# HISTORY 16 Sep 2016: Saved by mfeuerma using Paint 2.22 # molecular_function 20160916: node_PTN000472519 has function shikimate 3-dehydrogenase (NADP+) activity (GO:0004764) 20160916: node_PTN000472499 has function 3-dehydroquinate dehydratase activity (GO:0003855) 20160916: node_PTN001464796 has function glutamyl-tRNA reductase activity (GO:0008883) 20160916: Bacteria _PTN000472536 has function NADP binding (GO:0050661) 20160916: root_PTN001464795 has function NADP binding (GO:0050661) # cellular_component 20160916: root_PTN001464795 is found in cytosol (GO:0005829) 20160916: Eukaryota_PTN000472521 is NOT found in cytosol (GO:0005829) 20160916: Viridiplantae_PTN000472525 is found in chloroplast stroma (GO:0009570) # biological_process 20160916: node_PTN001464796 participates in protoporphyrinogen IX biosynthetic process from glutamate (GO:0019353) 20160916: node_PTN000472499 participates in 3,4-dihydroxybenzoate biosynthetic process (GO:0046279) 20160916: node_PTN000472519 participates in shikimate metabolic process (GO:0019632) 20160916: Bacteria _PTN000472536 participates in chorismate biosynthetic process (GO:0009423) 20160916: node_PTN000472519 participates in chorismate biosynthetic process (GO:0009423) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).