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<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>E3SW29</accession>
    <name>E3SW29_9VIRU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <organism evidence="2 3">
        <name type="scientific">Pineapple bacilliform CO virus</name>
        <dbReference type="NCBI Taxonomy" id="2033633"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Pararnavirae</taxon>
            <taxon>Artverviricota</taxon>
            <taxon>Revtraviricetes</taxon>
            <taxon>Ortervirales</taxon>
            <taxon>Caulimoviridae</taxon>
            <taxon>Badnavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2009-10" db="EMBL/GenBank/DDBJ databases">
            <title>Sequencing and analysis of the complete genome sequence of Pineapple bacilliform comosus virus.</title>
            <authorList>
                <person name="Wu L.T."/>
                <person name="Li H.P."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
    </reference>
    <dbReference type="EMBL" id="GU121676">
        <property type="protein sequence ID" value="ADN88180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="E3SW29"/>
    <dbReference type="Proteomes" id="UP000202696">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010746">
        <property type="entry name" value="CYMV_Orf1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07028">
        <property type="entry name" value="DUF1319"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="70"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADN88180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000202696"/>
        </source>
    </evidence>
    <sequence length="175" mass="20443" checksum="5D47495800C9AF38" modified="2011-01-11" version="1">MSQRYWEQKLEEYRNSHTQEVADLAYLNLEGAEKVTHKDLAHNLRINTYRQDLANKILVGLSHKHAADIIREIHEDNRKLQNNLKACEKALKEQQAELTAVKSSVPALREELRKIQQSWSEHRPLSKDDVEKLVLRISEQPKFIEQQTESLIKELTSKVSRVEHLIHQLEGRILG</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2020-10-07" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>E3SW30</accession>
    <name>E3SW30_9VIRU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <organism evidence="1 2">
        <name type="scientific">Pineapple bacilliform CO virus</name>
        <dbReference type="NCBI Taxonomy" id="2033633"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Pararnavirae</taxon>
            <taxon>Artverviricota</taxon>
            <taxon>Revtraviricetes</taxon>
            <taxon>Ortervirales</taxon>
            <taxon>Caulimoviridae</taxon>
            <taxon>Badnavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2009-10" db="EMBL/GenBank/DDBJ databases">
            <title>Sequencing and analysis of the complete genome sequence of Pineapple bacilliform comosus virus.</title>
            <authorList>
                <person name="Wu L.T."/>
                <person name="Li H.P."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
    </reference>
    <dbReference type="EMBL" id="GU121676">
        <property type="protein sequence ID" value="ADN88181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000202696">
        <property type="component" value="Genome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADN88181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000202696"/>
        </source>
    </evidence>
    <sequence length="123" mass="14013" checksum="B8A9D82BB3255B75" modified="2011-01-11" version="1">MSLQEKRQNKAYKEALEETRNLWDTAVGFVDKSEIVANIGTITKQLNTVLYLLLDLSERISRLEKVAPPQTKDISKDLEKLQKQLSGLRISEEGGSNLKQKKVPLRVFRNPFEILKGEISTSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2011-01-11" modified="2022-08-03" version="71" xmlns="http://uniprot.org/uniprot">
    <accession>E3SW31</accession>
    <name>E3SW31_9VIRU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA-directed DNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.49</ecNumber>
        </recommendedName>
    </protein>
    <organism evidence="20 21">
        <name type="scientific">Pineapple bacilliform CO virus</name>
        <dbReference type="NCBI Taxonomy" id="2033633"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Pararnavirae</taxon>
            <taxon>Artverviricota</taxon>
            <taxon>Revtraviricetes</taxon>
            <taxon>Ortervirales</taxon>
            <taxon>Caulimoviridae</taxon>
            <taxon>Badnavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="20 21" key="1">
        <citation type="submission" date="2009-10" db="EMBL/GenBank/DDBJ databases">
            <title>Sequencing and analysis of the complete genome sequence of Pineapple bacilliform comosus virus.</title>
            <authorList>
                <person name="Wu L.T."/>
                <person name="Li H.P."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
    </reference>
    <dbReference type="EC" id="2.7.7.49" evidence="1"/>
    <dbReference type="EMBL" id="GU121676">
        <property type="protein sequence ID" value="ADN88182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000202696">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003964">
        <property type="term" value="F:RNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001995">
        <property type="entry name" value="Peptidase_A2_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018061">
        <property type="entry name" value="Retropepsins"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002156">
        <property type="entry name" value="RNaseH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000477">
        <property type="entry name" value="RT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041373">
        <property type="entry name" value="RT_RNaseH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17917">
        <property type="entry name" value="RT_RNaseH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00077">
        <property type="entry name" value="RVP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00078">
        <property type="entry name" value="RVT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00098">
        <property type="entry name" value="zf-CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00343">
        <property type="entry name" value="ZnF_C2HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="SSF50630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="SSF57756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50175">
        <property type="entry name" value="ASP_PROT_RETROV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50879">
        <property type="entry name" value="RNASE_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50878">
        <property type="entry name" value="RT_POL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="15" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="12" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0695">RNA-directed DNA polymerase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="13" id="KW-1160">Virus entry into host cell</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="16">
        <location>
            <begin position="816"/>
            <end position="832"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A2" evidence="17">
        <location>
            <begin position="1160"/>
            <end position="1203"/>
        </location>
    </feature>
    <feature type="domain" description="Reverse transcriptase" evidence="18">
        <location>
            <begin position="1379"/>
            <end position="1559"/>
        </location>
    </feature>
    <feature type="domain" description="RNase H type-1" evidence="19">
        <location>
            <begin position="1679"/>
            <end position="1784"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="15">
        <location>
            <begin position="986"/>
            <end position="1116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012493"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ADN88182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000202696"/>
        </source>
    </evidence>
    <sequence length="1907" mass="217640" checksum="E9A46F1710335B7D" modified="2011-01-11" version="1">MMNTTPREVEQPLVEDQIWGYRWTQRACYEAQEAGRRLANIGRTILGMQPREHTLAMVIDPEAELQRSMSERARTVPAEVLYMTRRDNIHHRVYYFRCEERMRVLDSDQQDRTFITPEAFEHLKEAGFEYIHLGILQVRFQILHRRYAGTMAFIAYRDTRWDNRKSIIATMEVDLSEGNQIVYIIPDMMTTIRDCYEHIQISIRTIGYDDDWNGESNLLITRGMTARLSNTPNVGFAYNISRVADYLKSKGVKAIDASKEKTTQFKGREWVLKPSQASVTPIMPTIADAHERYDGSLGIKFGNYQEASTSGPPQYNEHDDEIVEDVVLAIIDDLPEDDEEDYFQQILNDYQPDSQVALDYPVLIPTEDPFASSYAPLTPPALTPLPASGDNTPDGIRPVLQRIVVGEKDFTDFNTLDFTLRGLDVELQTTDDFTAEEEELIGSFLNQLEEEENLYCKESPSCLFTDDNNGDDEGEHHVVAASLEYPELRKISEIINSTVVDSNPGNQYMIGDTDMDGPPGYAPAQAQAAAVPPTYGGTSPSVRGPFRWKNPHEHFELPSAHQLSGAIFVMPQNFDPKVFGRWESIVLNHLADRNFPTALDKIIYVENLLGEMEKITFQTWRMRYEEEFVSLQTRVLGNNGTQNLLAQIRKVFFLEDPKGGTTVSQDAAYKAIKSLTCQEMSGQAIRKYMSSYFDLAARSGRMWVNEELSDDFFTKLPMGLGDRVRQAFLSRYPGNTIGVPARITFTQQYLEEVCREAAYQRSLKTLDFCKEFPIPNFYKGPQKKYGVRKSTTYRGKPHKSHIRIDKTKHLKNRKCKCYICGEEGHFARDCKNPKKIVDRVHVLEELDIQDGMDVVSVGENEDELSDIYSVSEGEESTHEAYHVFSLVEDCLIGKANTWRYQVRVSPKEYYCKHEWGFNSKILKNCRACGATAQTGERMDCPLCNMTICSSCSNYCFDITIPKNEERVQAIVSSSTASREESWKTIALEQRKLIKKLENEKEALIVELNQALEQLKQTKGKGIPEHQDDALEKELLKELLREEKEKAKKAEESLQELLKEEKEKAKKAEESLQELLRKEKEKVRKAEESQKETALLVEKLQEQLQQALSNKTTCNEEVREEVAVITEEENLSYSAIKSPTRYNGLYNLKAKIEVEGETVVLNAILDTGATACIIQEAKVPDRPCEQAAVSYTLHGVNSTTSGRKVLKGGKLWLGEQFFRLPRTLVADMVLTEGVEMIVGCNFLRSLEGGLRIEGEVVTFYKLVTNVQSCRSTHAFGAIIEELEMAEDEYIDLNLMLATEPAVGEEFAKLPLYQQLKAEGFIGENPLLHWQRNQVICELQIKNPELTIEDRPLKHVTPALKEAMQKHVDKLLELKVIRPSTSRHRTTAMIVYSGTEVDPVTKKEKRGKERLVFNYKRLNDNTEKDQYSLPGISTILQKIGHSKIYSKFDPKSGFHQVAMHPDSVPWTAFWAINGLYEWLVMPFGLKNAPAVFQRKMDHCFRGTEDFIAVYIDDILVFSETPEQHKKHLEIFLQIARKNGLVLSPTKMKVGVQQVDFLGATIGNSRIRLQPHIIQKVVQFDNKDLQTTKGLRSFLGILNYARSYIPQMGKLLGPLYSKVSPTGEKRMNKQDWAIIEKIKQMVEQLPELELPPNGSVIVIETDGCMEGWGGICKWKFPGAPRNQEKVCAYASGRFQPIKSTIDAEIQAVINSLDKFKIYYLNQKELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGEDNLLADTLSRLVVMMLHEEAYTEPLQRILPLLSKKEAVHVLTHKPILKCGCGKTAIRKMSRTSRNPNRHYYCCEQEKCHCWWWEDHLLQFAAERGALEQEALRMEELFDRLQFNTNEPHGGPLEDDDQASLLDAVGL</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>