Gene Ontology: Ontology Comparison Report

Files used:

  • file 1 (old): go-2011-08-06.obo; date: 05:08:2011 14:39; CVS revision: 1.2155
  • file 2 (new): go-2011-08-13.obo; date: 12:08:2011 16:34; CVS revision: 1.2181

New terms

ID name namespace
GO:0002190 cap-independent translational initiation biological_process
GO:0002191 cap-dependent translational initiation biological_process
GO:0002192 IRES-dependent translational initiation biological_process
GO:0002193 MAML1-RBP-Jkappa- ICN1 complex cellular_component
GO:0035970 peptidyl-threonine dephosphorylation biological_process
GO:0035971 peptidyl-histidine dephosphorylation biological_process
GO:0035973 aggrephagy biological_process
GO:0044350 micropinocytosis biological_process
GO:0044351 macropinocytosis biological_process
GO:0044352 pinosome cellular_component
GO:0044353 micropinosome cellular_component
GO:0044354 macropinosome cellular_component
GO:0044355 clearance of foreign intracellular DNA biological_process
GO:0044356 clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine biological_process
GO:0052711 ergothioneine biosynthesis from N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biological_process
GO:0052712 inositol phosphosphingolipid phospholipase activity molecular_function
GO:0052713 inositol phosphorylceramide phospholipase activity molecular_function
GO:0052714 mannosyl-inositol phosphorylceramide phospholipase activity molecular_function
GO:0052715 mannosyl-diinositol phosphorylceramide phospholipase activity molecular_function
GO:0052716 hydroquinone:oxygen oxidoreductase activity molecular_function
GO:0052717 tRNA-specific adenosine-34 deaminase activity molecular_function
GO:0052718 tRNA-specific adenosine-34 deaminase complex cellular_component
GO:0072689 MCM complex assembly biological_process
GO:0080181 lateral root branching biological_process
GO:0080182 histone H3-K4 trimethylation biological_process
GO:0080183 response to photooxidative stress biological_process
GO:0080184 response to phenylpropanoid biological_process
GO:0080185 effector dependent induction by symbiont of host immune response biological_process
GO:0090411 brassinosteroid binding molecular_function
GO:0097151 positive regulation of inhibitory postsynaptic membrane potential biological_process
GO:2000986 negative regulation of behavioral fear response biological_process
GO:2000987 positive regulation of behavioral fear response biological_process
GO:2000988 regulation of hemicellulose catabolic process biological_process
GO:2000989 negative regulation of hemicellulose catabolic process biological_process
GO:2000990 positive regulation of hemicellulose catabolic process biological_process
GO:2000991 regulation of galactomannan catabolic process biological_process
GO:2000992 negative regulation of galactomannan catabolic process biological_process
GO:2000993 positive regulation of galactomannan catabolic process biological_process
GO:2000994 regulation of mannan catabolic process biological_process
GO:2000995 negative regulation of mannan catabolic process biological_process
GO:2000996 positive regulation of mannan catabolic process biological_process
GO:2000997 regulation of cellulose catabolic process biological_process
GO:2000998 negative regulation of cellulose catabolic process biological_process
GO:2000999 positive regulation of cellulose catabolic process biological_process
GO:2001000 regulation of xylan catabolic process biological_process
GO:2001001 negative regulation of xylan catabolic process biological_process
GO:2001002 positive regulation of xylan catabolic process biological_process
GO:2001003 regulation of pectin catabolic process biological_process
GO:2001004 negative regulation of pectin catabolic process biological_process
GO:2001005 positive regulation of pectin catabolic process biological_process
GO:2001006 regulation of cellulose biosynthetic process biological_process
GO:2001007 negative regulation of cellulose biosynthetic process biological_process
GO:2001008 positive regulation of cellulose biosynthetic process biological_process
GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process biological_process
GO:2001010 negative regulation of plant-type cell wall cellulose biosynthetic process biological_process
GO:2001011 positive regulation of plant-type cell wall cellulose biosynthetic process biological_process
GO:2001012 mesenchymal cell differentiation involved in renal system development biological_process
GO:2001014 regulation of skeletal muscle cell differentiation biological_process
GO:2001015 negative regulation of skeletal muscle cell differentiation biological_process
GO:2001016 positive regulation of skeletal muscle cell differentiation biological_process

Obsoletions

ID name namespace
GO:0018853 perillyl-CoA synthetase activity
Consider: GO:0052685, GO:0052686
This term was made obsolete because it represents two reactions. 		molecular_function

Term merges

Old ID Old name Merged into Merged term name
GO:0006345loss of chromatin silencingGO:0031936negative regulation of chromatin silencing
GO:0051768nitric-oxide synthase 2 biosynthetic processGO:0051767nitric-oxide synthase biosynthetic process
GO:0051772regulation of nitric-oxide synthase 2 biosynthetic processGO:0051769regulation of nitric-oxide synthase biosynthetic process
GO:0051773positive regulation of nitric-oxide synthase 2 biosynthetic processGO:0051770positive regulation of nitric-oxide synthase biosynthetic process
GO:0051774negative regulation of nitric-oxide synthase 2 biosynthetic processGO:0051771negative regulation of nitric-oxide synthase biosynthetic process

Term changes

Changes in term-related data
File 1 (05:08:2011 14:39, 1.2155) File 2 (12:08:2011 16:34, 1.2181)
GO:0000050 : urea cycle
relationship
has_part GO:0004086
GO:0000054 : ribosomal subunit export from nucleus
subset
goslim_yeast
GO:0000127 : transcription factor TFIIIC complex
def
A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species.
 def
A heterotrimeric transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species. It also functions as a boundary element to partition genome content into distinct domains outside Pol III promoter regions.
GO:0000278 : mitotic cell cycle
subset
goslim_yeast
GO:0000902 : cell morphogenesis
subset
goslim_yeast
GO:0000988 : protein binding transcription factor activity
subset
goslim_yeast
GO:0001071 : nucleic acid binding transcription factor activity
subset
goslim_yeast
GO:0001308 : negative regulation of chromatin silencing involved in replicative cell aging
name
loss of chromatin silencing involved in replicative cell aging
is_a
GO:0006345
intersection_of
GO:0006345
 name
negative regulation of chromatin silencing involved in replicative cell aging
synonym
"loss of chromatin silencing involved in replicative cell aging" EXACT []
is_a
GO:0031936
intersection_of
GO:0065007
negatively_regulates GO:0006342
GO:0001403 : invasive growth in response to glucose limitation
subset
goslim_yeast
GO:0002181 : cytoplasmic translation
subset
goslim_yeast
GO:0003729 : mRNA binding
subset
goslim_yeast
GO:0003735 : structural constituent of ribosome
subset
goslim_yeast
GO:0003774 : motor activity
subset
goslim_yeast
GO:0003918 : DNA topoisomerase (ATP-hydrolyzing) activity
is_a
GO:0008094
GO:0003924 : GTPase activity
subset
goslim_yeast
GO:0003990 : acetylcholinesterase activity
is_a
GO:0052689
 is_a
GO:0004104
GO:0004518 : nuclease activity
subset
goslim_yeast
GO:0004672 : protein kinase activity
subset
goslim_yeast
GO:0004721 : phosphoprotein phosphatase activity
subset
goslim_yeast
GO:0005215 : transporter activity
subset
goslim_yeast
GO:0005515 : protein binding
subset
goslim_yeast
GO:0005643 : nuclear pore
synonym
"nucleopore" EXACT [GOC:al, PMID:7603572]
GO:0005975 : carbohydrate metabolic process
subset
goslim_yeast
GO:0006259 : DNA metabolic process
subset
goslim_yeast
GO:0006260 : DNA replication
subset
goslim_yeast
GO:0006281 : DNA repair
subset
goslim_yeast
GO:0006310 : DNA recombination
subset
goslim_yeast
GO:0006325 : chromatin organization
subset
goslim_yeast
GO:0006352 : transcription initiation, DNA-dependent
subset
goslim_yeast
GO:0006353 : transcription termination, DNA-dependent
subset
goslim_yeast
GO:0006354 : transcription elongation, DNA-dependent
subset
goslim_yeast
GO:0006360 : transcription from RNA polymerase I promoter
subset
goslim_yeast
GO:0006364 : rRNA processing
subset
goslim_yeast
GO:0006366 : transcription from RNA polymerase II promoter
subset
goslim_yeast
GO:0006383 : transcription from RNA polymerase III promoter
subset
goslim_yeast
GO:0006397 : mRNA processing
subset
goslim_yeast
GO:0006401 : RNA catabolic process
subset
goslim_yeast
GO:0006412 : translation
subset
goslim_yeast
GO:0006413 : translational initiation
subset
goslim_yeast
GO:0006414 : translational elongation
subset
goslim_yeast
GO:0006417 : regulation of translation
subset
goslim_yeast
GO:0006418 : tRNA aminoacylation for protein translation
subset
goslim_yeast
GO:0006464 : protein modification process
subset
goslim_yeast
GO:0006468 : protein phosphorylation
subset
goslim_yeast
GO:0006470 : protein dephosphorylation
subset
goslim_yeast
GO:0006486 : protein glycosylation
subset
goslim_yeast
GO:0006497 : protein lipidation
subset
goslim_yeast
GO:0006520 : cellular amino acid metabolic process
subset
goslim_yeast
GO:0006605 : protein targeting
subset
goslim_yeast
GO:0006629 : lipid metabolic process
subset
goslim_yeast
GO:0006725 : cellular aromatic compound metabolic process
subset
goslim_yeast
GO:0006810 : transport
subset
goslim_yeast
GO:0006811 : ion transport
subset
goslim_yeast
GO:0006865 : amino acid transport
subset
goslim_yeast
GO:0006869 : lipid transport
subset
goslim_yeast
GO:0006873 : cellular ion homeostasis
subset
goslim_yeast
GO:0006887 : exocytosis
subset
goslim_yeast
GO:0006897 : endocytosis
subset
goslim_yeast
GO:0006907 : pinocytosis
def
An endocytosis process that results in the uptake of liquid material by cells from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.
synonym
"clathrin-independent pinocytosis" NARROW []
 def
An endocytosis process that results in the uptake of liquid material by cells from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, called pinosomes, formed by invagination of the plasma membrane.
synonym
"clathrin-independent pinocytosis" BROAD []
GO:0006950 : response to stress
subset
goslim_yeast
GO:0006970 : response to osmotic stress
subset
goslim_yeast
GO:0006974 : response to DNA damage stimulus
subset
goslim_yeast
GO:0006979 : response to oxidative stress
subset
goslim_yeast
GO:0007018 : microtubule-based movement
is_a
GO:0006928
GO:0007049 : cell cycle
subset
goslim_yeast
GO:0007126 : meiosis
subset
goslim_yeast
GO:0007165 : signal transduction
subset
goslim_yeast
GO:0008033 : tRNA processing
subset
goslim_yeast
GO:0008090 : retrograde axon cargo transport
synonym
"retrograde axonal transport" RELATED []
 synonym
"retrograde axonal transport" EXACT []
GO:0008092 : cytoskeletal protein binding
subset
goslim_yeast
GO:0008134 : transcription factor binding
subset
goslim_yeast
GO:0008135 : translation factor activity, nucleic acid binding
subset
goslim_yeast
GO:0008168 : methyltransferase activity
subset
goslim_yeast
GO:0008213 : protein alkylation
subset
goslim_yeast
GO:0008380 : RNA splicing
subset
goslim_yeast
GO:0008565 : protein transporter activity
subset
goslim_yeast
GO:0008643 : carbohydrate transport
subset
goslim_yeast
GO:0008657 : DNA topoisomerase (ATP-hydrolyzing) inhibitor activity
is_a
GO:0004857
 is_a
GO:0042030
GO:0072586
relationship
negatively_regulates GO:0003918
part_of GO:2000372
GO:0008886 : glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity
name
glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity
 name
glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity
GO:0009307 : DNA restriction-modification system
def
Any process that protects an organism from invading foreign DNA by methylation of self DNA at specific sequences and nucleolytic cleavage of unmethylated foreign DNA.
 def
A defense process found in many bacteria and archaea that protects the organism from invading foreign DNA by cleaving it with a restriction endonuclease. The organism's own DNA is protected by methylation of a specific nucleotide, which occurs immediately following replication, in the same target site as the restriction enzyme.
is_a
GO:0044355
GO:0009311 : oligosaccharide metabolic process
subset
goslim_yeast
GO:0009408 : response to heat
subset
goslim_yeast
GO:0009451 : RNA modification
subset
goslim_yeast
GO:0010324 : membrane invagination
subset
goslim_yeast
GO:0010830 : regulation of myotube differentiation
is_a
GO:2001014
GO:0010831 : positive regulation of myotube differentiation
is_a
GO:0051155
 is_a
GO:2001016
GO:0010832 : negative regulation of myotube differentiation
is_a
GO:0051154
 is_a
GO:2001015
GO:0015931 : nucleobase, nucleoside, nucleotide and nucleic acid transport
subset
goslim_yeast
GO:0016044 : cellular membrane organization
subset
goslim_yeast
GO:0016070 : RNA metabolic process
subset
goslim_yeast
GO:0016192 : vesicle-mediated transport
subset
goslim_yeast
GO:0016197 : endosome transport
subset
goslim_yeast
GO:0016301 : kinase activity
subset
goslim_yeast
GO:0016570 : histone modification
subset
goslim_yeast
GO:0016740 : transferase activity
subset
goslim_yeast
GO:0016746 : transferase activity, transferring acyl groups
subset
goslim_yeast
GO:0016757 : transferase activity, transferring glycosyl groups
subset
goslim_yeast
GO:0016765 : transferase activity, transferring alkyl or aryl (other than methyl) groups
subset
goslim_yeast
GO:0016787 : hydrolase activity
subset
goslim_yeast
GO:0016791 : phosphatase activity
subset
goslim_yeast
GO:0016798 : hydrolase activity, acting on glycosyl bonds
subset
goslim_yeast
GO:0016810 : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
subset
goslim_yeast
GO:0016887 : ATPase activity
subset
goslim_yeast
GO:0018193 : peptidyl-amino acid modification
subset
goslim_yeast
GO:0018853 : perillyl-CoA synthetase activity
def
Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + perillyl-CoA.
is_a
GO:0016405
GO:0016878
 def
OBSOLETE. Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + perillyl-CoA.
comment
This term was made obsolete because it represents two reactions.
is_obsolete
true
consider
GO:0052685
GO:0052686
GO:0019725 : cellular homeostasis
subset
goslim_yeast
GO:0019843 : rRNA binding
subset
goslim_yeast
GO:0019899 : enzyme binding
subset
goslim_yeast
GO:0022857 : transmembrane transporter activity
subset
goslim_yeast
GO:0023052 : signaling
subset
goslim_yeast
GO:0030048 : actin filament-based movement
is_a
GO:0006928
GO:0030144 : alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity
name
alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity
 name
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity
synonym
"alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity" EXACT []
GO:0030435 : sporulation resulting in formation of a cellular spore
subset
goslim_yeast
GO:0030528 : transcription regulator activity
subset
goslim_yeast
GO:0030555 : RNA modification guide activity
subset
goslim_yeast
GO:0030674 : protein binding, bridging
subset
goslim_yeast
GO:0031399 : regulation of protein modification process
subset
goslim_yeast
GO:0031505 : fungal-type cell wall organization
subset
goslim_yeast
GO:0031936 : negative regulation of chromatin silencing
alt_id
GO:0006345
synonym
"loss of chromatin silencing" EXACT []
GO:0032182 : small conjugating protein binding
subset
goslim_yeast
GO:0032200 : telomere organization
subset
goslim_yeast
GO:0032542 : sulfiredoxin activity
is_a
GO:0016209
GO:0032543 : mitochondrial translation
subset
goslim_yeast
GO:0032989 : cellular component morphogenesis
subset
goslim_yeast
GO:0033043 : regulation of organelle organization
subset
goslim_yeast
GO:0042254 : ribosome biogenesis
subset
goslim_yeast
GO:0042255 : ribosome assembly
subset
goslim_yeast
GO:0042273 : ribosomal large subunit biogenesis
subset
goslim_yeast
GO:0042274 : ribosomal small subunit biogenesis
subset
goslim_yeast
GO:0042393 : histone binding
subset
goslim_yeast
GO:0042594 : response to starvation
subset
goslim_yeast
GO:0043144 : snoRNA processing
subset
goslim_yeast
GO:0043167 : ion binding
subset
goslim_yeast
GO:0043543 : protein acylation
subset
goslim_yeast
GO:0043934 : sporulation
subset
goslim_yeast
GO:0044005 : induction by symbiont in host of tumor, nodule, or growth
def
The process in which an organism causes the formation of an abnormal mass of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
 def
The process in which an organism causes the formation of a mass of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
GO:0044006 : induction by symbiont in host of tumor, nodule, or growth containing transformed cells
def
The process in which an organism causes the formation in its host organism of an abnormal growth whose cells have been transformed and continue to exist in the absence of the first organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
 def
The process in which an organism causes the formation in its host organism of a growth whose cells have been transformed and continue to exist in the absence of the first organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
GO:0044255 : cellular lipid metabolic process
subset
goslim_yeast
GO:0044257 : cellular protein catabolic process
subset
goslim_yeast
GO:0044262 : cellular carbohydrate metabolic process
subset
goslim_yeast
GO:0045182 : translation regulator activity
subset
goslim_yeast
GO:0046483 : heterocycle metabolic process
subset
goslim_yeast
GO:0047253 : alpha-1,6-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
name
alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity
 name
alpha-1,6-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
synonym
"alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity" EXACT []
GO:0048193 : Golgi vesicle transport
subset
goslim_yeast
GO:0048284 : organelle fusion
subset
goslim_yeast
GO:0048285 : organelle fission
subset
goslim_yeast
GO:0048308 : organelle inheritance
subset
goslim_yeast
GO:0051037 : regulation of transcription during meiosis
relationship
part_of GO:0007126
GO:0051049 : regulation of transport
subset
goslim_yeast
GO:0051052 : regulation of DNA metabolic process
subset
goslim_yeast
GO:0051082 : unfolded protein binding
subset
goslim_yeast
GO:0051169 : nuclear transport
subset
goslim_yeast
GO:0051276 : chromosome organization
subset
goslim_yeast
GO:0051321 : meiotic cell cycle
subset
goslim_yeast
GO:0051603 : proteolysis involved in cellular protein catabolic process
subset
goslim_yeast
GO:0051604 : protein maturation
subset
goslim_yeast
GO:0051726 : regulation of cell cycle
subset
goslim_yeast
GO:0051767 : nitric-oxide synthase biosynthetic process
def
The chemical reactions and pathways resulting in the formation of nitric-oxide synthase, an enzyme which catalyzes the reaction L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+.
 alt_id
GO:0051768
def
The chemical reactions and pathways resulting in the formation of a nitric-oxide synthase, an enzyme which catalyzes the reaction L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+.
synonym
"brain nitric-oxide synthase biosynthetic process" NARROW [GOC:bf]
"endothelial nitric-oxide synthase biosynthetic process" NARROW [GOC:bf]
"inducible nitric-oxide synthase biosynthetic process" NARROW [GOC:bf]
"nitric-oxide synthase (type 2) biosynthesis" NARROW []
"nitric-oxide synthase (type 2) biosynthetic process" NARROW []
"nitric-oxide synthase (type II) biosynthesis" NARROW []
"nitric-oxide synthase (type II) biosynthetic process" NARROW []
"nitric-oxide synthase 2 biosynthetic process" NARROW []
"nitric-oxide synthase-1 biosynthetic process" NARROW [GOC:bf]
"nitric-oxide synthase-2 biosynthetic process" NARROW [GOC:bf]
"nitric-oxide synthase-3 biosynthetic process" NARROW [GOC:bf]
"NOS1 biosynthesis" NARROW [GOC:bf]
"NOS2 biosynthesis" NARROW [GOC:bf]
"NOS2 synthase biosynthesis" NARROW []
"NOS2 synthase biosynthetic process" NARROW []
"NOS3 biosynthesis" NARROW [GOC:bf]
GO:0051769 : regulation of nitric-oxide synthase biosynthetic process
def
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme nitric-oxide synthase.
 alt_id
GO:0051772
def
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.
synonym
"regulation of nitric-oxide synthase (type 2) biosynthesis" NARROW []
"regulation of nitric-oxide synthase (type 2) biosynthetic process" NARROW []
"regulation of nitric-oxide synthase (type II) biosynthesis" NARROW []
"regulation of nitric-oxide synthase (type II) biosynthetic process" NARROW []
"regulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"regulation of NOS2 synthase biosynthesis" NARROW []
"regulation of NOS2 synthase biosynthetic process" NARROW []
GO:0051770 : positive regulation of nitric-oxide synthase biosynthetic process
def
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme nitric oxide synthase.
 alt_id
GO:0051773
def
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric oxide synthase enzyme.
synonym
"activation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"positive regulation of nitric-oxide synthase (type 2) biosynthesis" NARROW []
"positive regulation of nitric-oxide synthase (type 2) biosynthetic process" NARROW []
"positive regulation of nitric-oxide synthase (type II) biosynthesis" NARROW []
"positive regulation of nitric-oxide synthase (type II) biosynthetic process" NARROW []
"positive regulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"positive regulation of NOS2 synthase biosynthesis" NARROW []
"positive regulation of NOS2 synthase biosynthetic process" NARROW []
"stimulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"up regulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"up-regulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"upregulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
GO:0051771 : negative regulation of nitric-oxide synthase biosynthetic process
def
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme nitric-oxide synthase.
 alt_id
GO:0051774
def
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.
synonym
"down regulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"down-regulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"downregulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"inhibition of nitric-oxide synthase 2 biosynthetic process" NARROW []
"negative regulation of nitric-oxide synthase (type 2) biosynthesis" NARROW []
"negative regulation of nitric-oxide synthase (type 2) biosynthetic process" NARROW []
"negative regulation of nitric-oxide synthase (type II) biosynthesis" NARROW []
"negative regulation of nitric-oxide synthase (type II) biosynthetic process" NARROW []
"negative regulation of nitric-oxide synthase 2 biosynthetic process" NARROW []
"negative regulation of NOS2 synthase biosynthesis" NARROW []
"negative regulation of NOS2 synthase biosynthetic process" NARROW []
GO:0051819 : induction of tumor, nodule, or growth in other organism involved in symbiotic interaction
def
The process in which an organism causes the formation of an abnormal mass of cells in a second organism, where the two organisms are in a symbiotic interaction.
 def
The process in which an organism causes the formation of a mass of cells in a second organism, where the two organisms are in a symbiotic interaction.
GO:0051820 : induction of tumor, nodule, or growth containing transformed cells in other organism involved in symbiotic interaction
def
The process in which an organism causes the formation in a second organism of an abnormal growth whose cells have been transformed and continue to exist in the absence of the first organism, where the two organisms are in a symbiotic interaction.
 def
The process in which an organism causes the formation in a second organism of a growth whose cells have been transformed and continue to exist in the absence of the first organism, where the two organisms are in a symbiotic interaction.
GO:0052707 : N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis from histidine
name
histidine catabolic process to N-alpha,N-alpha,N-alpha-trimethyl-L-histidine
 name
N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis from histidine
synonym
"hercynine biosynthesis from histidine" EXACT []
"histidine betaine biosynthesis from histidine" EXACT []
relationship
has_part GO:0052704
GO:0055085 : transmembrane transport
subset
goslim_yeast
GO:0055086 : nucleobase, nucleoside and nucleotide metabolic process
subset
goslim_yeast
GO:0060080 : regulation of inhibitory postsynaptic membrane potential
def
Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.
 def
Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.
GO:0061025 : membrane fusion
subset
goslim_yeast
GO:0070647 : protein modification by small protein conjugation or removal
subset
goslim_yeast
GO:0070925 : organelle assembly
subset
goslim_yeast
GO:0071554 : cell wall organization or biogenesis
subset
goslim_yeast
GO:0072161 : mesenchymal cell differentiation involved in kidney development
is_a
GO:0048762
 is_a
GO:2001012
GO:0072583 : clathrin-mediated endocytosis
is_a
GO:0006897
 is_a
GO:0006898
GO:0072584 : caveolin-mediated endocytosis
is_a
GO:0006897
 is_a
GO:0006898
GO:0072586 : DNA topoisomerase (ATP-hydrolyzing) regulator activity
is_a
GO:0030234
 is_a
GO:0060590
GO:0072587 : DNA topoisomerase (ATP-hydrolyzing) activator activity
is_a
GO:0008047
 is_a
GO:0001671
GO:0080066 : 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity
xref
MetaCyc:RXN-2209
GO:0080067 : 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity
xref
MetaCyc:RXNQT-4329
GO:0080068 : 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity
xref
MetaCyc:RXNQT-4330
GO:0080069 : 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity
xref
MetaCyc:RXNQT-4332
GO:0080070 : 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity
xref
MetaCyc:RXNQT-4333
GO:0080071 : indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity
xref
MetaCyc:RXN-1443
GO:0090404 : pollen tube tip
GO:0090406 : pollen tube
GO:2000371 : regulation of DNA topoisomerase (ATP-hydrolyzing) activity
is_a
GO:0043462
GO:2000372 : negative regulation of DNA topoisomerase (ATP-hydrolyzing) activity
is_a
GO:0043086
 is_a
GO:0032780
GO:2000373 : positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
is_a
GO:0032781
GO:2000898 : regulation of glucomannan catabolic process
is_a
GO:0010981
GO:0043471
GO:2000924
 is_a
GO:2000994
GO:2000907 : negative regulation of glucomannan catabolic process
is_a
GO:0010677
GO:0031330
GO:2000925
 is_a
GO:2000995
GO:2000908 : positive regulation of glucomannan catabolic process
is_a
GO:0010676
GO:0031331
GO:2000926
 is_a
GO:2000996
GO:2000912 : regulation of galactoglucomannan catabolic process
is_a
GO:0010981
GO:0043471
GO:2000924
 is_a
GO:2000994
GO:2000913 : negative regulation of galactoglucomannan catabolic process
is_a
GO:0010677
GO:0031330
GO:2000925
 is_a
GO:2000995
GO:2000914 : positive regulation of galactoglucomannan catabolic process
is_a
GO:0010676
GO:0031331
GO:2000926
 is_a
GO:2000996
GO:2000915 : regulation of glucuronoxylan catabolic process
is_a
GO:0010981
GO:2000924
 is_a
GO:2001000
GO:2000916 : negative regulation of glucuronoxylan catabolic process
is_a
GO:2000925
 is_a
GO:2001001
GO:2000917 : positive regulation of glucuronoxylan catabolic process
is_a
GO:2000926
 is_a
GO:2001002
GO:2000918 : regulation of glucuronoarabinoxylan catabolic process
is_a
GO:0010981
GO:2000924
 is_a
GO:2001000
GO:2000919 : negative regulation of glucuronoarabinoxylan catabolic process
is_a
GO:2000925
 is_a
GO:2001001
GO:2000920 : positive regulation of glucuronoarabinoxylan catabolic process
is_a
GO:2000926
 is_a
GO:2001002
GO:2000921 : regulation of arabinoxylan catabolic process
is_a
GO:0010981
GO:2000924
 is_a
GO:2001000
GO:2000922 : negative regulation of arabinoxylan catabolic process
is_a
GO:2000925
 is_a
GO:2001001
GO:2000923 : positive regulation of arabinoxylan catabolic process
is_a
GO:2000926
 is_a
GO:2001002
GO:2000930 : regulation of cellobiose metabolic process
synonym
"regulation of cellose metabolism" EXACT [GOC:obol]
 synonym
"regulation of cellobiose metabolism" EXACT [GOC:obol]
GO:2000931 : negative regulation of cellobiose metabolic process
synonym
"negative regulation of cellose metabolism" EXACT [GOC:obol]
 synonym
"negative regulation of cellobiose metabolism" EXACT [GOC:obol]
GO:2000932 : positive regulation of cellobiose metabolic process
synonym
"positive regulation of cellose metabolism" EXACT [GOC:obol]
 synonym
"positive regulation of cellobiose metabolism" EXACT [GOC:obol]

File Stats

Term counts for the old and new files
Ontology Old file New file Change
molecular function 9037
9037 (100.0%) defined 		9043
9043 (100.0%) defined 		+6
cellular component 2887
2887 (100.0%) defined 		2892
2892 (100.0%) defined 		+5
biological process 21274
21274 (100.0%) defined 		21317
21317 (100.0%) defined 		+43
Obsolete 1563
(4.5% of total)		 1564
(4.5% of total)		 +1 (+0.1%)
Totals 33198
33198 (100.0%) defined
34761 inc. obsoletes 		33252
33252 (100.0%) defined
34816 inc. obsoletes 		+55 (+0.2%)

Ontology report info