# HISTORY 24 Aug 2016: Saved by mfeuerma using Paint 2.22 # molecular_function 20160824: root_PTN001467575 has function 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (GO:0008686) 20160824: Gammaproteobacteria_PTN000481658 has LOST/MODIFIED function 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (GO:0008686) 20160824: Gammaproteobacteria_PTN000481658 has function GTP cyclohydrolase II activity (GO:0003935) 20160824: node_PTN001848544 has LOST/MODIFIED function 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (GO:0008686) 20160824: Fungi_PTN001848452 has LOST/MODIFIED function 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (GO:0008686) 20160824: Fungi_PTN001848452 has function cyclohydrolase activity (GO:0019238) 20160824: rosids_PTN001848503 has function GTP cyclohydrolase II activity (GO:0003935) # cellular_component 20160824: Embryophyta_PTN001084701 is found in chloroplast (GO:0009507) 20160824: Bacteria _PTN001848458 is found in cytosol (GO:0005829) 20160824: Fungi_PTN001084664 is found in mitochondrial intermembrane space (GO:0005758) 20160824: Fungi_PTN001084664 is found in cytosol (GO:0005829) 20160824: Fungi_PTN001848452 is found in cytoplasm (GO:0005737) 20160824: root_PTN001467575 is found in cytoplasm (GO:0005737) # biological_process 20160824: root_PTN001467575 participates in riboflavin biosynthetic process (GO:0009231) 20160824: Fungi_PTN001084664 participates in aerobic respiration (GO:0009060) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).