Terms movements under GO Slim term 'enzyme regulator activity ; GO:0030234' - GO:0015073, phosphatidylinositol 3-kinase, class I, regulator activity - GO:0015465, lysin activity - GO:0015466, autolysin activity - GO:0015470, bacteriocin activity - GO:0015642, bacteriolytic toxin activity Terms movements under GO Slim term 'transcription regulator activity ; GO:0030528' - GO:0003707, steroid hormone receptor activity - GO:0003708, retinoic acid receptor activity - GO:0004879, ligand-dependent nuclear receptor activity - GO:0004880, juvenile hormone receptor activity - GO:0004882, androgen receptor activity - GO:0004883, glucocorticoid receptor activity - GO:0004884, ecdysteroid hormone receptor activity - GO:0004886, retinoid-X receptor activity - GO:0004887, thyroid hormone receptor activity - GO:0008434, vitamin D3 receptor activity - GO:0017082, mineralocorticoid receptor activity - GO:0030284, estrogen receptor activity - GO:0045152, antisigma factor binding activity New terms in process ontology (94 new terms) GO:0001100 GO:0007049 SGD D 737327 negative regulation of exit from mitosis GO:0001101 GO:0009628 SGD D 736702 response to acid GO:0010104 GO:0006350 TAIR D regulation of ethylene mediated signaling pathway GO:0007165 GO:0009719 GO:0010105 GO:0006350 TAIR D negative regulation of ethylene mediated signaling pathway GO:0007165 GO:0009719 GO:0010106 GO:0006950 TAIR D cellular response to iron ion starvation GO:0007154 GO:0009605 GO:0009607 GO:0010107 GO:0006811 TAIR D potassium ion import GO:0010108 GO:0007154 TAIR D glutamine sensing GO:0009605 GO:0009628 GO:0010109 GO:0007582 TAIR D regulation of photosynthesis GO:0010110 GO:0005975 TAIR D regulation of photosynthesis, dark reaction GO:0007582 GO:0009058 GO:0010111 GO:0006996 TAIR D glyoxysome organization and biogenesis GO:0010112 GO:0006950 TAIR D regulation of systemic acquired resistance GO:0009607 GO:0010113 GO:0006950 TAIR D negative regulation of systemic acquired resistance GO:0009607 GO:0010114 GO:0009628 TAIR D response to red light GO:0010115 GO:0006629 TAIR D regulation of abscisic acid biosynthesis GO:0008152 GO:0009058 GO:0010116 GO:0006629 TAIR D positive regulation of abscisic acid biosynthesis GO:0008152 GO:0009058 GO:0010117 GO:0009628 TAIR D photoprotection GO:0010118 GO:0007582 TAIR D stomatal movement GO:0010119 GO:0007582 TAIR D regulation of stomatal movement GO:0030682 GO:0009607 MAH D 738222 evasion of host defense response GO:0030383 GO:0030683 GO:0009607 MAH D 738222 viral evasion of host immune response GO:0016032 GO:0030383 GO:0042730 GO:0007582 JL D 731446 fibrinolysis GO:0042732 GO:0005975 JL D 731446 xylose metabolism GO:0008152 GO:0042733 GO:0007275 JL D 731446 digit morphogenesis GO:0042737 GO:0008152 JL D 740345 drug catabolism GO:0009056 GO:0042738 GO:0008152 JL D 740345 exogenous drug catabolism GO:0009056 GO:0009628 GO:0042739 GO:0008152 JL D 740345 endogenous drug catabolism GO:0009056 GO:0042740 GO:0008152 JL D 740345 exogenous antibiotic catabolism GO:0009056 GO:0009628 GO:0042741 GO:0008152 JL D 740345 endogenous antibiotic catabolism GO:0009056 GO:0042742 GO:0009607 JL D 740345 defense response to bacteria GO:0042743 GO:0008152 JL D 741731 hydrogen peroxide metabolism GO:0042744 GO:0006950 JL D 741731 hydrogen peroxide catabolism GO:0008152 GO:0009607 GO:0046924 GO:0006464 AI D protein-protein cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine GO:0046925 GO:0006464 AI D protein-protein cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine GO:0046926 GO:0006464 AI D protein-protein cross-linking via 2-(S-L-cysteinyl)-D-allo-threonine GO:0046927 GO:0006464 AI D peptidyl-threonine racemization GO:0006519 GO:0008152 GO:0046928 GO:0007267 AI D 730669 regulation of neurotransmitter secretion GO:0007582 GO:0046929 GO:0007267 AI D 730669 negative regulation of neurotransmitter secretion GO:0007582 GO:0046931 GO:0016043 AI D 730669 pore complex biogenesis GO:0046937 GO:0008152 AI D 735184 phytochelatin metabolism GO:0046938 GO:0008152 AI D 735184 phytochelatin biosynthesis GO:0046939 GO:0008152 AI D 738487 nucleotide phosphorylation GO:0046940 GO:0008152 AI D 738487 nucleoside monophosphate phosphorylation GO:0046942 GO:0006810 AI D 742419 carboxylic acid transport GO:0046944 GO:0006464 AI D protein amino acid carbamoylation GO:0046945 GO:0006464 AI D N-terminal peptidyl-alanine N-carbamoylation GO:0048042 GO:0007610 JIC D 734000 regulation of oviposition, post-mating GO:0048047 GO:0007610 JIC D 733997 mating behavior, sex discrimination GO:0048048 GO:0007275 JIC D 682296 embryonic eye morphogensis GO:0048049 GO:0007275 JIC D 682296 embryonic eye morphogensis (sensu Drosophila) GO:0048050 GO:0007275 JIC D 682296 post-embryonic eye morphogenesis GO:0048051 GO:0007275 JIC D 682296 post-embryonic eye morphogenesis (sensu Drosophila) GO:0048052 GO:0007275 JIC D 682296 R1/R6 differentiation (sensu Drosophila) GO:0048053 GO:0007275 JIC D 682296 R1/R6 development (sensu Drosophila) GO:0016043 GO:0030154 GO:0048054 GO:0007275 JIC D 682296 R2/R5 differentiation (sensu Drosophila) GO:0048055 GO:0007275 JIC D 682296 R2/R5 development (sensu Drosophila) GO:0016043 GO:0030154 GO:0048056 GO:0007275 JIC D 682296 R3/R4 differentiation (sensu Drosophila) GO:0048057 GO:0007275 JIC D 682296 R3/R4 development (sensu Drosophila) GO:0016043 GO:0030154 GO:0048058 GO:0007275 JIC D 682296 corneal lens formation (sensu Drosophila) GO:0048060 GO:0009605 JIC D 737018 negative gravitaxis GO:0009628 GO:0048061 GO:0009605 JIC D 737018 positive gravitaxis GO:0009628 GO:0048062 GO:0007610 JIC D 737018 gravitactic behavior GO:0009605 GO:0009628 GO:0048063 GO:0007610 JIC D 737018 negative gravitactic behavior GO:0009605 GO:0009628 GO:0048064 GO:0007610 JIC D 737018 positive gravitactic behavior GO:0009605 GO:0009628 GO:0048065 GO:0007610 JIC D 741020 male courtship behavior (sensu Drosophila), wing extension GO:0048066 GO:0007275 JIC D pigmentation GO:0048067 GO:0007275 JIC D cuticle pigmentation GO:0009058 GO:0048068 GO:0007275 JIC D adult cuticle pigmentation (sensu Insecta) GO:0007582 GO:0009058 GO:0048069 GO:0007275 JIC D 703075 eye pigmentation GO:0048070 GO:0007275 JIC D 703075 regulation of pigmentation GO:0048071 GO:0007275 JIC D 703075 sex-specific pigmentation GO:0048072 GO:0007275 JIC D 703075 eye pigmentation (sensu Drosophila) GO:0048073 GO:0007275 JIC D 703075 regulation of eye pigmentation GO:0048074 GO:0007275 JIC D 703075 negative regulation of eye pigmentation GO:0048075 GO:0007275 JIC D 703075 positive regulation of eye pigmentation GO:0048076 GO:0007275 JIC D 703075 regulation of eye pigmentation (sensu Drosophila) GO:0048077 GO:0007275 JIC D 703075 negative regulation of eye pigmentation (sensu Drosophila) GO:0048078 GO:0007275 JIC D 703075 positive regulation of eye pigmentation (sensu Drosophila) GO:0048079 GO:0007275 JIC D 703075 regulation of cuticle pigmentation GO:0009058 GO:0048080 GO:0007275 JIC D 703075 negative regulation of cuticle pigmentation GO:0009058 GO:0048081 GO:0007275 JIC D 703075 positive regulation of cuticle pigmentation GO:0009058 GO:0048082 GO:0007275 JIC D 703075 regulation of adult cuticle pigmentation GO:0009058 GO:0048083 GO:0007275 JIC D 703075 negative regulation of adult cuticle pigmentation GO:0009058 GO:0048084 GO:0007275 JIC D 703075 positive regulation of adult cuticle pigmentation GO:0009058 GO:0048085 GO:0007275 JIC D 703075 adult cuticle pigmentation GO:0009058 GO:0048086 GO:0007275 JIC D 703075 negative regulation of pigmentation GO:0048087 GO:0007275 JIC D 703075 positive regulation of pigmentation GO:0048088 GO:0007275 JIC D 703075 regulation of male pigmentation GO:0048089 GO:0007275 JIC D 703075 regulation of female pigmentation GO:0048090 GO:0007275 JIC D 703075 negative regulation of female pigmentation GO:0048091 GO:0007275 JIC D 703075 positive regulation of female pigmentation GO:0048092 GO:0007275 JIC D 703075 negative regulation of male pigmentation GO:0048093 GO:0007275 JIC D 703075 positive regulation of male pigmentation GO:0048094 GO:0007275 JIC D 703075 male pigmentation GO:0048095 GO:0007275 JIC D 703075 female pigmentation New obsoletions in process ontology GO:0001753, adult eye photoreceptor development (sensu Drosophila): eye photoreceptors have completed their development by the time the adult phase begins. GO:0006153, purine nucleosidase reaction: represents a molecular function. GO:0006155, adenosine deaminase reaction: represents a molecular function. GO:0006158, deoxyadenosine deaminase reaction: represents a molecular function. GO:0006197, adenylate deaminase reaction: represents a molecular function. GO:0006224, uridine kinase reaction: represents a molecular function. GO:0006439, aminoacyl-tRNA hydrolase reaction: represents a molecular function. GO:0006466, protein disulfide-isomerase reaction: presents a molecular function. GO:0006802, catalase reaction: represents a molecular function. GO:0006804, peroxidase reaction: represents a molecular function. GO:0019940, SUMO-dependent protein catabolism: does not reflect an accurate biological process, as sumoylation of a protein does not lead to catabolism of that protein. Term name changes in process ontology GO:0001745: adult eye morphogenesis (sensu Drosophila) --> compound eye morphogenesis (sensu Drosophila) GO:0001746: larval eye morphogenesis (sensu Drosophila) --> Bolwig's organ morphogenesis GO:0007096: exit from mitosis --> regulation of exit from mitosis GO:0007564: regulation of cuticle tanning and hardening --> regulation of cuticle tanning GO:0008359: regulation of pole plasm bicoid mRNA localization --> regulation of bicoid mRNA localization GO:0019049: viral-host defense evasion --> viral host defense evasion GO:0019054: virus-host cell process manipulation --> viral host cell process manipulation GO:0019094: pole plasm-mRNA localization --> pole plasm mRNA localization GO:0019095: pole plasm-mitochondrial rRNA localization --> pole plasm mitochondrial rRNA localization GO:0019096: pole plasm-mitochondrial lrRNA localization --> pole plasm mitochondrial lrRNA localization GO:0019097: pole plasm-mitochondrial srRNA localization --> pole plasm mitochondrial srRNA localization GO:0020012: immune evasion --> evasion of host immune response GO:0045229: external protective structure organization and biogenesis --> external encapsulating structure organization and biogenesis GO:0045450: pole plasm bicoid mRNA localization --> bicoid mRNA localization GO:0045800: negative regulation of cuticle tanning and hardening --> negative regulation of cuticle tanning GO:0045801: positive regulation of cuticle tanning and hardening --> positive regulation of cuticle tanning GO:0045853: negative regulation of pole plasm bicoid mRNA localization --> negative regulation of bicoid mRNA localization GO:0045854: positive regulation of pole plasm bicoid mRNA localization --> positive regulation of bicoid mRNA localization New definitions for process ontology terms (44 new definitions) GO:0001580, bitter taste perception GO:0001581, sour taste perception GO:0001582, sweet taste perception GO:0001583, salty taste perception GO:0006153, purine nucleosidase reaction GO:0006155, adenosine deaminase reaction GO:0006158, deoxyadenosine deaminase reaction GO:0006197, adenylate deaminase reaction GO:0006224, uridine kinase reaction GO:0006466, protein disulfide-isomerase reaction GO:0006804, peroxidase reaction GO:0006960, antimicrobial humoral response (sensu Invertebrata) GO:0006961, antibacterial humoral response (sensu Invertebrata) GO:0006962, male-specific antibacterial humoral response GO:0006966, antifungal humoral response (sensu Invertebrata) GO:0007007, inner mitochondrial membrane organization and biogenesis GO:0007008, outer mitochondrial membrane organization and biogenesis GO:0007096, regulation of exit from mitosis GO:0007476, wing morphogenesis GO:0007607, taste GO:0007608, olfaction GO:0008033, tRNA processing GO:0008348, attenuation of antimicrobial humoral response GO:0009666, plastid outer membrane organization and biogenesis GO:0009667, plastid inner membrane organization and biogenesis GO:0009668, plastid membrane organization and biogenesis GO:0016044, membrane organization and biogenesis GO:0019654, acetate fermentation GO:0019663, homoacetate fermentation GO:0019665, amino acid fermentation GO:0019667, alanine fermentation GO:0019669, glycine fermentation GO:0019670, glutamate fermentation GO:0019730, antimicrobial humoral response GO:0019731, antibacterial humoral response GO:0019732, antifungal humoral response GO:0019733, antibacterial humoral response (sensu Vertebrata) GO:0019734, antifungal humoral response (sensu Vertebrata) GO:0019735, antimicrobial humoral response (sensu Vertebrata) GO:0019940, SUMO-dependent protein catabolism GO:0030326, limb morphogenesis GO:0042154, attenuation of antimicrobial humoral response (sensu Invertebrata) GO:0042155, attenuation of antimicrobial humoral response (sensu Vertebrata) GO:0042246, tissue regeneration New term merges in process ontology GO:0016927 has been merged into GO:0016925, protein sumoylation GO:0016928 has been merged into GO:0016926, protein desumoylation GO:0045452 has been merged into GO:0007593, cuticle tanning Term movements in process ontology: Terms movements under GO Slim term 'protein biosynthesis ; GO:0006412' - GO:0006439, aminoacyl-tRNA hydrolase reaction Terms movements under GO Slim term 'protein modification ; GO:0006464' - GO:0006466, protein disulfide-isomerase reaction Terms movements under GO Slim term 'transport ; GO:0006810' + GO:0015713, phosphoglycerate transport + GO:0015747, urate transport Terms movements under GO Slim term 'ion transport ; GO:0006811' + GO:0019532, oxalate transport Terms movements under GO Slim term 'response to stress ; GO:0006950' - GO:0006802, catalase reaction Terms movements under GO Slim term 'development ; GO:0007275' - GO:0001753, adult eye photoreceptor development (sensu Drosophila) + GO:0006582, melanin metabolism + GO:0006583, melanin biosynthesis from tyrosine + GO:0006726, eye pigment biosynthesis + GO:0006727, ommochrome biosynthesis + GO:0006782, protoporphyrinogen IX biosynthesis + GO:0006783, heme biosynthesis + GO:0006784, heme a biosynthesis + GO:0006785, heme b biosynthesis + GO:0006786, heme c biosynthesis + GO:0006788, heme oxidation + GO:0006856, eye pigment precursor transport + GO:0008055, ocellus pigment biosynthesis + GO:0015994, chlorophyll metabolism + GO:0015995, chlorophyll biosynthesis + GO:0015996, chlorophyll catabolism + GO:0016063, rhodopsin biosynthesis + GO:0019352, protoporphyrinogen IX biosynthesis from glycine + GO:0019353, protoporphyrinogen IX biosynthesis from glutamate + GO:0019354, siroheme biosynthesis + GO:0030493, bacteriochlorophyll metabolism + GO:0030494, bacteriochlorophyll biosynthesis + GO:0030495, bacteriochlorophyll catabolism + GO:0042167, heme catabolism + GO:0042168, heme metabolism + GO:0042438, melanin biosynthesis + GO:0042440, pigment metabolism + GO:0042441, eye pigment metabolism + GO:0046148, pigment biosynthesis + GO:0046149, pigment catabolism + GO:0046150, melanin catabolism + GO:0046151, eye pigment catabolism + GO:0046152, ommochrome metabolism + GO:0046153, ommochrome catabolism + GO:0046154, rhodopsin metabolism + GO:0046155, rhodopsin catabolism + GO:0046156, siroheme metabolism + GO:0046157, siroheme catabolism + GO:0046158, ocellus pigment metabolism + GO:0046159, ocellus pigment catabolism + GO:0046160, heme a metabolism + GO:0046161, heme a catabolism + GO:0046162, heme c metabolism + GO:0046163, heme c catabolism + GO:0046492, heme b metabolism + GO:0048021, regulation of melanin biosynthesis + GO:0048022, negative regulation of melanin biosynthesis + GO:0048023, positive regulation of melanin biosynthesis + GO:0048033, heme o metabolism + GO:0048034, heme o biosynthesis + GO:0048035, heme o catabolism Terms movements under GO Slim term 'physiological processes ; GO:0007582' + GO:0007564, regulation of cuticle tanning - GO:0020012, evasion of host immune response - GO:0020033, antigenic variation + GO:0045800, negative regulation of cuticle tanning + GO:0045801, positive regulation of cuticle tanning Terms movements under GO Slim term 'biological_process ; GO:0008150' - GO:0006935, chemotaxis - GO:0009453, energy taxis - GO:0009454, aerotaxis - GO:0009455, redox taxis - GO:0009995, soluble molecule recognition - GO:0030593, neutrophil chemotaxis - GO:0030595, immune cell chemotaxis + GO:0042144, vacuole fusion (non-autophagic) + GO:0042145, homotypic vacuole fusion (non-autophagic) + GO:0042146, heterotypic vacuole fusion (non-autophagic) - GO:0042330, taxis - GO:0042331, phototaxis - GO:0042332, gravitaxis - GO:0042333, chemotaxis to oxidizable substrate - GO:0042334, taxis to electron acceptor Terms movements under GO Slim term 'metabolism ; GO:0008152' - GO:0006153, purine nucleosidase reaction - GO:0006155, adenosine deaminase reaction - GO:0006158, deoxyadenosine deaminase reaction - GO:0006197, adenylate deaminase reaction - GO:0006224, uridine kinase reaction - GO:0006802, catalase reaction - GO:0006804, peroxidase reaction Terms movements under GO Slim term 'catabolism ; GO:0009056' - GO:0006153, purine nucleosidase reaction - GO:0006155, adenosine deaminase reaction - GO:0006158, deoxyadenosine deaminase reaction - GO:0006197, adenylate deaminase reaction - GO:0016925, protein sumoylation - GO:0016926, protein desumoylation - GO:0019940, SUMO-dependent protein catabolism Terms movements under GO Slim term 'biosynthesis ; GO:0009058' - GO:0006224, uridine kinase reaction + GO:0007564, regulation of cuticle tanning + GO:0007593, cuticle tanning + GO:0045800, negative regulation of cuticle tanning + GO:0045801, positive regulation of cuticle tanning Terms movements under GO Slim term 'response to biotic stimulus ; GO:0009607' - GO:0006802, catalase reaction + GO:0019049, viral host defense evasion + GO:0019050, viral inhibition of apoptosis + GO:0019051, induction of apoptosis by virus + GO:0019052, viral inhibition of intracellular antiviral response + GO:0019053, viral inhibition of extracellular antiviral response + GO:0020012, evasion of host immune response + GO:0020033, antigenic variation + GO:0046773, viral inhibition of host cell protein biosynthesis shutoff + GO:0046774, viral inhibition of intracellular interferon activity + GO:0046775, viral inhibition of host cytokine production + GO:0046776, viral inhibition of MHC class I cell surface presentation + GO:0046791, viral inhibition of host complement neutralization Terms movements under GO Slim term 'response to abiotic stimulus ; GO:0009628' - GO:0016999, antibiotic metabolism - GO:0017000, antibiotic biosynthesis - GO:0017001, antibiotic catabolism - GO:0017144, drug metabolism - GO:0019872, streptomycin biosynthesis - GO:0030647, aminoglycoside antibiotic metabolism - GO:0030648, aminoglycoside antibiotic biosynthesis - GO:0030649, aminoglycoside antibiotic catabolism - GO:0030650, peptide antibiotic metabolism - GO:0030651, peptide antibiotic biosynthesis - GO:0030652, peptide antibiotic catabolism - GO:0030653, beta-lactam antibiotic metabolism - GO:0030654, beta-lactam antibiotic biosynthesis - GO:0030655, beta-lactam antibiotic catabolism - GO:0042316, penicillin metabolism - GO:0042317, penicillin catabolism - GO:0042318, penicillin biosynthesis + GO:0042332, gravitaxis - GO:0046343, streptomycin metabolism - GO:0046584, enniatin metabolism - GO:0046585, enniatin biosynthesis Terms movements under GO Slim term 'cell organization and biogenesis ; GO:0016043' - GO:0001753, adult eye photoreceptor development (sensu Drosophila) + GO:0007462, R1/R6 cell fate commitment + GO:0007463, R2/R5 cell fate commitment + GO:0007464, R3/R4 cell fate commitment Terms movements under GO Slim term 'protein metabolism ; GO:0019538' - GO:0016925, protein sumoylation - GO:0016926, protein desumoylation - GO:0019940, SUMO-dependent protein catabolism Terms movements under GO Slim term 'cell differentiation ; GO:0030154' - GO:0001753, adult eye photoreceptor development (sensu Drosophila) Terms movements under GO Slim term 'host-pathogen interaction ; GO:0030383' + GO:0020012, evasion of host immune response + GO:0020033, antigenic variation SourceForge items closed this month: SF id Resolution SF item title GO ids added, if any 631119 Fixed Gamma-tubulin complex terms GO:0000924-00931 648174 Fixed true path violation? 19839 GO:0030695 648710 Accepted comment for obsolete importin (C) terms [none] 668408 Fixed Apoplast GO:0048046 679509 Fixed 26S proteasome [none] 682296 Fixed optic lobe placode development (sensu Drosophila) GO:0048048-48058 688682 Later Process terms to be checked [none] 702212 Fixed protein secretion/secretory pathway query GO:0046903 702902 Accepted dopachrome decarboxylase activity GO:0048059 703075 Accepted pigmentation GO:0048069-48095 707616 Rejected basidium (fruiting body sunsu Fungi) [none] 707641 Fixed something from GK [none] 710431 Accepted TAIR process terms GO:0010014-10031 718402 Accepted JNK kinase kinase activity ; GO:0004706 etc GO:0042655-42656 719772 Accepted more on mitochondria GO:0042709 720618 Works For Me RNase P RNase MRP GO:0030677-30681 721374 Fixed obsolete-proteasome endopeptidase and proteasome ATPase act [none] 723188 Accepted DASH complex GO:0042729 726157 Accepted protein body GO:0042735 728362 Fixed protein-ER targeting various GO:0046923 728983 Fixed regulation of transcription by homeotic gene [none] 729255 Accepted cystathionine gamma synthase GO:0000505 729490 Fixed Hydrogen and sodium transporters GO:0046932-46933 729608 Accepted desumoylation/protein desumoylation [none] 730202 Accepted Noc complexes GO:0030689-30692 730669 Fixed Toxic terms for obsoletion GO:0046928-46931 730813 None vacuole fusion additional parentge [none] 731266 Fixed Function ontology false paths [none] 731410 Fixed Some phosphatidylinositol 3-kinase obsoletions GO:0046934-46935 731534 Fixed caspase terms GO:0030693 733207 Fixed Function terms in process ontology GO:0046936 733409 Fixed ubiquinone GO:0048043-48045 733997 Fixed mating behavior\, sex discrimination GO:0048047 734000 Accepted regulation of oviposition\, post-mating GO:0048042 735184 Accepted phytochelatin synthesis GO:0046937-46938 735202 Accepted gamma-tubulin complex (sensu fungi ??) GO:0000924-00931 736687 None New replication complex (GINS complex) [none] 736702 Accepted New BP term: response to weak acid GO:0001101 737018 Accepted gravitaxis GO:0048060-48064 737064 Fixed fix def of GO:0046728 [none] 737073 Rejected axoplasm [none] 737102 Duplicate giant axon [none] 737200 Accepted NADH kinase GO:0042736 737327 None Exit from mitosis: definition GO:0001100 737585 Rejected perikaryon [none] 737631 Accepted giant axon GO:0042734 738222 Accepted defense response GO:0030682-30683 738412 None change to term name of GO:0003962 [none] 738487 Fixed true path violation, nucleoside diphosphate phosphorylation? GO:0046939-46940 738675 Fixed Strange IDs in GO.defs [none] 738727 Accepted presynaptic membrane GO:0042734 738915 Accepted merge 16765 and 16766? [none] 740345 Fixed metabolism /drug metabolism true path violation? GO:0042737-42742 740538 Rejected GO:0000773 and GO:0004608 appear to be the same [none] 741020 None male courtship behavior (sensu Drosophila), wing extension GO:0048065 741154 Fixed glycine cleavage complex 0005960 [none] 741180 Accepted preribosome GO:0030684-30688 741731 Accepted hydrogen peroxide removal GO:0042743-42744 741753 Works For Me 5.3.1.16 [none] 742329 Accepted azetidine-2-carboxylic acid acetyltransferase GO:0046941 742419 Fixed organic anion/acid assignment clarification GO:0046942-46943 742420 Works For Me viral host shutoff protein ; 0019040 [none] 745073 Accepted add synonym and EC number for GO:4124 [none] 745433 Fixed type 1 and type 2 FGFR binding ctivity [none] 745436 Fixed bicoid mRNA localization [none] Statistics: Component: 1293 terms, 78.1% defined (1010 terms defined) Function: 5402 terms, 69.7% defined (3767 terms defined) Process: 7266 terms, 84.9% defined (6170 terms defined) Total: 13961 terms, 78.4% defined (10947 terms defined) Term errors none