<?xml version="1.0" encoding="UTF-8"?>
<uniprot xmlns="http://uniprot.org/uniprot"
 xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
 xsi:schemaLocation="http://uniprot.org/uniprot http://www.uniprot.org/docs/uniprot.xsd">
<entry dataset="TrEMBL" created="2015-02-04" modified="2022-05-25" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0A0U7L8</accession>
    <name>A0A0A0U7L8_9GEMI</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Capsid protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Coat protein</fullName>
        </alternativeName>
    </protein>
    <organism evidence="10 12">
        <name type="scientific">Chickpea yellow dwarf virus</name>
        <dbReference type="NCBI Taxonomy" id="1568974"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cressdnaviricota</taxon>
            <taxon>Repensiviricetes</taxon>
            <taxon>Geplafuvirales</taxon>
            <taxon>Geminiviridae</taxon>
            <taxon>Mastrevirus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 12" key="1">
        <citation type="submission" date="2014-08" db="EMBL/GenBank/DDBJ databases">
            <title>Characterisation of a novel dicot-infecting mastrevirus species from Pakistan.</title>
            <authorList>
                <person name="Kraberger S."/>
                <person name="Mumtaz H.H."/>
                <person name="Briddon R.W."/>
                <person name="Martin D.P."/>
                <person name="Varsani A."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CpYDV-PK_PK103_2012</strain>
            <strain evidence="11">CpYDV-PK_PK37_2012</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Binds the genomic viral ssDNA and shuttles it into and out of the cell nucleus.</text>
    </comment>
    <comment type="function">
        <text evidence="7">Encapsidates the viral genome into characteristic twinned ('geminate') particles. Binds the genomic viral ssDNA and shuttles it into and out of the cell nucleus. Plays a role in protection of the genome from degradation, virus acquisition and transmission by insect vectors, infectivity, and systemic movement. The CP of monopartite geminiviruses is absolutely essential for virus movement.</text>
    </comment>
    <comment type="function">
        <text evidence="9">Encapsidates the viral genome into characteristic twinned ('geminate') particles. Plays a role in protection of the genome from degradation, virus acquisition and transmission by insect vectors, infectivity, and systemic movement. The CP of monopartite geminiviruses is absolutely essential for virus movement.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homomultimer. Interacts with the movement protein. Binds to single-stranded and double-stranded viral DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Host nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 9">Virion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the geminiviridae capsid protein family.</text>
    </comment>
    <dbReference type="EMBL" id="KM377674">
        <property type="protein sequence ID" value="AIW42775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="KM377675">
        <property type="protein sequence ID" value="AIW42779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_009104362.1">
        <property type="nucleotide sequence ID" value="NC_025475.1"/>
    </dbReference>
    <dbReference type="GeneID" id="22203876"/>
    <dbReference type="KEGG" id="vg:22203876"/>
    <dbReference type="Proteomes" id="UP000202447">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042025">
        <property type="term" value="C:host cell nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0039615">
        <property type="term" value="C:T=1 icosahedral viral capsid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0075732">
        <property type="term" value="P:viral penetration into host nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000143">
        <property type="entry name" value="Gemcoat_MSV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000263">
        <property type="entry name" value="GV_A/BR1_coat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029053">
        <property type="entry name" value="Viral_coat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00844">
        <property type="entry name" value="Gemini_coat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00223">
        <property type="entry name" value="GEMCOATARBR1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00226">
        <property type="entry name" value="GEMCOATMSV"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="6 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1048">Host nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-1140">T=1 icosahedral capsid protein</keyword>
    <keyword evidence="9" id="KW-1163">Viral penetration into host nucleus</keyword>
    <keyword evidence="5 9" id="KW-0946">Virion</keyword>
    <keyword evidence="9" id="KW-1160">Virus entry into host cell</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="AIW42775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="AIW42779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000202447"/>
        </source>
    </evidence>
    <sequence length="254" mass="28468" checksum="F708705356FE7586" modified="2015-02-04" version="1">MPGPFSGKTYSRKKGKYAKAYKALGVKNQKELEELVNAPACPVTPRPALQVAEYFWTTDKNGMIFRSGGGTAHFTMYPQGSNENCRHSNQTNTYKMAIKCWVALDPTFYKKVACVPVHFWLVYDKDPGNTLPGCSTIFDTLYQDYPGTWTVSRNVSRRFVVKKHWHIILASNGTNPTQDQDPAKYAGPGPVFQWKHMNKFFKRLGVRTDWKNSATGEVADIKSGALYLVCAPSGGAVVRVGGRFRMYFKSVGNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-02-04" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0A0U8Q7</accession>
    <name>A0A0A0U8Q7_9GEMI</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 16">Replication-associated protein</fullName>
            <shortName evidence="16">Rep</shortName>
            <ecNumber evidence="16">3.1.21.-</ecNumber>
        </recommendedName>
    </protein>
    <organism evidence="19 20">
        <name type="scientific">Chickpea yellow dwarf virus</name>
        <dbReference type="NCBI Taxonomy" id="1568974"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cressdnaviricota</taxon>
            <taxon>Repensiviricetes</taxon>
            <taxon>Geplafuvirales</taxon>
            <taxon>Geminiviridae</taxon>
            <taxon>Mastrevirus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="submission" date="2014-08" db="EMBL/GenBank/DDBJ databases">
            <title>Characterisation of a novel dicot-infecting mastrevirus species from Pakistan.</title>
            <authorList>
                <person name="Kraberger S."/>
                <person name="Mumtaz H.H."/>
                <person name="Briddon R.W."/>
                <person name="Martin D.P."/>
                <person name="Varsani A."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CpYDV-PK_PK103_2012</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="15">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="15">Divalent metal cations, possibly Mg(2+) or Mn(2+).</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homooligomer. Rep binds to repeated DNA motifs (iterons). Forms the O-complex, which is a Rep-DNA complex involved in the initiation of RCR. Part of the C- and V-complexes which are RepA-Rep-DNA complexes involved in the c-sense and v-sense transcription.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 16">Host nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 16">Belongs to the geminiviridae Rep protein family.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.-" evidence="16"/>
    <dbReference type="EMBL" id="KM377674">
        <property type="protein sequence ID" value="AIW42777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_009104363.1">
        <property type="nucleotide sequence ID" value="NC_025475.1"/>
    </dbReference>
    <dbReference type="GeneID" id="22203877"/>
    <dbReference type="KEGG" id="vg:22203877"/>
    <dbReference type="Proteomes" id="UP000202447">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016888">
        <property type="term" value="F:endodeoxyribonuclease activity, producing 5'-phosphomonoesters"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001301">
        <property type="entry name" value="Gemini_AL1_CLV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001191">
        <property type="entry name" value="Gemini_AL1_REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022690">
        <property type="entry name" value="Gemini_AL1_REP_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022692">
        <property type="entry name" value="Gemini_AL1_REP_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00799">
        <property type="entry name" value="Gemini_AL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08283">
        <property type="entry name" value="Gemini_AL1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00227">
        <property type="entry name" value="GEMCOATAL1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00228">
        <property type="entry name" value="GEMCOATCLVL1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0190">Covalent protein-DNA linkage</keyword>
    <keyword evidence="13" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7 16" id="KW-1048">Host nucleus</keyword>
    <keyword evidence="11 16" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0540">Nuclease</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0678">Repressor</keyword>
    <feature type="domain" description="Gemini_AL1" evidence="17">
        <location>
            <begin position="10"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Gemini_AL1_M" evidence="18">
        <location>
            <begin position="121"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="active site" description="For DNA cleavage activity" evidence="14">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00014531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR601191-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR601191-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU361249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF00799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF08283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="AIW42777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000202447"/>
        </source>
    </evidence>
    <sequence length="336" mass="39349" checksum="5DB72A4D537C6FF8" modified="2015-02-04" version="1">MPRRTNNNSFRLQTKYVFLTYPHSSSTAENLRDFLWSKLTSLAIFFIAIATELHQDGSPHLHCLIQLDKRCDIRDPSFFDFEGNHPNIQPAKNSKQVLEYISKDGNIITRGDFRNHRVSPTKSDERWRTIIQTATSKEEYLEMIKQEFPHEWATKLHWLEYSASKLFPDIEPPYQSPFPDEFLHCHEEITEWLNRDLYVEPEQLQLRRRSLYICGPSRTGKTSWARSLGRHNYFNGGVDFTTYDVNATYNVIDDIPFKFCPNWKQLVGSQKDFTVNPKYGKKKRVKGGIPCIIIVNNDEDWLESMSDSQREYFYLNCKIHIMSEGETFIASAASSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-02-04" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0A0UCY7</accession>
    <name>A0A0A0UCY7_9GEMI</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Movement protein</fullName>
        </recommendedName>
    </protein>
    <organism evidence="9 10">
        <name type="scientific">Chickpea yellow dwarf virus</name>
        <dbReference type="NCBI Taxonomy" id="1568974"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cressdnaviricota</taxon>
            <taxon>Repensiviricetes</taxon>
            <taxon>Geplafuvirales</taxon>
            <taxon>Geminiviridae</taxon>
            <taxon>Mastrevirus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-08" db="EMBL/GenBank/DDBJ databases">
            <title>Characterisation of a novel dicot-infecting mastrevirus species from Pakistan.</title>
            <authorList>
                <person name="Kraberger S."/>
                <person name="Mumtaz H.H."/>
                <person name="Briddon R.W."/>
                <person name="Martin D.P."/>
                <person name="Varsani A."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CpYDV-PK_PK103_2012</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the viral transport within, and between cells.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Interacts with the capsid protein (CP). Part of a MP-CP-viral DNA complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Host membrane</location>
            <topology evidence="3">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the mastrevirus movement protein family.</text>
    </comment>
    <dbReference type="EMBL" id="KM377674">
        <property type="protein sequence ID" value="AIW42774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_009104361.1">
        <property type="nucleotide sequence ID" value="NC_025475.1"/>
    </dbReference>
    <dbReference type="GeneID" id="22203879"/>
    <dbReference type="KEGG" id="vg:22203879"/>
    <dbReference type="Proteomes" id="UP000202447">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033644">
        <property type="term" value="C:host cell membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046740">
        <property type="term" value="P:transport of virus in host, cell to cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002621">
        <property type="entry name" value="Gemini_mov"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01708">
        <property type="entry name" value="Gemini_mov"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00014660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="AIW42774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000202447"/>
        </source>
    </evidence>
    <sequence length="101" mass="11165" checksum="070A7BCE917C4D6B" modified="2015-02-04" version="1">MLPAKYQVFPGENYSYTPTFAGSYQEVPTSHNSSGETFNKVFVALIVILISVGVCYLAYVLFVKDLILLLKAKKQRTTTEIGFGNTPGRPNSRRQEDAGTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-02-04" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0A0UF55</accession>
    <name>A0A0A0UF55_9GEMI</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Replication-associated protein</fullName>
            <shortName evidence="13">Rep</shortName>
            <ecNumber evidence="13">3.1.21.-</ecNumber>
        </recommendedName>
    </protein>
    <organism evidence="17 18">
        <name type="scientific">Chickpea yellow dwarf virus</name>
        <dbReference type="NCBI Taxonomy" id="1568974"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cressdnaviricota</taxon>
            <taxon>Repensiviricetes</taxon>
            <taxon>Geplafuvirales</taxon>
            <taxon>Geminiviridae</taxon>
            <taxon>Mastrevirus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2014-08" db="EMBL/GenBank/DDBJ databases">
            <title>Characterisation of a novel dicot-infecting mastrevirus species from Pakistan.</title>
            <authorList>
                <person name="Kraberger S."/>
                <person name="Mumtaz H.H."/>
                <person name="Briddon R.W."/>
                <person name="Martin D.P."/>
                <person name="Varsani A."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CpYDV-PK_PK103_2012</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="12">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="12">Divalent metal cations, possibly Mg(2+) or Mn(2+).</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Homooligomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Host nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the geminiviridae Rep protein family.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.-" evidence="13"/>
    <dbReference type="EMBL" id="KM377674">
        <property type="protein sequence ID" value="AIW42776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_009104364.1">
        <property type="nucleotide sequence ID" value="NC_025475.1"/>
    </dbReference>
    <dbReference type="GeneID" id="22203878"/>
    <dbReference type="KEGG" id="vg:22203878"/>
    <dbReference type="Proteomes" id="UP000202447">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016888">
        <property type="term" value="F:endodeoxyribonuclease activity, producing 5'-phosphomonoesters"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001146">
        <property type="entry name" value="Gemini_AL1_MSV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001191">
        <property type="entry name" value="Gemini_AL1_REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022690">
        <property type="entry name" value="Gemini_AL1_REP_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022692">
        <property type="entry name" value="Gemini_AL1_REP_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00799">
        <property type="entry name" value="Gemini_AL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08283">
        <property type="entry name" value="Gemini_AL1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00227">
        <property type="entry name" value="GEMCOATAL1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00229">
        <property type="entry name" value="GEMCOATMSVL1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5 13" id="KW-1048">Host nucleus</keyword>
    <keyword evidence="9 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0540">Nuclease</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0678">Repressor</keyword>
    <feature type="domain" description="Gemini_AL1" evidence="15">
        <location>
            <begin position="10"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Gemini_AL1_M" evidence="16">
        <location>
            <begin position="121"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="228"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="228"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="258"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="active site" description="For DNA cleavage activity" evidence="11">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601191-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601191-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU361249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF08283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="AIW42776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000202447"/>
        </source>
    </evidence>
    <sequence length="295" mass="33861" checksum="7246D03DA8770118" modified="2015-02-04" version="1">MPRRTNNNSFRLQTKYVFLTYPHSSSTAENLRDFLWSKLTSLAIFFIAIATELHQDGSPHLHCLIQLDKRCDIRDPSFFDFEGNHPNIQPAKNSKQVLEYISKDGNIITRGDFRNHRVSPTKSDERWRTIIQTATSKEEYLEMIKQEFPHEWATKLHWLEYSASKLFPDIEPPYQSPFPDEFLHCHEEITEWLNRDLYVVSVDSYQLLHPHLSLETATEDLIWMDDYTRNPNNSNSGEDPSTSADQVVPERPVGPEVWEDTTTSTEGSISLHTTSTQHTTSSTTSPSSSAPTGSS</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>