Ontology Comparison Report

Files used:

file 1 (old): go-2011-06-25.obo; date: 24:06:2011 15:09; CVS revision: 1.2067
file 2 (new): go-2011-07-02.obo; date: 01:07:2011 14:52; CVS revision: 1.2074

New terms
Obsoletions
Term merges
Term changes
File Stats

New terms

ID	name	namespace
GO:0002189	ribose phosphate diphosphokinase complex	cellular_component
GO:0035915	pore complex assembly in other organism	biological_process
GO:0035916	modulation of calcium channel activity in other organism	biological_process
GO:0035917	negative regulation of calcium channel activity in other organism	biological_process
GO:0035918	negative regulation of voltage-gated calcium channel activity in other organism	biological_process
GO:0035919	negative regulation of low voltage-gated calcium channel activity in other organism	biological_process
GO:0035920	negative regulation of high voltage-gated calcium channel activity in other organism	biological_process
GO:0038021	leptin receptor activity	molecular_function
GO:0038022	olfactory receptor activity, G-protein coupled	molecular_function
GO:0097089	methyl-branched fatty acid metabolic process	biological_process
GO:2000794	regulation of epithelial cell proliferation involved in lung morphogenesis	biological_process
GO:2000795	negative regulation of epithelial cell proliferation involved in lung morphogenesis	biological_process
GO:2000796	Notch signaling pathway involved in negative regulation of venous endothelial cell fate commitment	biological_process
GO:2000797	regulation of amniotic stem cell differentiation	biological_process
GO:2000798	negative regulation of amniotic stem cell differentiation	biological_process
GO:2000799	positive regulation of amniotic stem cell differentiation	biological_process
GO:2000800	regulation of endocardial cushion to mesenchymal transition involved in heart valve formation	biological_process
GO:2000801	negative regulation of endocardial cushion to mesenchymal transition involved in heart valve formation	biological_process
GO:2000802	positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation	biological_process
GO:2000803	endosomal signal transduction	biological_process

Obsoletions

None

Term merges

Old ID	Old name	Merged into	Merged term name
GO:0008095	inositol-1,4,5-trisphosphate receptor activity	GO:0005220	inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

Term changes

KEY: 'A' : added, 'D' : deleted, 'C' : changed (for properties with only one value)

Changes in term-related data
Term ID	name	alt_id	def	synonym	is_a	intersection_of	relationship	consider
Term ID	name	alt_id	def	synonym	is_a	intersection_of	relationship	consider
GO:0004984 olfactory receptor activity			C	1 A	1 D, 1 A		1 A
GO:0005044 scavenger receptor activity			C	1 D, 1 A
GO:0005220 inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity		1 A	C	3 A	1 D, 1 A		1 A
GO:0007172 signal complex assembly			C		1 A		1 D
GO:0008527 taste receptor activity							1 A
GO:0015469 channel-forming toxin activity								1 D, 1 A
GO:0031585 regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity	C		C	1 A		1 D, 1 A	1 D, 1 A
GO:0031586 negative regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity	C		C	1 A		1 D, 1 A	1 D, 1 A
GO:0031587 positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity	C		C	1 A		1 D, 1 A	1 D, 1 A
GO:0033038 bitter taste receptor activity							1 A
GO:0033039 salty taste receptor activity							1 A
GO:0033040 sour taste receptor activity							1 A
GO:0033041 sweet taste receptor activity							1 A
GO:0033042 umami taste receptor activity							1 A
GO:0033210 leptin-mediated signaling pathway			C		1 A
GO:0043113 receptor clustering							1 D
GO:0046931 pore complex assembly				1 D
GO:0060501 positive regulation of epithelial cell proliferation involved in lung morphogenesis					1 A

File Stats

Term counts for the old and new files
Ontology	Old file	New file	Change
molecular function	9023 9023 (100.0%) defined	9024 9024 (100.0%) defined	+1
cellular component	2855 2855 (100.0%) defined	2856 2856 (100.0%) defined	+1
biological process	20983 20982 (100.0%) defined	21000 20999 (100.0%) defined	+17
Obsolete	1559 (4.5% of total)	1559 (4.5% of total)	0 (0.0%)
Totals	32861 32860 (100.0%) defined 34420 inc. obsoletes	32880 32879 (100.0%) defined 34439 inc. obsoletes	+19 (+0.1%)