# HISTORY 24 Mar 2016: Updated by: TOUCHUP-v1.15 14 Mar 2016: Updated by: TOUCHUP-v1.14 # molecular_function 20150619: root_PTN000097533 has function flavin adenine dinucleotide binding (GO:0050660) 20150619: root_PTN000097533 has function acyl-CoA dehydrogenase activity (GO:0003995) 20150619: root_PTN000097533 has function electron carrier activity (GO:0009055) 20150619: root_PTN000097533 has function fatty-acyl-CoA binding (GO:0000062) 20150619: root_PTN000097533 has function oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor (GO:0052890) 20150619: Metazoa_PTN001656479 has function very-long-chain-acyl-CoA dehydrogenase activity (GO:0017099) 20150619: Opisthokonta_PTN000856953 has function palmitoyl-CoA oxidase activity (GO:0016401) 20150619: Opisthokonta_PTN000856953 has function long-chain-acyl-CoA dehydrogenase activity (GO:0004466) 20150619: Eukaryota_PTN001656675 has function palmitoyl-CoA oxidase activity (GO:0016401) 20150619: Metazoa_PTN001656684 has function pristanoyl-CoA oxidase activity (GO:0016402) 20150619: Eukaryota_PTN000098033 has function medium-chain-acyl-CoA dehydrogenase activity (GO:0070991) 20150619: Eukaryota_PTN000098091 has function isovaleryl-CoA dehydrogenase activity (GO:0008470) 20150619: Eukaryota_PTN000097838 has function butyryl-CoA dehydrogenase activity (GO:0004085) # cellular_component 20150619: cellular organisms_PTN000856793 is found in mitochondrion (GO:0005739) 20150619: Opisthokonta_PTN001330900 is found in mitochondrion (GO:0005739) 20150619: Bilateria_PTN000097537 is found in mitochondrion (GO:0005739) 20150619: Bacteria _PTN001656525 is found in plasma membrane (GO:0005886) 20150619: Opisthokonta_PTN000856953 is found in mitochondrion (GO:0005739) 20150619: Opisthokonta_PTN000856662 is found in mitochondrion (GO:0005739) 20150619: Eukaryota_PTN000098222 is found in peroxisome (GO:0005777) 20150619: Eukaryota_PTN000098492 is found in mitochondrion (GO:0005739) 20150619: cellular organisms_PTN000856315 is found in peroxisome (GO:0005777) 20150619: Eukaryota_PTN000098033 is found in mitochondrion (GO:0005739) 20150619: node_PTN001656750 is found in plasma membrane (GO:0005886) 20150619: node_PTN000856963 is found in plasma membrane (GO:0005886) 20150619: node_PTN001656759 is found in plasma membrane (GO:0005886) 20150619: node_PTN001330929 is found in mitochondrion (GO:0005739) 20150619: Archaea_PTN001330881 is NOT found in mitochondrion (GO:0005739) 20150619: Eukaryota_PTN000098033 is NOT found in peroxisome (GO:0005777) 20150619: Proteobacteria_PTN000098029 is NOT found in mitochondrion (GO:0005739) 20150619: Archaea_PTN000856832 is NOT found in mitochondrion (GO:0005739) 20150619: Gammaproteobacteria_PTN001656807 is NOT found in mitochondrion (GO:0005739) # biological_process 20150619: root_PTN000097533 participates in fatty acid beta-oxidation using acyl-CoA dehydrogenase (GO:0033539) 20150619: root_PTN000097533 participates in lipid homeostasis (GO:0055088) 20150619: Metazoa_PTN001656479 participates in very long-chain fatty acid catabolic process (GO:0042760) 20150619: Opisthokonta_PTN000856953 participates in long-chain fatty acid catabolic process (GO:0042758) 20150619: Opisthokonta_PTN000856953 participates in carnitine metabolic process, CoA-linked (GO:0019254) 20150619: Eukaryota_PTN000097838 participates in butyrate catabolic process (GO:0046359) # WARNINGS - THE FOLLOWING HAVE BEEN REMOVED FOR THE REASONS NOTED # NOTES # REFERENCE Annotation inferences using phylogenetic trees The goal of the GO Reference Genome Project, described in PMID 19578431, is to provide accurate, complete and consistent GO annotations for all genes in twelve model organism genomes. To this end, GO curators are annotating evolutionary trees from the PANTHER database with GO terms describing molecular function, biological process and cellular component. GO terms based on experimental data from the scientific literature are used to annotate ancestral genes in the phylogenetic tree by sequence similarity (ISS), and unannotated descendants of these ancestral genes are inferred to have inherited these same GO annotations by descent. The annotations are done using a tool called PAINT (Phylogenetic Annotation and INference Tool).