# HISTORY 26 Apr 2016: Updated by: TOUCHUP-v1.15 19 Mar 2016: Updated by: TOUCHUP-v1.14 # molecular_function 20151112: root_PTN000842443 has function ubiquitin-protein transferase activity (GO:0004842) # cellular_component 20151112: root_PTN000842443 is found in SCF ubiquitin ligase complex (GO:0019005) # biological_process 20151112: root_PTN000842443 participates in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146) 20151112: Magnoliophyta_PTN002081274 participates in regulation of transcription, DNA-templated (GO:0006355) 20151112: Magnoliophyta_PTN001594206 participates in regulation of auxin mediated signaling pathway (GO:0010928) 20151112: Magnoliophyta_PTN001594206 participates in simple leaf morphogenesis (GO:0060776) 20151112: Magnoliophyta_PTN001594206 participates in leaf vascular tissue pattern formation (GO:0010305) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).