Gene Ontology: Ontology Comparison Report

Files used:

  • file 1 (old): go-2012-01-28.obo; date: 27:01:2012 13:07; CVS revision: 1.2570
  • file 2 (new): go-2012-02-04.obo; date: 03:02:2012 17:53; CVS revision: 1.2587

New terms

ID name namespace
GO:0038083 peptidyl-tyrosine autophosphorylation biological_process
GO:0038084 vascular endothelial growth factor signaling pathway biological_process
GO:0038085 vascular endothelial growth factor binding molecular_function
GO:0038086 VEGF-activated platelet-derived growth factor receptor signaling pathway biological_process
GO:0038087 VEGF-activated platelet-derived growth factor receptor-alpha signaling pathway biological_process
GO:0038088 VEGF-activated platelet-derived growth factor receptor-beta signaling pathway biological_process
GO:0038089 positive regulation of cell migration by vascular endothelial growth factor signaling pathway biological_process
GO:0038090 positive regulation of cell migration by VEGF-activated platelet derived growth factor receptor signaling pathway biological_process
GO:0038091 positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway biological_process
GO:0044488 modulation of voltage-gated sodium channel activity in other organism biological_process
GO:0044489 negative regulation of voltage-gated sodium channel activity in other organism biological_process
GO:0044490 positive regulation of voltage-gated sodium channel activity in other organism biological_process
GO:0044491 positive regulation of molecular function in other organism biological_process
GO:0044492 envenomation resulting in modulation of voltage-gated sodium channel activity in other organism biological_process
GO:0044493 envenomation resulting in negative regulation of voltage-gated sodium channel activity in other organism biological_process
GO:0044494 envenomation resulting in positive regulation of voltage-gated sodium channel activity in other organism biological_process
GO:0044495 modulation of blood pressure in other organism biological_process
GO:0044496 negative regulation of blood pressure in other organism biological_process
GO:0044497 positive regulation of blood pressure in other organism biological_process
GO:0044498 envenomation resulting in modulation of blood pressure in other organism biological_process
GO:0044499 envenomation resulting in positive regulation of blood pressure in other organism biological_process
GO:0044500 envenomation resulting in negative regulation of blood pressure in other organism biological_process
GO:0052869 arachidonic acid omega-hydroxylase activity molecular_function
GO:0052870 tocopherol omega-hydroxylase activity molecular_function
GO:0052871 alpha-tocopherol omega-hydroxylase activity molecular_function
GO:0052872 tocotrienol omega-hydroxylase activity molecular_function
GO:0061424 positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter biological_process
GO:0061425 positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter biological_process
GO:0061426 positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter biological_process
GO:0061427 negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter biological_process
GO:0097235 positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter biological_process
GO:0097236 positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation biological_process
GO:0097237 cellular response to toxin biological_process
GO:0097238 cellular response to methylglyoxal biological_process
GO:0097239 positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal biological_process
GO:1900083 regulation of Sertoli cell proliferation biological_process

Obsoletions

None

Term merges

None

Term changes

KEY: 'A' : added, 'D' : deleted, 'C' : changed (for properties with only one value)

Changes in term-related data
Term ID name def comment synonym is_a intersection_of disjoint_from relationship
Term ID name def comment synonym is_a intersection_of disjoint_from relationship
GO:0000038
very long-chain fatty acid metabolic process		 C C 1 A 1 D, 1 A
GO:0001579
medium-chain fatty acid transport		 C
GO:0001676
long-chain fatty acid metabolic process		 C
GO:0001792
polymeric immunoglobulin receptor activity		 C
GO:0001847
opsonin receptor activity		 C
GO:0003674
molecular_function		 2 A
GO:0004467
long-chain fatty acid-CoA ligase activity		 C
GO:0004875
complement receptor activity		 C
GO:0004896
cytokine receptor activity		 C
GO:0004897
ciliary neurotrophic factor receptor activity		 C
GO:0004900
erythropoietin receptor activity		 C
GO:0004902
granulocyte colony-stimulating factor receptor activity		 C
GO:0004903
growth hormone receptor activity		 C
GO:0004904
interferon receptor activity		 C
GO:0004918
interleukin-8 receptor activity		 C
GO:0004950
chemokine receptor activity		 C
GO:0005021
vascular endothelial growth factor-activated receptor activity		 C 1 D, 2 A
GO:0005024
transforming growth factor beta-activated receptor activity		 C
GO:0005056
tiggrin receptor activity		 C
GO:0005324
long-chain fatty acid transporter activity		 C
GO:0005575
cellular_component		 1 D, 1 A
GO:0008046
axon guidance receptor activity		 C
GO:0008066
glutamate receptor activity		 C
GO:0008150
biological_process		 2 D
GO:0008281
sulfonylurea receptor activity		 C
GO:0008288
boss receptor activity		 C
GO:0008922
long-chain fatty acid [acyl-carrier-protein] ligase activity		 C
GO:0009884
cytokinin receptor activity		 C
GO:0015464
acetylcholine receptor activity		 C
GO:0015483
long-chain fatty acid transporting porin activity		 C
GO:0015635
short-chain fatty acid transporter activity		 C
GO:0015636
short-chain fatty acid uptake transporter activity		 C
GO:0015909
long-chain fatty acid transport		 C
GO:0015910
peroxisomal long-chain fatty acid import		 C
GO:0015911
plasma membrane long-chain fatty acid transport		 C
GO:0015912
short-chain fatty acid transport		 C
GO:0015913
short-chain fatty acid import		 C
GO:0016167
glial cell-derived neurotrophic factor receptor activity		 C
GO:0016493
C-C chemokine receptor activity		 C
GO:0016494
C-X-C chemokine receptor activity		 C
GO:0016495
C-X3-C chemokine receptor activity		 C
GO:0016502
nucleotide receptor activity		 C
GO:0016509
long-chain-3-hydroxyacyl-CoA dehydrogenase activity		 C
GO:0016524
latrotoxin receptor activity		 C
GO:0016917
GABA receptor activity		 C
GO:0017002
activin-activated receptor activity		 C
GO:0017099
very-long-chain-acyl-CoA dehydrogenase activity		 C 1 D, 1 A
GO:0017154
semaphorin receptor activity		 C
GO:0019626
short-chain fatty acid catabolic process		 C
GO:0019763
immunoglobulin receptor activity		 C
GO:0020005
symbiont-containing vacuole membrane		 1 D
GO:0020006
symbiont-containing vacuolar membrane network		 2 D
GO:0021798
forebrain dorsal/ventral pattern formation		 1 D
GO:0030297
transmembrane receptor protein tyrosine kinase activator activity		 1 A
GO:0030369
ICAM-3 receptor activity		 C
GO:0031955
short-chain fatty acid-CoA ligase activity		 C
GO:0031956
medium-chain fatty acid-CoA ligase activity		 C
GO:0031957
very long-chain fatty acid-CoA ligase activity		 C 1 D, 1 A
GO:0032501
multicellular organismal process		 1 A
GO:0034188
apolipoprotein A-I receptor activity		 C
GO:0035336
long-chain fatty-acyl-CoA metabolic process		 C
GO:0035338
long-chain fatty-acyl-CoA biosynthetic process		 C
GO:0035380
very long-chain-3-hydroxyacyl-CoA dehydrogenase activity		 C 1 D, 1 A
GO:0035586
purinergic receptor activity		 C
GO:0035790
platelet-derived growth factor receptor-alpha signaling pathway		 C
GO:0035791
platelet-derived growth factor receptor-beta signaling pathway		 C
GO:0035940
negative regulation of peptidase activity in other organism		 1 D, 1 A
GO:0036041
long-chain fatty acid binding		 C
GO:0036042
long-chain fatty acyl-CoA binding		 C
GO:0038021
leptin receptor activity		 C
GO:0038033
positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway		 C C 3 D, 4 A 2 A 1 D
GO:0042758
long-chain fatty acid catabolic process		 C
GO:0042759
long-chain fatty acid biosynthetic process		 C
GO:0042760
very long-chain fatty acid catabolic process		 C 1 D, 1 A
GO:0042761
very long-chain fatty acid biosynthetic process		 C 1 D, 1 A
GO:0043296
apical junction complex		 C
GO:0046459
short-chain fatty acid metabolic process		 C
GO:0047474
long-chain fatty acid luciferin component ligase activity		 C
GO:0048010
vascular endothelial growth factor receptor signaling pathway		 C A 1 D
GO:0048756
sieve cell differentiation
GO:0051595
response to methylglyoxal		 C 1 A
GO:0051704
multi-organism process		 1 D
GO:0051790
short-chain fatty acid biosynthetic process		 C
GO:0051791
medium-chain fatty acid metabolic process		 C
GO:0051792
medium-chain fatty acid biosynthetic process		 C
GO:0051793
medium-chain fatty acid catabolic process		 C
GO:0052817
very long chain acyl-CoA hydrolase activity		 C 1 D, 1 A
GO:0052868
protein-lysine lysyltransferase activity		 C
GO:0061399
positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion		 C
GO:0070991
medium-chain-acyl-CoA dehydrogenase activity		 C
GO:0097193
intrinsic apoptotic signaling pathway		 C
GO:0097199
cysteine-type endopeptidase activity involved in apoptotic signaling pathway		 1 D, 2 A
GO:0097200
cysteine-type endopeptidase activity involved in execution phase of apoptosis		 1 D, 2 A
GO:0097217
sieve area		 A
GO:0097218
sieve plate		 A
GO:1900013
cellular response to potassium ion involved in chemotaxis to cAMP		 2 D
GO:1900014
cellular response to calcium ion involved in chemotaxis to cAMP		 1 D 2 D 1 D
GO:1900060
negative regulation of ceramide biosynthetic process		 C
GO:1900073
regulation of neuromuscular synaptic transmission
GO:1900074
negative regulation of neuromuscular synaptic transmission
GO:1900075
positive regulation of neuromuscular synaptic transmission
GO:2000303
regulation of ceramide biosynthetic process		 C
GO:2001267
regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway		 1 D, 1 A
GO:2001268
negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway		 1 D, 1 A
GO:2001269
positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway		 1 D, 1 A
GO:2001270
regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis		 1 D, 1 A
GO:2001271
negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis		 1 D, 1 A
GO:2001272
positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis		 1 D, 1 A

File Stats

Term counts for the old and new files
Ontology Old file New file Change
molecular function 9233
9233 (100.0%) defined 		9238
9238 (100.0%) defined 		+5
cellular component 2960
2960 (100.0%) defined 		2960
2960 (100.0%) defined 		0
biological process 21916
21916 (100.0%) defined 		21946
21946 (100.0%) defined 		+30
Obsolete 1611
(4.5% of total)		 1612
(4.5% of total)		 +1 (+0.1%)
Totals 34109
34109 (100.0%) defined
35720 inc. obsoletes 		34144
34144 (100.0%) defined
35756 inc. obsoletes 		+36 (+0.1%)

Ontology report info