# HISTORY 28 Oct 2016: Saved by pgaudet using Paint 2.25 # molecular_function 20161028: Viridiplantae_PTN001195356 has function chloroplast targeting sequence binding (GO:0030941) 20161028: Opisthokonta_PTN001195199 has function transcription factor activity, sequence-specific DNA binding (GO:0003700) 20161028: Opisthokonta_PTN001195199 has function transcription regulatory region DNA binding (GO:0044212) # cellular_component 20161028: Viridiplantae_PTN001195356 is found in integral component of chloroplast outer membrane (GO:0031359) 20161028: root_PTN002382503 is found in intracellular (GO:0005622) 20161028: Opisthokonta_PTN001195198 is found in nucleus (GO:0005634) # biological_process 20161028: Viridiplantae_PTN001195356 participates in protein targeting to chloroplast (GO:0045036) 20161028: Dikarya_PTN001950816 participates in ribosomal small subunit export from nucleus (GO:0000056) 20161028: Dikarya_PTN001950816 participates in ribosomal small subunit biogenesis (GO:0042274) 20161028: Opisthokonta_PTN001195199 participates in positive regulation of gene expression (GO:0010628) 20161028: Opisthokonta_PTN001195199 participates in positive regulation of transcription from RNA polymerase II promoter (GO:0045944) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).