! parsing: GO:0000079 ! parse: GO:0000079 using "regulation of CDK activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004693]) [-2] ! parse: GO:0000079 using "regulation of cyclin-dependent protein kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004693]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of CDK activity." ! PROPOSED: biological regulation that OBO_REL:regulates cyclin-dependent protein kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004693])] [Term] id: GO:0000079 ! regulation of cyclin-dependent protein kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004693 ! cyclin-dependent protein kinase activity synonym: "biological regulation of CDK activity" EXACT [OBOL:automatic] synonym: "biological regulation of CDK, catalytic subunit activity" EXACT [OBOL:automatic] synonym: "biological regulation of cyclin-dependent protein kinase activity" EXACT [OBOL:automatic] synonym: "biological regulation of cyclin-dependent protein kinase, intrinsic catalyst activity" EXACT [OBOL:automatic] synonym: "regulation of CDK, catalytic subunit activity" EXACT [OBOL:automatic] synonym: "regulation of cyclin-dependent protein kinase, intrinsic catalyst activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000079: 0.59 ! parsing: GO:0000167 ! Already have xp for: GO:0000167 activation of MAPKKK activity during osmolarity sensing ! CURRENT : activation of MAPKKK activity that OBO_REL:part_of osmosensory signaling pathway [cdef(GO:0000185, [OBO_REL:part_of=GO:0007231])] ! parsing: GO:0000168 ! Already have xp for: GO:0000168 activation of MAPKK activity during osmolarity sensing ! CURRENT : activation of MAPKK activity that OBO_REL:part_of osmosensory signaling pathway [cdef(GO:0000186, [OBO_REL:part_of=GO:0007231])] ! parsing: GO:0000169 ! Already have xp for: GO:0000169 activation of MAPK activity during osmolarity sensing ! CURRENT : activation of MAPK activity that OBO_REL:part_of osmosensory signaling pathway [cdef(GO:0000187, [OBO_REL:part_of=GO:0007231])] ! parsing: GO:0000173 ! Already have xp for: GO:0000173 inactivation of MAPK activity during osmolarity sensing ! CURRENT : inactivation of MAPK activity that OBO_REL:part_of osmosensory signaling pathway [cdef(GO:0000188, [OBO_REL:part_of=GO:0007231])] ! parsing: GO:0000185 ! No parse for: GO:0000185 activation of MAPKKK activity ! parsing: GO:0000186 ! No parse for: GO:0000186 activation of MAPKK activity ! parsing: GO:0000187 ! No parse for: GO:0000187 activation of MAPK activity ! parsing: GO:0000188 ! No parse for: GO:0000188 inactivation of MAPK activity ! parsing: GO:0000197 ! Already have xp for: GO:0000197 activation of MAPKKK activity during cell wall biogenesis ! CURRENT : activation of MAPKKK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000185, [OBO_REL:part_of=GO:0042546])] ! parsing: GO:0000198 ! Already have xp for: GO:0000198 activation of MAPKK activity during cell wall biogenesis ! CURRENT : activation of MAPKK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000186, [OBO_REL:part_of=GO:0042546])] ! parsing: GO:0000199 ! Already have xp for: GO:0000199 activation of MAPK activity during cell wall biogenesis ! CURRENT : activation of MAPK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000187, [OBO_REL:part_of=GO:0042546])] ! parsing: GO:0000200 ! Already have xp for: GO:0000200 inactivation of MAPK activity during cell wall biogenesis ! CURRENT : inactivation of MAPK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000188, [OBO_REL:part_of=GO:0042546])] ! parsing: GO:0002032 ! No parse for: GO:0002032 arrestin mediated desensitization of G-protein coupled receptor protein signaling pathway ! parsing: GO:0006469 ! parse: GO:0006469 using "negative regulation of protein kinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004672]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates protein kinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004672])] [Term] id: GO:0006469 ! negative regulation of protein kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004672 ! protein kinase activity synonym: "negative biological regulation of protein kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006469: 1.09 ! parsing: GO:0006588 ! No parse for: GO:0006588 tryptophan hydroxylase activation ! parsing: GO:0006919 ! No parse for: GO:0006919 caspase activation ! parsing: GO:0006987 ! No parse for: GO:0006987 unfolded protein response, activation of signaling protein activity ! parsing: GO:0007092 ! Already have xp for: GO:0007092 anaphase-promoting complex activation during mitotic cell cycle ! CURRENT : anaphase-promoting complex activation that OBO_REL:part_of mitosis [cdef(GO:0051488, [OBO_REL:part_of=GO:0007067])] ! parsing: GO:0007171 ! No parse for: GO:0007171 transmembrane receptor protein tyrosine kinase activation (dimerization) ! parsing: GO:0007190 ! No parse for: GO:0007190 adenylate cyclase activation ! parsing: GO:0007194 ! parse: GO:0007194 using "negative regulation of adenylate cyclase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004016]) [-2] ! parse: GO:0007194 using "negative regulation of adenylyl cyclase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004016]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates adenylate cyclase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004016])] [Term] id: GO:0007194 ! negative regulation of adenylate cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004016 ! adenylate cyclase activity synonym: "negative biological regulation of adenylate cyclase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of adenylyl cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007194: 1.4 ! parsing: GO:0007202 ! No parse for: GO:0007202 phospholipase C activation ! parsing: GO:0007205 ! No parse for: GO:0007205 protein kinase C activation ! parsing: GO:0007250 ! parse: GO:0007250 using "positive regulation of NF-kappaB-inducing kinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004704]) [-2] ! no existing xp def ! def: "The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues." ! PROPOSED: biological regulation that OBO_REL:positively_regulates NF-kappaB-inducing kinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004704])] [Term] id: GO:0007250 ! activation of NF-kappaB-inducing kinase intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004704 ! NF-kappaB-inducing kinase activity synonym: "positive biological regulation of NF-kappaB-inducing kinase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of NIK" EXACT [OBOL:automatic] synonym: "positive regulation of NIK" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007250: 0.71 ! parsing: GO:0007256 ! No parse for: GO:0007256 activation of JNKK activity ! parsing: GO:0007257 ! No parse for: GO:0007257 activation of JNK activity ! parsing: GO:0008635 ! No parse for: GO:0008635 caspase activation via cytochrome c ! parsing: GO:0008636 ! Already have xp for: GO:0008636 caspase activation via phosphorylation ! CURRENT : caspase activation that OBO_REL:regulated_by phosphorylation [cdef(GO:0006919, [OBO_REL:regulated_by=GO:0016310])] ! parsing: GO:0010359 ! parse: GO:0010359 using "regulation of anion channel activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0005253]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of anion channel activity." ! PROPOSED: biological regulation that OBO_REL:regulates anion channel activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0005253])] [Term] id: GO:0010359 ! regulation of anion channel activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0005253 ! anion channel activity synonym: "biological regulation of anion channel activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010359: 0.29 ! parsing: GO:0010360 ! parse: GO:0010360 using "negative regulation of anion channel activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005253]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate, or extent of the anion channel activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates anion channel activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005253])] [Term] id: GO:0010360 ! negative regulation of anion channel activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0005253 ! anion channel activity synonym: "negative biological regulation of anion channel activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010360: 0.31 ! parsing: GO:0010361 ! No parse for: GO:0010361 regulation by blue light of anion channel activity ! parsing: GO:0010362 ! No parse for: GO:0010362 negative regulation by blue light of anion channel activity ! parsing: GO:0022898 ! parse: GO:0022898 using "regulation of transmembrane transporter activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0022857]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of transmembrane transporter activity." ! PROPOSED: biological regulation that OBO_REL:regulates transmembrane transporter activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0022857])] [Term] id: GO:0022898 ! regulation of transmembrane transporter activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0022857 ! transmembrane transporter activity synonym: "biological regulation of transmembrane transporter activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022898: 0.28 ! parsing: GO:0030845 ! No parse for: GO:0030845 phospholipase C inhibition ! parsing: GO:0031279 ! parse: GO:0031279 using "regulation of cyclase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0009975]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of cyclase activity." ! PROPOSED: biological regulation that OBO_REL:regulates cyclase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0009975])] [Term] id: GO:0031279 ! regulation of cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0009975 ! cyclase activity synonym: "biological regulation of cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031279: 0.29 ! parsing: GO:0031280 ! parse: GO:0031280 using "negative regulation of cyclase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0009975]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of a cyclase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates cyclase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0009975])] [Term] id: GO:0031280 ! negative regulation of cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0009975 ! cyclase activity synonym: "negative biological regulation of cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031280: 1.08 ! parsing: GO:0031281 ! parse: GO:0031281 using "positive regulation of cyclase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0009975]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of a cyclase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates cyclase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0009975])] [Term] id: GO:0031281 ! positive regulation of cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0009975 ! cyclase activity synonym: "positive biological regulation of cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031281: 1.08 ! parsing: GO:0031282 ! parse: GO:0031282 using "regulation of guanylate cyclase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004383]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of guanylate cyclase activity." ! PROPOSED: biological regulation that OBO_REL:regulates guanylate cyclase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004383])] [Term] id: GO:0031282 ! regulation of guanylate cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004383 ! guanylate cyclase activity synonym: "biological regulation of guanylate cyclase activity" EXACT [OBOL:automatic] synonym: "biological regulation of guanylyl cyclase activity" EXACT [OBOL:automatic] synonym: "regulation of guanylyl cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031282: 0.29 ! parsing: GO:0031283 ! parse: GO:0031283 using "negative regulation of guanylate cyclase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004383]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of guanylate cyclase activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates guanylate cyclase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004383])] [Term] id: GO:0031283 ! negative regulation of guanylate cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004383 ! guanylate cyclase activity synonym: "negative biological regulation of guanylate cyclase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of guanylyl cyclase activity" EXACT [OBOL:automatic] synonym: "negative regulation of guanylyl cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031283: 1.09 ! parsing: GO:0031284 ! parse: GO:0031284 using "positive regulation of guanylate cyclase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004383]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of guanylate cyclase activity." ! PROPOSED: biological regulation that OBO_REL:positively_regulates guanylate cyclase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004383])] [Term] id: GO:0031284 ! positive regulation of guanylate cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004383 ! guanylate cyclase activity synonym: "positive biological regulation of guanylate cyclase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of guanylyl cyclase activity" EXACT [OBOL:automatic] synonym: "positive regulation of guanylyl cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031284: 1.09 ! parsing: GO:0031657 ! No parse for: GO:0031657 G1/S-specific regulation of cyclin-dependent protein kinase activity ! parsing: GO:0031658 ! No parse for: GO:0031658 G1/S-specific negative regulation of cyclin-dependent protein kinase activity ! parsing: GO:0031659 ! No parse for: GO:0031659 G1/S-specific positive regulation of cyclin-dependent protein kinase activity ! parsing: GO:0031660 ! No parse for: GO:0031660 G2/M-specific regulation of cyclin-dependent protein kinase activity ! parsing: GO:0031661 ! No parse for: GO:0031661 G2/M-specific negative regulation of cyclin-dependent protein kinase activity ! parsing: GO:0031662 ! No parse for: GO:0031662 G2/M-specific positive regulation of cyclin-dependent protein kinase activity ! parsing: GO:0031684 ! No parse for: GO:0031684 heterotrimeric G-protein complex cycle ! parsing: GO:0032069 ! parse: GO:0032069 using "regulation of nuclease activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004518]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids." ! PROPOSED: biological regulation that OBO_REL:regulates nuclease activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004518])] [Term] id: GO:0032069 ! regulation of nuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004518 ! nuclease activity synonym: "biological regulation of nuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032069: 0.29 ! parsing: GO:0032070 ! parse: GO:0032070 using "regulation of deoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004536]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid." ! PROPOSED: biological regulation that OBO_REL:regulates deoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004536])] [Term] id: GO:0032070 ! regulation of deoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004536 ! deoxyribonuclease activity synonym: "biological regulation of deoxyribonuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032070: 0.29 ! parsing: GO:0032071 ! parse: GO:0032071 using "regulation of endodeoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004520]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks." ! PROPOSED: biological regulation that OBO_REL:regulates endodeoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004520])] [Term] id: GO:0032071 ! regulation of endodeoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004520 ! endodeoxyribonuclease activity synonym: "biological regulation of endodeoxyribonuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032071: 0.29 ! parsing: GO:0032072 ! parse: GO:0032072 using "regulation of restriction endodeoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0015666]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of a restriction endodeoxyribonuclease activity, the catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks." ! PROPOSED: biological regulation that OBO_REL:regulates restriction endodeoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0015666])] [Term] id: GO:0032072 ! regulation of restriction endodeoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0015666 ! restriction endodeoxyribonuclease activity synonym: "biological regulation of restriction endodeoxyribonuclease activity" EXACT [OBOL:automatic] synonym: "biological regulation of restriction endonuclease activity" EXACT [OBOL:automatic] synonym: "biological regulation of restriction enzyme activity" EXACT [OBOL:automatic] synonym: "regulation of restriction endonuclease activity" EXACT [OBOL:automatic] synonym: "regulation of restriction enzyme activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032072: 0.29 ! parsing: GO:0032073 ! parse: GO:0032073 using "negative regulation of restriction endodeoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0015666]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of a restriction endodeoxyribonuclease activity, the catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates restriction endodeoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0015666])] [Term] id: GO:0032073 ! negative regulation of restriction endodeoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0015666 ! restriction endodeoxyribonuclease activity synonym: "negative biological regulation of restriction endodeoxyribonuclease activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of restriction endonuclease activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of restriction enzyme activity" EXACT [OBOL:automatic] synonym: "negative regulation of restriction endonuclease activity" EXACT [OBOL:automatic] synonym: "negative regulation of restriction enzyme activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032073: 1.09 ! parsing: GO:0032074 ! parse: GO:0032074 using "negative regulation of nuclease activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004518]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of nuclease activity, the hydrolysis of ester linkages within nucleic acids." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates nuclease activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004518])] [Term] id: GO:0032074 ! negative regulation of nuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004518 ! nuclease activity synonym: "negative biological regulation of nuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032074: 1.08 ! parsing: GO:0032075 ! parse: GO:0032075 using "positive regulation of nuclease activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004518]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids." ! PROPOSED: biological regulation that OBO_REL:positively_regulates nuclease activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004518])] [Term] id: GO:0032075 ! positive regulation of nuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004518 ! nuclease activity synonym: "positive biological regulation of nuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032075: 1.09 ! parsing: GO:0032076 ! parse: GO:0032076 using "negative regulation of deoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004536]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates deoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004536])] [Term] id: GO:0032076 ! negative regulation of deoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004536 ! deoxyribonuclease activity synonym: "negative biological regulation of deoxyribonuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032076: 1.09 ! parsing: GO:0032077 ! parse: GO:0032077 using "positive regulation of deoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004536]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid." ! PROPOSED: biological regulation that OBO_REL:positively_regulates deoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004536])] [Term] id: GO:0032077 ! positive regulation of deoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004536 ! deoxyribonuclease activity synonym: "positive biological regulation of deoxyribonuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032077: 1.08 ! parsing: GO:0032078 ! parse: GO:0032078 using "negative regulation of endodeoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004520]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates endodeoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004520])] [Term] id: GO:0032078 ! negative regulation of endodeoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004520 ! endodeoxyribonuclease activity synonym: "negative biological regulation of endodeoxyribonuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032078: 1.09 ! parsing: GO:0032079 ! parse: GO:0032079 using "positive regulation of endodeoxyribonuclease activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004520]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks." ! PROPOSED: biological regulation that OBO_REL:positively_regulates endodeoxyribonuclease activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004520])] [Term] id: GO:0032079 ! positive regulation of endodeoxyribonuclease activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004520 ! endodeoxyribonuclease activity synonym: "positive biological regulation of endodeoxyribonuclease activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032079: 1.09 ! parsing: GO:0032080 ! No parse for: GO:0032080 negative regulation of Type I restriction endodeoxyribonuclease activity ! parsing: GO:0032081 ! No parse for: GO:0032081 negative regulation of Type II restriction endodeoxyribonuclease activity ! parsing: GO:0032082 ! No parse for: GO:0032082 negative regulation of Type III restriction endodeoxyribonuclease activity ! parsing: GO:0032083 ! No parse for: GO:0032083 negative regulation of Type IV restriction endodeoxyribonuclease activity ! parsing: GO:0032084 ! No parse for: GO:0032084 regulation of Type I restriction endodeoxyribonuclease activity ! parsing: GO:0032085 ! No parse for: GO:0032085 regulation of Type II restriction endodeoxyribonuclease activity ! parsing: GO:0032086 ! No parse for: GO:0032086 regulation of Type III restriction endodeoxyribonuclease activity ! parsing: GO:0032087 ! No parse for: GO:0032087 regulation of Type IV restriction endodeoxyribonuclease activity ! parsing: GO:0032091 ! parse: GO:0032091 using "negative regulation of protein binding" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005515]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of protein binding." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates protein binding [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005515])] [Term] id: GO:0032091 ! negative regulation of protein binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0005515 ! protein binding synonym: "negative biological regulation of protein amino acid binding" EXACT [OBOL:automatic] synonym: "negative biological regulation of protein binding" EXACT [OBOL:automatic] synonym: "negative regulation of protein amino acid binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032091: 1.09 ! parsing: GO:0032092 ! parse: GO:0032092 using "positive regulation of protein binding" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0005515]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of protein binding." ! PROPOSED: biological regulation that OBO_REL:positively_regulates protein binding [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0005515])] [Term] id: GO:0032092 ! positive regulation of protein binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0005515 ! protein binding synonym: "positive biological regulation of protein amino acid binding" EXACT [OBOL:automatic] synonym: "positive biological regulation of protein binding" EXACT [OBOL:automatic] synonym: "positive regulation of protein amino acid binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032092: 1.09 ! parsing: GO:0032110 ! parse: GO:0032110 using "regulation of protein histidine kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004673]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of protein histidine kinase activity." ! PROPOSED: biological regulation that OBO_REL:regulates protein histidine kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004673])] [Term] id: GO:0032110 ! regulation of protein histidine kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004673 ! protein histidine kinase activity synonym: "biological regulation of histidine kinase" EXACT [OBOL:automatic] synonym: "biological regulation of protein histidine kinase activity" EXACT [OBOL:automatic] synonym: "biological regulation of protein-histidine kinase activity" EXACT [OBOL:automatic] synonym: "regulation of histidine kinase" EXACT [OBOL:automatic] synonym: "regulation of protein-histidine kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032110: 0.29 ! parsing: GO:0032111 ! No parse for: GO:0032111 activation of protein histidine kinase activity ! parsing: GO:0032112 ! parse: GO:0032112 using "negative regulation of protein histidine kinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004673]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of protein histidine kinase activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates protein histidine kinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004673])] [Term] id: GO:0032112 ! negative regulation of protein histidine kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004673 ! protein histidine kinase activity synonym: "negative biological regulation of histidine kinase" EXACT [OBOL:automatic] synonym: "negative biological regulation of protein histidine kinase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of protein-histidine kinase activity" EXACT [OBOL:automatic] synonym: "negative regulation of histidine kinase" EXACT [OBOL:automatic] synonym: "negative regulation of protein-histidine kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032112: 1.11 ! parsing: GO:0032113 ! parse: GO:0032113 using "regulation of carbohydrate phosphatase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0019203]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of carbohydrate phosphatase activity, the catalysis of the hydrolysis of phosphate from a carbohydrate phosphate." ! PROPOSED: biological regulation that OBO_REL:regulates carbohydrate phosphatase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0019203])] [Term] id: GO:0032113 ! regulation of carbohydrate phosphatase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0019203 ! carbohydrate phosphatase activity synonym: "biological regulation of carbohydrate phosphatase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032113: 0.29 ! parsing: GO:0032114 ! parse: GO:0032114 using "regulation of glucose-6-phosphatase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004346]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of glucose-6-phosphatase activity, the catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate." ! PROPOSED: biological regulation that OBO_REL:regulates glucose-6-phosphatase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004346])] [Term] id: GO:0032114 ! regulation of glucose-6-phosphatase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004346 ! glucose-6-phosphatase activity synonym: "biological regulation of glucose-6-phosphatase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032114: 0.28 ! parsing: GO:0032147 ! No parse for: GO:0032147 activation of protein kinase activity ! parsing: GO:0032148 ! No parse for: GO:0032148 activation of protein kinase B ! parsing: GO:0032312 ! No parse for: GO:0032312 regulation of ARF GTPase activity ! parsing: GO:0032313 ! No parse for: GO:0032313 regulation of Rab GTPase activity ! parsing: GO:0032314 ! No parse for: GO:0032314 regulation of Rac GTPase activity ! parsing: GO:0032315 ! No parse for: GO:0032315 regulation of Ral GTPase activity ! parsing: GO:0032316 ! No parse for: GO:0032316 regulation of Ran GTPase activity ! parsing: GO:0032317 ! No parse for: GO:0032317 regulation of Rap GTPase activity ! parsing: GO:0032318 ! No parse for: GO:0032318 regulation of Ras GTPase activity ! parsing: GO:0032319 ! No parse for: GO:0032319 regulation of Rho GTPase activity ! parsing: GO:0032320 ! No parse for: GO:0032320 positive regulation of Ras GTPase activity ! parsing: GO:0032321 ! No parse for: GO:0032321 positive regulation of Rho GTPase activity ! parsing: GO:0032415 ! parse: GO:0032415 using "regulation of sodium:hydrogen antiporter activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0015385]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out)." ! PROPOSED: biological regulation that OBO_REL:regulates sodium:hydrogen antiporter activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0015385])] [Term] id: GO:0032415 ! regulation of sodium:hydrogen antiporter activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0015385 ! sodium:hydrogen antiporter activity synonym: "biological regulation of sodium : hydrogen antiporter activity" EXACT [OBOL:automatic] synonym: "biological regulation of sodium : proton antiporter" EXACT [OBOL:automatic] synonym: "biological regulation of sodium/hydrogen antiporter" EXACT [OBOL:automatic] synonym: "regulation of sodium : hydrogen antiporter activity" EXACT [OBOL:automatic] synonym: "regulation of sodium : proton antiporter" EXACT [OBOL:automatic] synonym: "regulation of sodium/hydrogen antiporter" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032415: 0.29 ! parsing: GO:0032416 ! parse: GO:0032416 using "negative regulation of sodium:hydrogen antiporter activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0015385]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out)." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates sodium:hydrogen antiporter activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0015385])] [Term] id: GO:0032416 ! negative regulation of sodium:hydrogen antiporter activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0015385 ! sodium:hydrogen antiporter activity synonym: "negative biological regulation of sodium : hydrogen antiporter activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of sodium : proton antiporter" EXACT [OBOL:automatic] synonym: "negative biological regulation of sodium/hydrogen antiporter" EXACT [OBOL:automatic] synonym: "negative regulation of sodium : hydrogen antiporter activity" EXACT [OBOL:automatic] synonym: "negative regulation of sodium : proton antiporter" EXACT [OBOL:automatic] synonym: "negative regulation of sodium/hydrogen antiporter" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032416: 1.09 ! parsing: GO:0032417 ! parse: GO:0032417 using "positive regulation of sodium:hydrogen antiporter activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0015385]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out)." ! PROPOSED: biological regulation that OBO_REL:positively_regulates sodium:hydrogen antiporter activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0015385])] [Term] id: GO:0032417 ! positive regulation of sodium:hydrogen antiporter activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0015385 ! sodium:hydrogen antiporter activity synonym: "positive biological regulation of sodium : hydrogen antiporter activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of sodium : proton antiporter" EXACT [OBOL:automatic] synonym: "positive biological regulation of sodium/hydrogen antiporter" EXACT [OBOL:automatic] synonym: "positive regulation of sodium : hydrogen antiporter activity" EXACT [OBOL:automatic] synonym: "positive regulation of sodium : proton antiporter" EXACT [OBOL:automatic] synonym: "positive regulation of sodium/hydrogen antiporter" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032417: 1.09 ! parsing: GO:0032429 ! parse: GO:0032429 using "regulation of phospholipase A2 activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004623]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of the enzyme phospholipase A2." ! PROPOSED: biological regulation that OBO_REL:regulates phospholipase A2 activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004623])] [Term] id: GO:0032429 ! regulation of phospholipase A2 activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004623 ! phospholipase A2 activity synonym: "biological regulation of phospholipase A 2 activity" EXACT [OBOL:automatic] synonym: "regulation of phospholipase A 2 activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032429: 0.29 ! parsing: GO:0032430 ! parse: GO:0032430 using "positive regulation of phospholipase A2 activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004623]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of the enzyme phospholipase A2." ! PROPOSED: biological regulation that OBO_REL:positively_regulates phospholipase A2 activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004623])] [Term] id: GO:0032430 ! positive regulation of phospholipase A2 activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004623 ! phospholipase A2 activity synonym: "positive biological regulation of phospholipase A 2 activity" EXACT [OBOL:automatic] synonym: "positive regulation of phospholipase A 2 activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032430: 1.09 ! parsing: GO:0032431 ! No parse for: GO:0032431 activation of phospholipase A2 ! parsing: GO:0032768 ! parse: GO:0032768 using "regulation of monooxygenase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004497]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of a monooxygenase." ! PROPOSED: biological regulation that OBO_REL:regulates monooxygenase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004497])] [Term] id: GO:0032768 ! regulation of monooxygenase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004497 ! monooxygenase activity synonym: "biological regulation of monooxygenase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032768: 0.29 ! parsing: GO:0032769 ! parse: GO:0032769 using "negative regulation of monooxygenase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004497]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of a monooxygenase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates monooxygenase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004497])] [Term] id: GO:0032769 ! negative regulation of monooxygenase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004497 ! monooxygenase activity synonym: "negative biological regulation of monooxygenase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032769: 1.09 ! parsing: GO:0032770 ! parse: GO:0032770 using "positive regulation of monooxygenase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004497]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of a monooxygenase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates monooxygenase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004497])] [Term] id: GO:0032770 ! positive regulation of monooxygenase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004497 ! monooxygenase activity synonym: "positive biological regulation of monooxygenase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032770: 1.09 ! parsing: GO:0032771 ! No parse for: GO:0032771 regulation of monophenol oxygenase activity ! parsing: GO:0032772 ! No parse for: GO:0032772 negative regulation of monophenol oxygenase activity ! parsing: GO:0032773 ! No parse for: GO:0032773 positive regulation of monophenol oxygenase activity ! parsing: GO:0032780 ! parse: GO:0032780 using "negative regulation of ATPase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016887]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of ATP hydrolysis by an ATPase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates ATPase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016887])] [Term] id: GO:0032780 ! negative regulation of ATPase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0016887 ! ATPase activity synonym: "negative biological regulation of ATP phosphohydrolase" EXACT [OBOL:automatic] synonym: "negative biological regulation of ATPase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of adenosinetriphosphatase" EXACT [OBOL:automatic] synonym: "negative regulation of ATP phosphohydrolase" EXACT [OBOL:automatic] synonym: "negative regulation of adenosinetriphosphatase" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032780: 1.39 ! parsing: GO:0032781 ! parse: GO:0032781 using "positive regulation of ATPase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016887]) [-2] ! no existing xp def ! def: "Any process that activates or increases the rate of ATP hydrolysis by an ATPase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates ATPase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016887])] [Term] id: GO:0032781 ! positive regulation of ATPase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0016887 ! ATPase activity synonym: "positive biological regulation of ATP phosphohydrolase" EXACT [OBOL:automatic] synonym: "positive biological regulation of ATPase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of adenosinetriphosphatase" EXACT [OBOL:automatic] synonym: "positive regulation of ATP phosphohydrolase" EXACT [OBOL:automatic] synonym: "positive regulation of adenosinetriphosphatase" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032781: 1.4 ! parsing: GO:0032850 ! No parse for: GO:0032850 positive regulation of ARF GTPase activity ! parsing: GO:0032851 ! No parse for: GO:0032851 positive regulation of Rab GTPase activity ! parsing: GO:0032852 ! No parse for: GO:0032852 positive regulation of Ral GTPase activity ! parsing: GO:0032853 ! No parse for: GO:0032853 positive regulation of Ran GTPase activity ! parsing: GO:0032854 ! No parse for: GO:0032854 positive regulation of Rap GTPase activity ! parsing: GO:0032855 ! No parse for: GO:0032855 positive regulation of Rac GTPase activity ! parsing: GO:0032856 ! No parse for: GO:0032856 activation of Ras GTPase ! parsing: GO:0032857 ! No parse for: GO:0032857 activation of ARF GTPase ! parsing: GO:0032858 ! No parse for: GO:0032858 activation of Rab GTPase ! parsing: GO:0032859 ! No parse for: GO:0032859 activation of Ral GTPase ! parsing: GO:0032860 ! No parse for: GO:0032860 activation of Ran GTPase ! parsing: GO:0032861 ! No parse for: GO:0032861 activation of Rap GTPase ! parsing: GO:0032862 ! No parse for: GO:0032862 activation of Rho GTPase ! parsing: GO:0032863 ! No parse for: GO:0032863 activation of Rac GTPase ! parsing: GO:0032864 ! No parse for: GO:0032864 activation of Cdc42 GTPase ! parsing: GO:0033131 ! parse: GO:0033131 using "regulation of glucokinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004340]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule." ! PROPOSED: biological regulation that OBO_REL:regulates glucokinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004340])] [Term] id: GO:0033131 ! regulation of glucokinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004340 ! glucokinase activity synonym: "biological regulation of glucokinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033131: 0.28 ! parsing: GO:0033132 ! parse: GO:0033132 using "negative regulation of glucokinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004340]) [-2] ! no existing xp def ! def: "Any process that stops, prevents, or reduces the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates glucokinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004340])] [Term] id: GO:0033132 ! negative regulation of glucokinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004340 ! glucokinase activity synonym: "negative biological regulation of glucokinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033132: 0.32 ! parsing: GO:0033133 ! parse: GO:0033133 using "positive regulation of glucokinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004340]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule." ! PROPOSED: biological regulation that OBO_REL:positively_regulates glucokinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004340])] [Term] id: GO:0033133 ! positive regulation of glucokinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004340 ! glucokinase activity synonym: "positive biological regulation of glucokinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033133: 0.31 ! parsing: GO:0033252 ! parse: GO:0033252 using "regulation of beta-lactamase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0008800]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of a beta-lactam to yield a substituted beta-amino acid." ! PROPOSED: biological regulation that OBO_REL:regulates beta-lactamase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0008800])] [Term] id: GO:0033252 ! regulation of beta-lactamase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0008800 ! beta-lactamase activity synonym: "biological regulation of beta-lactamase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033252: 0.29 ! parsing: GO:0033253 ! parse: GO:0033253 using "regulation of penicillinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0033250]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of a penicillin to yield a substituted beta-amino acid derivative." ! PROPOSED: biological regulation that OBO_REL:regulates penicillinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0033250])] [Term] id: GO:0033253 ! regulation of penicillinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0033250 ! penicillinase activity synonym: "biological regulation of penicillinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033253: 0.29 ! parsing: GO:0033341 ! parse: GO:0033341 using "regulation of collagen binding" => cdef(GO:0065007, [OBO_REL:regulates=GO:0005518]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of collagen binding." ! PROPOSED: biological regulation that OBO_REL:regulates collagen binding [cdef(GO:0065007, [OBO_REL:regulates=GO:0005518])] [Term] id: GO:0033341 ! regulation of collagen binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0005518 ! collagen binding synonym: "biological regulation of collagen binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033341: 0.29 ! parsing: GO:0033342 ! parse: GO:0033342 using "negative regulation of collagen binding" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005518]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of collagen binding." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates collagen binding [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005518])] [Term] id: GO:0033342 ! negative regulation of collagen binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0005518 ! collagen binding synonym: "negative biological regulation of collagen binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033342: 1.09 ! parsing: GO:0033343 ! parse: GO:0033343 using "positive regulation of collagen binding" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0005518]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of collagen binding." ! PROPOSED: biological regulation that OBO_REL:positively_regulates collagen binding [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0005518])] [Term] id: GO:0033343 ! positive regulation of collagen binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0005518 ! collagen binding synonym: "positive biological regulation of collagen binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0033343: 1.09 ! parsing: GO:0035227 ! parse: GO:0035227 using "regulation of glutamate-cysteine ligase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004357]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of glutamate-cysteine ligase." ! PROPOSED: biological regulation that OBO_REL:regulates glutamate-cysteine ligase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004357])] [Term] id: GO:0035227 ! regulation of glutamate-cysteine ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004357 ! glutamate-cysteine ligase activity synonym: "biological regulation of gamma-glutamylcysteine synthetase activity" EXACT [OBOL:automatic] synonym: "biological regulation of glutamate-cysteine ligase activity" EXACT [OBOL:automatic] synonym: "regulation of gamma-glutamylcysteine synthetase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035227: 0.29 ! parsing: GO:0035228 ! parse: GO:0035228 using "negative regulation of glutamate-cysteine ligase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004357]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of the enzyme glutamate-cysteine ligase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates glutamate-cysteine ligase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004357])] [Term] id: GO:0035228 ! negative regulation of glutamate-cysteine ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004357 ! glutamate-cysteine ligase activity synonym: "negative biological regulation of gamma-glutamylcysteine synthetase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of glutamate-cysteine ligase activity" EXACT [OBOL:automatic] synonym: "negative regulation of gamma-glutamylcysteine synthetase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035228: 1.09 ! parsing: GO:0035229 ! parse: GO:0035229 using "positive regulation of glutamate-cysteine ligase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004357]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of glutamate-cysteine ligase, typically by lowering its sensitivity to inhibition by glutathione and by increasing its affinity for glutamate." ! PROPOSED: biological regulation that OBO_REL:positively_regulates glutamate-cysteine ligase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004357])] [Term] id: GO:0035229 ! positive regulation of glutamate-cysteine ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004357 ! glutamate-cysteine ligase activity synonym: "positive biological regulation of gamma-glutamylcysteine synthetase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of glutamate-cysteine ligase activity" EXACT [OBOL:automatic] synonym: "positive regulation of gamma-glutamylcysteine synthetase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035229: 1.09 ! parsing: GO:0042655 ! No parse for: GO:0042655 activation of JNKKK activity ! parsing: GO:0042976 ! No parse for: GO:0042976 activation of JAK protein ! parsing: GO:0042977 ! No parse for: GO:0042977 tyrosine phosphorylation of JAK2 protein ! parsing: GO:0043006 ! No parse for: GO:0043006 calcium-dependent phospholipase A2 activation ! parsing: GO:0043085 ! No parse for: GO:0043085 positive regulation of enzyme activity ! parsing: GO:0043086 ! No parse for: GO:0043086 negative regulation of enzyme activity ! parsing: GO:0043087 ! parse: GO:0043087 using "regulation of GTPase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0003924]) [-2] ! no existing xp def ! def: "Any process that modulates the rate of GTP hydrolysis by a GTPase." ! PROPOSED: biological regulation that OBO_REL:regulates GTPase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0003924])] [Term] id: GO:0043087 ! regulation of GTPase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0003924 ! GTPase activity synonym: "biological regulation of GTPase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043087: 0.29 ! parsing: GO:0043088 ! No parse for: GO:0043088 regulation of Cdc42 GTPase activity ! parsing: GO:0043089 ! No parse for: GO:0043089 positive regulation of Cdc42 GTPase activity ! parsing: GO:0043095 ! parse: GO:0043095 using "regulation of GTP cyclohydrolase I activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0003934]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of the enzyme GTP cyclohydrolase I." ! PROPOSED: biological regulation that OBO_REL:regulates GTP cyclohydrolase I activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0003934])] [Term] id: GO:0043095 ! regulation of GTP cyclohydrolase I activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0003934 ! GTP cyclohydrolase I activity synonym: "biological regulation of GTP cyclohydrolase I activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043095: 0.29 ! parsing: GO:0043104 ! parse: GO:0043104 using "positive regulation of GTP cyclohydrolase I activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003934]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of the enzyme GTP cyclohydrolase I." ! PROPOSED: biological regulation that OBO_REL:positively_regulates GTP cyclohydrolase I activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003934])] [Term] id: GO:0043104 ! positive regulation of GTP cyclohydrolase I activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0003934 ! GTP cyclohydrolase I activity synonym: "positive biological regulation of GTP cyclohydrolase I activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043104: 1.09 ! parsing: GO:0043105 ! parse: GO:0043105 using "negative regulation of GTP cyclohydrolase I activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0003934]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of the enzyme GTP cyclohydrolase I." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates GTP cyclohydrolase I activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0003934])] [Term] id: GO:0043105 ! negative regulation of GTP cyclohydrolase I activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0003934 ! GTP cyclohydrolase I activity synonym: "negative biological regulation of GTP cyclohydrolase I activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043105: 1.1 ! parsing: GO:0043126 ! parse: GO:0043126 using "regulation of 1-phosphatidylinositol 4-kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004430]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of the enzyme 1-phosphatidylinositol 4-kinase." ! PROPOSED: biological regulation that OBO_REL:regulates 1-phosphatidylinositol 4-kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004430])] [Term] id: GO:0043126 ! regulation of 1-phosphatidylinositol 4-kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004430 ! 1-phosphatidylinositol 4-kinase activity synonym: "biological regulation of 1-phosphatidylinositol 4-kinase activity" EXACT [OBOL:automatic] synonym: "biological regulation of PI 4 K" EXACT [OBOL:automatic] synonym: "regulation of PI 4 K" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043126: 0.57 ! parsing: GO:0043127 ! parse: GO:0043127 using "negative regulation of 1-phosphatidylinositol 4-kinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004430]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of the enzyme 1-phosphatidylinositol 4-kinase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates 1-phosphatidylinositol 4-kinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004430])] [Term] id: GO:0043127 ! negative regulation of 1-phosphatidylinositol 4-kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004430 ! 1-phosphatidylinositol 4-kinase activity synonym: "negative biological regulation of 1-phosphatidylinositol 4-kinase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of PI 4 K" EXACT [OBOL:automatic] synonym: "negative regulation of PI 4 K" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043127: 1.4 ! parsing: GO:0043128 ! parse: GO:0043128 using "positive regulation of 1-phosphatidylinositol 4-kinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004430]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of 1-phosphatidylinositol 4-kinase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates 1-phosphatidylinositol 4-kinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004430])] [Term] id: GO:0043128 ! positive regulation of 1-phosphatidylinositol 4-kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004430 ! 1-phosphatidylinositol 4-kinase activity synonym: "positive biological regulation of 1-phosphatidylinositol 4-kinase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of PI 4 K" EXACT [OBOL:automatic] synonym: "positive regulation of PI 4 K" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043128: 1.41 ! parsing: GO:0043154 ! Already have xp for: GO:0043154 negative regulation of caspase activity ! CURRENT : biological regulation that OBO_REL:negatively_regulates caspase activation [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0006919])] ! parsing: GO:0043280 ! parse: GO:0043280 using "positive regulation of caspase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0030693]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis." ! PROPOSED: biological regulation that OBO_REL:positively_regulates caspase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0030693])] [Term] id: GO:0043280 ! positive regulation of caspase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0030693 ! caspase activity synonym: "positive biological regulation of caspase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043280: 1.1 ! parsing: GO:0043281 ! parse: GO:0043281 using "regulation of caspase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0030693]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis." ! PROPOSED: biological regulation that OBO_REL:regulates caspase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0030693])] [Term] id: GO:0043281 ! regulation of caspase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0030693 ! caspase activity synonym: "biological regulation of caspase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043281: 0.29 ! parsing: GO:0043388 ! parse: GO:0043388 using "positive regulation of DNA binding" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003677]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid." ! PROPOSED: biological regulation that OBO_REL:positively_regulates DNA binding [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003677])] [Term] id: GO:0043388 ! positive regulation of DNA binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0003677 ! DNA binding synonym: "positive biological regulation of DNA binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043388: 1.1 ! parsing: GO:0043392 ! parse: GO:0043392 using "negative regulation of DNA binding" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0003677]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates DNA binding [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0003677])] [Term] id: GO:0043392 ! negative regulation of DNA binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0003677 ! DNA binding synonym: "negative biological regulation of DNA binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043392: 1.1 ! parsing: GO:0043393 ! parse: GO:0043393 using "regulation of protein binding" => cdef(GO:0065007, [OBO_REL:regulates=GO:0005515]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of protein binding." ! PROPOSED: biological regulation that OBO_REL:regulates protein binding [cdef(GO:0065007, [OBO_REL:regulates=GO:0005515])] [Term] id: GO:0043393 ! regulation of protein binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0005515 ! protein binding synonym: "biological regulation of protein amino acid binding" EXACT [OBOL:automatic] synonym: "biological regulation of protein binding" EXACT [OBOL:automatic] synonym: "regulation of protein amino acid binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043393: 0.29 ! parsing: GO:0043405 ! parse: GO:0043405 using "regulation of MAP kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004707]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of MAP kinase activity." ! PROPOSED: biological regulation that OBO_REL:regulates MAP kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004707])] [Term] id: GO:0043405 ! regulation of MAPK activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004707 ! MAP kinase activity synonym: "biological regulation of MAP kinase activity" EXACT [OBOL:automatic] synonym: "biological regulation of MAPK" EXACT [OBOL:automatic] synonym: "biological regulation of mitogen activated kinase" EXACT [OBOL:automatic] synonym: "regulation of MAPK" EXACT [OBOL:automatic] synonym: "regulation of mitogen activated kinase" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043405: 1.15 ! parsing: GO:0043406 ! parse: GO:0043406 using "positive regulation of MAP kinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004707]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of MAP kinase activity." ! PROPOSED: biological regulation that OBO_REL:positively_regulates MAP kinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004707])] [Term] id: GO:0043406 ! positive regulation of MAPK activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004707 ! MAP kinase activity synonym: "positive biological regulation of MAP kinase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of MAPK" EXACT [OBOL:automatic] synonym: "positive biological regulation of mitogen activated kinase" EXACT [OBOL:automatic] synonym: "positive regulation of MAPK" EXACT [OBOL:automatic] synonym: "positive regulation of mitogen activated kinase" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043406: 2.03 ! parsing: GO:0043407 ! parse: GO:0043407 using "negative regulation of MAP kinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004707]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates MAP kinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004707])] [Term] id: GO:0043407 ! negative regulation of MAPK activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004707 ! MAP kinase activity synonym: "negative biological regulation of MAP kinase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of MAPK" EXACT [OBOL:automatic] synonym: "negative biological regulation of mitogen activated kinase" EXACT [OBOL:automatic] synonym: "negative regulation of MAPK" EXACT [OBOL:automatic] synonym: "negative regulation of mitogen activated kinase" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043407: 2.03 ! parsing: GO:0043462 ! parse: GO:0043462 using "regulation of ATPase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0016887]) [-2] ! no existing xp def ! def: "Any process that modulates the rate of ATP hydrolysis by an ATPase." ! PROPOSED: biological regulation that OBO_REL:regulates ATPase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0016887])] [Term] id: GO:0043462 ! regulation of ATPase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0016887 ! ATPase activity synonym: "biological regulation of ATP phosphohydrolase" EXACT [OBOL:automatic] synonym: "biological regulation of ATPase activity" EXACT [OBOL:automatic] synonym: "biological regulation of adenosinetriphosphatase" EXACT [OBOL:automatic] synonym: "regulation of ATP phosphohydrolase" EXACT [OBOL:automatic] synonym: "regulation of adenosinetriphosphatase" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043462: 0.57 ! parsing: GO:0043496 ! No parse for: GO:0043496 regulation of protein homodimerization ! parsing: GO:0043497 ! No parse for: GO:0043497 regulation of protein heterodimerization ! parsing: GO:0043506 ! parse: GO:0043506 using "regulation of JUN kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004705]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of JUN kinase activity." ! PROPOSED: biological regulation that OBO_REL:regulates JUN kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004705])] [Term] id: GO:0043506 ! regulation of JNK activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004705 ! JUN kinase activity synonym: "biological regulation of JNK" EXACT [OBOL:automatic] synonym: "biological regulation of JUN kinase activity" EXACT [OBOL:automatic] synonym: "regulation of JNK" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043506: 0.86 ! parsing: GO:0043507 ! parse: GO:0043507 using "positive regulation of JUN kinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004705]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of JUN kinase activity." ! PROPOSED: biological regulation that OBO_REL:positively_regulates JUN kinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004705])] [Term] id: GO:0043507 ! positive regulation of JNK activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004705 ! JUN kinase activity synonym: "positive biological regulation of JNK" EXACT [OBOL:automatic] synonym: "positive biological regulation of JUN kinase activity" EXACT [OBOL:automatic] synonym: "positive regulation of JNK" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043507: 1.71 ! parsing: GO:0043508 ! parse: GO:0043508 using "negative regulation of JUN kinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004705]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of JUN kinase activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates JUN kinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004705])] [Term] id: GO:0043508 ! negative regulation of JNK activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004705 ! JUN kinase activity synonym: "negative biological regulation of JNK" EXACT [OBOL:automatic] synonym: "negative biological regulation of JUN kinase activity" EXACT [OBOL:automatic] synonym: "negative regulation of JNK" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043508: 1.72 ! parsing: GO:0043547 ! parse: GO:0043547 using "positive regulation of GTPase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003924]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of a GTPase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates GTPase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003924])] [Term] id: GO:0043547 ! positive regulation of GTPase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0003924 ! GTPase activity synonym: "positive biological regulation of GTPase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043547: 1.1 ! parsing: GO:0043549 ! parse: GO:0043549 using "regulation of kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0016301]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule." ! PROPOSED: biological regulation that OBO_REL:regulates kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0016301])] [Term] id: GO:0043549 ! regulation of kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0016301 ! kinase activity synonym: "biological regulation of kinase activity" EXACT [OBOL:automatic] synonym: "biological regulation of phosphokinase" EXACT [OBOL:automatic] synonym: "regulation of phosphokinase" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043549: 0.29 ! parsing: GO:0043550 ! parse: GO:0043550 using "regulation of lipid kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0001727]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid." ! PROPOSED: biological regulation that OBO_REL:regulates lipid kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0001727])] [Term] id: GO:0043550 ! regulation of lipid kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0001727 ! lipid kinase activity synonym: "biological regulation of lipid kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043550: 0.29 ! parsing: GO:0043551 ! parse: GO:0043551 using "regulation of phosphoinositide 3-kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0035004]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of phosphoinositide 3-kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an inositol lipid at the 3' position of the inositol ring." ! PROPOSED: biological regulation that OBO_REL:regulates phosphoinositide 3-kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0035004])] [Term] id: GO:0043551 ! regulation of phosphoinositide 3-kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0035004 ! phosphoinositide 3-kinase activity synonym: "biological regulation of phosphoinositide 3-kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043551: 0.29 ! parsing: GO:0043552 ! parse: GO:0043552 using "positive regulation of phosphoinositide 3-kinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0035004]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity." ! PROPOSED: biological regulation that OBO_REL:positively_regulates phosphoinositide 3-kinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0035004])] [Term] id: GO:0043552 ! positive regulation of phosphoinositide 3-kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0035004 ! phosphoinositide 3-kinase activity synonym: "positive biological regulation of phosphoinositide 3-kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043552: 1.1 ! parsing: GO:0043553 ! parse: GO:0043553 using "negative regulation of phosphoinositide 3-kinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0035004]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of phosphoinositide 3-kinase activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates phosphoinositide 3-kinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0035004])] [Term] id: GO:0043553 ! negative regulation of phosphoinositide 3-kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0035004 ! phosphoinositide 3-kinase activity synonym: "negative biological regulation of phosphoinositide 3-kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043553: 1.09 ! parsing: GO:0043666 ! parse: GO:0043666 using "regulation of phosphoprotein phosphatase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004721]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein." ! PROPOSED: biological regulation that OBO_REL:regulates phosphoprotein phosphatase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004721])] [Term] id: GO:0043666 ! regulation of phosphoprotein phosphatase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004721 ! phosphoprotein phosphatase activity synonym: "biological regulation of phosphoprotein phosphatase activity" EXACT [OBOL:automatic] synonym: "biological regulation of protein phosphatase activity" EXACT [OBOL:automatic] synonym: "regulation of protein phosphatase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043666: 0.29 ! parsing: GO:0045736 ! parse: GO:0045736 using "negative regulation of CDK activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004693]) [-2] ! parse: GO:0045736 using "negative regulation of cyclin-dependent protein kinase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004693]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates cyclin-dependent protein kinase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004693])] [Term] id: GO:0045736 ! negative regulation of cyclin-dependent protein kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004693 ! cyclin-dependent protein kinase activity synonym: "negative biological regulation of CDK activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of CDK, catalytic subunit activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of cyclin-dependent protein kinase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of cyclin-dependent protein kinase, intrinsic catalyst activity" EXACT [OBOL:automatic] synonym: "negative regulation of CDK, catalytic subunit activity" EXACT [OBOL:automatic] synonym: "negative regulation of cyclin-dependent protein kinase, intrinsic catalyst activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045736: 1.41 ! parsing: GO:0045737 ! parse: GO:0045737 using "positive regulation of CDK activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004693]) [-2] ! parse: GO:0045737 using "positive regulation of cyclin-dependent protein kinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004693]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of CDK activity." ! PROPOSED: biological regulation that OBO_REL:positively_regulates cyclin-dependent protein kinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004693])] [Term] id: GO:0045737 ! positive regulation of cyclin-dependent protein kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004693 ! cyclin-dependent protein kinase activity synonym: "positive biological regulation of CDK activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of CDK, catalytic subunit activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of cyclin-dependent protein kinase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of cyclin-dependent protein kinase, intrinsic catalyst activity" EXACT [OBOL:automatic] synonym: "positive regulation of CDK, catalytic subunit activity" EXACT [OBOL:automatic] synonym: "positive regulation of cyclin-dependent protein kinase, intrinsic catalyst activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045737: 1.41 ! parsing: GO:0045761 ! parse: GO:0045761 using "regulation of adenylate cyclase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004016]) [-2] ! parse: GO:0045761 using "regulation of adenylyl cyclase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004016]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of adenylate cyclase activity." ! PROPOSED: biological regulation that OBO_REL:regulates adenylate cyclase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004016])] [Term] id: GO:0045761 ! regulation of adenylate cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004016 ! adenylate cyclase activity synonym: "biological regulation of adenylate cyclase activity" EXACT [OBOL:automatic] synonym: "biological regulation of adenylyl cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045761: 0.58 ! parsing: GO:0045762 ! parse: GO:0045762 using "positive regulation of adenylate cyclase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004016]) [-2] ! parse: GO:0045762 using "positive regulation of adenylyl cyclase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004016]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity." ! PROPOSED: biological regulation that OBO_REL:positively_regulates adenylate cyclase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004016])] [Term] id: GO:0045762 ! positive regulation of adenylate cyclase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004016 ! adenylate cyclase activity synonym: "positive biological regulation of adenylate cyclase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of adenylyl cyclase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045762: 1.41 ! parsing: GO:0045859 ! parse: GO:0045859 using "regulation of protein kinase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004672]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of protein kinase activity." ! PROPOSED: biological regulation that OBO_REL:regulates protein kinase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004672])] [Term] id: GO:0045859 ! regulation of protein kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004672 ! protein kinase activity synonym: "biological regulation of protein kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045859: 0.29 ! parsing: GO:0045860 ! parse: GO:0045860 using "positive regulation of protein kinase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004672]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of protein kinase activity." ! PROPOSED: biological regulation that OBO_REL:positively_regulates protein kinase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004672])] [Term] id: GO:0045860 ! positive regulation of protein kinase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004672 ! protein kinase activity synonym: "positive biological regulation of protein kinase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045860: 1.08 ! parsing: GO:0048552 ! No parse for: GO:0048552 regulation of metalloenzyme activity ! parsing: GO:0048553 ! No parse for: GO:0048553 negative regulation of metalloenzyme activity ! parsing: GO:0048554 ! No parse for: GO:0048554 positive regulation of metalloenzyme activity ! parsing: GO:0050790 ! parse: GO:0050790 using "regulation of catalytic activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0003824]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of an enzyme." ! PROPOSED: biological regulation that OBO_REL:regulates catalytic activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0003824])] [Term] id: GO:0050790 ! regulation of catalytic activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0003824 ! catalytic activity synonym: "biological regulation of catalytic activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0050790: 0.58 ! parsing: GO:0050999 ! parse: GO:0050999 using "regulation of nitric-oxide synthase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004517]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of the enzyme nitric-oxide synthase." ! PROPOSED: biological regulation that OBO_REL:regulates nitric-oxide synthase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004517])] [Term] id: GO:0050999 ! regulation of nitric-oxide synthase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004517 ! nitric-oxide synthase activity synonym: "biological regulation of nitric oxide synthase activity" EXACT [OBOL:automatic] synonym: "biological regulation of nitric-oxide synthase activity" EXACT [OBOL:automatic] synonym: "regulation of nitric oxide synthase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0050999: 1.1 ! parsing: GO:0051000 ! parse: GO:0051000 using "positive regulation of nitric-oxide synthase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004517]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of the enzyme nitric-oxide synthase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates nitric-oxide synthase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004517])] [Term] id: GO:0051000 ! positive regulation of nitric-oxide synthase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004517 ! nitric-oxide synthase activity synonym: "positive biological regulation of nitric oxide synthase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of nitric-oxide synthase activity" EXACT [OBOL:automatic] synonym: "positive regulation of nitric oxide synthase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051000: 1.92 ! parsing: GO:0051001 ! parse: GO:0051001 using "negative regulation of nitric-oxide synthase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004517]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of the enzyme nitric-oxide synthase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates nitric-oxide synthase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004517])] [Term] id: GO:0051001 ! negative regulation of nitric-oxide synthase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004517 ! nitric-oxide synthase activity synonym: "negative biological regulation of nitric oxide synthase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of nitric-oxide synthase activity" EXACT [OBOL:automatic] synonym: "negative regulation of nitric oxide synthase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051001: 1.4 ! parsing: GO:0051004 ! parse: GO:0051004 using "regulation of lipoprotein lipase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004465]) [-2] ! no existing xp def ! def: "Any process that modulates the activity of the enzyme lipoprotein lipase." ! PROPOSED: biological regulation that OBO_REL:regulates lipoprotein lipase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004465])] [Term] id: GO:0051004 ! regulation of lipoprotein lipase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004465 ! lipoprotein lipase activity synonym: "biological regulation of lipoprotein lipase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051004: 0.29 ! parsing: GO:0051005 ! parse: GO:0051005 using "negative regulation of lipoprotein lipase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004465]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of the enzyme lipoprotein lipase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates lipoprotein lipase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004465])] [Term] id: GO:0051005 ! negative regulation of lipoprotein lipase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004465 ! lipoprotein lipase activity synonym: "negative biological regulation of lipoprotein lipase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051005: 1.08 ! parsing: GO:0051006 ! parse: GO:0051006 using "positive regulation of lipoprotein lipase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004465]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of the enzyme lipoprotein lipase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates lipoprotein lipase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004465])] [Term] id: GO:0051006 ! positive regulation of lipoprotein lipase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004465 ! lipoprotein lipase activity synonym: "positive biological regulation of lipoprotein lipase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051006: 1.09 ! parsing: GO:0051095 ! parse: GO:0051095 using "regulation of helicase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004386]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of helicase activity." ! PROPOSED: biological regulation that OBO_REL:regulates helicase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004386])] [Term] id: GO:0051095 ! regulation of helicase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004386 ! helicase activity synonym: "biological regulation of helicase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051095: 0.29 ! parsing: GO:0051096 ! parse: GO:0051096 using "positive regulation of helicase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004386]) [-2] ! no existing xp def ! def: "Any process that activates or increases the activity of a helicase." ! PROPOSED: biological regulation that OBO_REL:positively_regulates helicase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004386])] [Term] id: GO:0051096 ! positive regulation of helicase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004386 ! helicase activity synonym: "positive biological regulation of helicase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051096: 1.1 ! parsing: GO:0051097 ! parse: GO:0051097 using "negative regulation of helicase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004386]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of a helicase." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates helicase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004386])] [Term] id: GO:0051097 ! negative regulation of helicase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004386 ! helicase activity synonym: "negative biological regulation of helicase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051097: 1.1 ! parsing: GO:0051098 ! parse: GO:0051098 using "regulation of binding" => cdef(GO:0065007, [OBO_REL:regulates=GO:0005488]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule." ! PROPOSED: biological regulation that OBO_REL:regulates binding [cdef(GO:0065007, [OBO_REL:regulates=GO:0005488])] [Term] id: GO:0051098 ! regulation of binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0005488 ! binding synonym: "biological regulation of binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051098: 0.29 ! parsing: GO:0051099 ! parse: GO:0051099 using "positive regulation of binding" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0005488]) [-2] ! no existing xp def ! def: "Any process that activates or increases the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule." ! PROPOSED: biological regulation that OBO_REL:positively_regulates binding [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0005488])] [Term] id: GO:0051099 ! positive regulation of binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0005488 ! binding synonym: "positive biological regulation of binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051099: 1.1 ! parsing: GO:0051100 ! parse: GO:0051100 using "negative regulation of binding" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005488]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates binding [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0005488])] [Term] id: GO:0051100 ! negative regulation of binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0005488 ! binding synonym: "negative biological regulation of binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051100: 1.1 ! parsing: GO:0051101 ! parse: GO:0051101 using "regulation of DNA binding" => cdef(GO:0065007, [OBO_REL:regulates=GO:0003677]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid." ! PROPOSED: biological regulation that OBO_REL:regulates DNA binding [cdef(GO:0065007, [OBO_REL:regulates=GO:0003677])] [Term] id: GO:0051101 ! regulation of DNA binding intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0003677 ! DNA binding synonym: "biological regulation of DNA binding" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051101: 0.29 ! parsing: GO:0051336 ! parse: GO:0051336 using "regulation of hydrolase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0016787]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3." ! PROPOSED: biological regulation that OBO_REL:regulates hydrolase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0016787])] [Term] id: GO:0051336 ! regulation of hydrolase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0016787 ! hydrolase activity synonym: "biological regulation of hydrolase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051336: 0.55 ! parsing: GO:0051338 ! parse: GO:0051338 using "regulation of transferase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0016740]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2." ! PROPOSED: biological regulation that OBO_REL:regulates transferase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0016740])] [Term] id: GO:0051338 ! regulation of transferase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0016740 ! transferase activity synonym: "biological regulation of transferase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051338: 0.55 ! parsing: GO:0051339 ! parse: GO:0051339 using "regulation of lyase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0016829]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring." ! PROPOSED: biological regulation that OBO_REL:regulates lyase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0016829])] [Term] id: GO:0051339 ! regulation of lyase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0016829 ! lyase activity synonym: "biological regulation of lyase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051339: 0.55 ! parsing: GO:0051340 ! parse: GO:0051340 using "regulation of ligase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0016874]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6." ! PROPOSED: biological regulation that OBO_REL:regulates ligase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0016874])] [Term] id: GO:0051340 ! regulation of ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0016874 ! ligase activity synonym: "biological regulation of ligase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051340: 0.55 ! parsing: GO:0051341 ! parse: GO:0051341 using "regulation of oxidoreductase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0016491]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced." ! PROPOSED: biological regulation that OBO_REL:regulates oxidoreductase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0016491])] [Term] id: GO:0051341 ! regulation of oxidoreductase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0016491 ! oxidoreductase activity synonym: "biological regulation of oxidoreductase activity" EXACT [OBOL:automatic] synonym: "biological regulation of redox activity" EXACT [OBOL:automatic] synonym: "regulation of redox activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051341: 0.55 ! parsing: GO:0051342 ! No parse for: GO:0051342 regulation of cyclic nucleotide phosphodiesterase activity ! parsing: GO:0051343 ! No parse for: GO:0051343 positive regulation of cyclic nucleotide phosphodiesterase activity ! parsing: GO:0051344 ! No parse for: GO:0051344 negative regulation of cyclic nucleotide phosphodiesterase activity ! parsing: GO:0051345 ! parse: GO:0051345 using "positive regulation of hydrolase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016787]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds." ! PROPOSED: biological regulation that OBO_REL:positively_regulates hydrolase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016787])] [Term] id: GO:0051345 ! positive regulation of hydrolase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0016787 ! hydrolase activity synonym: "positive biological regulation of hydrolase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051345: 1.36 ! parsing: GO:0051346 ! parse: GO:0051346 using "negative regulation of hydrolase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016787]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates hydrolase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016787])] [Term] id: GO:0051346 ! negative regulation of hydrolase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0016787 ! hydrolase activity synonym: "negative biological regulation of hydrolase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051346: 1.36 ! parsing: GO:0051347 ! parse: GO:0051347 using "positive regulation of transferase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016740]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor." ! PROPOSED: biological regulation that OBO_REL:positively_regulates transferase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016740])] [Term] id: GO:0051347 ! positive regulation of transferase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0016740 ! transferase activity synonym: "positive biological regulation of transferase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051347: 1.35 ! parsing: GO:0051348 ! parse: GO:0051348 using "negative regulation of transferase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016740]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates transferase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016740])] [Term] id: GO:0051348 ! negative regulation of transferase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0016740 ! transferase activity synonym: "negative biological regulation of transferase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051348: 1.36 ! parsing: GO:0051349 ! parse: GO:0051349 using "positive regulation of lyase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016829]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond." ! PROPOSED: biological regulation that OBO_REL:positively_regulates lyase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016829])] [Term] id: GO:0051349 ! positive regulation of lyase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0016829 ! lyase activity synonym: "positive biological regulation of lyase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051349: 1.35 ! parsing: GO:0051350 ! parse: GO:0051350 using "negative regulation of lyase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016829]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates lyase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016829])] [Term] id: GO:0051350 ! negative regulation of lyase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0016829 ! lyase activity synonym: "negative biological regulation of lyase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051350: 1.38 ! parsing: GO:0051351 ! parse: GO:0051351 using "positive regulation of ligase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016874]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate." ! PROPOSED: biological regulation that OBO_REL:positively_regulates ligase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016874])] [Term] id: GO:0051351 ! positive regulation of ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0016874 ! ligase activity synonym: "positive biological regulation of ligase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051351: 1.36 ! parsing: GO:0051352 ! parse: GO:0051352 using "negative regulation of ligase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016874]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates ligase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016874])] [Term] id: GO:0051352 ! negative regulation of ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0016874 ! ligase activity synonym: "negative biological regulation of ligase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051352: 1.36 ! parsing: GO:0051353 ! parse: GO:0051353 using "positive regulation of oxidoreductase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016491]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered." ! PROPOSED: biological regulation that OBO_REL:positively_regulates oxidoreductase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0016491])] [Term] id: GO:0051353 ! positive regulation of oxidoreductase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0016491 ! oxidoreductase activity synonym: "positive biological regulation of oxidoreductase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of redox activity" EXACT [OBOL:automatic] synonym: "positive regulation of redox activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051353: 1.35 ! parsing: GO:0051354 ! parse: GO:0051354 using "negative regulation of oxidoreductase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016491]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates oxidoreductase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0016491])] [Term] id: GO:0051354 ! negative regulation of oxidoreductase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0016491 ! oxidoreductase activity synonym: "negative biological regulation of oxidoreductase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of redox activity" EXACT [OBOL:automatic] synonym: "negative regulation of redox activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051354: 1.36 ! parsing: GO:0051389 ! No parse for: GO:0051389 inactivation of MAPKK activity ! parsing: GO:0051390 ! No parse for: GO:0051390 inactivation of MAPKKK activity ! parsing: GO:0051421 ! parse: GO:0051421 using "regulation of endo-1,4-beta-xylanase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0031176]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of endo-1,4-beta-xylanase activity, the catalysis of the endohydrolysis of 1,4-beta-D-xylosidic linkages in xylans." ! PROPOSED: biological regulation that OBO_REL:regulates endo-1,4-beta-xylanase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0031176])] [Term] id: GO:0051421 ! regulation of endo-1,4-beta-xylanase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0031176 ! endo-1,4-beta-xylanase activity synonym: "biological regulation of endo-1, 4-b-xylanase activity" EXACT [OBOL:automatic] synonym: "biological regulation of endo-1, 4-beta-xylanase activity" EXACT [OBOL:automatic] synonym: "regulation of endo-1, 4-b-xylanase activity" EXACT [OBOL:automatic] synonym: "regulation of endo-1, 4-beta-xylanase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051421: 0.29 ! parsing: GO:0051422 ! parse: GO:0051422 using "negative regulation of endo-1,4-beta-xylanase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0031176]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the rate of endo-1,4-beta-xylanase activity, the catalysis of the endohydrolysis of 1,4-beta-D-xylosidic linkages in xylans." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates endo-1,4-beta-xylanase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0031176])] [Term] id: GO:0051422 ! negative regulation of endo-1,4-beta-xylanase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0031176 ! endo-1,4-beta-xylanase activity synonym: "negative biological regulation of endo-1, 4-b-xylanase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of endo-1, 4-beta-xylanase activity" EXACT [OBOL:automatic] synonym: "negative regulation of endo-1, 4-b-xylanase activity" EXACT [OBOL:automatic] synonym: "negative regulation of endo-1, 4-beta-xylanase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051422: 1.1 ! parsing: GO:0051423 ! parse: GO:0051423 using "positive regulation of endo-1,4-beta-xylanase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0031176]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of endo-1,4-beta-xylanase activity, the catalysis of the endohydrolysis of 1,4-beta-D-xylosidic linkages in xylans." ! PROPOSED: biological regulation that OBO_REL:positively_regulates endo-1,4-beta-xylanase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0031176])] [Term] id: GO:0051423 ! positive regulation of endo-1,4-beta-xylanase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0031176 ! endo-1,4-beta-xylanase activity synonym: "positive biological regulation of endo-1, 4-b-xylanase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of endo-1, 4-beta-xylanase activity" EXACT [OBOL:automatic] synonym: "positive regulation of endo-1, 4-b-xylanase activity" EXACT [OBOL:automatic] synonym: "positive regulation of endo-1, 4-beta-xylanase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051423: 1.1 ! parsing: GO:0051436 ! Already have xp for: GO:0051436 negative regulation of ubiquitin ligase activity during mitotic cell cycle ! CURRENT : negative regulation of ubiquitin ligase activity that OBO_REL:part_of mitotic cell cycle [cdef(GO:0051444, [OBO_REL:part_of=GO:0000278])] ! parsing: GO:0051437 ! Already have xp for: GO:0051437 positive regulation of ubiquitin ligase activity during mitotic cell cycle ! CURRENT : positive regulation of ubiquitin ligase activity that OBO_REL:part_of mitotic cell cycle [cdef(GO:0051443, [OBO_REL:part_of=GO:0000278])] ! parsing: GO:0051438 ! parse: GO:0051438 using "regulation of ubiquitin ligase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004842]) [-2] ! parse: GO:0051438 using "regulation of ubiquitin-protein ligase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0004842]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine." ! PROPOSED: biological regulation that OBO_REL:regulates ubiquitin-protein ligase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0004842])] [Term] id: GO:0051438 ! regulation of ubiquitin ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0004842 ! ubiquitin-protein ligase activity synonym: "biological regulation of ubiquitin conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "biological regulation of ubiquitin ligase activity" EXACT [OBOL:automatic] synonym: "biological regulation of ubiquitin protein ligase activity" EXACT [OBOL:automatic] synonym: "biological regulation of ubiquitin protein-ligase activity" EXACT [OBOL:automatic] synonym: "biological regulation of ubiquitin-activating enzyme" EXACT [OBOL:automatic] synonym: "biological regulation of ubiquitin-conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "biological regulation of ubiquitin-ligase activity" EXACT [OBOL:automatic] synonym: "biological regulation of ubiquitin-protein ligase activity" EXACT [OBOL:automatic] synonym: "regulation of ubiquitin conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "regulation of ubiquitin protein ligase activity" EXACT [OBOL:automatic] synonym: "regulation of ubiquitin protein-ligase activity" EXACT [OBOL:automatic] synonym: "regulation of ubiquitin-activating enzyme" EXACT [OBOL:automatic] synonym: "regulation of ubiquitin-conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "regulation of ubiquitin-ligase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051438: 0.58 ! parsing: GO:0051439 ! Already have xp for: GO:0051439 regulation of ubiquitin ligase activity during mitotic cell cycle ! CURRENT : regulation of ubiquitin ligase activity that OBO_REL:part_of mitotic cell cycle [cdef(GO:0051438, [OBO_REL:part_of=GO:0000278])] ! parsing: GO:0051440 ! Already have xp for: GO:0051440 regulation of ubiquitin ligase activity during meiotic cell cycle ! CURRENT : regulation of ubiquitin ligase activity that OBO_REL:part_of meiotic cell cycle [cdef(GO:0051438, [OBO_REL:part_of=GO:0051321])] ! parsing: GO:0051441 ! Already have xp for: GO:0051441 positive regulation of ubiquitin ligase activity during meiotic cell cycle ! CURRENT : positive regulation of ubiquitin ligase activity that OBO_REL:part_of meiotic cell cycle [cdef(GO:0051443, [OBO_REL:part_of=GO:0051321])] ! parsing: GO:0051442 ! Already have xp for: GO:0051442 negative regulation of ubiquitin ligase activity during meiotic cell cycle ! CURRENT : negative regulation of ubiquitin ligase activity that OBO_REL:part_of meiotic cell cycle [cdef(GO:0051444, [OBO_REL:part_of=GO:0051321])] ! parsing: GO:0051443 ! parse: GO:0051443 using "positive regulation of ubiquitin ligase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004842]) [-2] ! no existing xp def ! def: "Any process that activates, maintains or increases the rate of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine." ! PROPOSED: biological regulation that OBO_REL:positively_regulates ubiquitin-protein ligase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0004842])] [Term] id: GO:0051443 ! positive regulation of ubiquitin ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0004842 ! ubiquitin-protein ligase activity synonym: "positive biological regulation of ubiquitin conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of ubiquitin ligase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of ubiquitin protein ligase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of ubiquitin protein-ligase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of ubiquitin-activating enzyme" EXACT [OBOL:automatic] synonym: "positive biological regulation of ubiquitin-conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of ubiquitin-ligase activity" EXACT [OBOL:automatic] synonym: "positive biological regulation of ubiquitin-protein ligase activity" EXACT [OBOL:automatic] synonym: "positive regulation of ubiquitin conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "positive regulation of ubiquitin protein ligase activity" EXACT [OBOL:automatic] synonym: "positive regulation of ubiquitin protein-ligase activity" EXACT [OBOL:automatic] synonym: "positive regulation of ubiquitin-activating enzyme" EXACT [OBOL:automatic] synonym: "positive regulation of ubiquitin-conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "positive regulation of ubiquitin-ligase activity" EXACT [OBOL:automatic] synonym: "positive regulation of ubiquitin-protein ligase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051443: 1.1 ! parsing: GO:0051444 ! parse: GO:0051444 using "negative regulation of ubiquitin ligase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004842]) [-2] ! no existing xp def ! def: "Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates ubiquitin-protein ligase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0004842])] [Term] id: GO:0051444 ! negative regulation of ubiquitin ligase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0004842 ! ubiquitin-protein ligase activity synonym: "negative biological regulation of ubiquitin conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of ubiquitin ligase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of ubiquitin protein ligase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of ubiquitin protein-ligase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of ubiquitin-activating enzyme" EXACT [OBOL:automatic] synonym: "negative biological regulation of ubiquitin-conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of ubiquitin-ligase activity" EXACT [OBOL:automatic] synonym: "negative biological regulation of ubiquitin-protein ligase activity" EXACT [OBOL:automatic] synonym: "negative regulation of ubiquitin conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "negative regulation of ubiquitin protein ligase activity" EXACT [OBOL:automatic] synonym: "negative regulation of ubiquitin protein-ligase activity" EXACT [OBOL:automatic] synonym: "negative regulation of ubiquitin-activating enzyme" EXACT [OBOL:automatic] synonym: "negative regulation of ubiquitin-conjugating enzyme activity" EXACT [OBOL:automatic] synonym: "negative regulation of ubiquitin-ligase activity" EXACT [OBOL:automatic] synonym: "negative regulation of ubiquitin-protein ligase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051444: 1.1 ! parsing: GO:0051487 ! Already have xp for: GO:0051487 anaphase-promoting complex activation during meiotic cell cycle ! CURRENT : anaphase-promoting complex activation that OBO_REL:part_of meiotic cell cycle [cdef(GO:0051488, [OBO_REL:part_of=GO:0051321])] ! parsing: GO:0051488 ! No parse for: GO:0051488 anaphase-promoting complex activation ! parsing: GO:0051671 ! No parse for: GO:0051671 induction of autolysin activity in another organism ! parsing: GO:0051972 ! parse: GO:0051972 using "regulation of telomerase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0003720]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Telomerases catalyze extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence." ! PROPOSED: biological regulation that OBO_REL:regulates telomerase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0003720])] [Term] id: GO:0051972 ! regulation of telomerase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0003720 ! telomerase activity synonym: "biological regulation of telomerase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051972: 0.55 ! parsing: GO:0051973 ! parse: GO:0051973 using "positive regulation of telomerase activity" => cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003720]) [-2] ! no existing xp def ! def: "Any process that activates or increases the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)." ! PROPOSED: biological regulation that OBO_REL:positively_regulates telomerase activity [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0003720])] [Term] id: GO:0051973 ! positive regulation of telomerase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:positively_regulates GO:0003720 ! telomerase activity synonym: "positive biological regulation of telomerase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051973: 1.1 ! parsing: GO:0051974 ! parse: GO:0051974 using "negative regulation of telomerase activity" => cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0003720]) [-2] ! no existing xp def ! def: "Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)." ! PROPOSED: biological regulation that OBO_REL:negatively_regulates telomerase activity [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0003720])] [Term] id: GO:0051974 ! negative regulation of telomerase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:negatively_regulates GO:0003720 ! telomerase activity synonym: "negative biological regulation of telomerase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051974: 1.1 ! parsing: GO:0052547 ! parse: GO:0052547 using "regulation of peptidase activity" => cdef(GO:0065007, [OBO_REL:regulates=GO:0008233]) [-2] ! no existing xp def ! def: "Any process that modulates the frequency, rate or extent of peptidase activity, the hydrolysis of peptide linkages within nucleic acids." ! PROPOSED: biological regulation that OBO_REL:regulates peptidase activity [cdef(GO:0065007, [OBO_REL:regulates=GO:0008233])] [Term] id: GO:0052547 ! regulation of peptidase activity intersection_of: GO:0065007 ! biological regulation intersection_of: OBO_REL:regulates GO:0008233 ! peptidase activity synonym: "biological regulation of hydrolase, acting on peptide bonds" EXACT [OBOL:automatic] synonym: "biological regulation of peptidase activity" EXACT [OBOL:automatic] synonym: "biological regulation of peptide hydrolase" EXACT [OBOL:automatic] synonym: "biological regulation of protease" EXACT [OBOL:automatic] synonym: "regulation of hydrolase, acting on peptide bonds" EXACT [OBOL:automatic] synonym: "regulation of peptide hydrolase" EXACT [OBOL:automatic] synonym: "regulation of protease" EXACT [OBOL:automatic] ! seconds spent parsing GO:0052547: 0.29 ! parsing: GO:0052548 ! No parse for: GO:0052548 regulation of protease activity ! parsing: GO:0065009 ! No parse for: GO:0065009 regulation of a molecular function ! anonymous primitive or inner classes created as by-products: