Gene Ontology
Ontology Comparison Report
==========================

Files used:
- file 1 (old): go-2012-01-14.obo; date: 13:01:2012 15:54; CVS revision: 1.2512
- file 2 (new): go-2012-01-21.obo; date: 20:01:2012 15:15; CVS revision: 1.2535

NEW TERMS
=========

ID	name	namespace
GO:0002926	tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis.	biological_process
GO:0002927	archaeosine-tRNA biosynthetic process	biological_process
GO:0036093	germ cell proliferation	biological_process
GO:0036094	small molecule binding	molecular_function
GO:0038061	NIK/NF-kappaB cascade	biological_process
GO:0038062	protein tyrosine kinase collagen receptor activity	molecular_function
GO:0038063	collagen-activated tyrosine kinase receptor signaling pathway	biological_process
GO:0038064	collagen receptor activity	molecular_function
GO:0038065	collagen-activated signaling pathway	biological_process
GO:0044466	glutaryl-CoA hydrolase activity	molecular_function
GO:0044467	glial cell line-derived neurotrophic factor secretion	biological_process
GO:0044468	envenomation resulting in modulation of blood coagulation in other organism	biological_process
GO:0044469	envenomation resulting in positive regulation of blood coagulation in other organism	biological_process
GO:0044470	envenomation resulting in negative regulation of blood coagulation in other organism	biological_process
GO:0044471	envenomation resulting in pore formation in membrane of other organism	biological_process
GO:0044472	envenomation resulting in modulation of calcium channel activity in other organism	biological_process
GO:0044473	envenomation resulting in negative regulation of calcium channel activity in other organism	biological_process
GO:0044474	envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism	biological_process
GO:0044475	envenomation resulting in negative regulation of high voltage-gated calcium channel activity in other organism	biological_process
GO:0044476	envenomation resulting in negative regulation of low voltage-gated calcium channel activity in other organism	biological_process
GO:0044477	envenomation resulting in negative regulation of platelet aggregation in other organism	biological_process
GO:0044478	envenomation resulting in positive regulation of platelet aggregation in other organism	biological_process
GO:0044479	envenomation resulting in modulation of mast cell degranulation in other organism	biological_process
GO:0044480	envenomation resulting in positive regulation of mast cell degranulation in other organism	biological_process
GO:0044481	envenomation resulting in proteolysis in other organism	biological_process
GO:0044482	envenomation resulting in blood vessel extracellular matrix damage, causing hemorrhagic damage in other organism	biological_process
GO:0044483	envenomation resulting in impairment of hemostasis in other organism	biological_process
GO:0097221	MADS box-forkhead transcription factor complex	cellular_component
GO:1900013	cellular response to potassium ion involved in chemotaxis to cAMP	biological_process
GO:1900014	cellular response to calcium ion involved in chemotaxis to cAMP	biological_process
GO:1900031	regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling	biological_process
GO:1900034	regulation of cellular response to heat	biological_process
GO:1900035	negative regulation of cellular response to heat	biological_process
GO:1900036	positive regulation of cellular response to heat	biological_process
GO:1900037	regulation of cellular response to hypoxia	biological_process
GO:1900038	negative regulation of cellular response to hypoxia	biological_process
GO:1900039	positive regulation of cellular response to hypoxia	biological_process
GO:1900040	regulation of interleukin-2 secretion	biological_process
GO:1900041	negative regulation of interleukin-2 secretion	biological_process
GO:1900042	positive regulation of interleukin-2 secretion	biological_process
GO:1900044	regulation of protein K63-linked ubiquitination	biological_process
GO:1900045	negative regulation of protein K63-linked ubiquitination	biological_process
GO:1900046	regulation of hemostasis	biological_process
GO:1900047	negative regulation of hemostasis	biological_process
GO:1900048	positive regulation of hemostasis	biological_process
GO:1900049	regulation of histone exchange	biological_process
GO:1900050	negative regulation of histone exchange	biological_process
GO:1900051	positive regulation of histone exchange	biological_process
GO:1900052	regulation of retinoic acid biosynthetic process	biological_process
GO:1900053	negative regulation of retinoic acid biosynthetic process	biological_process
GO:1900054	positive regulation of retinoic acid biosynthetic process	biological_process


OBSOLETIONS
===========

None


TERM MERGES
===========

None


TERM CHANGES
============

KEY:  'A' : added, 'D' : deleted, 'C' : changed

Term ID	name	def	comment	synonym	is_a	intersection_of	relationship	
GO:0000124					1 A			
GO:0000166					1 D, 1 A			
GO:0000185							1 A	
GO:0000186							1 A	
GO:0001875		C						
GO:0001882					1 D, 1 A			
GO:0002054					1 D, 1 A			
GO:0002176					2 D, 1 A		1 D	
GO:0003130		C						
GO:0003154		C						
GO:0003269		C						
GO:0003302		C						
GO:0003303		C						
GO:0003434		C						
GO:0004704							1 A	
GO:0004970		C			1 A			
GO:0007167		C						
GO:0007168		C						
GO:0007169		C						
GO:0007178		C						
GO:0007179		C						
GO:0007185		C						
GO:0007186		C						
GO:0007215	C	C		1 A				
GO:0007216		C						
GO:0007219		C						
GO:0007224		C						
GO:0007229		C						
GO:0007249		C						
GO:0007250							1 A	
GO:0007254					2 D, 1 A			
GO:0007256							1 A	
GO:0008063		C						
GO:0008101		C						
GO:0008293		C						
GO:0019842					1 D, 1 A			
GO:0021777		C						
GO:0021919		C						
GO:0022024		C						
GO:0022025		C						
GO:0030193					1 A			
GO:0030194					1 A			
GO:0030195					1 A			
GO:0030509		C						
GO:0031663		C						
GO:0032924		C						
GO:0033209		C						
GO:0033210		C						
GO:0033219					1 A			
GO:0035235		C						
GO:0035385		C						
GO:0035463		C						
GO:0035655		C						
GO:0035691		C						
GO:0035723		C						
GO:0035738		C						
GO:0035771		C						
GO:0035772		C						
GO:0035806					1 A			
GO:0035807					1 A			
GO:0035892					1 A			
GO:0035893					1 A			
GO:0035895					1 A			
GO:0035896					1 A			
GO:0035897					1 A			
GO:0035899					1 A			
GO:0035915	C	C		1 A	1 D, 2 A			
GO:0035916					1 A			
GO:0035917					1 A			
GO:0036038	C	C		3 A				
GO:0038007		C						
GO:0038025		C						
GO:0038026		C						
GO:0038042		C						
GO:0038043		C						
GO:0038058		C						
GO:0042655							1 A	
GO:0043177					1 D, 1 A			
GO:0043178					1 D, 1 A			
GO:0044281		C	A					
GO:0044282		C	A					
GO:0044283		C	A					
GO:0044359					1 A			
GO:0044362					1 A			
GO:0044363					1 A			
GO:0044365		C		1 A	1 D, 1 A			
GO:0045500		C						
GO:0046328					2 D, 1 A			
GO:0046329					2 D, 1 A			
GO:0046330					2 D, 1 A			
GO:0048861		C						
GO:0051389							1 A	
GO:0051390							1 A	
GO:0051927					1 D, 1 A			
GO:0052204					1 D			
GO:0052205					1 D			
GO:0060337		C						
GO:0060490						2 A		
GO:0060599						2 A		
GO:0060660						2 A		
GO:0060680						2 A		
GO:0060797		C						
GO:0060803		C						
GO:0060826		C						
GO:0060835		C						
GO:0060869		C						
GO:0061057		C						
GO:0061149		C						
GO:0061151		C						
GO:0061312		C						
GO:0061353		C						
GO:0061372		C						
GO:0070102		C						
GO:0070106		C						
GO:0070757		C						
GO:0071847		C						
GO:0071893		C						
GO:0090010		C						
GO:0090247						2 A		
GO:2000728					1 D, 1 A			



FILE STATS
==========

Term counts for the old and new files

Ontology	Old file	New file	Change
molecular function	9208	9212	+4
	(9208 defined)	(9212 defined)	
cellular component	2949	2950	+1
	(2949 defined)	(2950 defined)	
biological process	21823	21867	+44
	(21823 defined)	(21867 defined)	

Obsolete	1609	1611	+2
	(4.5% of total)	 (4.5% of total)	(+0.1%)

Totals	33980	34029	+51 (+0.1%)
	33980 (100.0%) defined	34029 (100.0%) defined	
	35589 inc. obs	35640 inc. obs