# HISTORY
07 May 2016: Updated by: TOUCHUP-v1.18
16 Mar 2016: Updated by: TOUCHUP-v1.14
25 Mar 2016: Updated by: TOUCHUP-v1.15

# molecular_function
20151109: root_PTN001021049 has function ubiquitin protein ligase activity (GO:0061630) 

# cellular_component
20151109: Magnoliophyta_PTN001798153 is found in plasma membrane (GO:0005886) 
20151109: rosids_PTN001798369 is found in early endosome (GO:0005769) 
20151109: rosids_PTN001798369 is found in Golgi-associated vesicle (GO:0005798) 
20151109: rosids_PTN001798369 is found in plasma membrane (GO:0005886) 
20151109: Eukaryota_PTN000366017 is found in cytoplasm (GO:0005737) 
20151109: Eukaryota_PTN000366017 is found in nucleoplasm (GO:0005654) 

# biological_process
20151109: root_PTN001021049 participates in proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161) 
20151109: Magnoliophyta_PTN001798153 participates in negative regulation of short-day photoperiodism, flowering (GO:0048577) 
20151109: rosids_PTN001798293 participates in response to chitin (GO:0010200) 
20151109: rosids_PTN001798339 participates in seed dormancy process (GO:0010162) 
20151109: rosids_PTN001798369 participates in cellular response to osmotic stress (GO:0071470) 
20151109: rosids_PTN001798369 participates in regulation of response to salt stress (GO:1901000) 
20151109: rosids_PTN001798369 participates in regulation of endocytosis (GO:0030100) 
20151109: Magnoliophyta_PTN000366093 participates in floral organ development (GO:0048437) 
20151109: Eukaryota_PTN000366017 participates in regulation of transcription, DNA-templated (GO:0006355) 
20151109: Euteleostomi_PTN000366055 participates in regulation of androgen receptor signaling pathway (GO:0060765) 
20151109: Euteleostomi_PTN000366021 participates in random inactivation of X chromosome (GO:0060816) 
20151109: Euteleostomi_PTN000366021 participates in regulation of dosage compensation by inactivation of X chromosome (GO:1900095) 
20151109: Sauria_PTN001423269 does NOT participate in random inactivation of X chromosome (GO:0060816) 
20151109: Sauria_PTN001423269 does NOT participate in regulation of dosage compensation by inactivation of X chromosome (GO:1900095) 
20151109: Teleostei_PTN001020994 does NOT participate in random inactivation of X chromosome (GO:0060816) 
20151109: Teleostei_PTN001020994 does NOT participate in regulation of dosage compensation by inactivation of X chromosome (GO:1900095) 

# WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED

# NOTES

# REFERENCE
Annotation inferences using phylogenetic trees
The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).