# HISTORY 07 May 2016: Updated by: TOUCHUP-v1.18 14 Mar 2016: Updated by: TOUCHUP-v1.14 24 Mar 2016: Updated by: TOUCHUP-v1.15 # molecular_function 20140829: node_PTN000133341 has function dUTP diphosphatase activity (GO:0004170) 20140829: node_PTN000133341 has function magnesium ion binding (GO:0000287) 20140829: Bacteria _PTN001343177 has function dCTP deaminase activity (GO:0008829) # cellular_component 20141207: root_PTN000133428 is found in cytoplasm (GO:0005737) # biological_process 20140829: root_PTN000133428 participates in nucleobase-containing compound metabolic process (GO:0006139) 20140829: node_PTN000133341 participates in dUMP biosynthetic process (GO:0006226) 20140829: node_PTN000133341 participates in dUTP catabolic process (GO:0046081) 20140829: Bacteria _PTN001343177 participates in nucleobase-containing small molecule interconversion (GO:0015949) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES MAF: I cannot conclude which of the activities (dut or dcd) the upper branch really has. PG 2012-12-07 Reviewed to remove taxon violations. # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).