# HISTORY 26 Mar 2016: Updated by: TOUCHUP-v1.15 16 Mar 2016: Updated by: TOUCHUP-v1.14 # molecular_function 20150918: node_PTN000472585 has function 3-dehydroquinate synthase activity (GO:0003856) 20150918: Saccharomycetales_PTN001078627 has function 3-phosphoshikimate 1-carboxyvinyltransferase activity (GO:0003866) 20150918: Saccharomycetales_PTN001078627 has function 3-dehydroquinate dehydratase activity (GO:0003855) 20150918: Saccharomycetales_PTN001078627 has function shikimate kinase activity (GO:0004765) 20150918: Saccharomycetales_PTN001078627 has function shikimate 3-dehydrogenase (NADP+) activity (GO:0004764) 20150918: node_PTN000472635 has function 3-phosphoshikimate 1-carboxyvinyltransferase activity (GO:0003866) 20150918: Proteobacteria_PTN000472579 has function UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity (GO:0008760) # cellular_component 20150918: root_PTN000472561 is found in cytoplasm (GO:0005737) # biological_process 20150918: node_PTN000472585 participates in chorismate biosynthetic process (GO:0009423) 20150918: Bacteria _PTN000472619 participates in aromatic amino acid family biosynthetic process (GO:0009073) 20150918: node_PTN000472635 participates in chorismate biosynthetic process (GO:0009423) 20150918: Proteobacteria_PTN000472579 participates in peptidoglycan biosynthetic process (GO:0009252) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).