GO Monthly Release Notes for June 2007
========================
Generated on Thu Jul 19 07:04:58 2007

Files used:
gene_ontology.obo
OLD: version 4.247, 30:05:2007 19:30
NEW: version 4.268, 29:06:2007 19:30
goslim_generic

Key:

|----1----||----2-----||-3--||4||----5----||-----------6-----------|
GO:0009941  GO:0009536  TAIR  D  SF:575119  chloroplast envelope
				 (obs)

1. GO ID number
2. GO-slim term(s) that new term was added under or "obs" if the term is obsolete.
Terms with more than one GO-slim parent have further parents listed underneath the first parent.
3. Database that added term
4. indicates the existence of a definition for the term
5. the sourceforge request ID the term was added in response to
6. term name

Columns are tab-delimited and can be imported into Excel for ease of reading.

New terms in biological_process ontology (83 new terms)
GO:0014073	GO:0008150	EF	D	      	response to tropane
GO:0014074	GO:0008150	EF	D	      	response to purine
GO:0033223	GO:0006810	MAH	D	      	2-aminoethylphosphonate transport
GO:0033227	GO:0006810	MAH	D	      	dsRNA transport
GO:0033228	GO:0006810	MAH	D	1723526	cysteine export
GO:0033231	GO:0006810	MAH	D	      	carbohydrate export
GO:0033233	GO:0006464	MAH	D	      	regulation of protein sumoylation
         	GO:0050789
GO:0033234	GO:0006464	MAH	D	      	negative regulation of protein sumoylation
         	GO:0050789
GO:0033235	GO:0006464	MAH	D	      	positive regulation of protein sumoylation
         	GO:0050789
GO:0033238	GO:0008152	MAH	D	      	regulation of amine metabolic process
         	GO:0050789
GO:0033239	GO:0008152	MAH	D	      	negative regulation of amine metabolic process
         	GO:0050789
GO:0033240	GO:0008152	MAH	D	      	positive regulation of amine metabolic process
         	GO:0050789
GO:0033241	GO:0009056	MAH	D	      	regulation of amine catabolic process
         	GO:0050789
GO:0033242	GO:0009056	MAH	D	      	negative regulation of amine catabolic process
         	GO:0050789
GO:0033243	GO:0009056	MAH	D	      	positive regulation of amine catabolic process
         	GO:0050789
GO:0033244	GO:0008152	MAH	D	      	regulation of penicillin metabolic process
         	GO:0050789
GO:0033245	GO:0008152	MAH	D	      	negative regulation of penicillin metabolic process
         	GO:0050789
GO:0033246	GO:0008152	MAH	D	      	positive regulation of penicillin metabolic process
         	GO:0050789
GO:0033247	GO:0009056	MAH	D	      	regulation of penicillin catabolic process
         	GO:0050789
GO:0033248	GO:0009056	MAH	D	      	negative regulation of penicillin catabolic process
         	GO:0050789
GO:0033249	GO:0009056	MAH	D	      	positive regulation of penicillin catabolic process
         	GO:0050789
GO:0033252	GO:0008150	MAH	D	      	regulation of beta-lactamase activity
GO:0033253	GO:0008150	MAH	D	      	regulation of penicillinase activity
GO:0033258	GO:0006259	MAH	D	      	plastid DNA metabolic process
         	GO:0006996
GO:0033259	GO:0006259	MAH	D	      	plastid DNA replication
         	GO:0006996
GO:0033260	GO:0006259	MAH	D	      	DNA replication during S phase
         	GO:0007049
GO:0033261	GO:0007049	MAH	D	      	regulation of progression through S phase
         	GO:0050789
GO:0033262	GO:0006259	MAH	D	      	regulation of DNA replication during S phase
         	GO:0007049
         	GO:0050789
GO:0033271	GO:0006810	MAH	D	      	myo-inositol phosphate transport
GO:0033272	GO:0006810	MAH	D	      	myo-inositol hexakisphosphate transport
GO:0033273	GO:0007154	MAH	D	      	response to vitamin
         	GO:0009605
GO:0033274	GO:0007154	MAH	D	      	response to vitamin B2
         	GO:0009605
GO:0033275	GO:0006810	MAH	D	      	actin-myosin filament sliding
         	GO:0007010
GO:0033277	GO:0007049	MAH	D	      	abortive mitotic cell cycle
GO:0033278	GO:0007275	MAH	D	      	cell proliferation in midbrain
         	GO:0008283
GO:0033280	GO:0007154	MAH	D	      	response to vitamin D
         	GO:0009605
GO:0033292	GO:0016043	MAH	D	      	T-tubule organization and biogenesis
         	GO:0030154
GO:0033298	GO:0006996	MAH	D	      	contractile vacuole organization and biogenesis
GO:0033299	GO:0016043	MAH	D	      	secretion of lysosomal enzymes
GO:0033301	GO:0007049	MAH	D	      	cell cycle comprising mitosis without cytokinesis
GO:0033302	GO:0005975	MAH	D	      	quercetin O-glucoside metabolic process
GO:0033303	GO:0005975	MAH	D	      	quercetin O-glucoside biosynthetic process
         	GO:0009058
GO:0033304	GO:0019748	MAH	D	      	chlorophyll a metabolic process
GO:0033305	GO:0009058	MAH	D	      	chlorophyll a biosynthetic process
         	GO:0019748
GO:0033306	GO:0008152	MAH	D	      	phytol metabolic process
GO:0033307	GO:0008152	MAH	D	      	phytol salvage
GO:0033308	GO:0006810	MAH	D	      	hydroxyectoine transport
GO:0033310	GO:0009056	MAH	D	      	chlorophyll a catabolic process
         	GO:0019748
GO:0033311	GO:0009058	MAH	D	      	chlorophyll a biosynthetic process via phytyl-PP
         	GO:0019748
GO:0033312	GO:0009058	MAH	D	      	chlorophyll a biosynthetic process via geranylgeranyl-chlorophyll a
         	GO:0019748
GO:0033313	GO:0007049	MAH	D	      	meiotic cell cycle checkpoint
         	GO:0050789
GO:0033314	GO:0006259	MAH	D	      	mitotic cell cycle DNA replication checkpoint
         	GO:0007049
         	GO:0050789
GO:0033315	GO:0006259	MAH	D	      	meiotic cell cycle DNA replication checkpoint
         	GO:0007049
         	GO:0050789
GO:0033316	GO:0007049	MAH	D	      	meiotic spindle checkpoint
         	GO:0050789
GO:0033317	GO:0009058	MAH	D	      	pantothenate biosynthetic process from valine
GO:0033318	GO:0009058	MAH	D	      	pantothenate biosynthetic process from 2-oxypantoyl lactone
GO:0033319	GO:0005975	MAH	D	      	UDP-D-xylose metabolic process
         	GO:0006139
GO:0033320	GO:0005975	MAH	D	      	UDP-D-xylose biosynthetic process
         	GO:0006139
GO:0033321	GO:0006519	MAH	D	      	homomethionine metabolic process
GO:0033322	GO:0006519	MAH	D	      	homomethionine biosynthetic process
GO:0033323	GO:0006519	MAH	D	      	choline biosynthetic process via CDP-choline
         	GO:0009058
GO:0033324	GO:0006519	MAH	D	      	choline biosynthetic process via N-monomethylethanolamine
         	GO:0009058
GO:0033325	GO:0006519	MAH	D	      	choline biosynthetic process via phosphoryl-ethanolamine
         	GO:0009058
GO:0060135	GO:0000003	AI	D	      	maternal process involved in pregnancy
GO:0060136	GO:0000003	AI	D	      	embryonic process involved in female pregnancy
         	GO:0009790
GO:0060137	GO:0000003	AI	D	      	maternal process involved in parturition
GO:0060138	GO:0000003	AI	D	      	fetal process involved in parturition
         	GO:0009790
GO:0060139	GO:0000003	AI	D	      	positive regulation of apoptosis by virus
         	GO:0008219
         	GO:0016032
         	GO:0044403
         	GO:0050789
GO:0060140	GO:0000003	AI	D	      	syncytium formation by plasma membrane fusion of virally targeted cells
         	GO:0016032
         	GO:0016043
         	GO:0044403
GO:0060141	GO:0000003	AI	D	      	positive regulation of cell fusion by virus
         	GO:0016032
         	GO:0016043
         	GO:0044403
         	GO:0050789
GO:0060142	GO:0016043	AI	D	      	regulation of syncytium formation by plasma membrane fusion
         	GO:0050789
GO:0060143	GO:0016043	AI	D	      	positive regulation of syncytium formation by plasma membrane fusion
         	GO:0050789
GO:0060144	GO:0009607	AI	D	      	host cellular processes involved in virus induced gene silencing
         	GO:0044403
GO:0060145	GO:0006139	AI	D	      	viral gene silencing in virus induced gene silencing
         	GO:0009607
         	GO:0040029
         	GO:0044403
GO:0060146	GO:0006139	AI	D	      	host gene silencing in virus induced gene silencing
         	GO:0009607
         	GO:0040029
         	GO:0044403
GO:0060147	GO:0006139	AI	D	      	regulation of posttranscriptional gene silencing
         	GO:0040029
GO:0060148	GO:0006139	AI	D	      	positive regulation of posttranscriptional gene silencing
         	GO:0040029
GO:0060149	GO:0006139	AI	D	      	negative regulation of posttranscriptional gene silencing
         	GO:0040029
GO:0060150	GO:0006139	AI	D	      	viral triggering of virus induced gene silencing
         	GO:0009607
         	GO:0040029
         	GO:0044403
GO:0060151	GO:0016043	AI	D	      	peroxisome localization
GO:0060152	GO:0007010	AI	D	      	microtubule-based peroxisome localization
GO:0060153	GO:0000003	AI	D	      	viral process regulating host cell cycle
         	GO:0007049
         	GO:0016032
         	GO:0044403
         	GO:0050789
GO:0060154	GO:0000003	AI	D	      	cellular process regulating host cell cycle in response to virus
         	GO:0007049
         	GO:0009607
         	GO:0016032
         	GO:0044403
         	GO:0050789


Term name changes in biological_process ontology
GO:0006267: pre-replicative complex formation --> pre-replicative complex assembly
GO:0006294: nucleotide-excision repair, preincision complex formation --> nucleotide-excision repair, preincision complex assembly
GO:0006324: S-phase regulated histone modification --> S-phase-specific histone modification
GO:0006624: vacuolar protein processing or maturation --> vacuolar protein processing
GO:0007093: mitotic checkpoint --> mitotic cell cycle checkpoint
GO:0007094: mitotic spindle checkpoint --> mitotic cell cycle spindle assembly checkpoint
GO:0007095: mitotic G2 checkpoint --> mitotic cell cycle G2/M transition DNA damage checkpoint
GO:0007172: signal complex formation --> signal complex assembly
GO:0007293: egg chamber formation (sensu Insecta) --> germarium-derived egg chamber formation
GO:0007294: oocyte fate determination (sensu Insecta) --> germarium-derived oocyte fate determination
GO:0007295: egg chamber growth (sensu Insecta) --> growth of a germarium-derived egg chamber
GO:0007300: nurse cell to oocyte transport (sensu Insecta) --> ovarian nurse cell to oocyte transport
GO:0007304: eggshell formation (sensu Insecta) --> chorion-containing eggshell formation
GO:0007305: vitelline membrane formation (sensu Insecta) --> vitelline membrane formation in chorion-containing eggshell
GO:0007306: insect chorion formation --> eggshell chorion formation
GO:0007307: chorion gene amplification --> eggshell chorion gene amplification
GO:0007565: pregnancy --> female pregnancy
GO:0009249: protein-lipoylation --> protein lipoylation
GO:0010264: phytate biosynthetic process --> myo-inositol hexakisphosphate biosynthetic process
GO:0017055: negative regulation of transcriptional preinitiation complex formation --> negative regulation of transcriptional preinitiation complex assembly
GO:0018060: N-terminal peptidyl-cysteine acid deamination --> N-terminal peptidyl-cysteine deamination
GO:0030381: eggshell pattern formation (sensu Insecta) --> chorion-containing eggshell pattern formation
GO:0030706: oocyte differentiation (sensu Insecta) --> germarium-derived oocyte differentiation
GO:0030708: female germ-line cyst encapsulation (sensu Insecta) --> germarium-derived female germ-line cyst encapsulation
GO:0030715: oocyte growth (sensu Insecta) --> oocyte growth in germarium-derived egg chamber
GO:0030720: oocyte localization during oogenesis --> oocyte localization during germarium-derived egg chamber formation
GO:0030727: female germ-line cyst formation (sensu Insecta) --> germarium-derived female germ-line cyst formation
GO:0031578: spindle orientation checkpoint --> mitotic cell cycle spindle orientation checkpoint
GO:0045898: regulation of transcriptional preinitiation complex formation --> regulation of transcriptional preinitiation complex assembly
GO:0045899: positive regulation of transcriptional preinitiation complex formation --> positive regulation of transcriptional preinitiation complex assembly
GO:0045977: positive regulation of mitotic cell cycle, embryonic --> positive regulation of progression through embryonic mitotic cell cycle
GO:0048142: cystoblast division (sensu Insecta) --> germarium-derived cystoblast division
GO:0048158: oogonium stage, oogenesis (sensu Mammalia) --> oogonium stage, oogenesis
GO:0048160: primary follicle stage, oogenesis (sensu Mammalia) --> primary follicle stage, oogenesis
GO:0048161: double layer follicle stage, oogenesis (sensu Mammalia) --> double layer follicle stage, oogenesis
GO:0048162: multi-layer follicle stage, oogenesis (sensu Mammalia) --> multi-layer follicle stage, oogenesis
GO:0048163: scattered antral spaces stage, oogenesis (sensu Mammalia) --> scattered antral spaces stage, oogenesis
GO:0048164: distinct antral spaces stage, oogenesis (sensu Mammalia) --> distinct antral spaces stage, oogenesis
GO:0048165: fused antrum stage, oogenesis (sensu Mammalia) --> fused antrum stage, oogenesis
GO:0048166: mature follicle stage, oogenesis (sensu Mammalia) --> mature follicle stage, oogenesis
GO:0051123: transcriptional preinitiation complex formation --> transcriptional preinitiation complex assembly


New definitions for biological_process ontology terms (20 new definitions)
GO:0006324, S-phase-specific histone modification
GO:0006465, signal peptide processing
GO:0006475, internal protein amino acid acetylation
GO:0006482, protein amino acid demethylation
GO:0006609, mRNA-binding (hnRNP) protein import into nucleus
GO:0006624, vacuolar protein processing
GO:0006642, triacylglycerol mobilization
GO:0006753, nucleoside phosphate metabolic process
GO:0009249, protein lipoylation
GO:0018020, peptidyl-glutamic acid methylation
GO:0018073, protein amino acid bromination
GO:0018246, protein-coenzyme A linkage
GO:0018309, protein-FMN linkage
GO:0018364, peptidyl-glutamine methylation
GO:0018393, internal peptidyl-lysine acetylation
GO:0019617, protocatechuate catabolic process, meta-cleavage
GO:0019618, protocatechuate catabolic process, ortho-cleavage
GO:0022400, regulation of rhodopsin mediated signaling
GO:0022603, regulation of anatomical structure morphogenesis
GO:0043695, detection of pheromone


New term merges in biological_process ontology
GO:0048110 has been merged into GO:0007308, oocyte construction
GO:0048111 has been merged into GO:0007309, oocyte axis determination
GO:0048112 has been merged into GO:0007314, oocyte anterior/posterior axis determination
GO:0048113 has been merged into GO:0007315, pole plasm assembly
GO:0048123 has been merged into GO:0007310, oocyte dorsal/ventral axis determination
GO:0048124 has been merged into GO:0007311, maternal determination of dorsal/ventral axis, oocyte, germ-line encoded
GO:0048125 has been merged into GO:0007313, maternal determination of dorsal/ventral axis, oocyte, soma encoded
GO:0048126 has been merged into GO:0030722, establishment of oocyte nucleus localization during oocyte axis determination
GO:0048127 has been merged into GO:0042070, maintenance of oocyte nucleus localization during oocyte axis determination
GO:0048128 has been merged into GO:0007312, oocyte nucleus migration during oocyte axis determination
GO:0048129 has been merged into GO:0008103, oocyte microtubule cytoskeleton polarization
GO:0048130 has been merged into GO:0016325, oocyte microtubule cytoskeleton organization
GO:0048141 has been merged into GO:0048132, female germ-line stem cell division
GO:0048157 has been merged into GO:0048477, oogenesis
GO:0051662 has been merged into GO:0051663, oocyte nucleus localization during oocyte axis determination


Term movements in biological_process ontology:
Terms movements under GO Slim term 'reproduction ; GO:0000003'
- GO:0000744, karyogamy during conjugation without cellular fusion
- GO:0000745, nuclear migration during conjugation without cellular fusion
- GO:0000748, conjugation with mutual genetic exchange
- GO:0000756, response to pheromone during conjugation without cellular fusion
- GO:0000757, signal transduction during conjugation without cellular fusion
- GO:0000758, agglutination during conjugation without cellular fusion
- GO:0000759, cellular morphogenesis during conjugation without cellular fusion
- GO:0000760, adaptation to pheromone during conjugation without cellular fusion
- GO:0000761, conjugant formation
- GO:0006926, virus-infected cell apoptosis

Terms movements under GO Slim term 'nucleobase, nucleoside, nucleotide and nucleic acid metabolic process ; GO:0006139'
- GO:0009616, virus induced gene silencing
- GO:0051214, RNA virus induced gene silencing
- GO:0051215, DNA virus induced gene silencing

Terms movements under GO Slim term 'cell cycle ; GO:0007049'
+ GO:0006324, S-phase-specific histone modification
- GO:0019055, modification by virus of host cell cycle regulation
- GO:0046792, suppression by virus of host cell cycle arrest

Terms movements under GO Slim term 'cell communication ; GO:0007154'
+ GO:0000756, response to pheromone during conjugation without cellular fusion
+ GO:0000758, agglutination during conjugation without cellular fusion
+ GO:0000759, cellular morphogenesis during conjugation without cellular fusion

Terms movements under GO Slim term 'biological_process ; GO:0008150'
+ GO:0000748, conjugation with mutual genetic exchange
+ GO:0000761, conjugant formation

Terms movements under GO Slim term 'anatomical structure morphogenesis ; GO:0009653'
- GO:0030704, vitelline membrane formation

Terms movements under GO Slim term 'viral reproduction ; GO:0016032'
- GO:0006926, virus-infected cell apoptosis

Terms movements under GO Slim term 'cellular component organization and biogenesis ; GO:0016043'
- GO:0006948, induction by virus of cell-cell fusion in host
+ GO:0017055, negative regulation of transcriptional preinitiation complex assembly
+ GO:0045898, regulation of transcriptional preinitiation complex assembly
+ GO:0045899, positive regulation of transcriptional preinitiation complex assembly
+ GO:0051123, transcriptional preinitiation complex assembly

Terms movements under GO Slim term 'regulation of gene expression, epigenetic ; GO:0040029'
- GO:0009616, virus induced gene silencing
- GO:0051214, RNA virus induced gene silencing
- GO:0051215, DNA virus induced gene silencing

Terms movements under GO Slim term 'symbiosis, encompassing mutualism through parasitism ; GO:0044403'
- GO:0006926, virus-infected cell apoptosis

Terms movements under GO Slim term 'regulation of biological process ; GO:0050789'
- GO:0019055, modification by virus of host cell cycle regulation
+ GO:0022400, regulation of rhodopsin mediated signaling
- GO:0046792, suppression by virus of host cell cycle arrest



New terms in cellular_component ontology (18 new terms)
GO:0033254	GO:0005737	MAH	D	      	vacuolar transporter chaperone complex
         	GO:0043234
GO:0033255	GO:0005654	MAH	D	      	SAS acetyltransferase complex
         	GO:0043234
GO:0033256	GO:0005622	MAH	D	      	I-kappaB/NF-kappaB complex
         	GO:0043234
GO:0033257	GO:0005622	MAH	D	      	Bcl3/NF-kappaB2 complex
         	GO:0043234
GO:0033263	GO:0005768	MAH	D	      	CORVET complex
         	GO:0043234
GO:0033267	GO:0005623	MAH	D	      	axon part
GO:0033268	GO:0005623	MAH	D	      	node of Ranvier
GO:0033269	GO:0005623	MAH	D	      	internode region of axon
GO:0033270	GO:0005623	MAH	D	      	paranode region of axon
GO:0033276	GO:0005654	MAH	D	      	transcription factor TFTC complex
         	GO:0043234
GO:0033279	GO:0005840	MAH	D	1733770	ribosomal subunit
GO:0033281	GO:0005886	MAH	D	1550371	TAT protein translocation system complex
         	GO:0043234
GO:0033282	GO:0005764	MAH	D	      	protein C inhibitor-acrosin complex
         	GO:0043234
GO:0033289	GO:0005856	MAH	D	      	intraconoid microtubule
GO:0033290	GO:0005737	MAH	D	1738124	eukaryotic 48S preinitiation complex
         	GO:0043234
GO:0033291	GO:0005737	MAH	D	1738124	eukaryotic 80S initiation complex
         	GO:0043234
GO:0033309	GO:0005654	MAH	D	      	SBF transcription complex
         	GO:0043234
GO:0043769	GO:0005694	JL	D	      	telomere binding complex


Term name changes in cellular_component ontology
GO:0008180: signalosome complex --> signalosome
GO:0030119: membrane coat adaptor complex --> AP-type membrane coat adaptor complex


New definitions for cellular_component ontology terms (10 new definitions)
GO:0009380, excinuclease ABC complex
GO:0015627, type II protein secretion system complex
GO:0016008, major mitochondrial derivative
GO:0016009, minor mitochondrial derivative
GO:0016935, glycine-gated chloride channel complex
GO:0017053, transcriptional repressor complex
GO:0017054, negative cofactor 2 complex
GO:0017071, intracellular cyclic nucleotide activated cation channel complex
GO:0019183, histamine-gated chloride channel complex
GO:0020032, basal ring of apical complex


Term movements in cellular_component ontology:
Terms movements under GO Slim term 'intracellular ; GO:0005622'
- GO:0031422, RecQ helicase-Topo III complex

Terms movements under GO Slim term 'chromosome ; GO:0005694'
+ GO:0031422, RecQ helicase-Topo III complex

Terms movements under GO Slim term 'protein complex ; GO:0043234'
- GO:0000311, plastid large ribosomal subunit
- GO:0000315, organellar large ribosomal subunit
- GO:0005762, mitochondrial large ribosomal subunit
- GO:0005842, cytosolic large ribosomal subunit (sensu Eukaryota)
- GO:0009282, cytosolic large ribosomal subunit (sensu Bacteria)
- GO:0015934, large ribosomal subunit
- GO:0030872, cytosolic large ribosomal subunit (sensu Archaea)



New terms in molecular_function ontology (101 new terms)
GO:0033224	GO:0005215	MAH	D	      	2-aminoethylphosphonate transporter activity
GO:0033225	GO:0005215	MAH	D	      	2-aminoethylphosphonate transporting ATPase activity
         	GO:0016787
GO:0033226	GO:0005488	MAH	D	      	2-aminoethylphosphonate binding
GO:0033229	GO:0005215	MAH	D	1723526	cysteine transporter activity
GO:0033230	GO:0005215	MAH	D	1723526	cysteine-transporting ATPase activity
         	GO:0016787
GO:0033232	GO:0005215	MAH	D	1723608	D-methionine-transporting ATPase activity
         	GO:0016787
GO:0033236	GO:0003824	MAH	D	      	11-beta-hydroxysteroid dehydrogenase (NAD+) activity
GO:0033237	GO:0003824	MAH	D	      	11-beta-hydroxysteroid dehydrogenase (NADP+) activity
GO:0033250	GO:0016787	MAH	D	      	penicillinase activity
GO:0033251	GO:0016787	MAH	D	      	cephalosporinase activity
GO:0033264	GO:0008233	MAH	D	      	bontoxilysin activity
GO:0033265	GO:0005488	MAH	D	      	choline binding
GO:0033266	GO:0005215	MAH	D	      	choline-transporting ATPase activity
         	GO:0016787
GO:0033283	GO:0005215	MAH	D	      	organic acid-transporting ATPase activity
         	GO:0016787
GO:0033284	GO:0005215	MAH	D	      	carboxylic acid-transporting ATPase activity
         	GO:0016787
GO:0033285	GO:0005215	MAH	D	      	monocarboxylic acid-transporting ATPase activity
         	GO:0016787
GO:0033286	GO:0005215	MAH	D	      	ectoine-transporting ATPase activity
         	GO:0016787
GO:0033287	GO:0005215	MAH	D	      	hydroxyectoine transporter activity
GO:0033288	GO:0005215	MAH	D	      	hydroxyectoine-transporting ATPase activity
         	GO:0016787
GO:0033293	GO:0005488	MAH	D	      	monocarboxylic acid binding
GO:0033294	GO:0005488	MAH	D	      	ectoine binding
GO:0033295	GO:0005488	MAH	D	      	hydroxyectoine binding
GO:0033296	GO:0030246	MAH	D	      	rhamnose binding
GO:0033297	GO:0005215	MAH	D	      	rhamnose-transporting ATPase activity
         	GO:0016787
GO:0033300	GO:0005215	MAH	D	      	dehydroascorbic acid transporter activity
GO:0043733	GO:0016787	JL	D	      	DNA-3-methyladenine glycosylase III activity
GO:0043734	GO:0003824	JL	D	      	DNA-N1-methyladenine dioxygenase activity
GO:0043735	GO:0003824	JL		      	delta-9 acyl-phospholipid desaturase activity
GO:0043736	GO:0016787	JL	D	      	DNA-3-methyladenine glycosylase IV activity
GO:0043737	GO:0004518	JL	D	      	deoxyribonuclease V activity
GO:0043738	GO:0003824	JL	D	      	F420H2 dehydrogenase activity
GO:0043739	GO:0016787	JL	D	      	G/U mismatch-specific uracil-DNA glycosylase activity
GO:0043740	GO:0016787	JL	D	      	GTP cyclohydrolase IIa activity
GO:0043741	GO:0016740	JL	D	      	L-2-aminoadipate N-acetyltransferase activity
GO:0043742	GO:0016740	JL	D	      	LL-diaminopimelate aminotransferase activity
GO:0043743	GO:0016740	JL	D	      	LPPG:FO 2-phospho-L-lactate transferase activity
GO:0043744	GO:0016740	JL	D	      	N2-acetyl-L-aminoadipate kinase activity
GO:0043745	GO:0003824	JL	D	      	N2-acetyl-L-aminoadipate semialdehyde dehydrogenase activity
GO:0043746	GO:0016740	JL	D	      	N2-acetyl-L-lysine aminotransferase activity
GO:0043747	GO:0016787	JL	D	      	N2-acetyl-L-lysine deacetylase activity
GO:0043748	GO:0003824	JL	D	      	O-succinylbenzoate synthase activity
GO:0043749	GO:0016740	JL	D	      	phenol, water dikinase activity
GO:0043750	GO:0016740	JL	D	      	phosphatidylinositol alpha-mannosyltransferase activity
GO:0043751	GO:0016740	JL	D	      	polyphosphate:AMP phosphotransferase activity
GO:0043752	GO:0016740	JL	D	      	adenosylcobinamide kinase activity
GO:0043753	GO:0016740	JL	D	      	adenosylcobinamide-phosphate guanylyltransferase activity
GO:0043754	GO:0016740	JL	D	      	dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity
GO:0043755	GO:0016787	JL	D	      	alpha-ribazole phosphatase activity
GO:0043756	GO:0016787	JL	D	      	adenosylcobinamide hydrolase activity
GO:0043757	GO:0003824	JL	D	      	adenosylcobinamide-phosphate synthase activity
GO:0043758	GO:0003824	JL	D	      	acetate-CoA ligase (ADP-forming) activity
GO:0043759	GO:0003824	JL	D	      	branched-chain acyl-CoA synthetase (ADP-forming) activity
GO:0043760	GO:0016740	JL	D	      	acetyldiaminopimelate aminotransferase activity
GO:0043761	GO:0016740	JL	D	      	archaetidylserine synthase activity
GO:0043762	GO:0003824	JL	D	      	aryl-CoA synthetase (ADP-forming) activity
GO:0043763	GO:0030234	JL	D	      	UTP:glucose-1-phosphate uridylyltransferase regulator activity
GO:0043764	GO:0016740	JL	D	      	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase activity
GO:0043765	GO:0004518	JL	D	      	T/G mismatch-specific endonuclease activity
GO:0043766	GO:0016740	JL	D	      	Sep-tRNA:Cys-tRNA synthase activity
GO:0043767	GO:0003824	JL	D	      	pyrrolysyl-tRNA synthetase activity
GO:0043768	GO:0003824	JL	D	      	S-ribosylhomocysteine lyase activity
GO:0043770	GO:0016740	JL	D	      	demethylmenaquinone methyltransferase activity
GO:0043771	GO:0016740	JL	D	      	cytidine kinase activity
GO:0043772	GO:0016740	JL	D	      	acyl-phosphate glycerol-3-phosphate acyltransferase activity
GO:0043773	GO:0003824	JL	D	      	coenzyme F420-0 gamma-glutamyl ligase activity
GO:0043774	GO:0003824	JL	D	      	coenzyme F420-2 alpha-glutamyl ligase activity
GO:0043775	GO:0003824	JL	D	      	cobyrinate a,c-diamide synthase activity
GO:0043776	GO:0016740	JL	D	      	cobalt-precorrin-6B C5-methyltransferase activity
GO:0043777	GO:0016740	JL	D	      	cobalt-precorrin-7 C15-methyltransferase activity
GO:0043778	GO:0003824	JL	D	      	cobalt-precorrin-8 methylmutase activity
GO:0043779	GO:0003824	JL	D	      	cobalt-precorrin-5A acetaldehyde-lyase activity
GO:0043780	GO:0016740	JL	D	      	cobalt-precorrin-5B C1-methyltransferase activity
GO:0043781	GO:0016740	JL	D	      	cobalt-factor II C20-methyltransferase activity
GO:0043782	GO:0016740	JL	D	      	cobalt-precorrin-3 C17-methyltransferase activity
GO:0043783	GO:0003824	JL	D	      	oxidoreductase activity, oxidizing metal ions with flavin as acceptor
GO:0043784	GO:0003824	JL	D	      	cob(II)yrinic acid a,c-diamide reductase activity
GO:0043785	GO:0016740	JL	D	      	cinnamoyl-CoA:phenyllactate CoA-transferase activity
GO:0043786	GO:0003824	JL	D	      	cinnamate reductase activity
GO:0043787	GO:0016740	JL	D	      	chlorophyll synthase activity
GO:0043788	GO:0016740	JL	D	      	cardiolipin synthetase 2 activity
GO:0043789	GO:0003824	JL	D	      	diguanylate cyclase activity
GO:0043790	GO:0016740	JL	D	      	dimethyladenosine transferase activity
GO:0043791	GO:0016740	JL	D	      	dimethylamine-coenzyme M methyltransferase activity
GO:0043792	GO:0016787	JL	D	      	enamidase activity
GO:0043793	GO:0003824	JL	D	      	beta-ribofuranosylaminobenzene 5'-phosphate synthase activity
GO:0043794	GO:0003824	JL	D	      	formate dehydrogenase (F420) activity
GO:0043795	GO:0003824	JL	D	      	glyceraldehyde oxidoreductase activity
GO:0043796	GO:0003824	JL	D	      	glyceraldehyde dehydrogenase (NADP) activity
GO:0043797	GO:0003824	JL	D	      	glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) activity
GO:0043798	GO:0003824	JL	D	      	glycerate 2-kinase activity
GO:0043799	GO:0003824	JL	D	      	glycine oxidase activity
GO:0043800	GO:0003824	JL	D	      	hexulose-6-phosphate isomerase activity
GO:0043801	GO:0003824	JL	D	      	hexulose-6-phosphate synthase activity
GO:0043802	GO:0003824	JL	D	      	hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) activity
GO:0043803	GO:0016740	JL	D	      	hydroxyneurosporene-O-methyltransferase activity
GO:0043804	GO:0016787	JL	D	      	imidazolone hydrolase activity
GO:0043805	GO:0003824	JL	D	      	indolepyruvate ferredoxin oxidoreductase activity
GO:0043806	GO:0016740	JL	D	      	keto acid formate lyase activity
GO:0043807	GO:0003824	JL	D	      	3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity
GO:0043808	GO:0016740	JL	D	      	lyso-ornithine lipid acyltransferase activity
GO:0043809	GO:0003824	JL	D	      	methylthioribulose 1-phosphate dehydratase activity


Term name changes in molecular_function ontology
GO:0001671: ATPase stimulator activity --> ATPase activator activity
GO:0004345: glucose-6-phosphate 1-dehydrogenase activity --> glucose-6-phosphate dehydrogenase activity
GO:0004499: dimethylaniline monooxygenase (N-oxide-forming) activity --> flavin-containing monooxygenase activity
GO:0004794: threonine ammonia-lyase activity --> L-threonine ammonia-lyase activity
GO:0018860: anthranilate--CoA ligase activity --> anthranilate-CoA ligase activity
GO:0046481: UDP-galactose:MGDG galactosyltransferase activity --> digalactosyldiacylglycerol synthase
GO:0047787: cortisone beta-reductase activity --> delta4-3-oxosteroid 5beta-reductase activity


New definitions for molecular_function ontology terms (16 new definitions)
GO:0001512, dihydronicotinamide riboside quinone reductase activity
GO:0003726, double-stranded RNA adenosine deaminase activity
GO:0004176, ATP-dependent peptidase activity
GO:0004553, hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004712, protein threonine/tyrosine kinase activity
GO:0008251, tRNA specific adenosine deaminase activity
GO:0008849, enterochelin esterase activity
GO:0016211, ammonia ligase activity
GO:0016800, hydrolase activity, hydrolyzing S-glycosyl compounds
GO:0016833, oxo-acid-lyase activity
GO:0016876, ligase activity, forming aminoacyl-tRNA and related compounds
GO:0016878, acid-thiol ligase activity
GO:0016880, acid-ammonia (or amide) ligase activity
GO:0016881, acid-amino acid ligase activity
GO:0017171, serine hydrolase activity
GO:0045330, aspartyl esterase activity


New term merges in molecular_function ontology
GO:0000507 has been merged into GO:0047184, 1-acylglycerophosphocholine O-acyltransferase activity
GO:0004426 has been merged into GO:0004833, tryptophan 2,3-dioxygenase activity
GO:0004759 has been merged into GO:0004091, carboxylesterase activity
GO:0008560 has been merged into GO:0008559, xenobiotic-transporting ATPase activity
GO:0016789 has been merged into GO:0004091, carboxylesterase activity
GO:0047076 has been merged into GO:0004499, flavin-containing monooxygenase activity
GO:0047226 has been merged into GO:0047273, galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity
GO:0047477 has been merged into GO:0047747, cholate-CoA ligase activity
GO:0047752 has been merged into GO:0047787, delta4-3-oxosteroid 5beta-reductase activity



SourceForge items closed this month:

SF id	Resolution	SF item title	GO ids added, if any
1499218	Fixed	response to wounding --jasmonic acid	
1578969	Works For Me	relationship between exodeoxyribonuclease"  and phosphodies	
1694228	Works For Me	inner endospore membrane	
1723076	Fixed	definition problem with 11beta-HSD activity	
1723691	None	conjugation parents	
1723713	None	GO:0007619-courtship behavior	
1724273	Accepted	add synonyms	
1724311	Accepted	ntr:  penicillin catabolism regulation	
1724378	Accepted	penicillinase/cephalosporinase	
1724748	Accepted	missing parent mitochondrial processing peptidase activity	
1728084	Accepted	NTR: Vacuolar transporter chaperone complex	
1728087	Accepted	NTR: SAS acetyltransferase complex	
1728275	Fixed	cell cycle problems - cytokinesis not part_of mitosis	
1728276	Fixed	cell cycle problems - ‘mitotic G2 checkpoint’ is a misnomer	
1728279	Fixed	cell cycle problems - ‘mitotic checkpoint’ definition	
1728282	Accepted	cell cycle new term request: plastid DNA replication	
1728285	Fixed	rename ‘positive regulation of mitotic cell cycle, embryonic	
1728287	Fixed	cell cycle problems - ‘DNA replication’ part_of ‘S phase’	
1728294	Fixed	cell cycle problems - ‘regulation of DNA replication’ parent	
1728301	Fixed	cell cycle problems - ‘cell division’	
1728302	Works For Me	cell cycle problems - missing children of ‘cytokinesis’	
1728308	Accepted	abortive mitosis, mitosis without cytokinesis	
1728531	None	virus induced gene silencing	
1728542	Accepted	ntr: CORVET complex	
1729057	Fixed	problems with nucleoside transport process term placements	
1729186	Accepted	NTR: actin filament sliding	
1730588	Works For Me	query parentage	
1730751	None	ntr: peroxisome localization	
1730884	Accepted	bontoxilysin activity	
1730894	Accepted	choline binding and transport	
1731073	Accepted	node of Ranvier	
1731309	Accepted	RG: BCL3-NKFB2 Complex	
1731477	Accepted	transcription factor TFTC complex	
1731807	Accepted	phytate transport	
1732046	None	GO:0019055 modification by virus of host cell cycle regulati	
1732165	Duplicate	response to vitamin, response to vitamin B2	
1732217	Accepted	response to vitamin, response to vitamin B2	
1732829	Accepted	synonym for glutathione-disulfide reductase activity	
1732993	Accepted	new term: cell proliferation in midbrain	
1734034	Fixed	cell wall catabolic process missing parent	
1734036	Works For Me	missing parent mating-type switching	
1734110	Works For Me	tubulin folding parent	
1737340	Works For Me	MF term for peptidyl-arginine ADP-ribosylation activity	
1738075	Accepted	response to vitamin D	
1738098	Accepted	can we have "symbiosis" as a synonym for GO:0044403	
1739038	Fixed	ATPase stimulator activity	
1739952	Accepted	EC change of name for reaction	
1740280	Accepted	additional parentage for sarcolemma	
1740879	Accepted	ref genome; T-tubule development	
1741053	Works For Me	membrane coat terms	
1741185	Accepted	ectoine-transporting ATPase activity	
1741376	Accepted	apical complex terms	
1741776	Accepted	ectoine binding activity	
1741792	Accepted	ntr:  rhamnose transporter/binding terms	
1742904	Accepted	ntr: contractile vacuole organization and biogenesis	
1742917	Accepted	ntr: secretion of lysosomal enzymes	
1743034	Accepted	dehydroascorbate transporter activity	
1743040	Accepted	better definition for GO:0015229	
1743737	Accepted	ntr:  hydroxyectoine transport	
1744029	Accepted	ntr: SBF transcription complex	
1744717	Accepted	RecQ helicase-Topo III complex poss parent	



Statistics:
biological_process: 14076 terms, 98.8% defined (13914 terms defined)
cellular_component: 2098 terms, 100.0% defined (2098 terms defined)
molecular_function: 8234 terms, 93.4% defined (7689 terms defined)
Total: 24408 terms, 97.1% defined (23701 terms defined)


Term errors
none