# HISTORY 09 Aug 2016: Saved by mfeuerma using Paint 2.22 # molecular_function 20160809: root_PTN001248937 has function amino acid binding (GO:0016597) 20160809: root_PTN001248937 has function sequence-specific DNA binding (GO:0043565) 20160809: root_PTN001248937 has function transcription factor activity, sequence-specific DNA binding (GO:0003700) # cellular_component 20160809: root_PTN001248937 is found in cytosol (GO:0005829) # biological_process 20160809: root_PTN001248937 participates in response to amino acid (GO:0043200) 20160809: Gammaproteobacteria_PTN000765740 participates in alanine catabolic process (GO:0006524) 20160809: Gammaproteobacteria_PTN000765740 participates in response to leucine (GO:0043201) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).