# HISTORY 25 Mar 2016: Updated by: TOUCHUP-v1.15 15 Mar 2016: Updated by: TOUCHUP-v1.14 # molecular_function 20160114: Eukaryota_PTN001406397 has function ubiquitin-protein transferase activity (GO:0004842) # cellular_component 20160114: Eukaryota_PTN001406397 is found in SCF ubiquitin ligase complex (GO:0019005) 20160114: Eukaryota_PTN001406397 is found in nucleus (GO:0005634) # biological_process 20160114: Eukaryota_PTN001406397 participates in ubiquitin-dependent protein catabolic process (GO:0006511) 20160114: Eukaryota_PTN001406397 participates in protein ubiquitination (GO:0016567) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).