Gene Ontology
Ontology Comparison Report
==========================

Files used:
- file 1 (old): go-2011-10-08.obo; date: 07:10:2011 17:16; CVS revision: 1.2307
- file 2 (new): go-2011-10-15.obo; date: 14:10:2011 16:31; CVS revision: 1.2327

NEW TERMS
=========

ID	name	namespace
GO:0036012	cyanelle inner membrane	cellular_component
GO:0036013	cyanelle outer membrane	cellular_component
GO:0036014	cyanelle intermembrane space	cellular_component
GO:0036015	response to interleukin-3	biological_process
GO:0036016	cellular response to interleukin-3	biological_process
GO:0036017	response to erythropoietin	biological_process
GO:0036018	cellular response to erythropoietin	biological_process
GO:0036019	endolysosome	cellular_component
GO:0036020	endolysosome membrane	cellular_component
GO:0036021	endolysosome lumen	cellular_component
GO:0036022	limb joint morphogenesis	biological_process
GO:0036023	embryonic skeletal limb joint morphogenesis	biological_process
GO:0097176	epoxide metabolic process	biological_process
GO:0097177	mitochondrial ribosome binding	molecular_function
GO:2001115	methanopterin metabolic process	biological_process
GO:2001116	methanopterin biosynthetic process	biological_process
GO:2001117	tetrahydromethanopterin metabolic process	biological_process
GO:2001118	tetrahydromethanopterin biosynthetic process	biological_process
GO:2001119	methanofuran metabolic process	biological_process
GO:2001120	methanofuran biosynthetic process	biological_process
GO:2001121	coenzyme gamma-F420-2 biosynthetic process	biological_process
GO:2001122	maltoheptaose metabolic process	biological_process
GO:2001123	maltoheptaose catabolic process	biological_process
GO:2001124	regulation of translational frameshifting	biological_process
GO:2001125	negative regulation of translational frameshifting	biological_process
GO:2001126	positive regulation of translational frameshifting	biological_process
GO:2001127	methane biosynthetic process from formic acid	biological_process
GO:2001128	methane biosynthetic process from methylamine	biological_process
GO:2001129	methane biosynthetic process from dimethylamine	biological_process
GO:2001130	methane biosynthetic process from trimethylamine	biological_process
GO:2001131	methane biosynthetic process from dimethyl sulfide	biological_process
GO:2001132	methane biosynthetic process from 3-(methylthio)propionic acid	biological_process
GO:2001133	methane biosynthetic process from methanethiol	biological_process
GO:2001134	methane biosynthetic process from carbon monoxide	biological_process
GO:2001135	regulation of endocytic recycling	biological_process
GO:2001136	negative regulation of endocytic recycling	biological_process
GO:2001137	positive regulation of endocytic recycling	biological_process
GO:2001138	regulation of phospholipid transport	biological_process
GO:2001139	negative regulation of phospholipid transport	biological_process
GO:2001140	positive regulation of phospholipid transport	biological_process


OBSOLETIONS
===========

None


TERM MERGES
===========

None


TERM CHANGES
============

KEY:  'A' : added, 'D' : deleted, 'C' : changed

Term ID	name	namespace	def	synonym	is_a	relationship	
GO:0000981						1 A	
GO:0000982						1 D	
GO:0000988						1 A	
GO:0001007						1 A	
GO:0001034						1 A	
GO:0001076						1 A	
GO:0001082						1 A	
GO:0001167						1 A	
GO:0003700						1 D	
GO:0004900						1 A	
GO:0004912						1 A	
GO:0006434						1 A	
GO:0006452					1 D, 1 A		
GO:0006915							
GO:0009842			C				
GO:0032488							
GO:0035111					1 A		
GO:0038025							
GO:0039503	C			1 A			
GO:0043021	C			2 A			
GO:0045087				1 A			
GO:0052033	C			1 A			
GO:0052034	C			1 A			
GO:0052157	C			1 A			
GO:0052166	C			1 A			
GO:0052167	C			1 A			
GO:0052169	C			1 A			
GO:0052170	C			1 A			
GO:0052257	C			1 A			
GO:0052258	C			1 A			
GO:0052296	C			1 A			
GO:0052305	C			1 A			
GO:0052306	C			1 D, 1 A			
GO:0052308	C			1 A			
GO:0052309	C						
GO:0052382	C			2 D, 1 A			
GO:0052390	C			1 A			
GO:0052763			C				
GO:0052799		C					
GO:0052800		C					
GO:0052801		C					
GO:0052802		C					
GO:0052803		C					
GO:0052804		C					
GO:0052805		C					
GO:0060272			C				
GO:0061091					1 D, 1 A		
GO:0061092					1 D, 1 A		
GO:0061093					1 D, 1 A		
GO:0071889							
GO:0097056			C		1 D, 1 A		



FILE STATS
==========

Term counts for the old and new files

Ontology	Old file	New file	Change
molecular function	9147	9141	-6
	(9147 defined)	(9141 defined)	
cellular component	2900	2906	+6
	(2900 defined)	(2906 defined)	
biological process	21464	21504	+40
	(21464 defined)	(21504 defined)	

Obsolete	1587	1587	0
	(4.5% of total)	 (4.5% of total)	(0.0%)

Totals	33511	33551	+40 (+0.1%)
	33511 (100.0%) defined	33551 (100.0%) defined	
	35098 inc. obs	35138 inc. obs