# HISTORY 05 Oct 2016: Saved by mfeuerma using Paint 2.22 # molecular_function 20161005: root_PTN000040498 has function DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906) 20161005: root_PTN000040498 has function DNA N-glycosylase activity (GO:0019104) 20161005: root_PTN000040498 has function oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity (GO:0000703) # cellular_component 20161005: Eukaryota_PTN000040500 is found in nucleus (GO:0005634) 20161005: Eukaryota_PTN000040501 is found in mitochondrion (GO:0005739) 20161005: Embryophyta_PTN000820703 is found in chloroplast nucleoid (GO:0042644) # biological_process 20161005: root_PTN000040498 participates in base-excision repair, AP site formation (GO:0006285) 20161005: root_PTN000040498 participates in nucleotide-excision repair, DNA incision, 5'-to lesion (GO:0006296) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).