1717	1	xref.timestamp	2012-06-20 23:23:29
1	\N	schema_version	115
2	\N	patch	patch_52_53_a.sql|schema_version
3	\N	patch	patch_52_53_b.sql|external_db_type_enum
4	\N	patch	patch_52_53_c.sql|identity_xref_rename
5	\N	patch	patch_52_53_d.sql|drop_go_xref_index
1697	1	species.classification	Tetrapoda
1698	1	species.classification	Sarcopterygii
40	1	assembly.default	GRCh37
41	1	assembly.date	2009-02
42	1	assembly.name	GRCh37.p8
43	1	genebuild.id	25
44	1	genebuild.start_date	2010-07-Ensembl
45	1	genebuild.initial_release_date	2011-04
46	1	genebuild.last_geneset_update	2012-07
48	1	assembly.mapping	chromosome:GRCh37#contig
49	1	assembly.long_name	Genome Reference Consortium Human Reference 37
50	1	assembly.accession	GCA_000001405.9
51	1	assembly.mapping	supercontig:GRCh37#contig
68	1	marker.priority	80
69	1	assembly.mapping	clone#contig
62	1	genebuild.method	full_genebuild
81	1	assembly.mapping	chromosome:GRCh37|supercontig:GRCh37
119	1	assembly.mapping	chromosome:GRCh37#contig#clone
365	1	assembly.mapping	chromosome:GRCh37#chromosome:NCBI36
366	1	assembly.mapping	chromosome:GRCh37#chromosome:NCBI35
367	1	assembly.mapping	chromosome:GRCh37#chromosome:NCBI34
368	1	assembly.mapping	supercontig:GRCh37#contig#clone
381	\N	patch	patch_53_54_a.sql|schema_version
382	\N	patch	patch_53_54_b.sql|widen_columns
383	\N	patch	patch_53_54_c.sql|identity_object_analysis_move
384	\N	patch	patch_54_55_a.sql|schema_version
385	\N	patch	patch_54_55_b.sql|add_go_xrefs_types
386	\N	patch	patch_54_55_c.sql|add_splicing_event_tables
387	\N	patch	patch_54_55_d.sql|add_dependent_xref_table
388	\N	patch	patch_54_55_e.sql|add_is_constitutive_column
392	\N	patch	patch_54_55_f.sql|coord_system.version_null
393	\N	patch	patch_54_55_h.sql|gene_archive.allow_for_NULLs
394	\N	patch	patch_54_55_g.sql|analysis_description.display_label_NOT_NULL
1715	1	assembly.overlapping_regions	1
1702	1	species.classification	Vertebrata
462	1	assembly.coverage_depth	high
463	1	repeat.analysis	dust
464	1	repeat.analysis	repeatmask
465	1	repeat.analysis	trf
1680	1	species.stable_id_prefix	ENS
467	1	liftover.mapping	chromosome:GRCh37#chromosome:NCBI36
468	1	liftover.mapping	chromosome:GRCh37#chromosome:NCBI35
469	1	liftover.mapping	chromosome:GRCh37#chromosome:NCBI34
513	\N	patch	patch_55_56_a.sql|schema_version
514	\N	patch	patch_55_56_b.sql|add_index_names
515	\N	patch	patch_55_56_c.sql|drop_oligo_tables_and_xrefs
516	\N	patch	patch_55_56_d.sql|add_index_to_splicing_event_feature
1142	1	genebuild.level	toplevel
1671	1	species.alias	9606
1143	1	transcriptbuild.level	toplevel
1675	1	species.alias	homo sapiens
1144	1	exonbuild.level	toplevel
1145	1	repeat_featurebuild.level	toplevel
1146	1	dna_align_featurebuild.level	toplevel
1147	1	protein_align_featurebuild.level	toplevel
1148	1	simple_featurebuild.level	toplevel
1149	1	prediction_transcriptbuild.level	toplevel
1150	1	prediction_exonbuild.level	toplevel
1677	1	species.alias	homo
1673	1	species.alias	homsap
1670	1	species.alias	human
1672	1	species.alias	hsap
650	\N	patch	patch_56_57_a.sql|schema_version
653	\N	patch	patch_56_57_b.sql|unmapped_object.typ_enum_tidy
654	\N	patch	patch_56_57_c.sql|external_db_type_enum
1704	1	species.classification	Chordata
1699	1	species.classification	Euteleostomi
696	\N	patch	patch_56_57_d.sql|allow_meta_null
697	\N	patch	patch_56_57_e.sql|canonical_translations
698	\N	patch	patch_56_57_f.sql|simple_feature.display_label
1703	1	species.classification	Craniata
1692	1	species.classification	Euarchontoglires
744	\N	patch	patch_57_58_a.sql|schema_version
1713	1	species.production_name	homo_sapiens
810	1	assembly.mapping	lrg#contig#chromosome:GRCh37
809	1	assembly.mapping	lrg#contig
808	1	lrg	lrg
1695	1	species.classification	Mammalia
800	\N	patch	patch_58_59_a.sql|schema_version
801	\N	patch	patch_58_59_b.sql|assembly_exception_exc_type_enum
802	\N	patch	patch_58_59_c.sql|splicing_event_attrib_type_id
803	\N	patch	patch_58_59_d.sql|object_xref_extend_index
804	\N	schema_type	core
805	\N	patch	patch_58_59_e.sql|meta_schema_type
1712	1	species.scientific_name	Homo sapiens
972	\N	patch	patch_59_60_a.sql|schema_version
973	\N	patch	patch_59_60_b.sql|rename_go_xref_table
974	\N	patch	patch_59_60_c.sql|QC_fixes
975	\N	patch	patch_60_61_a.sql|schema_version
976	\N	patch	patch_60_61_b.sql|create_seq_region_synonym_table
977	\N	patch	patch_60_61_c.sql|rejig_object_xref_indexes
1008	\N	patch	patch_61_62_a.sql|schema_version
1009	\N	patch	patch_61_62_b.sql|synonym_field_extension
1010	\N	patch	patch_61_62_c.sql|db_name_db_release_idx
1011	\N	patch	patch_61_62_d.sql|remove_display_label_linkable
1018	1	genebuild.havana_datafreeze_date	2012-03-19
1024	1	removed_evidence_flag.uniprot_dbversion	uniprot_2012_06
1025	1	removed_evidence_flag.ensembl_dbversion	homo_sapiens_core_68_37
1026	\N	patch	patch_61_62_e.sql|seq_region_synonym_seq_region_idx
1039	\N	patch	patch_63_64_a.sql|schema_version
1040	\N	patch	patch_62_63_a.sql|schema_version
1041	\N	patch	patch_62_63_b.sql|indexing_changes
1042	\N	patch	patch_62_63_c.sql|remove_dbprimary_acc_linkable
1043	\N	patch	patch_63_64_b.sql|add_operons
1044	\N	patch	patch_63_64_c.sql|is_ref_added_to_alt_allele
1048	\N	patch	patch_63_64_d.sql|linkage_type change in ontology_xref
1060	\N	patch	patch_64_65_a.sql|schema_version
1061	\N	patch	patch_64_65_b.sql|merge_stable_id_with_object
1062	\N	patch	patch_64_65_c.sql|add_data_file
1063	\N	patch	patch_64_65_d.sql|add_checksum_info_type
1082	\N	patch	patch_65_66_a.sql|schema_version
1083	\N	patch	patch_65_66_b.sql|fix_external_db_id
1084	\N	patch	patch_65_66_c.sql|reorder_unmapped_obj_index
1085	\N	patch	patch_65_66_d.sql|add_index_to_ontology_xref_table
1087	\N	patch	patch_65_66_e.sql|fix_external_db_id_in_xref
1088	\N	patch	patch_65_66_f.sql|drop_default_values
1681	1	species.taxonomy_id	9606
1682	1	species.common_name	human
1688	1	species.classification	Catarrhini
1689	1	species.classification	Simiiformes
1690	1	species.classification	Haplorrhini
1691	1	species.classification	Primates
1184	\N	patch	patch_66_67_a.sql|schema_version
1185	\N	patch	patch_66_67_b.sql|drop_stable_id_views
1186	\N	patch	patch_66_67_c.sql|adding_intron_supporting_evidence
1187	\N	patch	patch_66_67_d.sql|adding_gene_transcript_annotated
1188	\N	patch	patch_66_67_e.sql|index_canonical_transcript_id
1684	1	species.classification	Homo sapiens
1685	1	species.classification	Homininae
1686	1	species.classification	Hominidae
1687	1	species.classification	Hominoidea
1562	1	assembly.web_accession_source	NCBI
1563	1	assembly.web_accession_type	GenBank Assembly ID
1676	1	species.alias	homo_sapiens
1674	1	species.alias	hsapiens
1683	1	species.display_name	Human
1700	1	species.classification	Teleostomi
1701	1	species.classification	Gnathostomata
1696	1	species.classification	Amniota
1714	1	species.url	Homo_sapiens
1693	1	species.classification	Eutheria
1694	1	species.classification	Theria
1718	\N	patch	patch_67_68_e.sql|fix_67_68_e_xref_index
1666	\N	patch	patch_67_68_a.sql|schema_version
1667	\N	patch	patch_67_68_b.sql|xref_uniqueness
1668	\N	patch	patch_67_68_c.sql|altering_intron_supporting_evidence
1669	\N	patch	patch_67_68_d.sql|add_is_splice_canonical_and_seq_index
1678	1	species.alias	enshs
1679	1	species.alias	h_sapiens
1705	1	species.classification	Deuterostomia
1706	1	species.classification	Coelomata
1707	1	species.classification	Bilateria
1708	1	species.classification	Eumetazoa
1709	1	species.classification	Metazoa
1710	1	species.classification	Opisthokonta
1711	1	species.classification	Eukaryota
1719	\N	patch	patch_68_69_a.sql|schema_version
1720	\N	patch	patch_69_70_a.sql|schema_version
1721	\N	patch	patch_69_70_b.sql|add_mapping_set_history
1722	\N	patch	patch_69_70_c.sql|column_datatype_consistency
1723	\N	patch	patch_69_70_d.sql|data_file_id_auto_increment
1724	\N	patch	patch_69_70_e.sql|protein_feature_hit_description
1725	\N	patch	patch_70_71_a.sql|schema_version
1726	\N	patch	patch_70_71_b.sql|mapping_set_index
1727	\N	patch	patch_71_72_a.sql|schema_version
1728	\N	patch	patch_71_72_b.sql|associated_xref
1729	\N	patch	patch_72_73_a.sql|schema_version
1730	\N	patch	patch_72_73_b.sql|alt_allele_type
1731	\N	patch	patch_72_73_c.sql|add_object_type_marker
1732	\N	patch	patch_73_74_a.sql|schema_version
1733	\N	patch	patch_73_74_b.sql|remove_dnac
1734	\N	patch	patch_73_74_c.sql|remove_unconventional_transcript_association
1735	\N	patch	patch_73_74_d.sql|remove_qtl
1736	\N	patch	patch_73_74_e.sql|remove_canonical_annotation
1737	\N	patch	patch_73_74_f.sql|remove_pair_dna_align
1738	\N	patch	patch_73_74_g.sql|add_transcript_idx_tise
1739	\N	patch	patch_73_74_h.sql|alt_allele_unique_gene_idx
1740	\N	patch	patch_74_75_a.sql|schema_version
1741	\N	patch	patch_74_75_b.sql|transcript_source
1742	\N	patch	patch_74_75_c.sql|add_genome_statistics
1743	\N	patch	patch_74_75_d.sql|default_transcript_source
1744	\N	patch	patch_74_75_e.sql|unique_attrib_key
1745	\N	patch	patch_74_75_f.sql|longer_code
1746	\N	patch	patch_75_76_a.sql|schema_version
1747	\N	patch	patch_75_76_b.sql|allow_null_karyotype
1748	\N	patch	patch_75_76_c.sql|remove_alternative_splicing
1749	\N	patch	patch_76_77_a.sql|schema_version
1750	\N	patch	patch_77_78_a.sql|schema_version
1751	\N	patch	patch_77_78_b.sql|source_column_increase
1752	\N	patch	patch_77_78_c.sql|Change unmapped_reason_id from smallint to int
1753	\N	patch	patch_78_79_a.sql|schema_version
1754	\N	patch	patch_79_80_a.sql|schema_version
1755	\N	patch	patch_79_80_b.sql|xref_dbprimary_acc_longer
1756	\N	patch	patch_79_80_c.sql|seq_region_synonym_longer
1757	\N	patch	patch_79_80_d.sql|genome_statistics_value_longer
1758	\N	patch	patch_80_81_a.sql|schema_version
1759	\N	patch	patch_81_82_a.sql|schema_version
1760	\N	patch	patch_81_82_b.sql|xref_width
1761	\N	patch	patch_81_82_c.sql|seq_synonym_key
1762	\N	patch	patch_82_83_a.sql|schema_version
1763	\N	patch	patch_83_84_a.sql|schema_version
1764	\N	patch	patch_83_84_b.sql|xref.version_default
1765	\N	patch	patch_83_84_c.sql|protein_feature_unique
1766	\N	patch	patch_83_84_d.sql|longer_synonym
1767	\N	patch	patch_83_84_e.sql|nullable_versions
1768	\N	patch	patch_84_85_a.sql|schema_version
1769	\N	patch	patch_84_85_b.sql|remove_duplicated_key
1770	\N	patch	patch_85_86_a.sql|schema_version
1771	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
1772	\N	patch	patch_85_86_c.sql|meta_case_insensitive
1773	\N	patch	patch_86_87_a.sql|schema_version
1774	\N	patch	patch_86_87_b.sql|meta_value_NOT_NULL
1775	\N	patch	patch_86_87_c.sql|datetime_default_NULL
1776	\N	patch	patch_87_88_a.sql|schema_version
1777	\N	patch	patch_87_88_b.sql|seq_region_name_255
1778	\N	patch	patch_87_88_c.sql|protein_featue_uniqueness
1779	\N	patch	patch_88_89_a.sql|schema_version
1780	\N	patch	patch_89_90_a.sql|schema_version
1781	\N	patch	patch_89_90_b.sql|remove_status
1782	\N	patch	patch_89_90_c.sql|pf_hit_name_case_sensitive
1783	\N	patch	patch_90_91_a.sql|schema_version
1784	\N	patch	patch_90_91_b.sql|align_type
1785	\N	patch	patch_90_91_c.sql|protein_align_type
1786	\N	patch	patch_90_91_d.sql|remove_external_data
1787	\N	patch	patch_91_92_a.sql|schema_version
1788	\N	patch	patch_91_92_b.sql|add_cigar_line_align_type
1789	\N	patch	patch_92_93_a.sql|schema_version
1790	\N	patch	patch_92_93_b.sql|biotype_table
1791	\N	patch	patch_92_93_c.sql|collate_index_interpro
1792	\N	patch	patch_93_94_a.sql|schema_version
1793	\N	patch	patch_93_94_b.sql|nullable_ox_analysis
1794	\N	patch	patch_93_94_c.sql|default_aln_type
1795	\N	patch	patch_94_95_a.sql|schema_version
1796	\N	patch	patch_95_96_a.sql|schema_version
1797	\N	patch	patch_96_97_a.sql|schema_version
1798	\N	patch	patch_96_97_b.sql|biotype_so_term
1799	\N	patch	patch_96_97_c.sql|rnaproduct_tables
1800	\N	patch	patch_96_97_d.sql|add_object_type_rnaproduct
1801	\N	patch	patch_96_97_e.sql|add_stable_id_event_type_rnaproduct
1802	\N	patch	patch_97_98_a.sql|schema_version
1803	\N	patch	patch_98_99_a.sql|schema_version
1804	\N	patch	patch_99_100_a.sql|schema_version
1805	\N	patch	patch_99_100_b.sql|alter_externaldb_type_notnull
1806	\N	patch	patch_99_100_c.sql|alter_mapping_session_assembly_length
1807	\N	patch	patch_100_101_a.sql|schema_version
1808	\N	patch	patch_101_102_a.sql|schema_version
1809	\N	patch	patch_102_103_a.sql|schema_version
1810	\N	patch	patch_78_79_b.sql|bamcov support
1811	\N	patch	patch_103_104_a.sql|schema_version
1812	\N	patch	patch_104_105_a.sql|schema_version
1813	\N	patch	patch_105_106_a.sql|schema_version
1814	\N	patch	patch_106_107_a.sql|schema_version
1815	\N	patch	patch_106_107_b.sql|Added index for seq_region_mapping
1816	\N	patch	patch_107_108_a.sql|schema_version
1817	\N	patch	patch_108_109_a.sql|schema_version
1818	\N	patch	patch_108_109_b.sql|Added xref source GeneCards into external_db
1819	\N	patch	patch_109_110_a.sql|schema_version
1820	\N	patch	patch_109_110_b.sql|Add IS_PAR relationship to link X- and Y-PAR genes
1821	\N	patch	patch_109_110_c.sql|Allow gene id to belong to multiple alt allele groups
1822	\N	patch	patch_110_111_a.sql|schema_version
1823	\N	patch	patch_111_112_a.sql|schema_version
1824	\N	patch	patch_111_112_b.sql|Allow meta_value to be null
1825	\N	patch	patch_111_112_c.sql|Extend meta_key length to 64
1826	\N	patch	patch_112_113_a.sql|schema_version
1827	\N	patch	patch_112_113_b.sql|Ensure meta_value is not null
1828	\N	patch	patch_113_114_a.sql|schema_version
1829	\N	patch	patch_114_115_a.sql|schema_version
