21 BWA alignments of bone marrow RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site bone marrow RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "bone marrow"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 113 Spliced-read support for bone marrow bone marrow intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "bone marrow"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 105 Annotation generated from bone marrow RNA-seq data bone marrow RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "bone marrow"}, "type": "rnaseq", "zmenu": "RNASeq"} 59 Spliced-read support for bone marrow bone marrow intron-spanning reads 1 \N 36 BWA alignments of brain cerebellum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain cerebellum RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain cerebellum"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 84 Spliced-read support for brain cerebellum brain cerebellum intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain cerebellum"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 79 Annotation generated from brain cerebellum RNA-seq data brain cerebellum RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain cerebellum"}, "type": "rnaseq", "zmenu": "RNASeq"} 99 Spliced-read support for brain cerebellum brain cerebellum intron-spanning reads 1 \N 27 BWA alignments of brain frontal cortex RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain frontal cortex RNA-seq BWA alignments 1 {"matrix": {"row": "brain frontal cortex", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 66 Spliced-read support for brain frontal cortex brain frontal cortex intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "brain frontal cortex", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 63 Annotation generated from brain frontal cortex RNA-seq data brain frontal cortex RNA-seq gene models 1 {"matrix": {"row": "brain frontal cortex", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 81 Spliced-read support for brain frontal cortex brain frontal cortex intron-spanning reads 1 \N 28 BWA alignments of brain pituitary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain pituitary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain pituitary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 103 Spliced-read support for brain pituitary brain pituitary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain pituitary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 82 Annotation generated from brain pituitary RNA-seq data brain pituitary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain pituitary"}, "type": "rnaseq", "zmenu": "RNASeq"} 87 Spliced-read support for brain pituitary brain pituitary intron-spanning reads 1 \N 38 BWA alignments of brain prefrontal cortex RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain prefrontal cortex RNA-seq BWA alignments 1 {"matrix": {"row": "brain prefrontal cortex", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 110 Spliced-read support for brain prefrontal cortex brain prefrontal cortex intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "brain prefrontal cortex", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 128 Annotation generated from brain prefrontal cortex RNA-seq data brain prefrontal cortex RNA-seq gene models 1 {"matrix": {"row": "brain prefrontal cortex", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 108 Spliced-read support for brain prefrontal cortex brain prefrontal cortex intron-spanning reads 1 \N 19 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"matrix": {"row": "brain", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 44 Spliced-read support for brain brain intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "brain", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 47 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"matrix": {"row": "brain", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 107 Spliced-read support for brain brain intron-spanning reads 1 \N 32 BWA alignments of brain temporal lobe RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain temporal lobe RNA-seq BWA alignments 1 {"matrix": {"row": "brain temporal lobe", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 58 Spliced-read support for brain temporal lobe brain temporal lobe intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "brain temporal lobe", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 67 Annotation generated from brain temporal lobe RNA-seq data brain temporal lobe RNA-seq gene models 1 {"matrix": {"row": "brain temporal lobe", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 55 Spliced-read support for brain temporal lobe brain temporal lobe intron-spanning reads 1 \N 25 BWA alignments of colon RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site colon RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "colon"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 64 Spliced-read support for colon colon intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "colon"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 62 Annotation generated from colon RNA-seq data colon RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "colon"}, "type": "rnaseq", "zmenu": "RNASeq"} 100 Spliced-read support for colon colon intron-spanning reads 1 \N 14 BWA alignments of cumulus cells RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site cumulus cells RNA-seq BWA alignments 1 {"matrix": {"row": "cumulus cells", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 51 Spliced-read support for cumulus cells cumulus cells intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "cumulus cells", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 70 Annotation generated from cumulus cells RNA-seq data cumulus cells RNA-seq gene models 1 {"matrix": {"row": "cumulus cells", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 93 Spliced-read support for cumulus cells cumulus cells intron-spanning reads 1 \N 24 BWA alignments of dorsal raphe nucleus RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site dorsal raphe nucleus RNA-seq BWA alignments 1 {"matrix": {"row": "dorsal raphe nucleus", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 95 Spliced-read support for dorsal raphe nucleus dorsal raphe nucleus intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "dorsal raphe nucleus", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 112 Annotation generated from dorsal raphe nucleus RNA-seq data dorsal raphe nucleus RNA-seq gene models 1 {"matrix": {"row": "dorsal raphe nucleus", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 94 Spliced-read support for dorsal raphe nucleus dorsal raphe nucleus intron-spanning reads 1 \N 17 BWA alignments of embryonic stem cell RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site embryonic stem cell RNA-seq BWA alignments 1 {"matrix": {"row": "embryonic stem cell", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 78 Spliced-read support for embryonic stem cell embryonic stem cell intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "embryonic stem cell", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 43 Annotation generated from embryonic stem cell RNA-seq data embryonic stem cell RNA-seq gene models 1 {"matrix": {"row": "embryonic stem cell", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 52 Spliced-read support for embryonic stem cell embryonic stem cell intron-spanning reads 1 \N 31 BWA alignments of heart RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site heart RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "heart"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 85 Spliced-read support for heart heart intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "heart"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 96 Annotation generated from heart RNA-seq data heart RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "heart"}, "type": "rnaseq", "zmenu": "RNASeq"} 119 Spliced-read support for heart heart intron-spanning reads 1 \N 13 BWA alignments of ileum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ileum RNA-seq BWA alignments 1 {"matrix": {"row": "ileum", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 40 Spliced-read support for ileum ileum intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "ileum", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 41 Annotation generated from ileum RNA-seq data ileum RNA-seq gene models 1 {"matrix": {"row": "ileum", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 109 Spliced-read support for ileum ileum intron-spanning reads 1 \N 37 BWA alignments of kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site kidney RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "kidney"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 127 Spliced-read support for kidney kidney intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "kidney"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 122 Annotation generated from kidney RNA-seq data kidney RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "kidney"}, "type": "rnaseq", "zmenu": "RNASeq"} 114 Spliced-read support for kidney kidney intron-spanning reads 1 \N 26 BWA alignments of liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 53 Spliced-read support for liver liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 50 Annotation generated from liver RNA-seq data liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 54 Spliced-read support for liver liver intron-spanning reads 1 \N 34 BWA alignments of lung RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site lung RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "lung"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 61 Spliced-read support for lung lung intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "lung"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 77 Annotation generated from lung RNA-seq data lung RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "lung"}, "type": "rnaseq", "zmenu": "RNASeq"} 83 Spliced-read support for lung lung intron-spanning reads 1 \N 30 BWA alignments of lymph node RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site lymph node RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "lymph node"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 115 Spliced-read support for lymph node lymph node intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "lymph node"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 101 Annotation generated from lymph node RNA-seq data lymph node RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "lymph node"}, "type": "rnaseq", "zmenu": "RNASeq"} 98 Spliced-read support for lymph node lymph node intron-spanning reads 1 \N 129 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 131 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 130 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 132 Spliced-read support for merged merged intron-spanning reads 1 \N 9 BWA alignments of newborn brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn brain RNA-seq BWA alignments 1 {"matrix": {"row": "newborn brain", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 39 Spliced-read support for newborn brain newborn brain intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn brain", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 42 Annotation generated from newborn brain RNA-seq data newborn brain RNA-seq gene models 1 {"matrix": {"row": "newborn brain", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 69 Spliced-read support for newborn brain newborn brain intron-spanning reads 1 \N 10 BWA alignments of newborn heart RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn heart RNA-seq BWA alignments 1 {"matrix": {"row": "newborn heart", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 75 Spliced-read support for newborn heart newborn heart intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn heart", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 80 Annotation generated from newborn heart RNA-seq data newborn heart RNA-seq gene models 1 {"matrix": {"row": "newborn heart", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 48 Spliced-read support for newborn heart newborn heart intron-spanning reads 1 \N 23 BWA alignments of newborn kidney RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn kidney RNA-seq BWA alignments 1 {"matrix": {"row": "newborn kidney", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 76 Spliced-read support for newborn kidney newborn kidney intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn kidney", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 45 Annotation generated from newborn kidney RNA-seq data newborn kidney RNA-seq gene models 1 {"matrix": {"row": "newborn kidney", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 71 Spliced-read support for newborn kidney newborn kidney intron-spanning reads 1 \N 16 BWA alignments of newborn liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn liver RNA-seq BWA alignments 1 {"matrix": {"row": "newborn liver", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 111 Spliced-read support for newborn liver newborn liver intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn liver", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 73 Annotation generated from newborn liver RNA-seq data newborn liver RNA-seq gene models 1 {"matrix": {"row": "newborn liver", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 74 Spliced-read support for newborn liver newborn liver intron-spanning reads 1 \N 22 BWA alignments of newborn lung RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn lung RNA-seq BWA alignments 1 {"matrix": {"row": "newborn lung", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 57 Spliced-read support for newborn lung newborn lung intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn lung", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 72 Annotation generated from newborn lung RNA-seq data newborn lung RNA-seq gene models 1 {"matrix": {"row": "newborn lung", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 60 Spliced-read support for newborn lung newborn lung intron-spanning reads 1 \N 12 BWA alignments of newborn muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn muscle RNA-seq BWA alignments 1 {"matrix": {"row": "newborn muscle", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 68 Spliced-read support for newborn muscle newborn muscle intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn muscle", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 46 Annotation generated from newborn muscle RNA-seq data newborn muscle RNA-seq gene models 1 {"matrix": {"row": "newborn muscle", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 56 Spliced-read support for newborn muscle newborn muscle intron-spanning reads 1 \N 18 BWA alignments of newborn thymus RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site newborn thymus RNA-seq BWA alignments 1 {"matrix": {"row": "newborn thymus", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 123 Spliced-read support for newborn thymus newborn thymus intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "newborn thymus", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 88 Annotation generated from newborn thymus RNA-seq data newborn thymus RNA-seq gene models 1 {"matrix": {"row": "newborn thymus", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 89 Spliced-read support for newborn thymus newborn thymus intron-spanning reads 1 \N 20 BWA alignments of retina RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site retina RNA-seq BWA alignments 1 {"matrix": {"row": "retina", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 92 Spliced-read support for retina retina intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "retina", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 125 Annotation generated from retina RNA-seq data retina RNA-seq gene models 1 {"matrix": {"row": "retina", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 126 Spliced-read support for retina retina intron-spanning reads 1 \N 29 BWA alignments of skeletal muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skeletal muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "skeletal muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 90 Spliced-read support for skeletal muscle skeletal muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "skeletal muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 120 Annotation generated from skeletal muscle RNA-seq data skeletal muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "skeletal muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 121 Spliced-read support for skeletal muscle skeletal muscle intron-spanning reads 1 \N 35 BWA alignments of spleen RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site spleen RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "spleen"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 124 Spliced-read support for spleen spleen intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "spleen"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 91 Annotation generated from spleen RNA-seq data spleen RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "spleen"}, "type": "rnaseq", "zmenu": "RNASeq"} 106 Spliced-read support for spleen spleen intron-spanning reads 1 \N 15 BWA alignments of testes RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testes RNA-seq BWA alignments 1 {"matrix": {"row": "testes", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 49 Spliced-read support for testes testes intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "testes", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 104 Annotation generated from testes RNA-seq data testes RNA-seq gene models 1 {"matrix": {"row": "testes", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 97 Spliced-read support for testes testes intron-spanning reads 1 \N 33 BWA alignments of thymus RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site thymus RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "thymus"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 65 Spliced-read support for thymus thymus intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "thymus"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 102 Annotation generated from thymus RNA-seq data thymus RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "thymus"}, "type": "rnaseq", "zmenu": "RNASeq"} 116 Spliced-read support for thymus thymus intron-spanning reads 1 \N 11 BWA alignments of white adipose RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site white adipose RNA-seq BWA alignments 1 {"matrix": {"row": "white adipose", "column": "BAM files", "group_order": "1", "menu": "rnaseq", "group": "ENA"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq_bam", "type": "rnaseq", "colour_key": "bam"} 118 Spliced-read support for white adipose white adipose intron-spanning reads 1 {"label_key": "", "zmenu": "Supporting_alignment", "additional_renderers": ["histogram", "Variable height"], "matrix": {"row": "white adipose", "column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq"}, "type": "rnaseq", "colour_key": "intron_support"} 117 Annotation generated from white adipose RNA-seq data white adipose RNA-seq gene models 1 {"matrix": {"row": "white adipose", "column": "Gene models", "group": "ENA", "menu": "rnaseq"}, "label_key": "RNASeq [biotype]", "zmenu": "RNASeq", "type": "rnaseq", "colour_key": "human_rnaseq"} 86 Spliced-read support for white adipose white adipose intron-spanning reads 1 \N 134 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}