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<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPT9</accession>
    <name>A0A087RPT9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase-reductase SDR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01502</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000087">
        <property type="protein sequence ID" value="KFM15493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15493">
        <property type="protein sequence ID" value="KFM15493"/>
        <property type="gene ID" value="AAA799P11_01502"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="13643" checksum="EEE3D59363E9A5F1" modified="2014-10-29" version="1" fragment="single">RVEFLAGHVEKNGGKVACFISESTPKELQEQISSKFHAHVVDIKNPDEVEKWLNTAKTNIGDILAVIHVTGKLPEMSKLTELDRASWEALTEKFISTPATVAQRTLEQFVPGGSKDPRLFKDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQD0</accession>
    <name>A0A087RQD0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-dehydroquinate dehydratase protein</fullName>
            <ecNumber evidence="1">4.2.1.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01489</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000079">
        <property type="protein sequence ID" value="KFM15684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15684">
        <property type="protein sequence ID" value="KFM15684"/>
        <property type="gene ID" value="AAA799P11_01489"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00502">
        <property type="entry name" value="DHQase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001381">
        <property type="entry name" value="DHquinase_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01487">
        <property type="entry name" value="DHquinase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="178" mass="20637" checksum="6682B242CCF95D3E" modified="2014-10-29" version="1" fragment="single">MKYKTCVSIAEKTPNKVKQTLKIALKKSDYVEIRFDFLKIEQIPETLELIKKDLKKSVCTLRPKTEGGQFPGNEKERIAIIKLIAEYNPFLLDVEFNTLKKNSSLVKYLKSTKTKLLVSWHDFKKTPSSTELKNKMKQMRKFSNFVKIVSTAKSTDDSTRMLELYSKRGKDNLISFAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RR54</accession>
    <name>A0A087RR54_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thioldisulfide interchange protein DsbD</fullName>
            <ecNumber evidence="3">1.8.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01455</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000063">
        <property type="protein sequence ID" value="KFM15958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15958">
        <property type="protein sequence ID" value="KFM15958"/>
        <property type="gene ID" value="AAA799P11_01455"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047134">
        <property type="term" value="F:protein-disulfide reductase (NAD(P)) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003834">
        <property type="entry name" value="Cyt_c_assmbl_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02683">
        <property type="entry name" value="DsbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="211"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="DsbD" evidence="2">
        <location>
            <begin position="53"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM15958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="236" mass="25075" checksum="4698C865F933BED0" modified="2014-10-29" version="1" fragment="single">NMSSVIIAKKSMVIISFALFSLIFLGIIFSLGTNFTVEEKEHTTYLSWIVIAYVAGLSMIVLPCTLPLVFIIVPLSMGQGYKKGLTMALLFGLGLTITIASYGIAIAAIGQSASLDQASTIMFLIAGIAAFIFGLSQLKLISLRLPSYSGTPKFIQKRGEFAKSFFMGLLLGNAGVGCPNPLFYWLLIYIAGTGSIEVGASLGIVHGVGRAIPLILMSVLAVIGINATKSLTLKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTP2</accession>
    <name>A0A087RTP2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATPase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01398</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000040">
        <property type="protein sequence ID" value="KFM16846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16846">
        <property type="protein sequence ID" value="KFM16846"/>
        <property type="gene ID" value="AAA799P11_01398"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="421" mass="49223" checksum="F39741E30D6E456C" modified="2014-10-29" version="1" fragment="single">DRWQNLAKFSVQKYGEAISLRKYIPPTKIAGDYPQITSCESCILLLIKKEDRFMTHEEIFEKLDVKFGVDKRLVYESIEYLVREKYLDRRIEKIEDANQFISRFALTKLAINTFFSTTAMGRRAGSTLHLAAIFFMTKIMQDQFNYCIVDLGDSAEQRPDILVFKPETDRDVNGRLRYDLENWSDEIIAIEVEVDPTKHAGQVVENYTKNHEKEFAVWFVVFSEKHRDYIKNILDEKGVDEKQYDIMILNKEQILKSYESLLEDSKSSTHLSEIESQFLAVIGKSPATPQNITSKMHVSPDVLLEALRSLEKKNLVEPGYCETKKTKTDLKHNAITKKTQEKKYYELTPQGKEILQDEKPKESPTEDNYVDYLPMQSDDVLVEHLKDPNYEEKQNVILILENRGYRVSIKNNKVKLYKRRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUD6</accession>
    <name>A0A087RUD6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sodium-hydrogen exchanger protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01386</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000038">
        <property type="protein sequence ID" value="KFM17090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17090">
        <property type="protein sequence ID" value="KFM17090"/>
        <property type="gene ID" value="AAA799P11_01386"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1317"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="7906" checksum="A47B70965BB429FE" modified="2014-10-29" version="1">MQNIPLQLNPSGIQSSLNNTVSSLIEQVTPELPHTSFVTDLAFIMIIGAVVTLAFFKIKQPLIIGYLSSKYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUF7</accession>
    <name>A0A087RUF7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">DNA-RNA-binding protein Alba</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">AAA799P11_01381</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the histone-like Alba family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000037">
        <property type="protein sequence ID" value="KFM17111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17111">
        <property type="protein sequence ID" value="KFM17111"/>
        <property type="gene ID" value="AAA799P11_01381"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1311"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01122">
        <property type="entry name" value="AlbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036882">
        <property type="entry name" value="Alba-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013795">
        <property type="entry name" value="DNA/RNA-bd_Alba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002775">
        <property type="entry name" value="DNA/RNA-bd_Alba-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01918">
        <property type="entry name" value="Alba"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028732">
        <property type="entry name" value="Alba"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82704">
        <property type="entry name" value="SSF82704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Alba" evidence="10">
        <location>
            <begin position="13"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM17111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="98" mass="10839" checksum="D6047A3CA92A8EFB" modified="2014-10-29" version="1" fragment="single">KSETSKPSEERDVVFVGTKPIMTYVSATLTQLSTRPTVTIKARGKRITQAVDVSQMIVKRMDSVGYVISDVRISSDSLTSQDGKQRNVSTMEIDISKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUJ8</accession>
    <name>A0A087RUJ8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Integrase-recombinase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01378</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17152">
        <property type="protein sequence ID" value="KFM17152"/>
        <property type="gene ID" value="AAA799P11_01378"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="170" mass="19782" checksum="D977B3CD32A90073" modified="2014-10-29" version="1">MGHKGDIEAKYTTNKHKLADSLIKDMREAYERSQNFLSPFEQEETSEKNKKELLLEMWKEQAQLYGIDPMKIRIEKQRTQQNQKTILKSTDSADEEIGAIKAAIQKMIRKDNVTKTDGKKTYESKLVDNEEDLVSCVQNGWEVIKELNSGKVLLRKSISKDWIRMPHHSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUU1</accession>
    <name>A0A087RUU1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01363</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17245">
        <property type="protein sequence ID" value="KFM17245"/>
        <property type="gene ID" value="AAA799P11_01363"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1298"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027560">
        <property type="entry name" value="PEFG-CTERM"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04296">
        <property type="entry name" value="PEFG-CTERM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="400"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="429" mass="48656" checksum="4D2A9DDE051F0A9B" modified="2014-10-29" version="1">MGIDTISSVDVAGKEISISVEMPMYFENEQEQITITAINKESDEPAKNVTFLIGLFHSNEMIFRNYFFTENGVLPIKVSSQEKYDNFVINGEQDSLLGAYHGTESSPIEIAGPVFDSGGLYTFEIEVRTIDEPTNIIEDSGVYRADLTIVETTSHPQKDAEGNDVQFRLKSYFDQIQNFQYDPEAKQVTFEMPFDWGESSMSHVSVVHEEVHFPKDFVEFLTPSYSGYANGIELFKSSVSIDDYTEEDERIVHFVLLQDHLRFIKNEMKKLDEPLPDKIVFTLSTSEKPSFPLEAYTKSEDFKVNLSWDPVDLEPGVETNFVFTIRDGWTNEPLRNSDCAFVIIQNGEEIHRISGVAQVGGEFEKYTFAEDQTGPTIIKFENIRNTGQETEFGMVVAPEFGTIALLVLIVSIASVIFVTRKNSFRLQQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVB3</accession>
    <name>A0A087RVB3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Blue copper domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01343</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000033">
        <property type="protein sequence ID" value="KFM17417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17417">
        <property type="protein sequence ID" value="KFM17417"/>
        <property type="gene ID" value="AAA799P11_01343"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1283"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="193"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="240" mass="25046" checksum="7513A6556001142C" modified="2014-10-29" version="1" fragment="single">VLFAMVAGLVATTPAAFADHPEVTIVPAAGSGAPGCEETADECYIPSTATVAVGGTVIMSNTDTAAHTFTSGTPDDGPDGIFDTSLLMAGSSFEWSPTEAGEYPYFCMVHPWMQGTIIAEAEGAEESADEHGDEMMMPSGDATATGMLSDGTMVSIWASTPTAGEAMEISIEFADAEHVNHDISVTQNGNEVLNDEGAHHHEGTGMHTTAPLSSSDPVDITITFQGMVYLILKQDQLVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVF3</accession>
    <name>A0A087RVF3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Inosine-5'-monophosphate dehydrogenase protein</fullName>
            <ecNumber evidence="6">1.1.1.205</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01338</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IMPDH/GMPR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000032">
        <property type="protein sequence ID" value="KFM17457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17457">
        <property type="protein sequence ID" value="KFM17457"/>
        <property type="gene ID" value="AAA799P11_01338"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001674">
        <property type="entry name" value="GMP_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005990">
        <property type="entry name" value="IMP_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001093">
        <property type="entry name" value="IMP_DH_GMPRt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11911">
        <property type="entry name" value="PTHR11911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00958">
        <property type="entry name" value="GMP_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00478">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0129">CBS domain</keyword>
    <keyword evidence="2 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="5">
        <location>
            <begin position="92"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="5">
        <location>
            <begin position="151"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM17457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="251" mass="27130" checksum="5799EEF1F62327EA" modified="2014-10-29" version="1" fragment="single">MEFKEGLTFDDVLLVPKYSDITSRSQTDLSTKLSRNITINIPFVSANMDTVTESSMAVAMARVGGIGIIHRFLTIREQANEVLKVKRSGSVMIENPYSISLDKSIQDALDYAEDKEISGLLVVDSSSKLVGIVTERDLLFAGSNGTVADVMTKDVVTAKPGVSLDEAKDILHKHRIEKLPIVDDSGVINGLITSKDITNNTDYPNASKDKKGRPLVGAAGDDRAVGVVGDERKYGNIVMIRVVDSIDAMTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL0</accession>
    <name>A0A087RVL0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">von Willebrand factor type A protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17514">
        <property type="protein sequence ID" value="KFM17514"/>
        <property type="gene ID" value="AAA799P11_01310"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1249"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="1">
        <location>
            <begin position="98"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="270" mass="30307" checksum="3543785F5525B1EC" modified="2014-10-29" version="1" fragment="single">KGENVIDEYNVLLDEDKKTENKGLMPEAIGIQIPSTRNVDETTIYDMSLINGLKTKFKEWKTGWKEQHLSSGDEFDEENYIEGNEPFFTDIKKSIKTKIVILLDHSSSISSDAIEYKKATLALCEVLAYLKVKFAVYAFSTENRSVVCWSIKPDNMKWNSVTAKRLAQIVANGSTPLAEVYDKMFPVLQSKRPDIFLTLTDGEPSDPDAVRNMTKLLKGLGISMVALGLGPNTVRATTIANNLRHLGYEKTMAVSRLRDIPNKVIKILDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWR1</accession>
    <name>A0A087RWR1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATPase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01303</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000028">
        <property type="protein sequence ID" value="KFM17915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17915">
        <property type="protein sequence ID" value="KFM17915"/>
        <property type="gene ID" value="AAA799P11_01303"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1243"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1080.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003367">
        <property type="entry name" value="Thrombospondin_3-like_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028974">
        <property type="entry name" value="TSP_type-3_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02412">
        <property type="entry name" value="TSP_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103647">
        <property type="entry name" value="SSF103647"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="233" mass="25863" checksum="76F8D1B70C870913" modified="2014-10-29" version="1" fragment="single">PDSDNDGINDYNDHCPNQPETYNGILDLDGCPDDYIIGHDRDQDGIPDAIDACPTAKETWNKFQDDDGCPDTISESFVVDSDNDGIPDVDDDCPLVAENYNGFQDEDGCPDVDDTQPDSDGDGVPDVMDLCPTQNETWNRYVDYDGCPDLIPLGNMVVDNDEDGINDDVDLCPNLKESWNKYNDEDGCPDIAPEQSRYKHDADLDDIINEYDLCPLEPEDYDGDLDTDGCPDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWU1</accession>
    <name>A0A087RWU1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">OB-fold tRNA-helicase-type nucleic acid binding-protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01298</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17945">
        <property type="protein sequence ID" value="KFM17945"/>
        <property type="gene ID" value="AAA799P11_01298"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1238"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035203">
        <property type="entry name" value="Cdc24_OB3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17244">
        <property type="entry name" value="CDC24_OB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CDC24_OB3" evidence="1">
        <location>
            <begin position="393"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="466" mass="51079" checksum="A13E3F389224840E" modified="2014-10-29" version="1">MSEFDSLIDKLIEQKPELTREIIEEQIKLKKEKIGAGYLTDQGALFLIASDYGVTLSGPLKVEMSLKDLYAGAKEISLETRVLNLSPAKQFSRKDGSPFYLRTMTVYDNANSTASVKLWDEKANLPGIENLKPGDLIKIIKAYVKSDLDGSPTINIGSGSNVETTDSASEIPTIDTITRDVSELQEGQKDLVVLGEIDGVISGMEFTNSRGMPGKALRMRLKGKDGSGMRVVLWGKDESSIPNMISQSAKVRLLGVKVKSGNQGLEIHGNDATIIEIEGGKEAEPIIARVLSMSPTENGRNMILAVDNKKNLYNISDSSNSTSICVEGDVIECMPSKIYGNSITLDENSFVRKLDNDESIPSLSQIRTKINDVKVDGSYCIEAIILKVPERREVQTKSGETIALSEMFVEDDTGQIWVKGWRNQARLIDKCELGEIVSITGLNAKAGLEGRIEMFLTAFSKITKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV8</accession>
    <name>A0A087RWV8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thioredoxin-1 protein</fullName>
            <ecNumber evidence="3">1.8.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01270</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.9" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17962">
        <property type="protein sequence ID" value="KFM17962"/>
        <property type="gene ID" value="AAA799P11_01270"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1218"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000077">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="1">
        <location>
            <begin position="32"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000077-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="108" mass="11944" checksum="017A603C5C9BA4C6" modified="2014-10-29" version="1">MGITQISDAKSWEVDVINSDIPVFVDFWAEWCGPCRMVGPVVEELASDYDGKVKFVKVNVDEANELASKYNVFSIPTLILLNKGEIVSQQVGAASKESYKNMIDRALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV9</accession>
    <name>A0A087RWV9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-ribbon domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01276</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17963">
        <property type="protein sequence ID" value="KFM17963"/>
        <property type="gene ID" value="AAA799P11_01276"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1219"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026870">
        <property type="entry name" value="Zinc_ribbon_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13240">
        <property type="entry name" value="zinc_ribbon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="zinc_ribbon_2" evidence="1">
        <location>
            <begin position="96"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="119" mass="13095" checksum="598C77630D1262D0" modified="2014-10-29" version="1">MEVFDGKKAAQEYMSKHTLAFSTPELTLMRFAFWLGDSVPDPNNEGKGIPRMMTFLTEQDFEPVLIDDEKYEPSGAVKSSGLVGNAYTEQKTDGKFCSECGTSLSATAKFCPECGTTQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY4</accession>
    <name>A0A087RWY4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01253</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17988">
        <property type="protein sequence ID" value="KFM17988"/>
        <property type="gene ID" value="AAA799P11_01253"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="52" mass="5879" checksum="E89906226F979200" modified="2014-10-29" version="1">MLELTKVQTGILEAFFDIQHKNQDPSRGISSYAIRNQGISGRTFDINKNVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX74</accession>
    <name>A0A087RX74_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000023">
        <property type="protein sequence ID" value="KFM18078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18078">
        <property type="protein sequence ID" value="KFM18078"/>
        <property type="gene ID" value="AAA799P11_01235"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="257" mass="29674" checksum="AF5102C41C707F53" modified="2014-10-29" version="1">MKTTFFLIVILLMMPITSFAYEPIPITYSADRASVIFDGKWSFFTEWKESTLTDMGNENAQIKLRTAHQNDFIYVLVDFVSDVHLDKKIDMSIICFDSENNKSKLSDENDFCFSVSLGSENGFIYQGGSPFALKQNFEKIYHPDFIAIGGVSDENDRYSKTPHTSYEFKIPLELIGRENVYGFYVGVHDSYTKTTYTWPENIPVDTFTKIAKPNHWGEIYSPDKSLPEFEIPLLIITFSIIFYLVLVNRKPFSMLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI5</accession>
    <name>A0A087RXI5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF35 OB-fold domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18189">
        <property type="protein sequence ID" value="KFM18189"/>
        <property type="gene ID" value="AAA799P11_01220"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1173"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002878">
        <property type="entry name" value="DUF35_OB-fold_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022002">
        <property type="entry name" value="DUF35_Znr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12172">
        <property type="entry name" value="DUF35_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01796">
        <property type="entry name" value="OB_aCoA_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF35_N" evidence="2">
        <location>
            <begin position="11"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="OB_aCoA_assoc" evidence="1">
        <location>
            <begin position="46"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="121" mass="13135" checksum="BC7DC0D3D422FA12" modified="2014-10-29" version="1">MSIEEQVIENAKNGKLLTHKCTDCGYLHLSTAYFCRECGSKGFEDVLLDGVGKIATYTIITVPPAGFEKYTPYAFVVLKLDNSDLRISGFMGGIATPADLPVGTPAKITGFDERGIIIEKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM1</accession>
    <name>A0A087RXM1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rpl4</name>
        <name evidence="6" type="ORF">AAA799P11_01142</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Forms part of the polypeptide exit tunnel.</text>
    </comment>
    <comment type="function">
        <text evidence="4">One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18225">
        <property type="protein sequence ID" value="KFM18225"/>
        <property type="gene ID" value="AAA799P11_01142"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1103"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01328_A">
        <property type="entry name" value="Ribosomal_L4_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002136">
        <property type="entry name" value="Ribosomal_L4/L1e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013000">
        <property type="entry name" value="Ribosomal_L4/L1e_euk/arc_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023574">
        <property type="entry name" value="Ribosomal_L4_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045240">
        <property type="entry name" value="Ribosomal_L4_euk/arch"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019970">
        <property type="entry name" value="Ribosomall_L4-archaea"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19431">
        <property type="entry name" value="PTHR19431"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00573">
        <property type="entry name" value="Ribosomal_L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52166">
        <property type="entry name" value="SSF52166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03672">
        <property type="entry name" value="rpl4p_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00939">
        <property type="entry name" value="RIBOSOMAL_L1E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="40"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="271" mass="29090" checksum="59EDE943642E70A7" modified="2014-10-29" version="1">MTKADVYTTTGTKDGEVELPPVFSTPFRRELIHKAFTNLTSHKFQPQGRHPTAGQDVVADSNDPPTGQGVSRVARARGGGGGRQGQGAEVASTRGGRQAHPPIVEKVIYKKLNKKEKKLALCSAIAATASKDRVESRGHKVDGIESFPIIVSDDVESVSKTSDVTKILDSLKLTQDVERLQTRKVRSGQSRLRGRSKKVGKSVLFVTKDSSNISKAIGALPGVEATSVKDLSVLDLAPGSDPIRLTVYSKSAIEEIGKIKSTHLEVMAKVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM4</accession>
    <name>A0A087RXM4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">50S ribosomal protein L22</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpl22</name>
        <name evidence="7" type="ORF">AAA799P11_01145</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="4 6">This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 6">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the universal ribosomal protein uL22 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18228">
        <property type="protein sequence ID" value="KFM18228"/>
        <property type="gene ID" value="AAA799P11_01145"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1106"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00336">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01331_A">
        <property type="entry name" value="Ribosomal_L22_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001063">
        <property type="entry name" value="Ribosomal_L22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005721">
        <property type="entry name" value="Ribosomal_L22/L17_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036394">
        <property type="entry name" value="Ribosomal_L22/L17_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11593">
        <property type="entry name" value="PTHR11593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00237">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54843">
        <property type="entry name" value="SSF54843"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01038">
        <property type="entry name" value="uL22_arch_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="155" mass="17650" checksum="D9B38B748767BE8E" modified="2014-10-29" version="1">MIIMGRFGYAFQNYDATRHVRSSVREKDMSHKHAREVAVAIKGLSIEKARDYLQAVINKDRAVAFRRFKNQVGHKADPGMMAGRYPQKTAKEFIKVLDNLESNAEYKGMDLDRLKIVNATVHKGVIVKRFIPRAMGRATPKNNVLTHVELVAQEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN4</accession>
    <name>A0A087RXN4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">50S ribosomal protein L6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">rpl6</name>
        <name evidence="5" type="ORF">AAA799P11_01155</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the universal ribosomal protein uL6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18238">
        <property type="protein sequence ID" value="KFM18238"/>
        <property type="gene ID" value="AAA799P11_01155"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1117"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.930.12">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01365_A">
        <property type="entry name" value="Ribosomal_L6_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000702">
        <property type="entry name" value="Ribosomal_L6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020040">
        <property type="entry name" value="Ribosomal_L6_a/b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036789">
        <property type="entry name" value="Ribosomal_L6_a/b-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002359">
        <property type="entry name" value="Ribosomal_L6_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019907">
        <property type="entry name" value="Ribosomal_L6P_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11655">
        <property type="entry name" value="PTHR11655"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00347">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002162">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56053">
        <property type="entry name" value="SSF56053"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00700">
        <property type="entry name" value="RIBOSOMAL_L6_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L6" evidence="4">
        <location>
            <begin position="15"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L6" evidence="4">
        <location>
            <begin position="99"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="185" mass="20934" checksum="E0D2C69BC989115A" modified="2014-10-29" version="1">MSTSQLEKMQDQVTIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKINLKTIGEKKRDYAILHTARSIIRNICEGLIEGYTIKMKVVFAHFPITVKVEGKKVLIENYQGERAPRSTHIMGNTKVIPKGEDVILTGEVWTDVTQTAANIELTTKVKNKDHRVFLDGIYVYEKKKGIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ0</accession>
    <name>A0A087RXQ0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01176</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18254">
        <property type="protein sequence ID" value="KFM18254"/>
        <property type="gene ID" value="AAA799P11_01176"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1133"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="128" mass="14115" checksum="1A9088BEE39790D6" modified="2014-10-29" version="1">MKQYTVLLCIGVGVIATIGVVFGADFFKFSVTTQDYEIFVDPLLDEQGMFTMGRVTIQNIGAKPITNLHINFGDGDILDIQTLNVGQKIIVSPPPENSMEFVMISADNDIFVNKAYREMPKMVGMMGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR5</accession>
    <name>A0A087RXR5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribofuranosyl 5'-monophosphate syn protein</fullName>
            <ecNumber evidence="5">6.3.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_01191</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.-" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18269">
        <property type="protein sequence ID" value="KFM18269"/>
        <property type="gene ID" value="AAA799P11_01191"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1148"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006188">
        <property type="term" value="P:IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023656">
        <property type="entry name" value="IMP_biosynth_PurP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009720">
        <property type="entry name" value="IMP_biosynth_PurP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010672">
        <property type="entry name" value="IMP_biosynth_PurP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38147">
        <property type="entry name" value="PTHR38147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06849">
        <property type="entry name" value="DUF1246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06973">
        <property type="entry name" value="DUF1297"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004602">
        <property type="entry name" value="ATPgrasp_PurP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1246" evidence="3">
        <location>
            <begin position="19"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1297" evidence="4">
        <location>
            <begin position="177"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="363" mass="41622" checksum="CAC505253978F514" modified="2014-10-29" version="1">MIKSSEIKKIVNDYSDVRIGVLGSHSALEIMDGAKDEDFQTRVFCQKGREGPYQRFNRIADEITVLNKFKEMASAKIQKELRDSNTIIVPHRSLTVYLGYKTIENSFKVPIFGNRKLFQAEERTAKKGQYYLLEKAKIKYPKLFKDPKRINKPCIVKVQEKNRPLERAFFTVSSYKDYVAKSEEKIKQGVIARKDLEKASIEELAIGTYMNFNFFHTPISDQVDFIGIERRLQTNLMDFNALPAKQQLDIDVDLQNIEVGHTPASIRESLLEKVLKMGDKFVKAVKKEYAPGIIGPFSLQSVITKDLELIVYDVSLRVPGNPIVATTSPYTKYQYGQTFGVGRRIAMEIKRAQEEDRLDEIVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR6</accession>
    <name>A0A087RXR6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01192</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18270">
        <property type="protein sequence ID" value="KFM18270"/>
        <property type="gene ID" value="AAA799P11_01192"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1149"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="86" mass="10028" checksum="D3A781D551F45A25" modified="2014-10-29" version="1">MGRTIFVKEIITIAKEPKLCPTCEKEDRLERDLIREERSDGKTILCTRCEALIVVTNLNLRQVELSSRKDDTIMLKEPHLIRKVAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXS3</accession>
    <name>A0A087RXS3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01199</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18277">
        <property type="protein sequence ID" value="KFM18277"/>
        <property type="gene ID" value="AAA799P11_01199"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1156"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="270" mass="29166" checksum="1CC081076971D597" modified="2014-10-29" version="1">MTQTNSISKGKKLIVLGFVAIAVLFIIYARYQDSELLTPSAIEVIQRIAYLFYIALLASFGAIVLGMYRYHKGKIEKNEKNLSTIIALVTWNPKSRKVFVATFVGYGIFFALVSGTLVYQPEVTFSIHYGAEIPSGFVAPCCGELGYMPKIIIYLTEHVGLQIIPINLVLQVIVSYLVALNTTIAVSAYRFSKQESGISGIGAVAGAFIACPTCAGTFFSLFIGTASGIALSLALAQLQTLLIAVSIPILLVTPHIMAKKLRNPDGSCKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY25</accession>
    <name>A0A087RY25_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Na antiporter protein</fullName>
            <ecNumber evidence="6">3.6.3.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01092</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.32" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18379">
        <property type="protein sequence ID" value="KFM18379"/>
        <property type="gene ID" value="AAA799P11_01092"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1053"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006812">
        <property type="term" value="P:cation transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="101"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="161"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="198"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="241"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="280"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="310"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="373"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="5">
        <location>
            <begin position="16"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="416" mass="43777" checksum="0C215430F0D56126" modified="2014-10-29" version="1">MAAEAQFIETIIGVGILLFAAKLMAELFLRLKLPIVLGELLAGMIVGPFALGQFFIIDGKQLLHINEEIKILGEMGAIVILFMAGLEMTPKEFLKGGKASFTVGTLGVVVPFFAGFVIFGLFGFEALESMLIATALTATSIAISIQVLSEFGKLKAPEARLIIGAAVVDDILAIAVLSVVISITGSDAGIESIVITDVMITILQVLGFFAIMLVVAVIVIPKVITPRLWKAKGSVEGIATASFFGAAALAGSIGLSPIVGAFAVGMALSTTKVFEKVENYIGKIGLIFAPLFFAIIGAQVDLRAVDLNILMISGVIIAVAIVTKLLGCGLPAMFFLKNKAQGMRVGIGMISRGEVGLIVAGVGVTAGVLTSEVYSTIVIMVAVTTIITPIWLKMEYRKEQKSGNDEPEQSIEQKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY36</accession>
    <name>A0A087RY36_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01103</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18390">
        <property type="protein sequence ID" value="KFM18390"/>
        <property type="gene ID" value="AAA799P11_01103"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="11987" checksum="EAFD509DA4AB5A74" modified="2014-10-29" version="1">MTVTVTRKPGGITQLFNTDTGRVTYKCKAESAYMLIEAFGGIVKFNQKGAIATVTGHVTSLESCDVLKNGHPEYKDALTAIISAHKEFAKTVSNSYQKEITELENKISSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE9</accession>
    <name>A0A087RYE9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">30S ribosomal protein S27e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rps27e</name>
        <name evidence="4" type="ORF">AAA799P11_01073</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the eukaryotic ribosomal protein eS27 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18503">
        <property type="protein sequence ID" value="KFM18503"/>
        <property type="gene ID" value="AAA799P11_01073"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1035"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00371">
        <property type="entry name" value="Ribosomal_S27e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000592">
        <property type="entry name" value="Ribosomal_S27"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023407">
        <property type="entry name" value="Ribosomal_S27_Zn-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01667">
        <property type="entry name" value="Ribosomal_S27e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="zinc finger region" description="C4-type" evidence="3">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="65" mass="6869" checksum="F081EF01F4CC9666" modified="2014-10-29" version="1">MKKDHVEIPKPSSKFQKVNCNECGELQIVYSHASTQIACNSCGNTIAEATGSKAKINGKVSGSAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF6</accession>
    <name>A0A087RYF6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulatory protein AsnC</fullName>
            <ecNumber evidence="2">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18510">
        <property type="protein sequence ID" value="KFM18510"/>
        <property type="gene ID" value="AAA799P11_01080"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1042"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="36"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="119" mass="13762" checksum="C9F4824F1FF615DA" modified="2014-10-29" version="1">MYSRIKRLVKRKLIERFTIVVNDAELGYNVKALTGINMDTKKRDHIISELFKIDGVREVAEVTGRFDILVTMYSKSLDQMHKMVSERIGRIEGIQSSESFIEMKSRAKAMPYMPSKDSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK9</accession>
    <name>A0A087RYK9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">gacS</name>
        <name evidence="10" type="ORF">AAA799P11_01050</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18563">
        <property type="protein sequence ID" value="KFM18563"/>
        <property type="gene ID" value="AAA799P11_01050"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1012"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="9">
        <location>
            <begin position="333"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="400"/>
            <end position="618"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="611"/>
            <end position="630"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="630" mass="69841" checksum="C1C361DE996A8DEA" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ34</accession>
    <name>A0A087RZ34_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase protein</fullName>
            <ecNumber evidence="7">2.7.8.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01033</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.15" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18738">
        <property type="protein sequence ID" value="KFM18738"/>
        <property type="gene ID" value="AAA799P11_01033"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.994"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008963">
        <property type="term" value="F:phospho-N-acetylmuramoyl-pentapeptide-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003975">
        <property type="term" value="F:UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000715">
        <property type="entry name" value="Glycosyl_transferase_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22926">
        <property type="entry name" value="PTHR22926"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00953">
        <property type="entry name" value="Glycos_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="96"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="122"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="154"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="183"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="206"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="231"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="303"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="326" mass="35069" checksum="79361F812070DD0D" modified="2014-10-29" version="1">MIPAFVSCIIAFFVVFVTTPPLIKFLEKRNMAVKDMNKKENIMIVRPGGPSIILGIIVSEIVLYAFLQLNEIIALIITTSAAFAIGYVDDRKVMGGWFKPVTLAIAAIPIIALGAYDTDLAFPLFGDVQIPALYLGLILLMIPITGNTINSIDVLNGVASGFMVIASFSLSICLFIVQNYEIAIVSLPLGFVSLAFYKYHKIPSRIFPGDSGALTLGAMYGTIAIIGGVEIIAAVALLPAVINSFLFLSSVKKIVEHRQIKGKPVEHTEDFKLKATDDKTAPVTLVRLLLAGGSMSEKQVGFAIFKLGIFSGILAVITAFMMGVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ64</accession>
    <name>A0A087RZ64_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00977</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18768">
        <property type="protein sequence ID" value="KFM18768"/>
        <property type="gene ID" value="AAA799P11_00977"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="6463" checksum="5C1092F9E2A4FD40" modified="2014-10-29" version="1">MVLVLIGIAIGILIVAILIIKAVKTPSRDVLGMDLHCIKCGTKTSGSKCPKCEKNHQSFGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ68</accession>
    <name>A0A087RZ68_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Divalent-cation tolerance protein CutA</fullName>
            <ecNumber evidence="2">4.2.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cutA</name>
        <name evidence="2" type="ORF">AAA799P11_00981</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CutA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18772">
        <property type="protein sequence ID" value="KFM18772"/>
        <property type="gene ID" value="AAA799P11_00981"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.947"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004795">
        <property type="term" value="F:threonine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010038">
        <property type="term" value="P:response to metal ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004323">
        <property type="entry name" value="Ion_tolerance_CutA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23419">
        <property type="entry name" value="PTHR23419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03091">
        <property type="entry name" value="CutA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="11801" checksum="E647982008F9E5EE" modified="2014-10-29" version="1">MKPAVVISTYPDKKSIIKIAKMFVKNKTVACVNISKISSVYSWNKKIENTSEYIAIFKTTTKNKKLLKEKIKETHPYDVPEIAEIDITSINKSYLDWLIDSTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC1</accession>
    <name>A0A087RZC1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00946</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18825">
        <property type="protein sequence ID" value="KFM18825"/>
        <property type="gene ID" value="AAA799P11_00946"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="82" mass="9455" checksum="7C6DCBFA6CAEF4D7" modified="2014-10-29" version="1">MLGNEIKSLFEFVKNTKNSFKNSSNQLKFLVEFKLVMEPQNLEEYIMCTYCDNPLLHCHCMCPYCGKRDRCECALFDAATGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC7</accession>
    <name>A0A087RZC7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00952</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18831">
        <property type="protein sequence ID" value="KFM18831"/>
        <property type="gene ID" value="AAA799P11_00952"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="36" mass="3602" checksum="D2EDE3065D5899EA" modified="2014-10-29" version="1">MAEAGMAAYGAAAGVAITLAIVLFSLRGKGHPEEID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI5</accession>
    <name>A0A087RZI5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transcription initiation factor IIB</fullName>
            <shortName evidence="5">TFIIB</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tfb</name>
        <name evidence="9" type="ORF">AAA799P11_00920</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18889">
        <property type="protein sequence ID" value="KFM18889"/>
        <property type="gene ID" value="AAA799P11_00920"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.883"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00383">
        <property type="entry name" value="TF2B_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023484">
        <property type="entry name" value="TFIIB_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023486">
        <property type="entry name" value="TFIIB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="TF_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00782">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51134">
        <property type="entry name" value="ZF_TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIB-type" evidence="8">
        <location>
            <begin position="20"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="repeat" description="1" evidence="5">
        <location>
            <begin position="136"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="repeat" description="2" evidence="5">
        <location>
            <begin position="230"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="124"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="315" mass="34235" checksum="8E378F3850BDF3AF" modified="2014-10-29" version="1">MDNKGIVEIQVIMLRNQMVTGSKCPACGDKKMITDENTGELFCGKCGFVVSDKIADTGAEWRSFSNDEGNKARTGAGTSLTMHDMGLSTVIGAANKDSTGKPLSASVKSSIERLRTWDSRSQAHSSADRNLRQALNEMDKLKDKLALTDAVIEKAAYIYRKAMEKKLVRGRSIQGLVAACLYASCRNTETPRTLDDVAKGINIRRKDVARCYRLIFRELELKMPVVDPVKGVSRIASIAELSEKSKRKAIAILNEAKKMGVVAGKDPMGIAAAALYLACISTGEVKSQKDISIASGVTEVTIRNRCAGLRKIIND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL7</accession>
    <name>A0A087RZL7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glutamine--fructose-6-phosphate transaminase (isomerizing)</fullName>
            <ecNumber evidence="2">2.6.1.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glmS</name>
        <name evidence="8" type="ORF">AAA799P11_00862</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:13237"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58725"/>
            <dbReference type="ChEBI" id="CHEBI:61527"/>
            <dbReference type="EC" id="2.6.1.16"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.16" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18921">
        <property type="protein sequence ID" value="KFM18921"/>
        <property type="gene ID" value="AAA799P11_00862"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.828"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004360">
        <property type="term" value="F:glutamine-fructose-6-phosphate transaminase (isomerizing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901137">
        <property type="term" value="P:carbohydrate derivative biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05008">
        <property type="entry name" value="SIS_GlmS_GlmD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05009">
        <property type="entry name" value="SIS_GlmS_GlmD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035466">
        <property type="entry name" value="GlmS/AgaS_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035490">
        <property type="entry name" value="GlmS/FrlB_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005855">
        <property type="entry name" value="GlmS_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10937:SF0">
        <property type="entry name" value="PTHR10937:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01135">
        <property type="entry name" value="glmS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="6">
        <location>
            <begin position="2"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="7">
        <location>
            <begin position="277"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="7">
        <location>
            <begin position="439"/>
            <end position="576"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="586" mass="64658" checksum="A75072EBDBFD2C55" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN2</accession>
    <name>A0A087RZN2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00882</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18936">
        <property type="protein sequence ID" value="KFM18936"/>
        <property type="gene ID" value="AAA799P11_00882"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.844"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="115" mass="13345" checksum="9BAD3C609AB62215" modified="2014-10-29" version="1">MDGRMHINVSAVDYDKTSKALTRQLSLLEEMVHSEEDFVMTDSEFAFGWHFFVLSVNKSLIQKLVDMMGPDFEKLKGKGTEKKFLTWLTNNLENKSPRFKLAIKEEMESSKFGIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR5</accession>
    <name>A0A087RZR5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Preprotein translocase subunit SecG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">secG</name>
        <name evidence="10" type="ORF">AAA799P11_00821</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SEC61-beta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18969">
        <property type="protein sequence ID" value="KFM18969"/>
        <property type="gene ID" value="AAA799P11_00821"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.784"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016482">
        <property type="entry name" value="SecG/Sec61-beta/Sbh"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03911">
        <property type="entry name" value="Sec61_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="54" mass="5906" checksum="2FF9F732449AC834" modified="2014-10-29" version="1">MADKKSAPLPASSGGLMRFFEDETKGFKLDPRIVVSIPISLISISWVIDIFLAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT5</accession>
    <name>A0A087RZT5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00841</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18989">
        <property type="protein sequence ID" value="KFM18989"/>
        <property type="gene ID" value="AAA799P11_00841"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.808"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="7919" checksum="F2C067E67CDAF642" modified="2014-10-29" version="1">MPEFTCPECGKRLFHENETTLKIEETIHSKFCRKEGGTHSYMHRDPAHMNSFDPERENDSNGVPVLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT7</accession>
    <name>A0A087RZT7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00843</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18991">
        <property type="protein sequence ID" value="KFM18991"/>
        <property type="gene ID" value="AAA799P11_00843"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="41" mass="4665" checksum="03493354C69D9D78" modified="2014-10-29" version="1">MDESQISSFVMWSVVTGIIMIVTGLSYRAYLRKKNHEISSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU7</accession>
    <name>A0A087RZU7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">AAA799P11_00853</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM19001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19001">
        <property type="protein sequence ID" value="KFM19001"/>
        <property type="gene ID" value="AAA799P11_00853"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.821"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026392">
        <property type="entry name" value="Exo/Archaeosortase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027561">
        <property type="entry name" value="Thauma_sortase"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04178">
        <property type="entry name" value="exo_archaeo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04297">
        <property type="entry name" value="thauma_sortase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="62"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="99"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="236"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="279"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="313" mass="35405" checksum="90B3F3FF882A6885" modified="2014-10-29" version="1">MQNLNLIAGILIIASPILFSMIAYPDSIAWSWNEGRGGYLFALVFVVAELIGLKIVISKKRLLAVIPIALLTIAYLVSLENGLRDYIIESAEQFDVQLIYSWTWMWDFVVMAIFIVVALSIFFGKRWIRIAPAGPIFLTGTAIILSLDAFFPYDTLGPLQYIVPYFVQANVWVITVLDLGTAIARDNVMFLRGDHGSMALQVFWPSAGVHSIIIFSLVIGAFMLKMNIPRARKSMYFVLGIIGTITVNLIRIFSLSWYALKVTTDPVAWEEYHKIAGEIMFLPWLFAFILVVILIESRRLKKQEERDGIKNNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L1</accession>
    <name>A0A087S0L1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sirohydrochlorin cobaltochelatase protein</fullName>
            <ecNumber evidence="3">4.99.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cbiX</name>
        <name evidence="3" type="ORF">AAA799P11_00783</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.99.1.3" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19265">
        <property type="protein sequence ID" value="KFM19265"/>
        <property type="gene ID" value="AAA799P11_00783"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.754"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016852">
        <property type="term" value="F:sirohydrochlorin cobaltochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002762">
        <property type="entry name" value="CbiX-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01903">
        <property type="entry name" value="CbiX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="250" mass="28552" checksum="3CEBC50BB7452BCD" modified="2014-10-29" version="1">MKRGLLIIDRGSKEREASEELETICAGIKAKGDYIFTDYCFLEVEPPYIEDGISKCLKEDIDSLTIVPYFLYPGKKVKIAVTDTMKLQKNTEVKFLITKPMSMHKTLVDIVENRIATTLKENNVTLPNKDVDVMIIGHGSKDPNAQMSLNYIVDELKDSYRNVSRCWLEIEQPDIFEGIKKCEKDEPKVLIIVFYFLHEGAHVKTDINNDLIPALKDSNLKDVFITKHIGTDEKIIDLIIERAKEVEDAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0N0</accession>
    <name>A0A087S0N0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Subtilisin-like serine protease protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00807</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19284">
        <property type="protein sequence ID" value="KFM19284"/>
        <property type="gene ID" value="AAA799P11_00807"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.774"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="351"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="351"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="876" mass="94575" checksum="2F1EBD347352AB5C" modified="2014-10-29" version="1" fragment="single"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S127</accession>
    <name>A0A087S127_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TPR repeat domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00755</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19431">
        <property type="protein sequence ID" value="KFM19431"/>
        <property type="gene ID" value="AAA799P11_00755"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.728"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011716">
        <property type="entry name" value="TPR-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001440">
        <property type="entry name" value="TPR_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013105">
        <property type="entry name" value="TPR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07719">
        <property type="entry name" value="TPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07720">
        <property type="entry name" value="TPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="38"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="106"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="164" mass="18318" checksum="4A1B210E273649A1" modified="2014-10-29" version="1">MNNADRMLAEAYECVEEGDFQDAIHLYDLVLKNEPSNINALIDKGVTLQNMGRIKRAIRTYDKALMISPANIDALLNKGTALHSCQQYKEAMDCYDAVLKIDKKCAMALAYKGLSLGETGKLQDALKHFKKALSIDKEFDLASISKDMAQDLLKSIDDNKIKTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S131</accession>
    <name>A0A087S131_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00759</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19435">
        <property type="protein sequence ID" value="KFM19435"/>
        <property type="gene ID" value="AAA799P11_00759"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.732"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="91" mass="9596" checksum="5BB040425DA35B7A" modified="2014-10-29" version="1">MVLIDKRIFAGGIAMIIAGVIIGVSIGEGPTGHAGMTEEEIIDLMVAEDENQALQLLYGLLIGVGFLLVLISFGARRKKGSATKTEKKPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A6</accession>
    <name>A0A087S1A6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00711</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19510">
        <property type="protein sequence ID" value="KFM19510"/>
        <property type="gene ID" value="AAA799P11_00711"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.681"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="101" mass="10842" checksum="836766A716F049AF" modified="2014-10-29" version="1">MQAMAVPGRMELSSSQKAGLAFGGALVVAGLVLSTLVFPFWNLIREDISEEVEILSNDDGMCYVETSDNIPKIIEDCTLESGDVVTITYGEGLAWATITEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B5</accession>
    <name>A0A087S1B5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Elongation factor 1-alpha</fullName>
            <shortName evidence="5">EF-1-alpha</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Elongation factor Tu</fullName>
            <shortName evidence="5">EF-Tu</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">tuf</name>
        <name evidence="7" type="ORF">AAA799P11_00720</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19519">
        <property type="protein sequence ID" value="KFM19519"/>
        <property type="gene ID" value="AAA799P11_00720"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.691"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00118_A">
        <property type="entry name" value="EF_Tu_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004539">
        <property type="entry name" value="Transl_elong_EF1A_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004160">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03143">
        <property type="entry name" value="GTP_EFTU_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="SSF50465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00483">
        <property type="entry name" value="EF-1_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="4 5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="6">
        <location>
            <begin position="4"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="13"/>
            <end position="20"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="91"/>
            <end position="95"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="153"/>
            <end position="156"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="432" mass="46986" checksum="7E9C9B03F1CB9E5F" modified="2014-10-29" version="1">MADKPHLNLIVTGHIDNGKSTTMGHFLMDLGVVDERTIAAHASESEKTGKGDTFKYAWVMDNIKDERERGITIDLAFQKFESPKYFFTLIDAPGHRDFIKNMITGASEADAAVLVLSAKEGETDTAIAAGGQAREHAFLLKTLGVNQLIVAINKMDDSNYSEEAFKVAKEKGEKLVKSVGYKLENVPFIPVSGWKGDNLVKKSENMPWYNGKTLLEAFDDFTVAEKPTGKPLRVPIQDVYTITGVGTVPVGRVETGTMKAGDKIVVMPSGAPGEIKSIETHHQEMPSAEAGDNIGFNLRGVEKKDIKRGDVLGSPDSPPAVAKEFKAQIIVIHHPTAIAPGYTPVMHAHTAQVAATVTEFLQKINPASGAVEEENPKFLKVGDSAIVKIRPVRPTCIETFQDFPEMGRFALRDMGATIAAGIVKEITEEYKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E1</accession>
    <name>A0A087S1E1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00534</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19545">
        <property type="protein sequence ID" value="KFM19545"/>
        <property type="gene ID" value="AAA799P11_00534"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.515"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043713">
        <property type="entry name" value="DUF5654"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18898">
        <property type="entry name" value="DUF5654"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="13512" checksum="BFCE1E0A31434A7B" modified="2014-10-29" version="1">MADDPEPTSLKHEILDKIAALVAAAFGLVAALAWNEAIKALFREYFGPTDQVGPMIVYAIIVTMIAVILTIFVARAASRAKALLGKRDYRCALCKYKTYVESEFMEHLSKEHSASDDKFISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E2</accession>
    <name>A0A087S1E2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19546">
        <property type="protein sequence ID" value="KFM19546"/>
        <property type="gene ID" value="AAA799P11_00535"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="63" mass="7320" checksum="A1EA5735EE5B54ED" modified="2014-10-29" version="1">MFVIVAILSYHFAASEKIEEKSPQMFWTSISYITCEGGSCEEKGDHRHEYKKKKALRINQILV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H2</accession>
    <name>A0A087S1H2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional regulator LysM protein</fullName>
            <ecNumber evidence="5">2.3.3.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lysM</name>
        <name evidence="5" type="ORF">AAA799P11_00565</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19576">
        <property type="protein sequence ID" value="KFM19576"/>
        <property type="gene ID" value="AAA799P11_00565"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.549"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="139" mass="15222" checksum="5A6157C272EEE78F" modified="2014-10-29" version="1">MYKDNVDEKIIGYLKEDSRESFVDIGKKLKLSESAVRRRVKNLVGNGTIKKFTLELGEENATSAIVLVSVDSATDTSKVSLKLAKLDGVKTVYEITGQYDITTIMSGSSIAEINNSIDALRKIPGVVDTNTVIILRKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J2</accession>
    <name>A0A087S1J2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glutamate dehydrogenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gdhA</name>
        <name evidence="9" type="ORF">AAA799P11_00585</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homohexamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 7">Belongs to the Glu/Leu/Phe/Val dehydrogenases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19596">
        <property type="protein sequence ID" value="KFM19596"/>
        <property type="gene ID" value="AAA799P11_00585"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.569"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016639">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01076">
        <property type="entry name" value="NAD_bind_1_Glu_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006095">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006096">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006097">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014362">
        <property type="entry name" value="Glu_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033922">
        <property type="entry name" value="NAD_bind_Glu_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00208">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02812">
        <property type="entry name" value="ELFV_dehydrog_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000185">
        <property type="entry name" value="Glu_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00082">
        <property type="entry name" value="GLFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00839">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ELFV_dehydrog" evidence="8">
        <location>
            <begin position="191"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="357"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalysis" evidence="6">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000185-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000185-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000185-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="424" mass="46423" checksum="A739E168DA234414" modified="2014-10-29" version="1">MVKNDPFANATKQVNDACDILGIKDKELRNYLATPNKVLRVKIPVKMDNGKIRVFTGFRSQHNNDRGPYKGGIRYFNPEGGVEYMEREVMALSSWMTWKCAIVDIPLGGGKGAIYVNPKTEKLSEGELERLTRGFAYKISEIIGPEKDIPAPDVYTTGKEMTQIMDTFSKLNGNKYSPGVITGKPISMGGSLARNVATGLGAAYTVREAAKTLKINLKGAKVVLQGFGNASTFAGEYLEKMGSKVIAVSDSKGSISIPKGAKVSKILEHKQKKGSVVGFPGSKKISTEELLTTKCDVLVPGALENQIDAKIAKNLKCKIIAEAANGPTLPEADPIIYKKKILVIPDILANSGGVCISYLEWVQNNMGFYWTFDEVANKMEKNITKGFKDAYALSKKHKIDMRKATMVLAVERVLEAFNQKGIWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J3</accession>
    <name>A0A087S1J3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ArsR family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00586</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19597">
        <property type="protein sequence ID" value="KFM19597"/>
        <property type="gene ID" value="AAA799P11_00586"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.570"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="2">
        <location>
            <begin position="43"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="62"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="127" mass="15096" checksum="3D8CEFF8F75EB102" modified="2014-10-29" version="1">MANQLLEFKEIIRSKQVSEHRKPDKQTRKLLFYLFTSTRGGFTRLRIIMSLLEKPYNTHQLSQELELDYKAIQHHMKVLEKNNMVSKIGEKYGAIFHLSNFLEMNISALDEAIDKLDRKMNHKKVYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L0</accession>
    <name>A0A087S1L0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00603</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19614">
        <property type="protein sequence ID" value="KFM19614"/>
        <property type="gene ID" value="AAA799P11_00603"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="49" mass="5870" checksum="9A86A0A8584D33E8" modified="2014-10-29" version="1">MSKIGYKPKWATLHDKRADQFQELYFQKGKKETATDHTDFMKWAYGKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S7</accession>
    <name>A0A087S1S7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19681">
        <property type="protein sequence ID" value="KFM19681"/>
        <property type="gene ID" value="AAA799P11_00675"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.660"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="8005" checksum="DB67789238FD2F48" modified="2014-10-29" version="1">MDKYLTVVLIFMIVTIAIAFFDPTTGDMRFIPHLFYGGIAGIIIIFLYSSYKEKKARQEANAKRRRSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W9</accession>
    <name>A0A087S1W9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00463</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19723">
        <property type="protein sequence ID" value="KFM19723"/>
        <property type="gene ID" value="AAA799P11_00463"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.443"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="219" mass="25129" checksum="B869EFF2E2F8AC7B" modified="2014-10-29" version="1">MDLEKFRNDVYDMTEKLSVNLQEKDIPKLNYVRQQLIEMYQKNLVKINHSILELICASNLISRGYAVDVEKDISEILVCDIFAKKGGGNTIIEIETGFTPPEHAMDTIDYFTARIMSKIARYSQHCSKFSLASPATGLLPIPKIFLLPPNARKKEDVQKVKNLCDRYYKNPPIEYDDILNAHLHSIYLINIDGGFVKELDPHGYVDLTNDLLSRSEIEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X6</accession>
    <name>A0A087S1X6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Oligopeptide transport system permease protein AppC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">appC</name>
        <name evidence="6" type="ORF">AAA799P11_00470</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19730">
        <property type="protein sequence ID" value="KFM19730"/>
        <property type="gene ID" value="AAA799P11_00470"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.453"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="243"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="294"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="368"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="420"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="251"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="455" mass="50187" checksum="A9A3EE8C804AB38A" modified="2014-10-29" version="1">MSSITPQEIKQEFVKSKIGIAGITILGILIAISIIAIIAIPVETFQEWNNPGNWILYPKVAIPIWVNLFMTEKIPEHKILDDPNIQTNSEGEIMLSSHKFGVNFDYGFFPNDFIYVFSSEYSESVLLQMSVTRPDGIKLDLLSTSLPHSNTKTIHSERVFSTDEAIKKNLLLQSKVFDFDLKRLSAEDIVFSKTNANEPLKGNYIFSIDMYSVNSEIKTHESKLIIGGKAFGMMGTDELRRDLAVGLLWGTPLALFIGLVVSIASVIMGLLYGVYAGFKGKKTDEVMMRFNDVIYALPALPFLIILSVTISNSIFVLVGFLMIFGWVGIAKVARSMSLQIKTRGYVDAANMMGQKNSKIVLKHILPQLLPYAFASIAISVPAAITTEAGLSFLGLGDPSFPTWGHILHDANTFGAAARGLWWWIMPPGVMIAIAGLAFVFIGNALDAIVNPKLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y4</accession>
    <name>A0A087S1Y4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00478</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19738">
        <property type="protein sequence ID" value="KFM19738"/>
        <property type="gene ID" value="AAA799P11_00478"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.461"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="58" mass="6666" checksum="4A63453E180D2730" modified="2014-10-29" version="1">MVDEKNEIDKLIDNMITSGDELVDNLKTVLPNSLAESMVMFHESNVENLKKIKEFLNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z4</accession>
    <name>A0A087S1Z4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Thymidylate synthase complementing protein ThyX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00493</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19748">
        <property type="protein sequence ID" value="KFM19748"/>
        <property type="gene ID" value="AAA799P11_00493"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.471"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050797">
        <property type="term" value="F:thymidylate synthase (FAD) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006231">
        <property type="term" value="P:dTMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.170">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003669">
        <property type="entry name" value="Thymidylate_synthase_ThyX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036098">
        <property type="entry name" value="Thymidylate_synthase_ThyX_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34934">
        <property type="entry name" value="PTHR34934"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02511">
        <property type="entry name" value="Thy1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69796">
        <property type="entry name" value="SSF69796"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51331">
        <property type="entry name" value="THYX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="538" mass="63516" checksum="5261A6326D3871D3" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z5</accession>
    <name>A0A087S1Z5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptide methionine sulfoxide reductase MsrB</fullName>
            <ecNumber evidence="2">1.8.4.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Peptide-methionine (R)-S-oxide reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">msrB</name>
        <name evidence="4" type="ORF">AAA799P11_00494</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(R)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24164"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12314"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:45764"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="2">Binds 1 zinc ion per subunit. The zinc ion is important for the structural integrity of the protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MsrB Met sulfoxide reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.12" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19749">
        <property type="protein sequence ID" value="KFM19749"/>
        <property type="gene ID" value="AAA799P11_00494"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.472"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033743">
        <property type="term" value="F:peptide-methionine (R)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01400">
        <property type="entry name" value="MsrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028427">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002579">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10173">
        <property type="entry name" value="PTHR10173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01641">
        <property type="entry name" value="SelR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00357">
        <property type="entry name" value="TIGR00357"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51790">
        <property type="entry name" value="MSRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MsrB" evidence="3">
        <location>
            <begin position="9"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="15454" checksum="803D7647D549674F" modified="2014-10-29" version="1">MSEKIRKTPEEWKEQLTPDQYEICINHGTEPPFSGKYNNTKLEGKFKCTCCGEELFSSDTKFDSGSGWPSFWEPISEDKIEYISDTSYGMVRTEVNCNKCGAHLGHVFDDGPKPTNQRYCINSISLRHEKDDEGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S204</accession>
    <name>A0A087S204_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00503</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19758">
        <property type="protein sequence ID" value="KFM19758"/>
        <property type="gene ID" value="AAA799P11_00503"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.481"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="4"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4707" checksum="82D4B1C79EB7A3B7" modified="2014-10-29" version="1">MDLNELHQKEIDSLRDENIELRKKVQELEAKIKELESKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S215</accession>
    <name>A0A087S215_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Small GTP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00514</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19769">
        <property type="protein sequence ID" value="KFM19769"/>
        <property type="gene ID" value="AAA799P11_00514"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.496"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01896">
        <property type="entry name" value="DRG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045001">
        <property type="entry name" value="DRG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031662">
        <property type="entry name" value="GTP-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006074">
        <property type="entry name" value="GTP1-OBG_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43127">
        <property type="entry name" value="PTHR43127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16897">
        <property type="entry name" value="MMR_HSR1_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00905">
        <property type="entry name" value="GTP1_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="3">
        <location>
            <begin position="64"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="TGS" evidence="4">
        <location>
            <begin position="290"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="369" mass="40946" checksum="267C0864B258AD0D" modified="2014-10-29" version="1">MGIPEKIKAIQDEMARTQINKATEHHLGLLKAKIAKLKREQEDNAAKKSGMKSDGFDVRRTGDATVVFIGLPSVGKSTLLNKLTGAKSAVGAFQFTTLTVVPGMMEYRGAKIQVLDLPGIIKGASTGKGLGKRILSVARTADLVLLVLDVFQPYHEDVLVNELGNIGIRLNQLPPNITIEKAAMGGIAIAQQVKLTKITEKHLKDILHLYGIVSARVVVREDITSEQLSDYIAGNISYSKALTILNKIDLVDEKFLKNLKTKIKSDVIEVSANSDINIDELKEKIYEKLKFIRIYMRPKGGETDFKEPLIAREGDTVEDICNKLHRRMKREFRYGMVWGKSVKFGGQRVGLSHILQDEDVLTIIKTRGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S296</accession>
    <name>A0A087S296_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NifU-like protein</fullName>
            <ecNumber evidence="2">2.8.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nifU</name>
        <name evidence="2" type="ORF">AAA799P11_00379</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19850">
        <property type="protein sequence ID" value="KFM19850"/>
        <property type="gene ID" value="AAA799P11_00379"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.368"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06664">
        <property type="entry name" value="IscU_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002871">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10093">
        <property type="entry name" value="PTHR10093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01592">
        <property type="entry name" value="NifU_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NifU_N" evidence="1">
        <location>
            <begin position="8"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="147" mass="16493" checksum="17E7D1A19FDFF0FC" modified="2014-10-29" version="1">MSSNADIYHEMIVDYSRNPVNYGKIEDHDVTFHDSNPLCGDSIDIDMKIDDNKVTDIKFHGKGCAICMACSSVLTEITKGKSIEDVRKIEKNDVLSELGLEHLQAVRIKCALLSLKVLKSALYTYIGKHLENSEDVDKLKEEAANLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A2</accession>
    <name>A0A087S2A2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19856">
        <property type="protein sequence ID" value="KFM19856"/>
        <property type="gene ID" value="AAA799P11_00385"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.374"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="201" mass="22061" checksum="A1FED62CAC2EF923" modified="2014-10-29" version="1">MKKRGPIIAISGIILVVISLSIAASAIPTNVTGPGDFFVSSLFEDMFDEISDEIQIMPNDSAHFSYTTYSSDVPILWGIQILDYQAGDELSITISNIFGDDYGTFIQDEPILFEVLQISQSDTLNLEIKNLGVNDVTIITMFSEDPENSEAFTNPDSPVMNMVVPLMVSGILLVLGITVSIIGVIVILVDLKNNYDNKRNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A6</accession>
    <name>A0A087S2A6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00394</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19860">
        <property type="protein sequence ID" value="KFM19860"/>
        <property type="gene ID" value="AAA799P11_00394"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.379"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="12595" checksum="2C80F156A6C316CA" modified="2014-10-29" version="1">MRNDERYEIQRAFDLLPHVIGASWASVEFRMKGIKKPTREEFREKTLEYLKMAEPVFEAYPKDEEFDAIRKYIDFRKNEEYEKIIAGLNKEIEKRYDRYVDYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B1</accession>
    <name>A0A087S2B1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Galactose-1-phosphate uridylyltransferase protein</fullName>
            <ecNumber evidence="1">2.7.7.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">galT</name>
        <name evidence="1" type="ORF">AAA799P11_00399</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.12" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19865">
        <property type="protein sequence ID" value="KFM19865"/>
        <property type="gene ID" value="AAA799P11_00399"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.384"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008108">
        <property type="term" value="F:UDP-glucose:hexose-1-phosphate uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="112" mass="13152" checksum="4956463D57F209F2" modified="2014-10-29" version="1">MDFPIDSQKTLEVIERMKLAKIGEYKKWEAIIKKIKNDVPLNQGELEYYTNLTRIYKDSAITSRSKIYHTKLSEHDEKPPCNECGENSAFYCNMNDQYFCTIHVVGHDENEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C5</accession>
    <name>A0A087S2C5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulatory protein AsnC</fullName>
            <ecNumber evidence="2">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">asnC</name>
        <name evidence="2" type="ORF">AAA799P11_00413</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19879">
        <property type="protein sequence ID" value="KFM19879"/>
        <property type="gene ID" value="AAA799P11_00413"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.398"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="1">
        <location>
            <begin position="9"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="166" mass="19105" checksum="B00E38053CFE9F81" modified="2014-10-29" version="1">MSEDAWSNLDKVDQKIIEILNNNARTPSKEIATELEKSGHDVSDRTIRKRIERLEKSGIIKGYKAVLTDVSGINKYQSVMMKLKPSKSLEAVRDSITDFVKKLDNYVLVANMEGEWNMQVIVQIESEKDNTSEKIVEKFSEELIDYRINEIDIRDVNILNMSLLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D2</accession>
    <name>A0A087S2D2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Signal recognition particle 54 kDa protein</fullName>
            <shortName evidence="8">SRP54</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">srp54</name>
        <name evidence="12" type="ORF">AAA799P11_00425</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. Archaeal SRP consists of a 7S RNA molecule of 300 nucleotides and two protein subunits: SRP54 and SRP19.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="8">The SRP-RNC complex is targeted to the cytoplasmic membrane.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the GTP-binding SRP family. SRP54 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19886">
        <property type="protein sequence ID" value="KFM19886"/>
        <property type="gene ID" value="AAA799P11_00425"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.405"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048500">
        <property type="term" value="C:signal recognition particle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008312">
        <property type="term" value="F:7S RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00306">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036891">
        <property type="entry name" value="Signal_recog_part_SRP54_M_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004125">
        <property type="entry name" value="Signal_recog_particle_SRP54_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036225">
        <property type="entry name" value="SRP/SRP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022941">
        <property type="entry name" value="SRP54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
        <property type="entry name" value="SRP54_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564">
        <property type="entry name" value="PTHR11564"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02978">
        <property type="entry name" value="SRP_SPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47364">
        <property type="entry name" value="SSF47364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47446">
        <property type="entry name" value="SSF47446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0733">Signal recognition particle</keyword>
    <feature type="domain" description="SRP54_N" evidence="11">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="9">
        <location>
            <begin position="98"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="domain" description="SRP54" evidence="10">
        <location>
            <begin position="99"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="106"/>
            <end position="113"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="188"/>
            <end position="192"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="246"/>
            <end position="249"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM19886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="442" mass="48734" checksum="FDE48496037B1E79" modified="2014-10-29" version="1">MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERALNETPPPGLSRKDHIVKILYDELSNLLGNESEFDFKPGKQNKIILLGIQGSGKTTVASKLAKFLTRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKSGLKYFEDQPLDVILIDTAGRHKEEQDLLEEMDRINKVADPDLALLVIDGTIGQQCFNQAEAFHKTIPVGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDVQAVLDLAKRLESESDDDRMKRISSGKMNMEDFLSQLEEVTKMGSLQGILESMPGLSGMVKDDQVNQMEDRVTKWRYIIQSMTTQEKADPEGLLNSSRIKRIARGSGWPEGEVKELIKNYKNSKNMMKASKGRQMQGTLRRMGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D4</accession>
    <name>A0A087S2D4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00427</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19888">
        <property type="protein sequence ID" value="KFM19888"/>
        <property type="gene ID" value="AAA799P11_00427"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="32" mass="3750" checksum="61A9BB7352F6F577" modified="2014-10-29" version="1">MPIRKKGKHQRRADQSAKRRRIKHAKAGKPKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D9</accession>
    <name>A0A087S2D9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">23-bisphosphoglycerate-independent phosphoglycerate mutase protein</fullName>
            <ecNumber evidence="6">5.4.2.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">apgM</name>
        <name evidence="6" type="ORF">AAA799P11_00432</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.12" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19893">
        <property type="protein sequence ID" value="KFM19893"/>
        <property type="gene ID" value="AAA799P11_00432"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.411"/>
    <dbReference type="UniPathway" id="UPA00315">
        <property type="reaction ID" value="UER00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046537">
        <property type="term" value="F:2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16011">
        <property type="entry name" value="iPGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006124">
        <property type="entry name" value="Metalloenzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004456">
        <property type="entry name" value="Pglycerate_mutase_ApgM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042253">
        <property type="entry name" value="Pglycerate_mutase_ApgM_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31209">
        <property type="entry name" value="PTHR31209"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01676">
        <property type="entry name" value="Metalloenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10143">
        <property type="entry name" value="PhosphMutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006392">
        <property type="entry name" value="IPGAM_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00306">
        <property type="entry name" value="apgM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metalloenzyme" evidence="5">
        <location>
            <begin position="9"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="428" mass="46687" checksum="DD99C8F3799EC227" modified="2014-10-29" version="1">MDNSDVHMIYVLLDGVGDLPHPDLDGKTPLEAANTPILDKIASNGAIGEVISVGKGIAPESDIAVFNMLGYKFKHEDYAGRGVIEAIGIGIDFKDGDLALRGNYSTLDDQEVIIDRRAGRHIEKEDADGIAKEIEEKIKFSNPDTSVVVAPTIGHRVTVRIRNNSKKLSSKITNTDPAYSNIGGMGVAKAVGDFLKIEKCLPLEDVEDSKLTANIVNEFSKQTINICKESQINKKREEQGKKKLSCILLRDAGNKYPDVIPINEKYGMNFSCIVDMPVELGISEVLKMKAFEAGGLTDYEEKARVAAKAMETQNSIYVHLKGPDEFGHDGDAIGKMKNIEEIDQRFFKTLVENIDTNKVAIVISADHSTPCINKGHSDDPVPVLVSGDFIKKDGTTRMTEDQAKKGSIGLLQGADVVTKSLELIKSQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L1</accession>
    <name>A0A087S2L1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00269</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19965">
        <property type="protein sequence ID" value="KFM19965"/>
        <property type="gene ID" value="AAA799P11_00269"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4128" checksum="2C3A2FE6E8F79E65" modified="2014-10-29" version="1">MGMKTNLFILVPLAAFAAIIIGSGMYMTLCKNALVPLPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L4</accession>
    <name>A0A087S2L4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thiol-disulfide oxidoreductase ResA protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">resA</name>
        <name evidence="3" type="ORF">AAA799P11_00272</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19968">
        <property type="protein sequence ID" value="KFM19968"/>
        <property type="gene ID" value="AAA799P11_00272"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.266"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016209">
        <property type="term" value="F:antioxidant activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041017">
        <property type="entry name" value="Thioredoxin_10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17991">
        <property type="entry name" value="Thioredoxin_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="23"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="365" mass="41380" checksum="4BBAA112390B803F" modified="2014-10-29" version="1">MKSEIKTAIILAVVIGVGIVAISVAFSTLDQASVANISGDSSQIDKSGFKKAPDLVGIAHYLNTTPEELAQEMEGKVILYDIWTYSCINCIRTLPYITAWDDKYSDQGLLIIGIHSPEFEFEKVPENVKMSIEKHGINYPVVMDNEMETWKAFENRYWPRKYIADHEGYIRYDHIGEGGYQETEKVIQQLIKERSDALGIQMASASSLVDIKEFEHTLFRTPELYFGYYFAQNRNQLGSEEGFQPEKTVVYEESDKIELHKFYPIGTWKNHEDSMELISETGEIKLLYNAKEVNIVTANNAELEMYLDGEPLPEQYSGSDITSENTLSVSEPGLYNIITSEESASHVLEIKVKGMGFQIFTFTFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P8</accession>
    <name>A0A087S2P8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">510-methylenetetrahydromethanopterin reductase protein</fullName>
            <ecNumber evidence="2">1.5.98.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mer</name>
        <name evidence="2" type="ORF">AAA799P11_00306</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.98.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20002">
        <property type="protein sequence ID" value="KFM20002"/>
        <property type="gene ID" value="AAA799P11_00306"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.300"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018537">
        <property type="term" value="F:coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="320" mass="36017" checksum="CE02708DB948B770" modified="2014-10-29" version="1">MRIACSLGSMLSVNEVLNCAEKISKTQTDTIWVPETWGMENFSMLSAVSGRTSAQKIGSSIINIYSRSPAAIAMGAVTIDTISNGRVILGLGTSSLPIVETFHGYKFEKPLQRMKEYVEIIKLITSGKPINYSGNFFNLKNFKLLIKPLRESIPIYIAAINQKMVELTWEIGDGIIFYLRPKNEMKETIQKMQTKRKIDVTCQIITCVSENPDEAVERAKKTLAFYISVGRIYREFLARNGFEKETTNIFEEFKKSGFTSNHELVSDSMLKELTICGAPEDCKKQLDAFVHTGIDLPIIQFNPVGDTMTSFEVLQKTFLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q3</accession>
    <name>A0A087S2Q3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ORC1-type DNA replication protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cdc6</name>
        <name evidence="3" type="ORF">AAA799P11_00312</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20007">
        <property type="protein sequence ID" value="KFM20007"/>
        <property type="gene ID" value="AAA799P11_00312"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.305"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="224"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="57"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="251" mass="27966" checksum="D605BF66F679E570" modified="2014-10-29" version="1">MNKKSLKRRVSDVQKQNSLFSDKSYLDNLSIPSDIIGRESQTRKLVEHLLGFQKGLVVPMVSVYGRSGSGKSSLVKFVCNNLDDTQTCFVDLRKAKTVFGCANLILSELGAPEIKSAVGLNGAIKAIESAVFSQLKSGLFVLCLDEFDSLFFDKRGKPSDFIYKLILLIEKLRSKNLHMCIITISNKILSDFDLDDRVLSRIGTSEIFFDSFSRVTFSSSSFRILTCSLLFFSSSVSSLVLSTCIVWFCLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S2</accession>
    <name>A0A087S2S2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00331</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20026">
        <property type="protein sequence ID" value="KFM20026"/>
        <property type="gene ID" value="AAA799P11_00331"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="51" mass="6212" checksum="4999B8259A763BF8" modified="2014-10-29" version="1">MKTMPKRIEYLRKEQIEIEIEILEMVFTFTQTTYKRTNVQTLNYKPSAISR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S4</accession>
    <name>A0A087S2S4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative lactoylglutathione lyase protein</fullName>
            <ecNumber evidence="2">4.4.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gloA</name>
        <name evidence="2" type="ORF">AAA799P11_00333</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.5" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20028">
        <property type="protein sequence ID" value="KFM20028"/>
        <property type="gene ID" value="AAA799P11_00333"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.327"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004462">
        <property type="term" value="F:lactoylglutathione lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025870">
        <property type="entry name" value="Glyoxalase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12681">
        <property type="entry name" value="Glyoxalase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="5"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="136" mass="14819" checksum="CDFE84D0CA4A0A38" modified="2014-10-29" version="1">MNIKKVGNVILAVKDLDKSIKFYNEIIGLPIKNQRRTWVDLGTSGALLSLHPASLTEQHGNALESGITIGFLVGDVKSAVEELREKGVKIHRDIVEKDAGKNAVISDPDDYLISLFEPSFSDKAEQTGGYHGFTPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U3</accession>
    <name>A0A087S2U3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B</fullName>
            <shortName evidence="8">Asp/Glu-ADT subunit B</shortName>
            <ecNumber evidence="8">6.3.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">gatB</name>
        <name evidence="10" type="ORF">AAA799P11_00357</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + H2O + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + 2 H(+) + L-asparaginyl-tRNA(Asn) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14513"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="Rhea" id="RHEA-COMP:9677"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the GatB/GatE family. GatB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20047">
        <property type="protein sequence ID" value="KFM20047"/>
        <property type="gene ID" value="AAA799P11_00357"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.346"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050566">
        <property type="term" value="F:asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00121">
        <property type="entry name" value="GatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004413">
        <property type="entry name" value="Apn/Gln-ADT_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017959">
        <property type="entry name" value="Asn/Gln-tRNA_amidoTrfase_suB/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006075">
        <property type="entry name" value="Asn/Gln-tRNA_Trfase_suB/E_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018027">
        <property type="entry name" value="Asn/Gln_amidotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042114">
        <property type="entry name" value="GatB_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017958">
        <property type="entry name" value="Gln-tRNA_amidoTrfase_suB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659">
        <property type="entry name" value="PTHR11659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02934">
        <property type="entry name" value="GatB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02637">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00845">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00133">
        <property type="entry name" value="gatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01234">
        <property type="entry name" value="GATB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GatB_Yqey" evidence="9">
        <location>
            <begin position="282"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM20047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="426" mass="47963" checksum="D0E1BEE329194768" modified="2014-10-29" version="1">MGLPGSLPRLNQEAVKKATMIAMALNCSTPEKIAFFRKNYFYPDLPKNFQITQLNIYGDTSVGGSGSIMVGDKKIRITRIQLEEDPGRLIYEGSSSKNQITLVDYNRAGTPLVEIVTEPDFENPKQVREFLNILSDLLENLGVSDPSLEGAMRADANVSIEGGKKVEIKNIGSFHDLEKAVHFEITRQESLHSRDIEIVQETRHWDDKRKITISSRSKEEELDYRYFLEGDIPWIRIDPAIKEKLKSEMPESISSKKERYVSKYNIPNQVADVLSSDKFYSDLFEDSHTESNAKEIANIITTDLMGLVDTREKRESSKITANHLRDLADAIQTGKISRTSAKNALYEIVKTGKELSHVISDLDLGNVSDESELLTIVKDVISEEPQAVEQAKSNPQTINYLVGKVMQKTKGKADPKLTLDLLKKQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U5</accession>
    <name>A0A087S2U5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00359</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20049">
        <property type="protein sequence ID" value="KFM20049"/>
        <property type="gene ID" value="AAA799P11_00359"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.348"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006450">
        <property type="term" value="P:regulation of translational fidelity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036113">
        <property type="entry name" value="Asp/Glu-ADT_sf_sub_c"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141000">
        <property type="entry name" value="SSF141000"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="88" mass="10343" checksum="4155343BCB904A2E" modified="2014-10-29" version="1">MVTEEEIEQVTKLMKIDVHDHKEFIDKVHAMIDYFDILDSAGVSDEEISMNDVSLSELREDEHIEYSDNLIERLNHYKGTYVRAPKMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X3</accession>
    <name>A0A087S2X3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Radical SAM domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00148</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20077">
        <property type="protein sequence ID" value="KFM20077"/>
        <property type="gene ID" value="AAA799P11_00148"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13186">
        <property type="entry name" value="SPASM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SPASM" evidence="1">
        <location>
            <begin position="211"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="353" mass="40673" checksum="2A40CE3F7C31229A" modified="2014-10-29" version="1">MNNSVDITTNIGCRVQCKFCPQDVSMSNYASKNNFKKIEFGKPILMSYQTFVTILKKIPKNVLIRFSGFSEPFLNPECIKMIKHASDNGYQIQLYSTLVGMTINDIDILTTIKLQKFVIHLADNEKYAKIPLALHKEILKKIVASHIENIFFMTMGTLPDEIKKIIGMDVKASEMVDWAGNIDFGRKTDRITGPILCTMNRSKNNRDIPPIILPNGDTVLCCKDWKMDYVLGNLCNCEYDELFRSKTYHEVLKKMRSENDDILCRNCEFALSINKEKNLKQQYADLGINPSDEIGTKLDELYQYYLMRPIDPEGLIFFYIKIKNNDLTYDDIEKQILQSSEYASIPKKIISNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z9</accession>
    <name>A0A087S2Z9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pseudaminic acid synthase protein</fullName>
            <ecNumber evidence="2">2.5.1.56</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00174</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.56" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20103">
        <property type="protein sequence ID" value="KFM20103"/>
        <property type="gene ID" value="AAA799P11_00174"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.173"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050462">
        <property type="term" value="F:N-acetylneuraminate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016051">
        <property type="term" value="P:carbohydrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013132">
        <property type="entry name" value="Neu5Ac_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03102">
        <property type="entry name" value="NeuB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NeuB" evidence="1">
        <location>
            <begin position="22"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="277" mass="31565" checksum="F0C03108D3181094" modified="2014-10-29" version="1">MVFIVAEIGINHNGSMEIAKKLIDIASSAGCDAVKFQKRDIEKVYSKKVLDSPRDSPWGTTTREQKLGLEFSEKQYGEIDRYCKKKKISWYLSCWDVGSQIKMRKFKTKYNKVASAMLLHTKLLETIAEEKKHTFISTGMSTLKDISNAIKIFKDYECPFELMHSHSAYPMPIEEANLKVIQTLQKKFKCDVGYSGHESGSYLVCLAAVMLGATSIERHITLDRTLYGSDQAASLEPEGLFRMVRDIRDLDTILGDGKKRIWDSELPAQKKLREIFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S312</accession>
    <name>A0A087S312_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Capsule polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00187</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20116">
        <property type="protein sequence ID" value="KFM20116"/>
        <property type="gene ID" value="AAA799P11_00187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015774">
        <property type="term" value="P:polysaccharide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007833">
        <property type="entry name" value="Capsule_polysaccharide_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05159">
        <property type="entry name" value="Capsule_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="510" mass="60810" checksum="28AF714B03F0E4B0" modified="2014-10-29" version="1">MSDRILVWVDLILIQFAISKFLQNMHDCELFAIYDFNHHIKKSFLNQKIVNFKKEWFYWDHVLDVNVKPDINYLKSFEEKYKIDLWLIAINDRVFYQYNQFYKFTKNEILSILEQECRFFEKVLNEANPDFLIIKVTDSHRSHLLEQMCRSKGIKILMLETSRLGYRSVVSEEANEIDYLESMQTTNTQITFSELRDNLKKFDRYEQAKSLSTGGFNFSKWEKFKASYNWMIKTFDKEYRMGYDHFGLTRFNAITDRFSAALKRSWRTRYIDRNLERKIANEKFVYFPLSVEPERTLSISAPFYTNQLEIINNIARSLPVDYKLYIKEHMAMKYRHWRPISFYKKIMNLPNVTLIHPSLSNKELLYNCSMVCTITGTAGLEAAYYGKPSIIFGHTSYDSLPSVHRIKNLEDLPTLIRNCLDEKVNPSDVFNLVKIIENISFDLNLIELYNKISNSFHSGGFLISNNIEMEFLDSFIEQNNVIFEMLAKEHIKKIEQHKRFKKQKFNHNNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S314</accession>
    <name>A0A087S314_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4214 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00189</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20118">
        <property type="protein sequence ID" value="KFM20118"/>
        <property type="gene ID" value="AAA799P11_00189"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3130.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025282">
        <property type="entry name" value="DUF4214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038255">
        <property type="entry name" value="PBS_linker_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13946">
        <property type="entry name" value="DUF4214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4214" evidence="2">
        <location>
            <begin position="196"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="332" mass="37926" checksum="8E6B24EB7972E426" modified="2014-10-29" version="1">MDYENNYDKMKQMGKTGKIKVIVYVVLAILIGSTITYLDISKTDRSDVPDNLYPERKVEKITFINKFDIDKEKIFDSIANVSTYPYVLPNNVISVNILEQSENQIVAEETFIELGIKVTLTVKHTVLPYDQHIIEIIEGDASGTKITLTFEEENNFTKITTDADLDLKGLLSPFGFLPKGNMGSAVNTVLSSFVEYSQRYDNESKIIDDLYREILHRPVDLEGLQYFSALLNEGKITVDEIREELKNSDEFKNQLLPDEIMTLDELSENSKKQVNDLYLEILGRDADIEGLQHFGSLIEIGKMTPEELRNALLNSDEYKWQKGELAINEMKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S323</accession>
    <name>A0A087S323_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycoprotein 3-alpha-L-fucosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.214</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00198</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.214" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20127">
        <property type="protein sequence ID" value="KFM20127"/>
        <property type="gene ID" value="AAA799P11_00198"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.197"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018392">
        <property type="term" value="F:glycoprotein 3-alpha-L-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="7"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="292" mass="34043" checksum="D9335A7FD38E6422" modified="2014-10-29" version="1">MFSELVSVVIPVYNSEKYLEECLNSVLDQTYDNIEIIVIDDGSTDSSPDILKKYSDRVNVISQKNNGLASALNLGISKMKGHWFKWFSPDDVMYPYAIQTLVDEAKNHSSNTILYSNWEIINENGKKLRTFQESNYNELSGFEYNVRLLDGQLINVNTTLIPSYLIKKNLIQDLDDPVVIDYELFLCCALLHHTTFYLISKPLIKYRIHSDQLSHKNITKTMDYISKIKNDILMQLNDSMKIKYIHDLEKYQKTKPPKQKTMEFGMKLLSSVPSWVSDRILIFYLNKIRQNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S326</accession>
    <name>A0A087S326_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00201</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20130">
        <property type="protein sequence ID" value="KFM20130"/>
        <property type="gene ID" value="AAA799P11_00201"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="148" mass="16751" checksum="AD5FB26F3833C633" modified="2014-10-29" version="1">MLRKFFFFAIFLIIFVTPESFAQYRDFENSINNEKIYMFVQIQVRDSGGNLVGYIETDRVVITDFEKLSENLNNIPQESDKRKTMTIDGQEFEIITGEGLARHQSETVVSLSAISGESGVLAFANHDGYPVKVGDEALSTWTIVRPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S330</accession>
    <name>A0A087S330_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphoribosyl-AMP cyclohydrolase</fullName>
            <shortName evidence="7">PRA-CH</shortName>
            <ecNumber evidence="7">3.5.4.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">hisI</name>
        <name evidence="9" type="ORF">AAA799P11_00205</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>1-(5-phospho-beta-D-ribosyl)-5'-AMP + H2O = 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:20049"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58435"/>
            <dbReference type="ChEBI" id="CHEBI:59457"/>
            <dbReference type="EC" id="3.5.4.19"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="7">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 3/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the PRA-CH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.19" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20134">
        <property type="protein sequence ID" value="KFM20134"/>
        <property type="gene ID" value="AAA799P11_00205"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.204"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004635">
        <property type="term" value="F:phosphoribosyl-AMP cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01021">
        <property type="entry name" value="HisI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026660">
        <property type="entry name" value="PRA-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002496">
        <property type="entry name" value="PRib_AMP_CycHydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038019">
        <property type="entry name" value="PRib_AMP_CycHydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01502">
        <property type="entry name" value="PRA-CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141734">
        <property type="entry name" value="SSF141734"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="5 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PRA-CH" evidence="8">
        <location>
            <begin position="32"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="108" mass="12126" checksum="D31F5493BB46FCAC" modified="2014-10-29" version="1">MNKTIDDIDFEKSGGLVPVIVQDANTKDVLTLAYSNKESLELAKKTGKSWFYSRSRNKLWMKGEESGNTQEIREILVDCDSDAIIYLVEPSGPACHTGENVCFHNELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S347</accession>
    <name>A0A087S347_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00227</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20151">
        <property type="protein sequence ID" value="KFM20151"/>
        <property type="gene ID" value="AAA799P11_00227"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.221"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="146" mass="16594" checksum="681C936897133249" modified="2014-10-29" version="1">MTCKGICVRYKAQKPVGTGRYASGQRRCQICEIFIKWEGLWCPCCGYRLRTKPRNLKYKAKLRARVEADSIEAKSAEVQPEVEEIAVKAKSKAKTAKSKTTKSKEKTPCKYCEKLFVYPDKHEKNCKKNPTLVDASQENESIAIKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S352</accession>
    <name>A0A087S352_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphate-specific transport system accessory protein PhoU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">phoU</name>
        <name evidence="3" type="ORF">AAA799P11_00232</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20156">
        <property type="protein sequence ID" value="KFM20156"/>
        <property type="gene ID" value="AAA799P11_00232"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.226"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030643">
        <property type="term" value="P:cellular phosphate ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045936">
        <property type="term" value="P:negative regulation of phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.220">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028366">
        <property type="entry name" value="P_transport_PhoU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038078">
        <property type="entry name" value="PhoU-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026022">
        <property type="entry name" value="PhoU_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42930">
        <property type="entry name" value="PTHR42930"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01895">
        <property type="entry name" value="PhoU"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="2">
        <location>
            <begin position="12"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="271"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="348" mass="40066" checksum="9E0DF9A49E4086D0" modified="2014-10-29" version="1">MEEREETRKIQFTGKSSYIVSLPKQWIMDLGLKQGDQIRMVRKGSSTLELYPPKFESRSQKKEEAIIEINSEEKASSIVRKLISLYFLGFKTINVKPKDGRLSPIQRNTVKEAVKRMLMGSEIISDSSSGITVQVLVNLLELSVDGAFKRMIHLAKSMSSDAILAVKENNMDLAQEVINTDDEVDRFGFYIIRQLKIAIQNEHMLKEMGFRNPRNCLGYRLVVKNIERTGDHAAFIAKDLLEFKKSVKKEILQKLQDMNEFCLSALDDACLALFKEDYSQAEKTIEKTNEITKYEKKVREASKSLKDDEEVYRVRRMTENIRRISEYASDIAEIVLNMNIEKAIKKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S369</accession>
    <name>A0A087S369_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00249</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20173">
        <property type="protein sequence ID" value="KFM20173"/>
        <property type="gene ID" value="AAA799P11_00249"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.243"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="203" mass="23351" checksum="ADAF65B408A53AA9" modified="2014-10-29" version="1">MAGLDKLISISLPKKIKKKIDAYTLKKIERELFLEHGMSIKLATEHFQTLLKIIKKNSELDVNQFENECLKEIIQVKKVRENYHLTILDTKLVHFILDIFGDGETRKMIISILKSEHTIPEILRESGVPKTSGYRKIKNLLINGFFIETGKVLSESKKISKIQCVFQEIVIDAKKEKLIVSGIVPKKIFEKSTTMKSIIKNLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S374</accession>
    <name>A0A087S374_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YaaC-like Protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00254</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20178">
        <property type="protein sequence ID" value="KFM20178"/>
        <property type="gene ID" value="AAA799P11_00254"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="288" mass="33620" checksum="740B8EFCD059659E" modified="2014-10-29" version="1">MINDRVFFAESLLIPSSYRAIFKTIHRNLSSPNYPVICNTYKQKIEQKFHIDVPQIKDYSEYATSDFLRNVIFLKQAHNFGKLALNAIPEVKPLLLYYAENQLQAFFVYSIFHFKDNSFGHGLSISGNSYENIGVKIKEKGFFQRIVNAYTILGSSWIFSPLELTGGNGLQERDDPYSFVTTPTLRLKELIEIKNHAKPHPNGYILDQTDYLFLFLASFLARYKPDIWHEIVGGEKGDEFAYFKQSFTRFSLVWDRLIHMLFSIYHNTTPPPLSTPDYEMKQYQYQIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S388</accession>
    <name>A0A087S388_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00268</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20192">
        <property type="protein sequence ID" value="KFM20192"/>
        <property type="gene ID" value="AAA799P11_00268"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.262"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="49" mass="5396" checksum="1E9944C52A02C0C3" modified="2014-10-29" version="1">MITSLSLLNYVDMDSEQSVLGYGISLIVLNGMMYVGIPMFAIVIGKKRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F8</accession>
    <name>A0A087S3F8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00009</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20262">
        <property type="protein sequence ID" value="KFM20262"/>
        <property type="gene ID" value="AAA799P11_00009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="14449" checksum="BA17302DE63471FE" modified="2014-10-29" version="1">MMNATHIFTRKSNLFTIVLAAVIGLLATPVIIPHVLHGYHMIHIGIHIAGITLSVFLSILAIIAYKNLRTNKMLFTLISFLVFVAAEIVTLVDATWPTMYDLEYMTLSEVGHILILITLGMLSLGVFRND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G2</accession>
    <name>A0A087S3G2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Copper-containing nitrite reductase</fullName>
            <ecNumber evidence="4">1.7.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nirK</name>
        <name evidence="9" type="ORF">AAA799P11_00013</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Fe(III)-[cytochrome c] + H2O + nitric oxide = Fe(II)-[cytochrome c] + 2 H(+) + nitrite</text>
            <dbReference type="Rhea" id="RHEA:15233"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16301"/>
            <dbReference type="ChEBI" id="CHEBI:16480"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="1.7.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Cu(+)</name>
            <dbReference type="ChEBI" id="CHEBI:49552"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Cu(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29036"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotrimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20266">
        <property type="protein sequence ID" value="KFM20266"/>
        <property type="gene ID" value="AAA799P11_00013"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.13"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050421">
        <property type="term" value="F:nitrite reductase (NO-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001287">
        <property type="entry name" value="NO2-reductase_Cu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00695">
        <property type="entry name" value="CUNO2RDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="8">
        <location>
            <begin position="92"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="281" mass="30514" checksum="AF547CBC7213A855" modified="2014-10-29" version="1">MRKQYGYILSIATVAVVGMSLLGSTFTQTQIAGQSFDASKLETSALEAIHQMGGLQLVMPEAFAETDCGTLSNSGREVVEFNVTGESVELPIMGGKTYNAMTFDQQVPGPTLRVTQGDVVKMTLTIPDDEVTAHGNDMHASQISAAAFESINPGESKTYCYVAEVPGVFKYHCSGVKLIGMDQHVLSGMYGIAIVDPIDGYKKLMVEKTAVENGKVVKDRQFYDADALEFQLQYNQLYLTPEGNYDAGAMFKHHNTATVVNGMQFGYVPNEVHNALIKGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G8</accession>
    <name>A0A087S3G8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-acetylneuraminate epimerase 1 protein</fullName>
            <ecNumber evidence="2">5.1.3.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nanM1</name>
        <name evidence="2" type="ORF">AAA799P11_00019</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.24" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20272">
        <property type="protein sequence ID" value="KFM20272"/>
        <property type="gene ID" value="AAA799P11_00019"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.19"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.80">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011043">
        <property type="entry name" value="Gal_Oxase/kelch_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015915">
        <property type="entry name" value="Kelch-typ_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006652">
        <property type="entry name" value="Kelch_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01344">
        <property type="entry name" value="Kelch_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00612">
        <property type="entry name" value="Kelch"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50965">
        <property type="entry name" value="SSF50965"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="313"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="344" mass="38186" checksum="A088DE0D57AACB61" modified="2014-10-29" version="1">MKSLAVILILIFSFGMPFVFAQEPSEGWERLSDMPEPRSESKAVGYDDKIYVIGGLNNNGLAEHSMFVYDVKEDSWRVGTSMPTALHHSGAAIYDGKLYVVGGYYDQWQPSNELLIYDIKSNVWSKGTNMPTSRGALTAEFLDGKLYAIGGFNKETRSENEVYDPQTDSWDTKSNLPTPREHLASSVLDEQMYVIGGRSGQDNVDATEVYDYATDSWKSLEPLPTARSGLAASTMNQVIFVFGGEGYAGTFDENEAYIPDEGWFSQQPMPIPRHGLDAVTIDKNIYLIGGGIAPGASYSPITEKYHNTIIPEFGIFAGLIFTISVIMMVLLTKSRLKFIYKNSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G9</accession>
    <name>A0A087S3G9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Plastocyanin protein</fullName>
            <ecNumber evidence="2">1.7.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20273">
        <property type="protein sequence ID" value="KFM20273"/>
        <property type="gene ID" value="AAA799P11_00020"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.20"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050421">
        <property type="term" value="F:nitrite reductase (NO-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Copper-bind" evidence="1">
        <location>
            <begin position="91"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="167" mass="18552" checksum="B64ACEFE0AA24122" modified="2014-10-29" version="1">MNYLIFALIPIVLFIGGTSAFAESVPEWVKNTALWYGEGIISEGEFINMIKFLIENKVIVIDSVMEPVPQAVNAQVVIPNGNFDVTGAGFYSPLNLEISVGTIVTWVNDDSVPHNIQSIDTNGKVIQLFNSPPLNTGDRFEFAFDEKGVYNYYCSFHPWRVGLVTVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I2</accession>
    <name>A0A087S3I2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00033</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20286">
        <property type="protein sequence ID" value="KFM20286"/>
        <property type="gene ID" value="AAA799P11_00033"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.33"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="229" mass="26579" checksum="A86643084825F9BF" modified="2014-10-29" version="1">MKKKKIQNITIGIIAISIIGAIAAYNYSVDQTKQKGLQFGVELEQIQQEVKDLQIKFYSEKTKWEEGDITKEELLKFYDEHLNEFNEIISKYDELDSPELFESSVELLKLSSETQLSSDSEYIKWIETGDESDKVRSDTQFQESVEYELQGLVEFYSAKTGIKNYDEDVKFEAPQTGLTQKVIQVAENMASKCDEEFKNDSGEFDSDEIEVEWFNCINEAKKWKIEHLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K4</accession>
    <name>A0A087S3K4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cadmium cobalt protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">czcD</name>
        <name evidence="6" type="ORF">AAA799P11_00055</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20308">
        <property type="protein sequence ID" value="KFM20308"/>
        <property type="gene ID" value="AAA799P11_00055"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.53"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="152"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="22338" checksum="529CF5908CFF4C37" modified="2014-10-29" version="1">MPDDDDLPKDLFHITPAYRKTLWIVVLINIGYGIIEMIGGFLADSQALKADALDFLGDGSITFLGLLAIGWCLKLRASSALIQGIFLGAMGIGVLAYTIYRTQVLQIPEAGLMSILGFIALLINVIAVIVLLPHRKGDANVRAVWIFSRNDALGNILVVVAAGLVFWTNTSWPDLIAAGIIAIIFLQSSFSIIKDARNDIQKSKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N0</accession>
    <name>A0A087S3N0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Plastocyanin protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00081</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20334">
        <property type="protein sequence ID" value="KFM20334"/>
        <property type="gene ID" value="AAA799P11_00081"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.78"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002386">
        <property type="entry name" value="Amicyanin/Pseudoazurin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00155">
        <property type="entry name" value="AMICYANIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="91"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Copper-bind" evidence="3">
        <location>
            <begin position="282"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="364" mass="38690" checksum="0C7F923E8CB5A769" modified="2014-10-29" version="1">MSNWDLMMPGMGLTAIGLAGVTLSYAGIAHTFIDGMHALTGLTMFVGLIFLATGILDGGVSTSNRAKATVLVIASISLGFGMFAFTMNTSAYTVTIAGILMAIAFPAIIIAYLAMKHPQYLKPVGSIVGIASAAGIIAWIAFGFVSPDQYMIPQEVKVEEPSAEEVAPAGPIFTIEILEGSAEEGNPDYEPDAAVVQQGHVVEWINADSVAHTATSAADFGETFDTGLLGAGESFTLDTTNLEIGEYEYFCIVHPWMVATLTIEGAKEPIKVVMPEGAAIPEEGQIYYDPEVITVSVGDTVQWDNADSTVHTVTSGMPPTDATGVFDSEMMMVGDSFEFTFTEAGSYDYYCTFHPWMVGTVNVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P9</accession>
    <name>A0A087S3P9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">L-aspartate dehydrogenase</fullName>
            <ecNumber evidence="6">1.4.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">nadX</name>
        <name evidence="9" type="ORF">AAA799P11_00100</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H2O + L-aspartate + NAD(+) = H(+) + NADH + NH4(+) + oxaloacetate</text>
            <dbReference type="Rhea" id="RHEA:11788"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.4.1.21"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H2O + L-aspartate + NADP(+) = H(+) + NADPH + NH4(+) + oxaloacetate</text>
            <dbReference type="Rhea" id="RHEA:11784"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.4.1.21"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; NAD(+) biosynthesis; iminoaspartate from L-aspartate (dehydrogenase route): step 1/1.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="6">The iminoaspartate product is unstable in aqueous solution and can decompose to oxaloacetate and ammonia.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the L-aspartate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.4.1.21" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20353">
        <property type="protein sequence ID" value="KFM20353"/>
        <property type="gene ID" value="AAA799P11_00100"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.97"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00456"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033735">
        <property type="term" value="F:aspartate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016639">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01265">
        <property type="entry name" value="NadX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005106">
        <property type="entry name" value="Asp/hSer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002811">
        <property type="entry name" value="Asp_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022487">
        <property type="entry name" value="Asp_DH_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020626">
        <property type="entry name" value="Asp_DH_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011182">
        <property type="entry name" value="L-Asp_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01958">
        <property type="entry name" value="DUF108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03447">
        <property type="entry name" value="NAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005227">
        <property type="entry name" value="Asp_dh_NAD_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03855">
        <property type="entry name" value="NAD_NadX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0520">NAD</keyword>
    <keyword evidence="3 6" id="KW-0521">NADP</keyword>
    <keyword evidence="4 6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 6" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_3" evidence="8">
        <location>
            <begin position="8"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="DUF108" evidence="7">
        <location>
            <begin position="170"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="272" mass="29161" checksum="A08280395ED4CE99" modified="2014-10-29" version="1">MKRIALLGCGSMGTQIALAIDSENFPATLTHVYDASKDSSLSLVQKLQNKPEIVENSHLLSSQPIDIVVEAASQDAVKDVALSVLQNKKDLMIMSVGALLDESIYDILSDACKDFKKTIYLPSGAIAGLDGIKSVKDELESLSITTTKHPRSLKGAKFFETSEVNLDEISSSTVVYEGTAKEAVKLFPANINVAALLSLTGIGSEKTSVKIVADPSTDKNTHHIEAAGKFGKMTFTIENVPDTNNPKTSRLAILSAIETLKKYCSDDIQIGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R8</accession>
    <name>A0A087S3R8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">D-3-phosphoglycerate dehydrogenase protein</fullName>
            <ecNumber evidence="4">1.1.1.95</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">serA</name>
        <name evidence="4" type="ORF">AAA799P11_00119</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.95" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20372">
        <property type="protein sequence ID" value="KFM20372"/>
        <property type="gene ID" value="AAA799P11_00119"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.117"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004617">
        <property type="term" value="F:phosphoglycerate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006139">
        <property type="entry name" value="D-isomer_2_OHA_DH_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029752">
        <property type="entry name" value="D-isomer_DH_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00389">
        <property type="entry name" value="2-Hacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00065">
        <property type="entry name" value="D_2_HYDROXYACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2-Hacid_dh" evidence="2">
        <location>
            <begin position="7"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="2-Hacid_dh_C" evidence="3">
        <location>
            <begin position="109"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="310" mass="33683" checksum="9DBBD1F991C54DEA" modified="2014-10-29" version="1">MGFDNSVLICDEVDPILNKILQDNGLKISYEPEITPEQILGKISDYNIVIVRSRTTITKEMIDKADKCKIIARVGVGLDNVDQEAAKAKNIRVINAVEGAMNAVAELVLGLMLALARQTARGDRGIRNEQWLKKELKGTELAGKYLGIIGLGNIGKRLGRLARALNMNIIGYDVVPIDEEFSKEVGLMKADLNTLLQSSDYVSIHVPLLDSTYHLLDAQKMSTMKKTAKIINTSRGGVVDEDALYDALKNGILGGAALDVFEKEPAIGTKLAELDNVILTPHIGAQTKEAQSLAANVIAEKIVQILRGVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S0</accession>
    <name>A0A087S3S0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aspartate ammonia-lyase protein</fullName>
            <ecNumber evidence="3">4.3.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aspA</name>
        <name evidence="3" type="ORF">AAA799P11_00121</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.1" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20374">
        <property type="protein sequence ID" value="KFM20374"/>
        <property type="gene ID" value="AAA799P11_00121"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.119"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008797">
        <property type="term" value="F:aspartate ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018951">
        <property type="entry name" value="Fumarase_C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10415">
        <property type="entry name" value="FumaraseC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lyase_1" evidence="1">
        <location>
            <begin position="11"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="FumaraseC_C" evidence="2">
        <location>
            <begin position="406"/>
            <end position="451"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="453" mass="49031" checksum="A4E9B2892CF103B9" modified="2014-10-29" version="1">MKFRLDQDSLGKVKIPSDAYYGAFTGRAIKQYHVTGNKSHENLIKSFVMIKRSAAVANMKTKAIDNKRGKAIVSACDKILAGKHVDQFVVDMINSGAGTAFNMNSNEVIANVALETLRKKKGQYEFLHPNDHVNMSQSSNDTYPTAMHVAILMNLKETIPAIDILIKSLSKKAKQFSSFKKIGRTHLMDALPVTLGSEFAAYVTSITKARNEIAASQKELQNVALGGTAVGSGANTPKGYRKIAISELAKISKLSLKPEKDMQHGLQSKYAVANCSSALRNLALEIGKLANDIRLMASGPIAGLAELGIPAVHAGSSIMPGKVNPSLAECMNMVCFNVIGNDTAVSYAAQSGQFELNVMLPGMLKCMLESTDMLKNFLPIFSANLIDGLTANKDKLRADIENSPVIVTLLTPKIGYLKSAELFKESLKTGKTIRELVVSKKLMTNKEIDSLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPU3</accession>
    <name>A0A087RPU3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01499</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000086">
        <property type="protein sequence ID" value="KFM15497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15497">
        <property type="protein sequence ID" value="KFM15497"/>
        <property type="gene ID" value="AAA799P11_01499"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="36" mass="3880" checksum="1853A6E86D692D3E" modified="2014-10-29" version="1" fragment="single">MEPTSLILSIVSIINMGILGILIAIFGNMYGKTRAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQJ1</accession>
    <name>A0A087RQJ1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glutathione-regulated potassium-efflux system protein KefB</fullName>
            <ecNumber evidence="6">3.6.3.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">kefB</name>
        <name evidence="6" type="ORF">AAA799P11_01479</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.32" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000074">
        <property type="protein sequence ID" value="KFM15745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15745">
        <property type="protein sequence ID" value="KFM15745"/>
        <property type="gene ID" value="AAA799P11_01479"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1379"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006812">
        <property type="term" value="P:cation transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="48"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="78"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="109"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="5">
        <location>
            <begin position="9"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM15745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="208" mass="21863" checksum="43221461D3AD3339" modified="2014-10-29" version="1" fragment="single">PSADVLEGVGILSDISALNLFAEIGVILLLFVIGIEFPYAKIKSIGRVAVGVGTIGLFSTLGVVFCTATALGLEFMDALFIAAALSISSTAIIVKILEDMGKIKKESSILVLGILIVEDVIAVILISSLQSIALVGSVSVESIVVVVLVATGLIVGTFTVGTRVIPPLIDRVAAAEHREILLICKYCGIISRNWCLFGRCFSSRIKVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RRT1</accession>
    <name>A0A087RRT1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-containing ferredoxin-2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01453</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000062">
        <property type="protein sequence ID" value="KFM16185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16185">
        <property type="protein sequence ID" value="KFM16185"/>
        <property type="gene ID" value="AAA799P11_01453"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1367"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13187">
        <property type="entry name" value="Fer4_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="2"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="39"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="70" mass="7576" checksum="8CA19C194602C933" modified="2014-10-29" version="1" fragment="single">GEFVSVDYDICVADGGCIEACPVGVYEWFDTPGNPASDKKPLMSKEPDCIFCLACEGVCPPQAIKIFEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS51</accession>
    <name>A0A087RS51_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01448</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000058">
        <property type="protein sequence ID" value="KFM16305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16305">
        <property type="protein sequence ID" value="KFM16305"/>
        <property type="gene ID" value="AAA799P11_01448"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="35" mass="4380" checksum="CE7971DB2D3B50D6" modified="2014-10-29" version="1">MGKKERDDEDENLAEKKNKDWWRLEKSQIGRRRFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSC2</accession>
    <name>A0A087RSC2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase IS4 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01439</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000053">
        <property type="protein sequence ID" value="KFM16376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16376">
        <property type="protein sequence ID" value="KFM16376"/>
        <property type="gene ID" value="AAA799P11_01439"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="3"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="18032" checksum="D9A4F570EADD8948" modified="2014-10-29" version="1" fragment="single">CSIKIRHRHRHDSVDFVPLLRHTASLVSVDMVVADRGYDSENNHIAAENLGIQNTIIRPKYESLPVYKTKGFHRKMLKRKFDWESYHHRNKAETIFSVIKRMLGEYVMSRYILTQNREVMYRIIAYNCYRITRDSLLIFGVFYRAIGNLFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSK5</accession>
    <name>A0A087RSK5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">FO synthase subunit 2 protein</fullName>
            <ecNumber evidence="3">2.5.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01431</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.77" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000049">
        <property type="protein sequence ID" value="KFM16459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16459">
        <property type="protein sequence ID" value="KFM16459"/>
        <property type="gene ID" value="AAA799P11_01431"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1354"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045567">
        <property type="entry name" value="CofH/MnqC-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034405">
        <property type="entry name" value="F420"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43076">
        <property type="entry name" value="PTHR43076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19288">
        <property type="entry name" value="CofH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CofH_C" evidence="2">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="117" mass="12842" checksum="D99ED9992939B499" modified="2014-10-29" version="1" fragment="single">IPWNFEPNNTLMHEEGLVEYGTGGIQLLKMIAISRLIFDGLIPHIQSSWLTNGIGMAQLALQYGADDFGGTLIGEEVVSCTGARSTELTDKIIIDAIHQIGYSVEERDNFYNPISVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSY0</accession>
    <name>A0A087RSY0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">V-type ATP synthase beta chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_01421</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000046">
        <property type="protein sequence ID" value="KFM16584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16584">
        <property type="protein sequence ID" value="KFM16584"/>
        <property type="gene ID" value="AAA799P11_01421"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1346"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022879">
        <property type="entry name" value="V-ATPase_su_B/beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43389">
        <property type="entry name" value="PTHR43389"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-synt_ab" evidence="4">
        <location>
            <begin position="14"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM16584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="190" mass="21203" checksum="4644296B1375846B" modified="2014-10-29" version="1" fragment="single">LAAQIARQASVIGTQDDFAVVFAAIGVQYNEAEYFRRSLEESGALKRSVLFLNTADDPAIERIITPRVALTVAEYLAFELGMHVLVILTDMTNYAEALREISAAREEVPGRKGYPGYLYTDLSTIYERAGKLNGKKGSVTQVPILSMPSDDITHPIPDLTGYITEGQIVLGRDLFRKLDESIKTNERRYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTL1</accession>
    <name>A0A087RTL1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Oligoendopeptidase F protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pepF</name>
        <name evidence="8" type="ORF">AAA799P11_01407</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000042">
        <property type="protein sequence ID" value="KFM16815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16815">
        <property type="protein sequence ID" value="KFM16815"/>
        <property type="gene ID" value="AAA799P11_01407"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1335"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1370.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042088">
        <property type="entry name" value="OligoPept_F_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045090">
        <property type="entry name" value="Pept_M3A_M3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001567">
        <property type="entry name" value="Pept_M3A_M3B_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11804">
        <property type="entry name" value="PTHR11804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01432">
        <property type="entry name" value="Peptidase_M3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M3" evidence="7">
        <location>
            <begin position="146"/>
            <end position="483"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM16815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="506" mass="57853" checksum="D972ECF3E5AF8AE2" modified="2014-10-29" version="1">MDILNQVEEISEKMSKIGGYASLSYSSDTQSDEATSLMTRMSKLGSDISNKILFFDLWWKTQVDEKNAKRLIKSAGELSEYLAHKRLIAKYSLSEPEERIINTLDVTGISALVKLYDKITNAFEYQMKIGNKTKTMTREELTNYVRDTNPKIRETAYKTILGKYNENKGVVGEIYQNIALNWKDEGIDIRGYKTPISMRNIGNDVDDKTIESLLTVCKKNAPVFQKFFVQKAKMLKMKKLRRYDIYAPAAANIKEKNYSYNKSVKLVFESLGKFSNTLEDFARKVFNENHIDSSVRQGKRDGAFCSTLTPKITPYVLVNFTGKSRDVFTLAHELGHAVHSQAAQDRSILVQDAPLPLAETASTFSELLLYDNISDKISDDEKKIMLSEKIDDLYATILRQSFFTIFEIDAHKQIGKGTTIDEISKTYLQNLKLQFGKSVDVTDDFAIEWSCIPHFYHTPFYCYAYSFGNLLALSLFQRYKKEGQDFVPAYIQGVQKNLKNFFKSTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTL7</accession>
    <name>A0A087RTL7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01399</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000041">
        <property type="protein sequence ID" value="KFM16821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16821">
        <property type="protein sequence ID" value="KFM16821"/>
        <property type="gene ID" value="AAA799P11_01399"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1328"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="191" mass="21572" checksum="F1877F6BE571B56E" modified="2014-10-29" version="1" fragment="single">NAMAELGMLIPENNRQVIEKGIELSIRAMHGNKPDEMEVQSLMELANQTMSKFPFVLPKNLALYMRMASIIEGIYKTHNVDFKFVIVLRNILQEENMIPKAYVEELKISFDKFAKSIDSALRLGPEMEKFMDEAKISMQKRKPIVFLGGSIFASAIFIGSVLLYQTDEVFGMAGMITSGLIMIGSAIFRKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTL8</accession>
    <name>A0A087RTL8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">18 kDa antigen 2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01400</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000041">
        <property type="protein sequence ID" value="KFM16822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16822">
        <property type="protein sequence ID" value="KFM16822"/>
        <property type="gene ID" value="AAA799P11_01400"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1329"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="SSF49764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SHSP" evidence="3">
        <location>
            <begin position="17"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM16822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="125" mass="14066" checksum="EE3543D529E3EE2C" modified="2014-10-29" version="1">MGLVKEVIKEIGNKSREFYEFVLPPIDMYLSSDSLKVIIDIPGFSKKDIKLTLCGDILSIQACKVDEKESESLISKQRPNIIDKKIRLPIDIKQGEEKIDSAKYEDGVLTLVIPVTKKGKDISIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTL9</accession>
    <name>A0A087RTL9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">C2H2-type zinc finger protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01401</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000041">
        <property type="protein sequence ID" value="KFM16823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16823">
        <property type="protein sequence ID" value="KFM16823"/>
        <property type="gene ID" value="AAA799P11_01401"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1330"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="SSF57667"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="40" mass="4451" checksum="FBFD17ECE4DBCB2B" modified="2014-10-29" version="1">MAEEYSCPYCESIFESKDDLSKHIDRIHGDSGVLEGSKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUD9</accession>
    <name>A0A087RUD9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01389</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000038">
        <property type="protein sequence ID" value="KFM17093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17093">
        <property type="protein sequence ID" value="KFM17093"/>
        <property type="gene ID" value="AAA799P11_01389"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1320"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="253"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="293" mass="32766" checksum="936486AE1CEF21A2" modified="2014-10-29" version="1" fragment="single">AVLGKKNEFLRTPKYGVLKKKDDWKDNAYNLPFSQVTLLEIFFGVYGMLGIFVAIFSNNPIFVPIIALQTVGFFYIAYLSLSHTRFKRNKSSVARVMTKKEKMANRVYKLSMVGIVGIIIFGGFMAIYGYSVDIYPLDRIRGNLDGIIGSSDPEDIRTHLVAIQADMDGIMANDLIPEKTNADGEIISKNPVWLFSTESTNFVRIQENLDTLRASVDKIATVPKDSSAYHTGMMDVSDRALLIKTNIMDATPYMYVSVANLMFTTVWIAALLGIFAALKRKKEQLKEADDVGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUG1</accession>
    <name>A0A087RUG1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative deoxyhypusine synthase protein</fullName>
            <ecNumber evidence="2">3.2.1.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dys</name>
        <name evidence="2" type="ORF">AAA799P11_01385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the deoxyhypusine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000037">
        <property type="protein sequence ID" value="KFM17115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17115">
        <property type="protein sequence ID" value="KFM17115"/>
        <property type="gene ID" value="AAA799P11_01385"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1316"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008612">
        <property type="term" value="P:peptidyl-lysine modification to peptidyl-hypusine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002773">
        <property type="entry name" value="Deoxyhypusine_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036982">
        <property type="entry name" value="Deoxyhypusine_synthase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11703">
        <property type="entry name" value="PTHR11703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01916">
        <property type="entry name" value="DS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="84" mass="9348" checksum="5A633C566A011633" modified="2014-10-29" version="1" fragment="single">GAFMIGGGISKHHTLWWNQYREGLDYAFYITTAQEFDGSLSGALVREAISWGKVTQKAKQSTLHAEVTTILPFIYAALLSKLQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUJ7</accession>
    <name>A0A087RUJ7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Integrase-recombinase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01377</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17151">
        <property type="protein sequence ID" value="KFM17151"/>
        <property type="gene ID" value="AAA799P11_01377"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="23500" checksum="5D006E27069DF8D7" modified="2014-10-29" version="1">MLKVTRKDWGRHRRLLQDPDVKRWYDNIARGSVVTADVRLRRLGVYCENTKTIPKEFAEIGIKNVRDAEDLLLDYVSFLEKKGYAPSYIEDILKALRSWLSFNYVKLVRKIKIKNADIPVTLENEEIPSKSKLGDVLNSAPARERVSISFMALAGIRPEVLGNYHGNDGLKISDIKDMELKDGDVFFERIPAKITVRSALSKAGHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV95</accession>
    <name>A0A087RV95_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DITP-XTP pyrophosphatase protein</fullName>
            <ecNumber evidence="2">3.6.1.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01357</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAM1 NTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.19" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17399">
        <property type="protein sequence ID" value="KFM17399"/>
        <property type="gene ID" value="AAA799P11_01357"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1294"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047429">
        <property type="term" value="F:nucleoside-triphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009143">
        <property type="term" value="P:nucleoside triphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00515">
        <property type="entry name" value="HAM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002637">
        <property type="entry name" value="Ham1p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11067">
        <property type="entry name" value="PTHR11067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01725">
        <property type="entry name" value="Ham1p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="119" mass="13646" checksum="A4C847A2DAF6D156" modified="2014-10-29" version="1">MQKTNDSLKGFPGPYSSYVFKTIGNKGILKLVPSKRKAKFVSIITYCDKKILESFNAKLDGTISKSQKGKGWGYDPIFIPKNSRKTFAEVDHKNKLSHRFKALKKFSNWYLHKLESNGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVF7</accession>
    <name>A0A087RVF7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">GMP synthase (glutamine-hydrolyzing)</fullName>
            <ecNumber evidence="4">6.3.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">GMP synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">AAA799P11_01342</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the synthesis of GMP from XMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + L-glutamine + XMP = AMP + diphosphate + GMP + 2 H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:11680"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.5.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; GMP biosynthesis; GMP from XMP (L-Gln route): step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000032">
        <property type="protein sequence ID" value="KFM17461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17461">
        <property type="protein sequence ID" value="KFM17461"/>
        <property type="gene ID" value="AAA799P11_01342"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00189">
        <property type="reaction ID" value="UER00296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016462">
        <property type="term" value="F:pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01742">
        <property type="entry name" value="GATase1_GMP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01997">
        <property type="entry name" value="GMP_synthase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001674">
        <property type="entry name" value="GMP_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004739">
        <property type="entry name" value="GMP_synth_GATase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025777">
        <property type="entry name" value="GMPS_ATP_PPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022310">
        <property type="entry name" value="NAD/GMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00958">
        <property type="entry name" value="GMP_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02540">
        <property type="entry name" value="NAD_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00884">
        <property type="entry name" value="guaA_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00888">
        <property type="entry name" value="guaA_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51553">
        <property type="entry name" value="GMPS_ATP_PPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="6 11" id="KW-0332">GMP biosynthesis</keyword>
    <keyword evidence="13" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 11" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMPS ATP-PPase" evidence="12">
        <location>
            <begin position="193"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="218"/>
            <end position="224"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM17461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="465" mass="51585" checksum="8C769C3D023985FC" modified="2014-10-29" version="1" fragment="single">MDKIVVLDFGSQYSHLICRRIREFSVYAELVPFDISYEELQKHNPRGIIFSGGPSSVYNSDAPVPENKIFDMNLPLLGICYGHQLIVNKYGGKVKRANKEYGSSLLTIDNDKDLLNGVGESVRAWMSHGDEAEEIPPGFQVIGHTESAKAAAIASDEKSVYGIQFHPEVVHTEQGTEILKNFVLKVCGAKQDWTMEGFIDSAVEKISKIEGNVLCGVSGGIDSTVAALLIHKAIGDRLKCVFVNNGLLRLNEETEIETMFKDNFNVNFTSINAVDKFLDKLKGVEDPEKKRMIVGEEFVNVFTDFAEKNGPFKWLAQGTLYPDVIESGVSKGPADVIKSHHNVGGLPDWLNLEILEPLRELYKDEVRMIAKILEVPEKLFMRHPFPGPGLAVRIIGEVTPTKLHIAKVASKIVEDELVEDDMYSKVWQAYAAVGDDRAVGVVGDERKYGNIVMIRVVDSIDAMTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ7</accession>
    <name>A0A087RVJ7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Homoserine kinase protein</fullName>
            <ecNumber evidence="1">2.7.11.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01333</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.19" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17501">
        <property type="protein sequence ID" value="KFM17501"/>
        <property type="gene ID" value="AAA799P11_01333"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1273"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004689">
        <property type="term" value="F:phosphorylase kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="8344" checksum="E47B3911A6D7BA4B" modified="2014-10-29" version="1">MTSKITVKAPSSTANLGPGFDVFGLAVDAFYDEVTLTKTKSGITIVTEDNIPTNPENNTAGLVVKNMKKKIQDKKWN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVP1</accession>
    <name>A0A087RVP1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000029">
        <property type="protein sequence ID" value="KFM17545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17545">
        <property type="protein sequence ID" value="KFM17545"/>
        <property type="gene ID" value="AAA799P11_01305"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="8028" checksum="4838AFB2CB64E511" modified="2014-10-29" version="1">MKDINDIMPKVPNMRWGALMNKPPTNEKVEEMNKIFPSNGKWHTIFEEKDSVTIDGKEIRKKDPNKWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVP2</accession>
    <name>A0A087RVP2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01306</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000029">
        <property type="protein sequence ID" value="KFM17546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17546">
        <property type="protein sequence ID" value="KFM17546"/>
        <property type="gene ID" value="AAA799P11_01306"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1246"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="530" mass="60031" checksum="26531219F45A7C7C" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV3</accession>
    <name>A0A087RWV3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA ligase ADP-forming subunit beta protein</fullName>
            <ecNumber evidence="3">6.2.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sucC</name>
        <name evidence="3" type="ORF">AAA799P11_01265</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.13" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17957">
        <property type="protein sequence ID" value="KFM17957"/>
        <property type="gene ID" value="AAA799P11_01265"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1213"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043758">
        <property type="term" value="F:acetate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="165"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="372" mass="40911" checksum="5DA3376095786B17" modified="2014-10-29" version="1">MADITSVRKQIDEVIPPWGSSRNPVDIVGDADFNRFHNVLDRVLKHPKVGSVISMCTPSGTLNYDKLAEVIVTMSKKYKKTMLASLMGLDEGITNREILAAGNVPYYTYAEGAIRTLAAMIRFSNWVKSSPGKITKFKVNKAKAKKIFDKVKKEKRPNLLEEEGQEVLKAYGLPLPKSALAKNEAEAVKIAKKIGYPVVMKIASPQIIHKSDAGGVKVNLTNDAEVKDAFKTIVQNAKKYNKKAEIKGVLIVEMVKGGKELIIGSKLEPGFGPVIMLGMGGIYVEVLKDVTFKLAPVTDKEADDMIASIKTQKLLQGVRGEKPSDIAKLSECIQRLSQLVSDFKEIKELDMNPVLVMEKGKGCRILDVRIGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY7</accession>
    <name>A0A087RWY7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01261</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17991">
        <property type="protein sequence ID" value="KFM17991"/>
        <property type="gene ID" value="AAA799P11_01261"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="64" mass="7164" checksum="91A19B13A383E7D0" modified="2014-10-29" version="1">MMMFFATGMLGIIIGLSPIAGKEQTMFITFMGVVNIGLGAFFTFIFLTQEAKAPDKRKKKKKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXC9</accession>
    <name>A0A087RXC9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fructose-bisphosphate aldolase class II protein</fullName>
            <ecNumber evidence="3">4.1.2.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01224</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.13" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000022">
        <property type="protein sequence ID" value="KFM18133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18133">
        <property type="protein sequence ID" value="KFM18133"/>
        <property type="gene ID" value="AAA799P11_01224"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1177"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004332">
        <property type="term" value="F:fructose-bisphosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="294"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="Nitroreductase" evidence="2">
        <location>
            <begin position="199"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="Nitroreductase" evidence="2">
        <location>
            <begin position="261"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="360" mass="41261" checksum="7A9D466A848D5F53" modified="2014-10-29" version="1" fragment="single">ATQNRELFYRVIAYNVYRINRDKLLIWYGFYTADMTNNMKYQRIEPAYTSKDGCRIVWSGVDEDDTDTVILNKNELEKLVELFKKNSVGEVELEDQSSYIRINSDVTQFSLSNHRLLEADTNQIQKEVLEYAKVPHEPQYVYIGTKEFYPSVWVRDDKKEQRGISTKDPQKSLIQAILSSEPEKIRQDLSPTDLFRVFATRRSTRKFDKSKVEDWKIDKILSAADVAPTAGNFQGFQVFLVKNPKAKEALVEAANKQPYVNAPVVLVFCTDPSRVKLKFTPKILDKFSLQDATIAAAFSLLAASGVGLSTIWIGMFDEEKVKEILGTDLRPSSILCIGYPDKKKPPKSRRHLKELIKVIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI7</accession>
    <name>A0A087RXI7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA topoisomerase 1 protein</fullName>
            <ecNumber evidence="1">5.99.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">topA</name>
        <name evidence="1" type="ORF">AAA799P11_01222</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.99.1.2" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18191">
        <property type="protein sequence ID" value="KFM18191"/>
        <property type="gene ID" value="AAA799P11_01222"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1175"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="170" mass="19431" checksum="1DCC099CCA69C49F" modified="2014-10-29" version="1">MSLTQVPIKIVLVIPIQNMPSKKLQTVQIKKTMVIHSVKTTKSKTNVFKKEIIQYLDGNGYLSWSSKDKKYMILGTNSPKNGLVQCPQCKVGELMVIRSRTTRKRFMGCSNFYGGCKASSPLLQKAKLRATKSPCDVCKWPMVIFRYSRKQQWTKQCSNFNCKSRVKPSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN8</accession>
    <name>A0A087RXN8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01164</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18242">
        <property type="protein sequence ID" value="KFM18242"/>
        <property type="gene ID" value="AAA799P11_01164"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1121"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018747">
        <property type="entry name" value="DUF2299"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10061">
        <property type="entry name" value="DUF2299"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="149" mass="17188" checksum="BB4324C23775751D" modified="2014-10-29" version="1">MSASRMRDNVERWLIHEGLKFEDIKNQENTFQILVKHAGPAGVPVEIFEPKAQQGILVIGSKVNMKNNQIARYLGFSEAEKEKFEKKVADYCYTIQAINKNTTEDGKRKIGVYVVLDKEEDINQQGLFDAMDRVSEMHEKTARFLMKTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ5</accession>
    <name>A0A087RXQ5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inosine-5'-monophosphate dehydrogenase protein</fullName>
            <ecNumber evidence="3">2.3.1.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01181</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.31" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18259">
        <property type="protein sequence ID" value="KFM18259"/>
        <property type="gene ID" value="AAA799P11_01181"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1138"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004414">
        <property type="term" value="F:homoserine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="8"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="73"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="15917" checksum="4E4D3632F7E7A681" modified="2014-10-29" version="1">MAHVRDIMQKNVITIEHDKTVHDAAVILKEKEISFLVIMRNKKPVGVVSERDIVQKVAAKDAKASSVQLEDVMSKKFRWVSPDTPIEGAVQKMLNNNIRRLIILDNDENLVGVITQTNLAEFLRSKILINGMLENIDSEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXS2</accession>
    <name>A0A087RXS2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cation transport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">AAA799P11_01198</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18276">
        <property type="protein sequence ID" value="KFM18276"/>
        <property type="gene ID" value="AAA799P11_01198"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1155"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003445">
        <property type="entry name" value="Cat_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02386">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0129">CBS domain</keyword>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="155"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="188"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="219"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="286"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="326"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="385"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="418"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="467"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="520"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="580"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="9">
        <location>
            <begin position="21"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="9">
        <location>
            <begin position="87"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="605" mass="66127" checksum="502D8E26E0BB990D" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ2</accession>
    <name>A0A087RXZ2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glutamate--tRNA ligase 2 protein</fullName>
            <ecNumber evidence="1">6.1.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gltX2</name>
        <name evidence="1" type="ORF">AAA799P11_01121</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.17" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18346">
        <property type="protein sequence ID" value="KFM18346"/>
        <property type="gene ID" value="AAA799P11_01121"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004818">
        <property type="term" value="F:glutamate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="132" mass="15203" checksum="FB5F905A723DF169" modified="2014-10-29" version="1">MEKFEKLLNMLMDFNKDIRFAAVCTKDGEILWNSKRNNVKNYVPLSHTKKTLQRATNAWDERANISKMVGKGLYVIAAYEKIKRVTIPLDKQHILFFSVDNTPMKASNKKSYGHLVEMGKIMSIVDFVNSTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY00</accession>
    <name>A0A087RY00_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01129</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18354">
        <property type="protein sequence ID" value="KFM18354"/>
        <property type="gene ID" value="AAA799P11_01129"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="114" mass="13147" checksum="2707C6614C6578C4" modified="2014-10-29" version="1">MTFVCKNPNGICPGKENPQENNTSMIITRDVKYVKCMLTNLIEDAPVAIPLDNAYLQPVLENLFEEYQKGLADLSIDDNTRILEENKKLIVEKYELQKQTDEMGELKNRLEEQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY01</accession>
    <name>A0A087RY01_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18355">
        <property type="protein sequence ID" value="KFM18355"/>
        <property type="gene ID" value="AAA799P11_01130"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="57" mass="6673" checksum="1F57D6F7F9654F0D" modified="2014-10-29" version="1">MKPLSDQGFLDETIDPNNRTRHIYCLPQKYQKEDATIESTLIYISILDYSCVESFVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY23</accession>
    <name>A0A087RY23_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18377">
        <property type="protein sequence ID" value="KFM18377"/>
        <property type="gene ID" value="AAA799P11_01090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="32" mass="3928" checksum="2BFA91FEB4C33E23" modified="2014-10-29" version="1" fragment="single">DLQEEKDRIHSEFSELSQKYVEHREEIAGMYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYM3</accession>
    <name>A0A087RYM3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">3-isopropylmalate dehydrogenase protein</fullName>
            <ecNumber evidence="5">1.1.1.85</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">leuB</name>
        <name evidence="5" type="ORF">AAA799P11_01064</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the isocitrate and isopropylmalate dehydrogenases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.85" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18577">
        <property type="protein sequence ID" value="KFM18577"/>
        <property type="gene ID" value="AAA799P11_01064"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1026"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003862">
        <property type="term" value="F:3-isopropylmalate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011828">
        <property type="entry name" value="LEU3_arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02088">
        <property type="entry name" value="LEU3_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Iso_dh" evidence="4">
        <location>
            <begin position="3"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="337" mass="36836" checksum="8FC3F7F004B4B96B" modified="2014-10-29" version="1">MYKISLITGDGIGPELSESAISILTAIHDKLDLKFDITKLSAGDKALEQTGKALPDETVDAIKQSDACMKAPVGESAADVIVVLRRMLDLYANIRPAKSYPHMPALRDDIDMVIVRENTEDLYTGKEFSLGDSAVALRIISENASKRIAKYAFESAKQRDSMRKVTCVHKSNVMRVTDGLFAKACTEVSKNYPDITFEQMYVDACAMNLIRQPEQFDVIVTTNLFGDILSDESSQVVGGLGMAPAANIGDNFALFEPVHGAAFDIAGQNIANPSSFLLSIKMMLDWLGTKHNDSKCFEVGQKLESTIFDLVKTGVKTKDIGGDKTTSEFTKQITDNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ17</accession>
    <name>A0A087RZ17_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable translation initiation factor IF-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">infB</name>
        <name evidence="9" type="ORF">AAA799P11_01011</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6 7">Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18721">
        <property type="protein sequence ID" value="KFM18721"/>
        <property type="gene ID" value="AAA799P11_01011"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.977"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10050">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00100_A">
        <property type="entry name" value="IF_2_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029459">
        <property type="entry name" value="EFTU-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004544">
        <property type="entry name" value="TF_aIF-2_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023115">
        <property type="entry name" value="TIF_IF2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036925">
        <property type="entry name" value="TIF_IF2_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="PTHR43381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14578">
        <property type="entry name" value="GTP_EFTU_D4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11987">
        <property type="entry name" value="IF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52156">
        <property type="entry name" value="SSF52156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00491">
        <property type="entry name" value="aIF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1 6 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 6 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="8">
        <location>
            <begin position="1"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="70"/>
            <end position="74"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="586" mass="64875" checksum="C0C3E8819353C318" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ59</accession>
    <name>A0A087RZ59_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00972</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18763">
        <property type="protein sequence ID" value="KFM18763"/>
        <property type="gene ID" value="AAA799P11_00972"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="155" mass="17888" checksum="A03BFA4A5FE302BA" modified="2014-10-29" version="1">MIYNTDEKLLKIKSINYNIMKRSDGFKFLGFVIIPGMAILSFSQFVVELFGQTIPHVFLSFFREASVVIIVGAALLFAAAWLVKALPRNHTKNYSLICFDVFGKESLLDGLRTEFKTNDVAWSFMKEYKQRHPLYNFALVTETLNSEKKTIVRYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ65</accession>
    <name>A0A087RZ65_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00978</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18769">
        <property type="protein sequence ID" value="KFM18769"/>
        <property type="gene ID" value="AAA799P11_00978"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="29" mass="3295" checksum="B82DCEBA35FFB91A" modified="2014-10-29" version="1">MSFTQKNQKIESVKIKGNAVIFSEGQIRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ66</accession>
    <name>A0A087RZ66_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phenazine biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00979</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18770">
        <property type="protein sequence ID" value="KFM18770"/>
        <property type="gene ID" value="AAA799P11_00979"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.944"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003719">
        <property type="entry name" value="Phenazine_PhzF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13774">
        <property type="entry name" value="PTHR13774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02567">
        <property type="entry name" value="PhzC-PhzF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016184">
        <property type="entry name" value="PhzC_PhzF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00654">
        <property type="entry name" value="PhzF_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="258" mass="28663" checksum="CCCD551D1A32B805" modified="2014-10-29" version="1">MGVFTEKNFEVNQLAVFPSAEGITDENMQKIAKEFNYSETTFVTSTEEKNIKNVRIFTPESEVDFAGHPNIGTAMLLALIGEYFDKKQIDIIFKEKVGDVPLRISFENSKPQNAELSVAKLPEEGSDILSLEQIAKAISLNVSDIVSSEQPLAFSCGLQFLFVPIINLDKLKQATLNYEQWKNNISKSWAPQLFLFTNETVLPNSNFHARMFAPALGISEDPATGSAVAALAGYISKKMMERSLMLLNKDLKSIDLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ82</accession>
    <name>A0A087RZ82_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UDP-N-acetyl-D-mannosamine dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.336</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">UDP-ManNAc 6-dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">wecC</name>
        <name evidence="9" type="ORF">AAA799P11_00995</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + 2 NAD(+) + UDP-N-acetyl-alpha-D-mannosamine = 3 H(+) + 2 NADH + UDP-N-acetyl-alpha-D-mannosaminouronate</text>
            <dbReference type="Rhea" id="RHEA:25780"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:68623"/>
            <dbReference type="ChEBI" id="CHEBI:70731"/>
            <dbReference type="EC" id="1.1.1.336"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.336" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18786">
        <property type="protein sequence ID" value="KFM18786"/>
        <property type="gene ID" value="AAA799P11_00995"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.961"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0089714">
        <property type="term" value="F:UDP-N-acetyl-D-mannosamine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028359">
        <property type="entry name" value="UDP_ManNAc/GlcNAc_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500136">
        <property type="entry name" value="UDP_ManNAc_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="8">
        <location>
            <begin position="327"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="450" mass="51374" checksum="8AE70606BF3154B0" modified="2014-10-29" version="1">MLEKTLDDVNLKKSQVEVFGLGYVGFPLAVRLANGGFTVSGIDVNPERLSRLENNNLNETELNIKKEFLHVRNENLLTFLEKPNKYENSKIAFICVHTPIATEDVDSDTYVKNAIEQFLETSKKGDVIIIESSIGGGTTEKMQKIIQDFGYNVGKDFGLCFCPERIDPQNKKWNLENIPRIIYCSDDTTFRIIQKLYQPINHAHLHRVSSPKIAEVVKSYENAFRLVNISLVNELGILCERLGIDVKEVINAAKTKPFGFMPFYPSAGAGGHCIPKDPRFLSHAATQNNLKFSTIENALQINLDIPKHICNKIEENLENNNMEKSVLVCGLSYKPDVGDMRDSPGFKILKELKKRKFKVGGYDPYFNPKLIEKYLTENFLKELEFEKVEKLTDEEISEFSCVCLVQNHSIDKFRINEIYEKSKIKMIYDCLGKIEFKTESKTILKTFGKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZA7</accession>
    <name>A0A087RZA7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glucose 1-dehydrogenase 3 protein</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00932</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18811">
        <property type="protein sequence ID" value="KFM18811"/>
        <property type="gene ID" value="AAA799P11_00932"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.895"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="588" mass="63952" checksum="D2878FFBECFAA873" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZA8</accession>
    <name>A0A087RZA8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Integrase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00933</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18812">
        <property type="protein sequence ID" value="KFM18812"/>
        <property type="gene ID" value="AAA799P11_00933"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.896"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="134"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="391" mass="45451" checksum="2ED8780FF24944FD" modified="2014-10-29" version="1">MNNRNKLLTTSILTKKHHQIMDKTEESFLNFDDGISSRYTRRAYHRAINRFMELHGMGSFDIVTKLPQEEISSLVKQFIRHLKEQDLATNTVKLNLVGVLLFFDMNDILLNKKKLYKMVKPNDEESQKRKSVLAGKKPYTDDDIRKLLGATKKLRTKAIIHFFTSTGARPAVIWDPILRMKHLFKMPQGCKALNLYSESDEEYWSFLTPEAAKALQDYHDLRKDSGEIFDDETPVFAIRKGKPMSEYSVRAVIKDTIKQAGIAKTKINNKTDKASFYGFRKRFNTILKSNNNVNSNIAEKLMAHKNGLDGVYLQPTKEECFAEFVKSAPQLMIDQTEIQQHKIQELEKQNDHEISKLRNEIQILKEIIEEQEIPKEEWEEIKKNSPKLSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG6</accession>
    <name>A0A087RZG6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00901</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18870">
        <property type="protein sequence ID" value="KFM18870"/>
        <property type="gene ID" value="AAA799P11_00901"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.863"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="250" mass="27268" checksum="42F785425FAC1A07" modified="2014-10-29" version="1">MKTAITAIAAILLVATSVSLAYAEVPAWVKNNAGWWADGTISDGEFVNAIQHLIKSGLISVSAHSEKPMTSDVSDNTDSKLAELEAELEKCSEITKAYKRLDCEKPIKQAIKIHEYKSGAQQFDLGPITYYWTGLGSEGNEFEITATGQPLLSIRMLAENTSSEIAALNCTSPQICAYDVWDGSKAFKYSGMDFTSGQIVLNPGDAREFNILFGPNIGYGGTEFEYDSSKDYVFRISEDFGSANIPLNLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZJ4</accession>
    <name>A0A087RZJ4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptide methionine sulfoxide reductase MsrA</fullName>
            <shortName evidence="2">Protein-methionine-S-oxide reductase</shortName>
            <ecNumber evidence="2">1.8.4.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Peptide-methionine (S)-S-oxide reductase</fullName>
            <shortName evidence="2">Peptide Met(O) reductase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">msrA</name>
        <name evidence="4" type="ORF">AAA799P11_00929</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MsrA Met sulfoxide reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18898">
        <property type="protein sequence ID" value="KFM18898"/>
        <property type="gene ID" value="AAA799P11_00929"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.892"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033744">
        <property type="term" value="F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008113">
        <property type="term" value="F:peptide-methionine (S)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01401">
        <property type="entry name" value="MsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="SSF55068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00401">
        <property type="entry name" value="msrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PMSR" evidence="3">
        <location>
            <begin position="2"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="150" mass="17106" checksum="034D4BAB26612876" modified="2014-10-29" version="1">MKATFGAGCFWHVEDLLSKTKGVKSTQVGYIGGNLPDPTYEEVCTDRTGHAEAVEVEYDPDEISYEELLDVFWNNHNPTTLNRQGPDIGIQYRSAIFYHDEKQKEIAEKSKSQLAASGKYDDPIVTEITPAPKFYKAEEYHQKYFKKNGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM2</accession>
    <name>A0A087RZM2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable cytosol aminopeptidase</fullName>
            <ecNumber evidence="6">3.4.11.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Leucine aminopeptidase</fullName>
            <shortName evidence="6">LAP</shortName>
            <ecNumber evidence="6">3.4.11.10</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Leucyl aminopeptidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">pepA</name>
        <name evidence="8" type="ORF">AAA799P11_00867</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Release of an N-terminal amino acid, Xaa-|-Yaa-, in which Xaa is preferably Leu, but may be other amino acids including Pro although not Arg or Lys, and Yaa may be Pro. Amino acid amides and methyl esters are also readily hydrolyzed, but rates on arylamides are exceedingly low.</text>
            <dbReference type="EC" id="3.4.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Release of an N-terminal amino acid, preferentially leucine, but not glutamic or aspartic acids.</text>
            <dbReference type="EC" id="3.4.11.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="6">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the peptidase M17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.1" evidence="6"/>
    <dbReference type="EC" id="3.4.11.10" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18926">
        <property type="protein sequence ID" value="KFM18926"/>
        <property type="gene ID" value="AAA799P11_00867"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.833"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00433">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00181">
        <property type="entry name" value="Cytosol_peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011356">
        <property type="entry name" value="Leucine_aapep/pepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000819">
        <property type="entry name" value="Peptidase_M17_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023042">
        <property type="entry name" value="Peptidase_M17_leu_NH2_pept"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008283">
        <property type="entry name" value="Peptidase_M17_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11963">
        <property type="entry name" value="PTHR11963"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00883">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02789">
        <property type="entry name" value="Peptidase_M17_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00481">
        <property type="entry name" value="LAMNOPPTDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="SSF52949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00631">
        <property type="entry name" value="CYTOSOL_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 8" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0464">Manganese</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CYTOSOL_AP" evidence="7">
        <location>
            <begin position="333"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="265"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="339"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="258"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="335"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS00631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="488" mass="53201" checksum="A7BBF6D9B1B45312" modified="2014-10-29" version="1">MKIKIQNTPKRTQLLCGFALEESDKVLGLPKLDTKTSFAVSQSLKDIEGKFGKLTIIPSTGKKQFQRILIAGIGKKEDLTKDTFRQISGKIAQKARELKLKEFSIITPPTFVIDQISSTSQIVEGAKMALYKFERFKAEKEEKSPDMTIVVPKSNKVLQAIKTAEIVAEGAIFTKSIANLPPNECTPNTLANFARTISKNKMKCKIISKPELKKKGFGGITAVGQGSKNEPKLIIMEHNRGSKNEKPIVLVGKAVTFDTGGISLKPGANMDEMKFDKCGGCTVLGIMKAVSELKLPINVIGIIPSVENMPGGESYRPGDIIKLYNGKTAEILNTDAEGRLILADALAYGEKHYSPKAIIDFATLTGACIIALGTNVAGMISNNEKLSKKIFESSKNTTEQIWELPLNQEFRDMIKSDVADMKNMGIGKAAGTITAAAFLRNAIEDTPWTHLDIAGVAWTQIATKEKSYNPKGATGFGVRLILDYLQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZQ9</accession>
    <name>A0A087RZQ9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18963">
        <property type="protein sequence ID" value="KFM18963"/>
        <property type="gene ID" value="AAA799P11_00815"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.778"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="64" mass="7315" checksum="190500FC6DBB13CD" modified="2014-10-29" version="1">MIGLIPFMSPAYAVIIVILMYFGIKFYVAKRRQLMERDMGEGICLECGAKIHEKKCPNCDNSQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR2</accession>
    <name>A0A087RZR2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Solute binding protein-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00818</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18966">
        <property type="protein sequence ID" value="KFM18966"/>
        <property type="gene ID" value="AAA799P11_00818"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.781"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="787"/>
            <end position="806"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="2">
        <location>
            <begin position="17"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="813" mass="92619" checksum="44A8C79202FE933B" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT4</accession>
    <name>A0A087RZT4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Digeranylgeranylglycerophospholipid reductase 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18988">
        <property type="protein sequence ID" value="KFM18988"/>
        <property type="gene ID" value="AAA799P11_00840"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.807"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011777">
        <property type="entry name" value="Geranylgeranyl_Rdtase_fam"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02032">
        <property type="entry name" value="GG-red-SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="402" mass="44291" checksum="B65D02DE25BB921F" modified="2014-10-29" version="1">MSETYDLVIVGGGPAGSSAALAASKNGMKVALIEKEESIAESVRTSGVTWIQNIKEFGIPDECYNPVKNFVFYSPNNKVSIGDKVARSAVLDVRKTYRWLASQAEDEDTKIFVNTTVKSAIKDESGKIIGVKATQNEKEIEFYGKVIIDASGFQSTVAKSMGFVEQWERFGAGAEYEAKVEHVKADTWWLMVGQKYSPAGYAWIFPLGDNIARIGVGIGKPDSPVDPIARLKELIENKEGPIADLGKIEPIEFHYGLIPNDGLSRKTVYDNLILVGDSAGQANPLVLEGIRYAIKFGRIAGDVASKAIKANDTSEKKLSEYEENWKKAIESKIKSAGKVQERWIGLTDEDWDKELDIISELKPEEFLDFIKADFGLSNMLKLATSHPKLAVRQLFNLVKGKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT6</accession>
    <name>A0A087RZT6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Serine dehydrogenase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00842</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18990">
        <property type="protein sequence ID" value="KFM18990"/>
        <property type="gene ID" value="AAA799P11_00842"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.809"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002825">
        <property type="entry name" value="Pept_S49_ser-pept_pro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01972">
        <property type="entry name" value="SDH_sah"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="401" mass="45154" checksum="8836E19085F96491" modified="2014-10-29" version="1">MVGVEIKPSELIEENRTPYQLFQAGFPNKQTLATNQNALKKVLCDYLKLILQGDKNLVAQQEKQMVLDGKKLHYLRNYYDADFEIRVNELVSRAKQDPKWIDTVLMTLVSKLMERTRLEKTHDDYMKSSNVENILKPFKKLFKMTDIPIAWGKITSQINDDNDINAFMSCIHGLDKTKGLDLILHTPGGEVGATESIVHYLIQIFGIDIRVIVPQIAMSGGTMIACSSKEILMGKQSSLGPIDPQYRGVSAQGVLSEFKKAQDDVKQDKALIPLWHSIISKYNPTLIGECQNAVKWSEGITREWLKDGMLKDENEPIPIIDRIMSTIASHDNTKSHERHISATKAKEIGLNITMIEDEQELQDAILSVHHASILSLSVGRISKIIENQNGTSMIGVYDLPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU6</accession>
    <name>A0A087RZU6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00852</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM19000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19000">
        <property type="protein sequence ID" value="KFM19000"/>
        <property type="gene ID" value="AAA799P11_00852"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.819"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="159" mass="16900" checksum="CF313FAAA3421E64" modified="2014-10-29" version="1">MTNTIKLVFLNTKYVALSFVIFVPMLIGLLILSEYIFLEPYVVSHLPRGTELGFLLIVIISALAALVLPMNVFRISVLKGSTQKMGGGVIGSFVGAAAGACSCGPIGFAVISTFGSVGATATAFLTNYEIPLRIIAIGVLVITYFTTVKSLKTECKFEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L0</accession>
    <name>A0A087S0L0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cobalt-precorrin 5A hydrolase protein</fullName>
            <ecNumber evidence="4">3.7.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00782</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.7.1.12" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19264">
        <property type="protein sequence ID" value="KFM19264"/>
        <property type="gene ID" value="AAA799P11_00782"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.753"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043779">
        <property type="term" value="F:cobalt-precorrin-5A acetaldehyde-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021745">
        <property type="entry name" value="CbiG_mid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021744">
        <property type="entry name" value="CbiG_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002750">
        <property type="entry name" value="CobE/GbiG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036518">
        <property type="entry name" value="CobE/GbiG_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038029">
        <property type="entry name" value="GbiG_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01890">
        <property type="entry name" value="CbiG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11761">
        <property type="entry name" value="CbiG_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11760">
        <property type="entry name" value="CbiG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159664">
        <property type="entry name" value="SSF159664"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159672">
        <property type="entry name" value="SSF159672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiG_N" evidence="2">
        <location>
            <begin position="54"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="CbiG_mid" evidence="3">
        <location>
            <begin position="137"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="CbiG_C" evidence="1">
        <location>
            <begin position="229"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="350" mass="38411" checksum="CBF24E16E8A3CF3E" modified="2014-10-29" version="1">MEKIAVLAITKNGINISQTLKEFFPEWSVFAPSKFSNQGDSISWYSESTSEKIVELFKNNDALVCLFSLGAVIRLIAPHLKDKKTDPAVIVIDDKTNFVISVLSGHIGGANELTEKIAEKLQAQPVITTAADVNKTIAVDLVGKDFGWKIEDDSNVTRISAHMVNEEPIGVFQDTGEKNWYKQLPKNVSLYNTIEELKNSKSKANLIISDKIIDDELVSKSVIYRPPSLVVGIGLHWDTSKETIKEGINDCLEKFKLSSKSIAKLVSIKKPEDVQGLIDAGQEMGVPVEYVEREDLSKVTAPNPSDTVKAFEGTASVSEAAAIIVSNGKLIVEKQKFPPNLTIAIARIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M0</accession>
    <name>A0A087S0M0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Translation initiation factor 2 subunit gamma protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">eif2g</name>
        <name evidence="7" type="ORF">AAA799P11_00792</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19274">
        <property type="protein sequence ID" value="KFM19274"/>
        <property type="gene ID" value="AAA799P11_00792"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.763"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01888">
        <property type="entry name" value="eIF2_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03688">
        <property type="entry name" value="eIF2_gamma_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15490">
        <property type="entry name" value="eIF2_gamma_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015256">
        <property type="entry name" value="eIF2g_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044127">
        <property type="entry name" value="eIF2g_dom_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044128">
        <property type="entry name" value="eIF2g_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022424">
        <property type="entry name" value="TIF2_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09173">
        <property type="entry name" value="eIF2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="SSF50465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03680">
        <property type="entry name" value="eif2g_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="6">
        <location>
            <begin position="18"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="420" mass="45243" checksum="882F31CFB634F361" modified="2014-10-29" version="1">MHWRDTLPDWYIEKYGYQPCVNIGTAGHVDHGKTTLIQALTGSWTSVHSQELKRGITIRVGYSDAAFYKCKNCEEPLGYSTTPKCNNCGGESELSRVVSFVDSPGHESLMANMLSGSALMDGALLLVAANEKVPKPQTKEHLLALQTLGIQQIVVVQNKVDLLSYKEALANYQDITKFVKGTHAAKAPIIPISAQSGLNIDALIGSIESSIKTPDRDEKQDTVMHVLRSFDVNKPGTKLKNIKGGVIGGSLTQGIFNIGDEIEIKLGILNEKKKTYEPLVTEITSLGTAAGIVESVKPGGLVAIGTKLDPSMTRSDSFIGSVIGKPGTLPENSTKLKLDVTLFDSAVGTTEDIKVQPIQTGELLRVNIGTAPLLGKVSKVKSKNVEIELRRPACIFEGGNVALSRRIDERWRLIGAGIVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S108</accession>
    <name>A0A087S108_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycolate oxidase subunit GlcD protein</fullName>
            <ecNumber evidence="2">1.1.2.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glcD</name>
        <name evidence="2" type="ORF">AAA799P11_00736</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.2.4" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19412">
        <property type="protein sequence ID" value="KFM19412"/>
        <property type="gene ID" value="AAA799P11_00736"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.709"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004458">
        <property type="term" value="F:D-lactate dehydrogenase (cytochrome) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004113">
        <property type="entry name" value="FAD-linked_oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016171">
        <property type="entry name" value="Vanillyl_alc_oxidase_C-sub2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02913">
        <property type="entry name" value="FAD-oxidase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="1">
        <location>
            <begin position="33"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="481" mass="54314" checksum="E16322A3A481B01E" modified="2014-10-29" version="1">MNSVETQLSKVIQGEIHTENQFRKFYSVDASSYQVIPKIIVIPKNEKDVINTIKIARKFKTSVTVRGAGTGLVGSALNRGIILDMKNFDSIKIKKNYAIVGPGVIKGALDRVLEKNKKFFPPNPSIGAFCSIGGMLGNNSSGSRSLKYGSIIDNVIEVTIIDGNGNKIILPKDKNFSNKIQKKIKINSKKIPNVSKSSSGYRIDKILSKNDSHKIIIGSEGTLGIVTSAKLKIKNIPKKRILFVIEYNSIKNAIKDCIFVNNTNPSAIEFVDKITLQQINHKFQRNTKCLLFVEYDEKINQNDKKMKSLISGKIVKKLTKKQDVEQWWKYRDSSLFYSLKNIKKENRIPHVIEDAAVPIERLTELFSILEKISKKFKTKSIVYGHIGNGNLHVRLIGERKKPSLIKNIATYYFDEIIKIGGTITAEHGDGLARSEFIKKQYGKTNYQTFQEIKKLFDPKNILNTGKIISEKSTIIKNFEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S110</accession>
    <name>A0A087S110_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00738</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19414">
        <property type="protein sequence ID" value="KFM19414"/>
        <property type="gene ID" value="AAA799P11_00738"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.711"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="12284" checksum="E1FA5970DD6E59EE" modified="2014-10-29" version="1">MPVDESLLKSLIDFTESDSLQFTLHLKDHSYPLNHVHVSHSTIPVNKPTTRGGVYFSDKFAYKMKGTVEDLSIVPLLTKKMLGPNTEFGELTIKTSIDVGGTKKNLYKSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S115</accession>
    <name>A0A087S115_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00743</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19419">
        <property type="protein sequence ID" value="KFM19419"/>
        <property type="gene ID" value="AAA799P11_00743"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="178" mass="20399" checksum="40FE0412A0BA804E" modified="2014-10-29" version="1">MGKELFPRYAKRNKERQKEEGSKFGRGIKKETLVANKTKDKQDDSKRTSAQVGKAVNLSHLRNISLEKKIETQVTDLLQNTFSFKYLIIQGQEKRMGSSGIESRLIGTVSECKECQPSINWLGNNSPKSKIRDSGLWLYQHLSNPPISESDKKDLVIFHKHTKEWFNSQSISNTNETQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S116</accession>
    <name>A0A087S116_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00744</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19420">
        <property type="protein sequence ID" value="KFM19420"/>
        <property type="gene ID" value="AAA799P11_00744"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11915" checksum="4C5CF908DF25E2A5" modified="2014-10-29" version="1">MKKFDTFWAELQTQLRTPKKIKNWTVKKGNFGEDFMAQVSTKNRILCTTMKGSENHASRKDFELVYSNWEGYKSETIPRNQFTQSFVTKYTISIIRQFMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S118</accession>
    <name>A0A087S118_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative type-1 restriction enzyme MjaXP specificity protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00746</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type-I restriction system S methylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19422">
        <property type="protein sequence ID" value="KFM19422"/>
        <property type="gene ID" value="AAA799P11_00746"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.719"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.220.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000055">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044946">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01420">
        <property type="entry name" value="Methylase_S"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0680">Restriction system</keyword>
    <feature type="domain" description="Methylase_S" evidence="5">
        <location>
            <begin position="21"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="domain" description="Methylase_S" evidence="5">
        <location>
            <begin position="284"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="406"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="443" mass="50589" checksum="52991B9E37B5FF07" modified="2014-10-29" version="1">MSLKKGYKSVPWLFGKEIEIPEEWEVKCLNETGDLINGLNKDKEDYGHGCLHVNINNIFESFSIIPERLGRVNATEKEIDTYALQKGDICLLRSSVKREGVGYPALFNEDNNSIVFSGFIIRFRPNKIWFSIYLTFLLRSELMRNIIVSKSSSSANTNINQKSLGSILIIIPPLSEQQKIATILSNVDNLIESTEMVITNSKKVKKGLMQKLLTRGIGHKKFKNTYLKYRFLKISIPEENVIKNVKQISTLDNNAVKTGPFGLMLHSSDYVSQGTPLILVKNIQRGHIVDSDIPKISEKDVERLSDYRVKEDDVIFTRVGRVGSSALVKKTQVGWLFSGQTLRIRFENPELNIKYVNYYFQSELFTRLLIPELLGSTRDSINTKILEEIPIILPSKNEQDKIVIILSNIDSKIESQEKYKEKLERLKKSLMQKLLTGEVRVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S124</accession>
    <name>A0A087S124_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00752</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19428">
        <property type="protein sequence ID" value="KFM19428"/>
        <property type="gene ID" value="AAA799P11_00752"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="7406" checksum="2A0242AF1105CB8F" modified="2014-10-29" version="1">MSYATELLKDIRCNLCLKYNRNHKSKIYKTKRIIFHLRTAHTDVPTYLIDNEIRKIKELIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S125</accession>
    <name>A0A087S125_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phage-plasmid primase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00753</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19429">
        <property type="protein sequence ID" value="KFM19429"/>
        <property type="gene ID" value="AAA799P11_00753"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006500">
        <property type="entry name" value="DNA_primase_phage/plasmid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045455">
        <property type="entry name" value="DUF5906"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014015">
        <property type="entry name" value="Helicase_SF3_DNA-vir"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014818">
        <property type="entry name" value="Phage/plasmid_primase_P4_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08706">
        <property type="entry name" value="D5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19263">
        <property type="entry name" value="DUF5906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01613">
        <property type="entry name" value="primase_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51206">
        <property type="entry name" value="SF3_HELICASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF3 helicase" evidence="2">
        <location>
            <begin position="288"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="595" mass="70418" checksum="890387405E7031F8" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S139</accession>
    <name>A0A087S139_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00767</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19443">
        <property type="protein sequence ID" value="KFM19443"/>
        <property type="gene ID" value="AAA799P11_00767"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.740"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="192" mass="22643" checksum="1CF418882E91D4BB" modified="2014-10-29" version="1">MSQAEPTLMMYERERILLEYIKENPSLHHNALLKLVVPKFMAKTTFEKTRDSLIDKEIIYTNTEKNMKFYHVTENYARKAAQHIEQTTNNSFHDLKIQIKRLETDFPHKDIDEKIHTSNSLLHRLLQTDNGFTILDSIKNPKKTLYRDEHLTIQQLIFQVYETIQNDKDSELLIPTITSFLGVIVPKNSLEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S142</accession>
    <name>A0A087S142_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19446">
        <property type="protein sequence ID" value="KFM19446"/>
        <property type="gene ID" value="AAA799P11_00770"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.743"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="16065" checksum="92120B28F2F2D846" modified="2014-10-29" version="1">MTEKVWMGAIFLKDEGGYEILLKSLEHYKKRLRTIGQSPELKDSAAMFASVLNQQAMKTVPKIDEVVEKIKNSINDIQAVKNLSDEIPFFEKALMCYESDIDKAQNTGHEYFVKLVGDLSEVKNDLSTIKTALKKIKEYSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S195</accession>
    <name>A0A087S195_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutamate-1-semialdehyde 21-aminomutase 2 protein</fullName>
            <ecNumber evidence="3">5.4.3.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hemL2</name>
        <name evidence="3" type="ORF">AAA799P11_00700</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.3.8" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19499">
        <property type="protein sequence ID" value="KFM19499"/>
        <property type="gene ID" value="AAA799P11_00700"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.670"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042286">
        <property type="term" value="F:glutamate-1-semialdehyde 2,1-aminomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="435" mass="48095" checksum="C036856FB256C6D6" modified="2014-10-29" version="1">MNLLLDYIKEYKKKTPTSAKLFAKSAKLHVNGVSHNIRFYEPYPFVVKKSLGKNLVDVDGNKYTDYWMGHWALILGHGPKSVRKNLQKQIERSWMYGTVNEQTILLSELISKAVPVAEKIRYVTSGTEATMYAVRLARSMTGKKVIAKIDGGWHGYTSDLLKSVNWPFSESESSGMVNEEQIVSIPYNDLENSLSILRKYSKDLAGVIIEPVLGGGGCIPAESDYLKGVQEFCKKNNSLFILDEIVTGFRFRYGCLYPTMKLDPDIVTLGKIVGGGMAIGVMCGKKEIMEFADTTGKKKSERSYVGGGTFSANPASMVAGYSTLNHLKSKKSVYTKINDLGEHARKELTKVFDGKVAVTGKGSLFMTHFLQNGITEIKNSTDAAKCNGALLSKYHFKMISHDGIFFLLGKLGAISDAHSKSDIKNMVKASEEFTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S197</accession>
    <name>A0A087S197_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Restriction endonuclease protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00702</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19501">
        <property type="protein sequence ID" value="KFM19501"/>
        <property type="gene ID" value="AAA799P11_00702"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="235" mass="27456" checksum="A0A9F2EBA4E4CBFF" modified="2014-10-29" version="1">MKKVKSEVYRDMTSNDIYKKVLHAISEEKGLKALHQRYQLKNAIMKMGPAGFTFENYVAAILEYYDFQVTGIRSKIKGECITHEIDLIGLKRNKKFLIECKYHSKHGVYTGLKESMYTHARFLDMRSKFSGEMIFCNTKVSGNAKKYAKCVGQEIISWRYPAKNSLEKMIEIHNLYPITILNLSQKELEIFSESNIMIAQDLLRYDSHQISKMTGISQKRIYNLQQLVEKIFNIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A1</accession>
    <name>A0A087S1A1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00706</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19505">
        <property type="protein sequence ID" value="KFM19505"/>
        <property type="gene ID" value="AAA799P11_00706"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.676"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018649">
        <property type="entry name" value="SHOCT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09851">
        <property type="entry name" value="SHOCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SHOCT" evidence="1">
        <location>
            <begin position="91"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="120" mass="13252" checksum="2A99A52739CA8D37" modified="2014-10-29" version="1">MAAKKTGYIEKFLKKADKALQEGVKRADEVLEDAVEFGTMTAKQAAQASKELRSQAKKERVELKKRGVKKITEGITAAKNVTSSTEDDLATLEKLGKLRKSGVITEKEFQAKKKKILGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A5</accession>
    <name>A0A087S1A5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HIT-like protein HinT</fullName>
            <ecNumber evidence="3">3.6.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hinT</name>
        <name evidence="3" type="ORF">AAA799P11_00710</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.17" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19509">
        <property type="protein sequence ID" value="KFM19509"/>
        <property type="gene ID" value="AAA799P11_00710"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.680"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004081">
        <property type="term" value="F:bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001310">
        <property type="entry name" value="Histidine_triad_HIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011146">
        <property type="entry name" value="HIT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23089">
        <property type="entry name" value="PTHR23089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01230">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00332">
        <property type="entry name" value="HISTRIAD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="SSF54197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51084">
        <property type="entry name" value="HIT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HIT" evidence="2">
        <location>
            <begin position="4"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Histidine triad motif" evidence="1">
        <location>
            <begin position="94"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="14811" checksum="6D2271CC68D0DF23" modified="2014-10-29" version="1">MDCIFCKIIAKEIPCKILGETSSSISFLDAFPLAKGHVLVIPKNHHQKIQDMSNDENADLFSLVHKMISKVDSITGATLVAVHNGKEAGQEVPHVHVHLVPRSSDDSASAIHSMFDGALKLPESEINELYEKLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C1</accession>
    <name>A0A087S1C1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00726</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19525">
        <property type="protein sequence ID" value="KFM19525"/>
        <property type="gene ID" value="AAA799P11_00726"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.698"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="125" mass="14153" checksum="1EC40EE92E3C046E" modified="2014-10-29" version="1">MQDPNPMPWGALDRYQAHFIVRKDTGRNVGNFVAKTQLQTRGHFASKTVESVSWNGPGALAEKLNHDSELNEMIAKQSVKDTTIYVEPTENAVRIRSKWDNHLAFGITKDLFDIYDRIAGHIKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C6</accession>
    <name>A0A087S1C6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ribbon-helix-helix protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00731</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19530">
        <property type="protein sequence ID" value="KFM19530"/>
        <property type="gene ID" value="AAA799P11_00731"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="14488" checksum="D1BE16F9D785B3E4" modified="2014-10-29" version="1">MEMIKKMRKTESRTITFSKNLLQTLDELIEKEVILSLSVFVSEAVKEKLEHDLIELEESKNRLDVVVNRFTTHRSVYVDDFEDVSVKELEEFTKSMKRLLRYKTAMEEIESKPPSKSGLNEFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F3</accession>
    <name>A0A087S1F3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">L-2,4-diaminobutyric acid acetyltransferase</fullName>
            <ecNumber evidence="4">2.3.1.178</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ectA</name>
        <name evidence="7" type="ORF">AAA799P11_00546</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + L-2,4-diaminobutanoate = (2S)-4-acetamido-2-aminobutanoate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16901"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:58761"/>
            <dbReference type="ChEBI" id="CHEBI:58929"/>
            <dbReference type="EC" id="2.3.1.178"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amine and polyamine biosynthesis; ectoine biosynthesis; L-ectoine from L-aspartate 4-semialdehyde: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the acetyltransferase family. EctA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.178" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19557">
        <property type="protein sequence ID" value="KFM19557"/>
        <property type="gene ID" value="AAA799P11_00546"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.530"/>
    <dbReference type="UniPathway" id="UPA00067">
        <property type="reaction ID" value="UER00122"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033816">
        <property type="term" value="F:diaminobutyrate acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019491">
        <property type="term" value="P:ectoine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012772">
        <property type="entry name" value="Ectoine_EctA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02406">
        <property type="entry name" value="ectoine_EctA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="6">
        <location>
            <begin position="4"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="167" mass="18834" checksum="F343756A0CA742B2" modified="2014-10-29" version="1">MTSIIYREPILSDAHKIWELVKNNKPLDENSKYLYVLLCHQFSKTCRVAECDSKIVGFLSGFISPKNPDTLFVWQAAVDDTFRNKGIAKELVFQTLRNTDSDVKFVEATVTPSNDASLKFLQNFANQVGTKITKNPLFSTDVLGEGHEPEDLVRIGPIQKNILEVTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F8</accession>
    <name>A0A087S1F8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Translation initiation factor 1A protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00551</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19562">
        <property type="protein sequence ID" value="KFM19562"/>
        <property type="gene ID" value="AAA799P11_00551"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.535"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1-like" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4767" checksum="F2650390749DA925" modified="2014-10-29" version="1">MVIIAPWEFGKEGRGDILWRYTLPQVEWLKQEKYIPLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G1</accession>
    <name>A0A087S1G1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Zinc finger CDGSH-type domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00554</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19565">
        <property type="protein sequence ID" value="KFM19565"/>
        <property type="gene ID" value="AAA799P11_00554"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.538"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043231">
        <property type="term" value="C:intracellular membrane-bounded organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.5.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018967">
        <property type="entry name" value="FeS-contain_CDGSH-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042216">
        <property type="entry name" value="MitoNEET_CISD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09360">
        <property type="entry name" value="zf-CDGSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00704">
        <property type="entry name" value="ZnF_CDGSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ZnF_CDGSH" evidence="3">
        <location>
            <begin position="11"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="58" mass="6436" checksum="63A5434088AC7767" modified="2014-10-29" version="1">MANVKIKAAKNGPLLVEVDDKTTVTLCRCGRSQTQPSCDGTHEKIDFKAEEFEIKVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H0</accession>
    <name>A0A087S1H0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative [LysW]-aminoadipate/[LysW]-glutamate kinase</fullName>
            <ecNumber evidence="2">2.7.2.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">argB</name>
        <name evidence="2" type="synonym">lysZ</name>
        <name evidence="4" type="ORF">AAA799P11_00563</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[amino-group carrier protein]-C-terminal-N-(1,4-dicarboxybutan-1-yl)-L-glutamine + ATP = [amino-group carrier protein]-C-terminal-N-(1-carboxy-5-phosphooxy-5-oxopentan-1-yl)-L-glutamine + ADP</text>
            <dbReference type="Rhea" id="RHEA:41944"/>
            <dbReference type="Rhea" id="RHEA-COMP:9694"/>
            <dbReference type="Rhea" id="RHEA-COMP:9712"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:78499"/>
            <dbReference type="ChEBI" id="CHEBI:78503"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[amino-group carrier protein]-C-terminal-gamma-(L-glutamyl)-L-glutamate + ATP = [amino-group carrier protein]-C-terminal-gamma-(5-phospho-L-glutamyl)-L-glutamate + ADP</text>
            <dbReference type="Rhea" id="RHEA:52632"/>
            <dbReference type="Rhea" id="RHEA-COMP:13311"/>
            <dbReference type="Rhea" id="RHEA-COMP:13313"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:136714"/>
            <dbReference type="ChEBI" id="CHEBI:136717"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-arginine biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-lysine biosynthesis via AAA pathway; L-lysine from L-alpha-aminoadipate (Thermus route): step 2/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the acetylglutamate kinase family. LysZ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.17" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19574">
        <property type="protein sequence ID" value="KFM19574"/>
        <property type="gene ID" value="AAA799P11_00563"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.547"/>
    <dbReference type="UniPathway" id="UPA00033">
        <property type="reaction ID" value="UER00036"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043744">
        <property type="term" value="F:N2-acetyl-L-aminoadipate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042450">
        <property type="term" value="P:arginine biosynthetic process via ornithine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019878">
        <property type="term" value="P:lysine biosynthetic process via aminoadipic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02082">
        <property type="entry name" value="LysZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004662">
        <property type="entry name" value="AcgluKinase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037529">
        <property type="entry name" value="LysZ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000728">
        <property type="entry name" value="NAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00761">
        <property type="entry name" value="argB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="3">
        <location>
            <begin position="4"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="37"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="2">
        <location>
            <position position="5"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="2">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="267" mass="28549" checksum="2449BF4FB79DC336" modified="2014-10-29" version="1">MITIKIGGSVVDDLHASTIADIKKVAESEGVILVHGGGKEVTKVCEQLGKEPKFVTSPSGIKSRYTDKETAEIFTMVMSGRINKTIVQMLQKNGINAIGLSGVDAKVIQADRKKKLLIVNEKGRKQAIDGGYTGKIREVNASFIKSLLDQGLTPVISPIAISEESEFLNVDGDRAAAYVAGKVGSDKVLFITNVDGLLMDDKVVPKLTLAEAKEIRPKIGPGMEKKILASTEALDMGVEKALIANGQKENPISSAIAHDNCTVIEHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K4</accession>
    <name>A0A087S1K4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">DNA repair and recombination protein RadA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">radA</name>
        <name evidence="10" type="ORF">AAA799P11_00597</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the eukaryotic RecA-like protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19608">
        <property type="protein sequence ID" value="KFM19608"/>
        <property type="gene ID" value="AAA799P11_00597"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.581"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01123">
        <property type="entry name" value="Rad51_DMC1_radA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00348">
        <property type="entry name" value="RadA_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013632">
        <property type="entry name" value="DNA_recomb/repair_Rad51_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011938">
        <property type="entry name" value="DNA_recomb/repair_RadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016467">
        <property type="entry name" value="DNA_recomb/repair_RecA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010995">
        <property type="entry name" value="DNA_repair_Rad51/TF_NusA_a-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033925">
        <property type="entry name" value="Rad51_DMC1_RadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020587">
        <property type="entry name" value="RecA_monomer-monomer_interface"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08423">
        <property type="entry name" value="Rad51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005856">
        <property type="entry name" value="Rad51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47794">
        <property type="entry name" value="SSF47794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02236">
        <property type="entry name" value="recomb_radA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50163">
        <property type="entry name" value="RECA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RECA_2" evidence="8">
        <location>
            <begin position="84"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="RECA_3" evidence="9">
        <location>
            <begin position="260"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="320"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="335"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR005856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="388" mass="42535" checksum="8AE2EB93E2D6FCB9" modified="2014-10-29" version="1">MVEDLRLDSLEGVGPVTTRKLSDAGVHNVMDLIVRGPVEIAEITGMEKDTAEKIVNKARQHLVDGGLIAKHFTSASEIYKHRQSIGKITTGTNCLDTLFDGGLETQALTEVYGEFGCGKTQFAHTMSVMVQKTKEEGGLEGSVLYIDTENTFRPERIVSIAQAHEMDPEKVLDNIIVARAYNSAHQTLILEEAGPIIEENNIKLIVADSAVGLFRSEYLGRGTLSNRQQKLNHFVHLLSRIAETYNCAAIATNQVMASPDVFFGDPTRPIGGNVVAHTSTYRIYFKKSGKKRIARMVDSPHHPEEEVIFALGEAGVIDPEDAEKKTKKTTKKVATKKAKEPEVEAKVETPEESTETPDVEAPAETPETETVEAPPVDAKVDDSEPVEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K6</accession>
    <name>A0A087S1K6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00599</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19610">
        <property type="protein sequence ID" value="KFM19610"/>
        <property type="gene ID" value="AAA799P11_00599"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="93"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="15953" checksum="B13DE8212933198C" modified="2014-10-29" version="1">MNLDSINTKSKISLYKRNPQQEKALQIINDIKNKKIQLKPTTDAHIQICNNLRELIDRYNRFHNLSFIAKYVIRAYDDAEFYGLIEKTESGKITELESDISEKDKEILRLKKQLAKYEGDDKPDDRLYSDLEEKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K9</accession>
    <name>A0A087S1K9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00602</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19613">
        <property type="protein sequence ID" value="KFM19613"/>
        <property type="gene ID" value="AAA799P11_00602"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="99" mass="11615" checksum="EB9E1D7FA2ECD34A" modified="2014-10-29" version="1">MAKNPKPYWKLGKVPSFKTDFLKLTPYGQWVIGRTIERMLYLKEPQKTYRYTNCDDCMPDLFLFGVLDDGIGNKGLELQIYLDKKRKVLAPITVRKAKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M1</accession>
    <name>A0A087S1M1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosomal RNA large subunit methyltransferase E</fullName>
            <ecNumber evidence="2">2.1.1.166</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">23S rRNA Um2552 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">rRNA (uridine-2'-O-)-methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">rlmE</name>
        <name evidence="5" type="ORF">AAA799P11_00614</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>S-adenosyl-L-methionine + uridine(2552) in 23S rRNA = 2'-O-methyluridine(2552) in 23S rRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42720"/>
            <dbReference type="Rhea" id="RHEA-COMP:10202"/>
            <dbReference type="Rhea" id="RHEA-COMP:10203"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74478"/>
            <dbReference type="EC" id="2.1.1.166"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.166" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19625">
        <property type="protein sequence ID" value="KFM19625"/>
        <property type="gene ID" value="AAA799P11_00614"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.601"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004180">
        <property type="term" value="F:carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008650">
        <property type="term" value="F:rRNA (uridine-2'-O-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01547">
        <property type="entry name" value="RNA_methyltr_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015507">
        <property type="entry name" value="rRNA-MeTfrase_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005461">
        <property type="entry name" value="23S_rRNA_mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 2 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="2 3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FtsJ" evidence="4">
        <location>
            <begin position="20"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2 3">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR005461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="197" mass="22299" checksum="6ED5EC773EDCD6E3" modified="2014-10-29" version="1">MKLLDARKDHYRKLAHEQGFRSRAAYKLKELNQSYRIIGPGFYVLDLGCAPGGWTQMAVKLAGNQGKVMGVDLSYVEEIPGAHILRGDIEDENVVDEVMDYFGRKVNAVICDLSPKVSGNWSVDHAKQISLNYDCTKIMDKVLAHKGNAVFKVFDGEYSMEFRDYIKKKFARINLTKPKASRKQSSELYYVCLGFTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S6</accession>
    <name>A0A087S1S6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Winged helix-turn-helix protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00674</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19680">
        <property type="protein sequence ID" value="KFM19680"/>
        <property type="gene ID" value="AAA799P11_00674"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.659"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038723">
        <property type="entry name" value="ArnR1-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14947">
        <property type="entry name" value="HTH_45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_45" evidence="1">
        <location>
            <begin position="4"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="10281" checksum="7B3D6BD56A833AAA" modified="2014-10-29" version="1">MTSYRTSMQIVADLLTVTEQSGQEGIKTTSLLTKANLSHSRLSKFLENLTGAGLINKIEFDGKNTFVITPKGRQYLESYVNFSSIAESFGLEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W5</accession>
    <name>A0A087S1W5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00459</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19719">
        <property type="protein sequence ID" value="KFM19719"/>
        <property type="gene ID" value="AAA799P11_00459"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.439"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="186" mass="22394" checksum="9BA5FBD91AB7B254" modified="2014-10-29" version="1">MHPVITEIFSNDKNADSFFLWVSNRVKEKKSLEEFFSWHLEVISEVINEIDVTKEINFLDKKEANKWAIEFLKNYDKKIRKMRNASNQIFERFHELKIEFNEIISKENKFQKESKNAMQVFLNKEELLVGKIIFSYREIWFVANQITNSDFKLGSIGKYQKWVEENYSNLKKVKDTLQHIEKEISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W8</accession>
    <name>A0A087S1W8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PAC2 domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00462</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19722">
        <property type="protein sequence ID" value="KFM19722"/>
        <property type="gene ID" value="AAA799P11_00462"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.442"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10900">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019151">
        <property type="entry name" value="Proteasome_assmbl_chaperone_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038389">
        <property type="entry name" value="PSMG2_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09754">
        <property type="entry name" value="PAC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="224" mass="25490" checksum="A73D223428391161" modified="2014-10-29" version="1">MDFKQEPDVEKPIIIAAMQDMGNVGSIVINFINESLKTKTFRVSKTPFPTYVVDRGGYIDLPYESWEYKYTEDLIVFGGGKGQPQNTSELNALCQDVIDVAKKYSAKFIYTFGGFHTNRHYKNNPKTYITTTSRELTKQMEGLGVDITPQKSIITGFNGLILGFAKKNEIHGIGMYGELNEPEIPQYRAAISIIKTLEKLTYRKFGDTSRLEIMAQEIERKFKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X3</accession>
    <name>A0A087S1X3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00467</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19727">
        <property type="protein sequence ID" value="KFM19727"/>
        <property type="gene ID" value="AAA799P11_00467"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.448"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11936" checksum="9FFF8418D1C1F171" modified="2014-10-29" version="1">MVKNGKSNTKNLFDPDELVLTKSEIIEFCDRVIKKWNKNPTKNAKNILAMNAVKTSVLWTDDESLKAIWSEIIAWTFELLYENAMAKDEEWTNMLKKLKNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z1</accession>
    <name>A0A087S1Z1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acetyl-coenzyme A synthetase protein</fullName>
            <ecNumber evidence="7">6.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00490</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.1" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19745">
        <property type="protein sequence ID" value="KFM19745"/>
        <property type="gene ID" value="AAA799P11_00490"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.468"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003987">
        <property type="term" value="F:acetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016208">
        <property type="term" value="F:AMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019427">
        <property type="term" value="P:acetyl-CoA biosynthetic process from acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011904">
        <property type="entry name" value="Ac_CoA_lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032387">
        <property type="entry name" value="ACAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16177">
        <property type="entry name" value="ACAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02188">
        <property type="entry name" value="Ac_CoA_lig_AcsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACAS_N" evidence="6">
        <location>
            <begin position="21"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding" evidence="4">
        <location>
            <begin position="71"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="5">
        <location>
            <begin position="514"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="630" mass="70144" checksum="791CF38D152CAB99" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S200</accession>
    <name>A0A087S200_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Thiosulfate dehydrogenase quinone large subunit protein</fullName>
            <ecNumber evidence="6">1.8.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00499</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.5.2" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19754">
        <property type="protein sequence ID" value="KFM19754"/>
        <property type="gene ID" value="AAA799P11_00499"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.477"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043831">
        <property type="term" value="F:thiosulfate dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032808">
        <property type="entry name" value="DoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07681">
        <property type="entry name" value="DoxX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="53"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="80"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="139" mass="14490" checksum="87BEA830FC42EDCD" modified="2014-10-29" version="1">MATSEISKRSLVDISFMGLRSSIGVIFIVAGMSKLGNPGFGGFLSSLGLPPEMHIPIALAELIPGILLIIGVLSRISSSLISIIMLGAIFLVKEAQSLTGDGGYRIDLILLAACLVIVAGGPGRVSLSHIVKKLPRCLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S210</accession>
    <name>A0A087S210_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00509</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19764">
        <property type="protein sequence ID" value="KFM19764"/>
        <property type="gene ID" value="AAA799P11_00509"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.490"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="169" mass="19385" checksum="7B75BA6F55EBDD52" modified="2014-10-29" version="1">MTKTSDEMKNLVEEFIKVTNINYEDQTDKVKEKSNLIEWQFRVGTNVIVSKNTNRADRIHLNVNMRFPPEDAKLLVMKNPSFSKAVMDISEICTICNVGHQWVKDKENIAGLAIFSHVDEQILDRVSFHDTWDNVARVTAHIQKILRSNFSGFSGQTSSEETTEKSMYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S298</accession>
    <name>A0A087S298_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 6 9">Phosphoglycerate kinase</fullName>
            <ecNumber evidence="1 6 9">2.7.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">pgk</name>
        <name evidence="10" type="ORF">AAA799P11_00381</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6 9">
            <text>(2R)-3-phosphoglycerate + ATP = (2R)-3-phospho-glyceroyl phosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:14801"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57604"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6 9">Belongs to the phosphoglycerate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.3" evidence="1 6 9"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19852">
        <property type="protein sequence ID" value="KFM19852"/>
        <property type="gene ID" value="AAA799P11_00381"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.370"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004618">
        <property type="term" value="F:phosphoglycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1260">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00145">
        <property type="entry name" value="Phosphoglyc_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001576">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015911">
        <property type="entry name" value="Phosphoglycerate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015824">
        <property type="entry name" value="Phosphoglycerate_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036043">
        <property type="entry name" value="Phosphoglycerate_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11406">
        <property type="entry name" value="PTHR11406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00162">
        <property type="entry name" value="PGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000724">
        <property type="entry name" value="Pgk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00477">
        <property type="entry name" value="PHGLYCKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53748">
        <property type="entry name" value="SSF53748"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00111">
        <property type="entry name" value="PGLYCERATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="4 6 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 9" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6 7">
        <location>
            <begin position="21"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6 7">
        <location>
            <begin position="59"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 8">
        <location>
            <position position="325"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 8">
        <location>
            <begin position="351"/>
            <end position="354"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000724-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000724-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="402" mass="44034" checksum="8CE8F05F206C6EF5" modified="2014-10-29" version="1">MKVLTLDDFDLKGKTVFLRVDMNCPIDPETMEISGTKRIEEAIETLQSLKDAKVVVASHQGRVGNNDYTGMDKHAKVLEKLMNREIKYVEDVIGEAAQNAIKNLENGDILLLDNLRLCAEENYEFTPENAVKTIMVTRLAKLFDLCVLDSFPSAHRSHPSIVGFPQVLPACAGRIVEREVRNLDEIMTVAKAPHVIVLGGSKVPDRLEAIKLLIQNGRADHVLLTGLIGNVFMRAQARVKSSLGIKREEEVVAKAHTLIGEYPDVFATPVDIAIDKDGERIEMDVREMGKGDKIFDLGPKTVEYYSKLIAGAGTVFISGPAGFFEKENFSFGTKALLTAVANSMATTIVSGGHLTTALKQQGLADKINHISTAGGALVLYLTGEKLPMIKALEDARIRHQSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E1</accession>
    <name>A0A087S2E1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00434</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19895">
        <property type="protein sequence ID" value="KFM19895"/>
        <property type="gene ID" value="AAA799P11_00434"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.414"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="148" mass="16537" checksum="528C774567BCA862" modified="2014-10-29" version="1">MQLEYWLGLGSIAFFVLFVLVVSSLYFFMFDDPNTSDLPIDPDNFANPKLLQFISITIAPGGILAAVTFILSKYYGSKKIGAMLIVDGIILLAGMAFSQTLIDKIAEPYITDTVLILPPLFMALSAPVIYFGLRLMKVRKPRPKKEYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E3</accession>
    <name>A0A087S2E3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional protein GlmU</fullName>
            <ecNumber evidence="2">2.7.7.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00436</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.13" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19897">
        <property type="protein sequence ID" value="KFM19897"/>
        <property type="gene ID" value="AAA799P11_00436"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.416"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004475">
        <property type="term" value="F:mannose-1-phosphate guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="235" mass="26757" checksum="C1681A5771CC8D5F" modified="2014-10-29" version="1">MKAVILAGGLGTRLRPLTLKTPKPMLPLGKKPILEHLIDWNKKNGIKSIVLCVSYRKEKIQNYFKDGKEFGVEIEYAISKKPLATAGQLKTAEVFIDDTFVCVYGDSIFDFSLRNMIKQHKARKAFTTMSLYEYKTNLEYGVINTSKTGKVTSWEEKPEIKANINMGCYVMEPGILKYIPKNKPYGMDDVIKKAMKNKKLVSSFITKKGFMDIGNKESYKQANEEFAKKSRKGQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2F3</accession>
    <name>A0A087S2F3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 10">Shikimate kinase</fullName>
            <shortName evidence="10">SK</shortName>
            <ecNumber evidence="5 10">2.7.1.71</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">aroK</name>
        <name evidence="13" type="ORF">AAA799P11_00446</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + shikimate = 3-phosphoshikimate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13121"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.71"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 5/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the GHMP kinase family. Archaeal shikimate kinase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.71" evidence="5 10"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19907">
        <property type="protein sequence ID" value="KFM19907"/>
        <property type="gene ID" value="AAA799P11_00446"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.427"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00088"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004765">
        <property type="term" value="F:shikimate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00370">
        <property type="entry name" value="Shik_kinase_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010189">
        <property type="entry name" value="SK_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20861:SF3">
        <property type="entry name" value="PTHR20861:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005758">
        <property type="entry name" value="Shikimt_kin_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01920">
        <property type="entry name" value="Shik_kin_archae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GHMP_kinases_N" evidence="11">
        <location>
            <begin position="78"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP_kinases_C" evidence="12">
        <location>
            <begin position="224"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="85"/>
            <end position="95"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM19907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="284" mass="30144" checksum="5A6D7908052DD690" modified="2014-10-29" version="1">MAKAKATVHGAVSIVNAIANQKGATLGIDLKVEATVETSPGKGIVIQSENKTLSSRLINKTVEKIVSKKDLDQNKITITLESEIPTGYGLKSSSAISSAVALGCAKIFKSKFTDQQILLAGVDASIESKVSITGAYDDACSCYYGGFNVTDNAKKKRISYEKGPSNLIAVIFIPKNRKRGNLKKLKVLSSVFDHAWNLARKSNYWEAMIINGLATASILSSNPETITGLIERGALGASVSGNGPAIAAITKKENEANIKKAFSTLEGNTIVSKVSNKKAEVHEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L3</accession>
    <name>A0A087S2L3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SNF7 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00271</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19967">
        <property type="protein sequence ID" value="KFM19967"/>
        <property type="gene ID" value="AAA799P11_00271"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.265"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007034">
        <property type="term" value="P:vacuolar transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005024">
        <property type="entry name" value="Snf7_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03357">
        <property type="entry name" value="Snf7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="216" mass="23549" checksum="9121FEFC7AB4C57C" modified="2014-10-29" version="1">MLSNSWNKTQGESISQKVMGKVKPDEPLKNKIDFAQKKLQFQISKLEGINEKLKVKHDQIFEKIVNAHKNNKNAYAQAYANELAQVRKMKNMVSGAKLSMEQVKLRLDTVSELGDVVVTLSPCMSIIKGLAPSLNGIMPEANASMQDLSSILGDVMSGSSVELGDTMSVGTETNADTLAILEEAQGVITGQTKASIPDVPDSLKQQIVERKSDVFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q6</accession>
    <name>A0A087S2Q6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20010">
        <property type="protein sequence ID" value="KFM20010"/>
        <property type="gene ID" value="AAA799P11_00315"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.308"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="279" mass="32835" checksum="42A50A105B0D09CF" modified="2014-10-29" version="1">MRLGTRSPNEFIQLLNKKNDTIQKSFLAKVTEMTKMVDIKVMLGDATVSEQKTFDPKLIMDYFQNMGKNLKDWSTQDVTITNNEDVRRIFMKFEIMEGNYLISGHVSIQFHVLLYYKPIQRVIDCQKELSEIIDMTKTKEEELSNNSDQYVLDKLKEMGYKDFDHQKLFEVFYENDEFREKVFSEIEKQSGVDFQKLSEKKTQLFNELDSLLVETYQTTPTLIDDSKLVTGEEGCLCTFDLEFVKNNTREGLFDPRKMSDTTKENITKRLDDFRNILNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X9</accession>
    <name>A0A087S2X9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Alg9-like mannosyltransferase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">AAA799P11_00154</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20083">
        <property type="protein sequence ID" value="KFM20083"/>
        <property type="gene ID" value="AAA799P11_00154"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005599">
        <property type="entry name" value="GPI_mannosylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03901">
        <property type="entry name" value="Glyco_transf_22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="145"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="174"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="227"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="264"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="316"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="350"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="378"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="407"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="481"/>
            <end position="506"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="524" mass="60120" checksum="B820E50907350AEA" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z8</accession>
    <name>A0A087S2Z8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Probable phosphoheptose isomerase</fullName>
            <ecNumber evidence="9">5.3.1.28</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Sedoheptulose 7-phosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gmhA</name>
        <name evidence="11" type="ORF">AAA799P11_00173</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>2 D-sedoheptulose 7-phosphate = D-glycero-alpha-D-manno-heptose 7-phosphate + D-glycero-beta-D-manno-heptose 7-phosphate</text>
            <dbReference type="Rhea" id="RHEA:27489"/>
            <dbReference type="ChEBI" id="CHEBI:57483"/>
            <dbReference type="ChEBI" id="CHEBI:60203"/>
            <dbReference type="ChEBI" id="CHEBI:60204"/>
            <dbReference type="EC" id="5.3.1.28"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="9">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="9">Carbohydrate biosynthesis; D-glycero-D-manno-heptose 7-phosphate biosynthesis; D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate from sedoheptulose 7-phosphate: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="9">The reaction produces a racemic mixture of D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the SIS family. GmhA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.28" evidence="9"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20102">
        <property type="protein sequence ID" value="KFM20102"/>
        <property type="gene ID" value="AAA799P11_00173"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00041">
        <property type="reaction ID" value="UER00436"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008968">
        <property type="term" value="F:D-sedoheptulose 7-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001061">
        <property type="term" value="P:D-glycero-D-manno-heptose 7-phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05006">
        <property type="entry name" value="SIS_GmhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00067">
        <property type="entry name" value="GmhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035461">
        <property type="entry name" value="GmhA/DiaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004515">
        <property type="entry name" value="Phosphoheptose_Isoase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13580">
        <property type="entry name" value="SIS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9 11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="SIS" evidence="10">
        <location>
            <begin position="33"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="48"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="90"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="116"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="190" mass="20653" checksum="1C32572A1F243421" modified="2014-10-29" version="1">MIDEIEKLFTDSYEVLKKSISLSDGIEKCVSSIVNCYVNGNKVILFGNGGSAADAQHIAAEFIGRFKLERKSYPAIALTTDTSILTSLSNDYSSDVIFSRQCESLVCKGDVVIGISTSGKSKNVENGILMAKEKGAITIGLLGNDGGDLKNLVDFSLIVDSTETPRIQEVHRVIYHIICEIVEKKLSVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S320</accession>
    <name>A0A087S320_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-demethylubiquinone-9 3-methyltransferase protein</fullName>
            <ecNumber evidence="3">2.1.1.144</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ubiG</name>
        <name evidence="3" type="ORF">AAA799P11_00195</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.144" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20124">
        <property type="protein sequence ID" value="KFM20124"/>
        <property type="gene ID" value="AAA799P11_00195"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.194"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.50.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013630">
        <property type="entry name" value="Methyltransf_Zn-bd_dom_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038576">
        <property type="entry name" value="Methyltransf_Zn-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013691">
        <property type="entry name" value="MeTrfase_14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08421">
        <property type="entry name" value="Methyltransf_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08484">
        <property type="entry name" value="Methyltransf_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Methyltransf_13" evidence="1">
        <location>
            <begin position="3"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="Methyltransf_14" evidence="2">
        <location>
            <begin position="244"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="409" mass="47092" checksum="9E9ADF7A00F2B2F1" modified="2014-10-29" version="1">MKCRFCGNSELQVFLDLGMSPLANSFLKQSDLNNAESFYPLCSYFCQNCFLVQLDEFEPPKNIFSNYVYFSSFSDTWNSHIESFVSSLISKFNISKERQVIEIASNDGYLLKHFKKHEFPVLGIEPAANIAKVAESNGIPTVNKFFGIETANELSSKGRKADVLIAFNVLPHVPNLTEFVQGLKILLNQKGLLVVQFSAYLMSLIKYTEFDMIYHEHFSYFSLHTLEKIFSKNDLSIFDVEKLPVHGGSLRLFISHKDDSTFTKTENVSKFLEQEKEFGLQEPLFYKEFSKKVLSVKQEIWKFFISSKNENKKIVCYGAPAKGNTLLNFCGIGKDFIDYTVDKNDHKQNLFLPGTHIPIFSPEKVKSTKPDYLLILPWNLKDEIIEQMSFIREWNGKFVVLLPRIEIID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S324</accession>
    <name>A0A087S324_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glucose-mannose-6-phosphate isomerase protein</fullName>
            <ecNumber evidence="3">5.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00199</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PGI/PMI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.9" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20128">
        <property type="protein sequence ID" value="KFM20128"/>
        <property type="gene ID" value="AAA799P11_00199"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.198"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004347">
        <property type="term" value="F:glucose-6-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004476">
        <property type="term" value="F:mannose-6-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05017">
        <property type="entry name" value="SIS_PGI_PMI_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05637">
        <property type="entry name" value="SIS_PGI_PMI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019490">
        <property type="entry name" value="Glu6P/Mann6P_isomerase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035484">
        <property type="entry name" value="SIS_PGI/PMI_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10432">
        <property type="entry name" value="bact-PGI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="35"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="336" mass="37989" checksum="9B74937CF5511826" modified="2014-10-29" version="1">MIELSTIKKHDLDNMHNVYDRWPQIAKEAFESEIEPVDFKDIDHVVFSGMGGSGTIGDLFASILSKTDIHTTVVKGYELPKTVDDNTLVVTTSVSGNTVETLATLESASKKNCKVIGFSSDGTMESFCTQNNIEHRRISKIHSPRASFPIYVYSILKTLNSIIPIDKQEIVQSLDKLENLSQKISSTNLSETNPSLDLAEWLNGTPVIYYPWGLHATAIRFKNSLQENAKTHVIIEDIIETGHNGIVSWERPSDMVPIMIEGTDDHPKTKERWEILRQYFDENQIEYKEILSVDGGILSKILCLIYLLDYATIFHAIRLKIDPSPVKSIDFFKKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S334</accession>
    <name>A0A087S334_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Imidazoleglycerol-phosphate dehydratase</fullName>
            <shortName evidence="5">IGPD</shortName>
            <ecNumber evidence="5">4.2.1.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">hisB</name>
        <name evidence="6" type="ORF">AAA799P11_00209</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O</text>
            <dbReference type="Rhea" id="RHEA:11040"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57766"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="EC" id="4.2.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 6/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the imidazoleglycerol-phosphate dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.19" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20138">
        <property type="protein sequence ID" value="KFM20138"/>
        <property type="gene ID" value="AAA799P11_00209"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.208"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004424">
        <property type="term" value="F:imidazoleglycerol-phosphate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07914">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00076">
        <property type="entry name" value="HisB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038494">
        <property type="entry name" value="IGPD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000807">
        <property type="entry name" value="ImidazoleglycerolP_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020565">
        <property type="entry name" value="ImidazoleglycerP_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23133">
        <property type="entry name" value="PTHR23133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00475">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00955">
        <property type="entry name" value="IGP_DEHYDRATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="4 5 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="195" mass="21496" checksum="2FA4FC0DC61315B0" modified="2014-10-29" version="1">MKKRSSKIKRETKETSVSVTANIDGTGKTSVSTGVNFVDHLITAFGKHTMFDLMVKAKSKDNIVHHLIEDTAITIGNTIDEALGNRAGITRFSYASVPMDESLAEASVDLVKRPFYKLTLSIKRTKIEDVSKEDLEHFFQSLLQNLNSCIHLTVKYGDNDHHKVEAAMKSLAVALRIACSKDSKQKGIPSTKGAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S373</accession>
    <name>A0A087S373_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S19e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rps19e</name>
        <name evidence="5" type="ORF">AAA799P11_00253</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">May be involved in maturation of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20177">
        <property type="protein sequence ID" value="KFM20177"/>
        <property type="gene ID" value="AAA799P11_00253"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.247"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01474">
        <property type="entry name" value="Ribosomal_S19e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001266">
        <property type="entry name" value="Ribosomal_S19e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027548">
        <property type="entry name" value="Ribosomal_S19e_archaeal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11710">
        <property type="entry name" value="PTHR11710"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01090">
        <property type="entry name" value="Ribosomal_S19e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01413">
        <property type="entry name" value="Ribosomal_S19e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="150" mass="16705" checksum="C39CAE6A301F3BDA" modified="2014-10-29" version="1">MAKVYDVPADVLIGKLADILKNEDIPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRVVSKQGMQKLDRLATEILKEMIVENPQLKVYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H6</accession>
    <name>A0A087S3H6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00027</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20280">
        <property type="protein sequence ID" value="KFM20280"/>
        <property type="gene ID" value="AAA799P11_00027"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.27"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="132" mass="15275" checksum="E8B0B3B555D47FC4" modified="2014-10-29" version="1">MVDFLVEDCKCCPIDNTFKIIGKKFTIHILRNMVILNQHRFNEFINSVEGINPNTLSTRLKEMEQGGLIEKNIYNETPIRIEYDLTKKGKALQPILEEMAKFSAKFCCDEIFVDAKPRTFTQVYGKNLPIVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J0</accession>
    <name>A0A087S3J0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00041</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20294">
        <property type="protein sequence ID" value="KFM20294"/>
        <property type="gene ID" value="AAA799P11_00041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="31" mass="3470" checksum="927B6A8629BEB475" modified="2014-10-29" version="1">MSQALVTHQKRNALVFIGIMVAITGTVYFLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K8</accession>
    <name>A0A087S3K8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00059</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20312">
        <property type="protein sequence ID" value="KFM20312"/>
        <property type="gene ID" value="AAA799P11_00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="220" mass="25075" checksum="498B6F45C708715B" modified="2014-10-29" version="1">MDLKKEQQVVRLALVISIISGVGYVVFLSFDAPNSSNNALLGTEILFSGFGEITLFNPEQVTLFSTDIYQDTSLGYQVSKPNGNWEIHSVLNEMNSDELALLQAKGFLDGVYVEQNHDKRFIITVFDIQKENFSLHEYVDDIIESTESQNIEIPFEQVSSEDDWAIFAMSSLDQDQYGEQLFVVKDNRLYMLLYSGASPESLSLEQKQDFQYIMESFEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L7</accession>
    <name>A0A087S3L7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00068</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20321">
        <property type="protein sequence ID" value="KFM20321"/>
        <property type="gene ID" value="AAA799P11_00068"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.66"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="30"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="138" mass="15683" checksum="60D8A8E178C83C6C" modified="2014-10-29" version="1">MLLQNSKYLTYKVRSIVVTLNHHSNAVCLCPLDGVIETIGKKWSLLIVNEIGNHGSLRYNDLLDELSGISPSTLATMLKELQKEDIISREAFNEIPPRVEYTLTKRGKELRIAIMPLLKWATKKGNFKMHCSCTLLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P8</accession>
    <name>A0A087S3P8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Quinolinate synthase</fullName>
            <ecNumber evidence="2 9">2.5.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">nadA</name>
        <name evidence="10" type="ORF">AAA799P11_00099</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>dihydroxyacetone phosphate + iminosuccinate = H(+) + 2 H2O + phosphate + quinolinate</text>
            <dbReference type="Rhea" id="RHEA:25888"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29959"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
            <dbReference type="EC" id="2.5.1.72"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Cofactor biosynthesis; NAD(+) biosynthesis; quinolinate from iminoaspartate: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the quinolinate synthase family. Type 2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.72" evidence="2 9"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20352">
        <property type="protein sequence ID" value="KFM20352"/>
        <property type="gene ID" value="AAA799P11_00099"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.96"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008987">
        <property type="term" value="F:quinolinate synthetase A activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10800">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00568">
        <property type="entry name" value="NadA_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003473">
        <property type="entry name" value="NadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036094">
        <property type="entry name" value="NadA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023066">
        <property type="entry name" value="Quinolinate_synth_type2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30573">
        <property type="entry name" value="PTHR30573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02445">
        <property type="entry name" value="NadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142754">
        <property type="entry name" value="SSF142754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00550">
        <property type="entry name" value="nadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0408">Iron</keyword>
    <keyword evidence="8 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9 10" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="115"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="202"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM20352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="318" mass="35380" checksum="D6BCA3DB6E008B27" modified="2014-10-29" version="1">MLVQQTSKLKEEIERLKKEKDVVILAHNYQIPEVQDVADFTGDSLGLSRQAAKVPQKTILFCGVNFMAETAAIISPQKKVILPDLEAGCSLSDSITVDELRNWKKQHPGAIAVGYVNTTAEIKAELDYCCTSSNAVNVVKAIPEDKEILFLPDMFLGSYVAKMTGRKNMHIWAGECHVHAGITPDDVTKKLDSMKDAEFVIHPECSCTTPMMYDVADGSFDDQKVSILSTEGMLNHVKESKAKNFVVATETGILYRMRQQNPDKKFIPASEKAECQYMKMITLEKVHDALVNEKNIVTVPKEIADKARLAIDRMLAIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q8</accession>
    <name>A0A087S3Q8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00109</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20362">
        <property type="protein sequence ID" value="KFM20362"/>
        <property type="gene ID" value="AAA799P11_00109"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.107"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="284" mass="33433" checksum="5F3107733373DEF2" modified="2014-10-29" version="1">MALDEHSTKYGNLYSYKFYLRPTAHRLYGDRFSTIKKIKHHENVQKLLQILFLNGTCTTWEMAKIRNPNDVSTIRTKEKEFRRLIKGRTDRGKHSSGIMELGLVVNDGQKFNKGYSDTYRLSLPGILYCLDVLNLSKKEIDQMAAKYAIFVPKVFGKWEFLKSIIGDDVYKIQILARGLLLDNPELSLEKSPLYELMSYLNFKYRKFYEFISESDLSEQISYWFYTCILYQNQRKGKSGIPGVDKLHLIFKKDKEIANWYKSFFKESEVYFKDRTKILKGSGIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R9</accession>
    <name>A0A087S3R9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Copper-containing nitrite reductase</fullName>
            <ecNumber evidence="4">1.7.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_00120</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Fe(III)-[cytochrome c] + H2O + nitric oxide = Fe(II)-[cytochrome c] + 2 H(+) + nitrite</text>
            <dbReference type="Rhea" id="RHEA:15233"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16301"/>
            <dbReference type="ChEBI" id="CHEBI:16480"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="1.7.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Cu(+)</name>
            <dbReference type="ChEBI" id="CHEBI:49552"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Cu(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29036"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotrimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20373">
        <property type="protein sequence ID" value="KFM20373"/>
        <property type="gene ID" value="AAA799P11_00120"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.118"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050421">
        <property type="term" value="F:nitrite reductase (NO-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001287">
        <property type="entry name" value="NO2-reductase_Cu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00695">
        <property type="entry name" value="CUNO2RDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plastocyanin-like" evidence="7">
        <location>
            <begin position="92"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM20373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="470" mass="50857" checksum="25A7CCF9955B681E" modified="2014-10-29" version="1">MNKRVSMLFTIAAVAVMGATLFGSTYTQTQITGQSIDMDQMDVDVMDKIRNMGGLQLVMPEAFAETDCGVLENSGRTVVEFNLTGESVELPIMGGKTYNAMTFSGQVPGPTLRVTQGDVVKMTLTIPDWEVTGHGNDMHASQMSAGNFESVNPGEVSQYCYIAESAGIFKYHCSGVKLIGMDQHVLSGMYGIAIVDPANGYKKLMVEKTSGSGEIDRKFYDADALEFQLQYNQLYLTPEGNYDAGAMFKHQNTATVVNGLQFGYVPNMAHNLLVNGDVNKNIFVAQPWNGLEHKQYQSQLLFVENDQHVRLFIENQGNEPVFFHIVGEILDRVVQGNRVQSAATETWLLGGSQGMIVDVVFDEPGAYAAVNHDYAAIYTGAATVFVAGDPFGLNPVLVEKGVIPAPVASYAYALGNPSSAVPPMGMNSIAHPAINIHGLMTDDVASEMQASGDYVALWEVIPVVAEILTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S1</accession>
    <name>A0A087S3S1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA-t(6)A37 methylthiotransferase</fullName>
            <ecNumber evidence="6">2.8.4.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">AAA799P11_00122</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the methylthiolation of N6-threonylcarbamoyladenosine (t(6)A), leading to the formation of 2-methylthio-N6-threonylcarbamoyladenosine (ms(2)t(6)A) at position 37 in tRNAs that read codons beginning with adenine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>[sulfur carrier]-SH + AH2 + N(6)-L-threonylcarbamoyladenosine(37) in tRNA + 2 S-adenosyl-L-methionine = 2-methylsulfanyl-N(6)-L-threonylcarbamoyladenosine(37) in tRNA + 5'-deoxyadenosine + [sulfur carrier]-H + A + 2 H(+) + L-methionine + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:37075"/>
            <dbReference type="Rhea" id="RHEA-COMP:10163"/>
            <dbReference type="Rhea" id="RHEA-COMP:11092"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="ChEBI" id="CHEBI:74418"/>
            <dbReference type="ChEBI" id="CHEBI:74420"/>
            <dbReference type="EC" id="2.8.4.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 1 or 2 [4Fe-4S] cluster. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methylthiotransferase family. CDKAL1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.4.5" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20375">
        <property type="protein sequence ID" value="KFM20375"/>
        <property type="gene ID" value="AAA799P11_00122"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.120"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030604">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035598">
        <property type="term" value="F:N6-threonylcarbomyladenosine methylthiotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061712">
        <property type="term" value="F:tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005839">
        <property type="entry name" value="Methylthiotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020612">
        <property type="entry name" value="Methylthiotransferase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013848">
        <property type="entry name" value="Methylthiotransferase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038135">
        <property type="entry name" value="Methylthiotransferase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006466">
        <property type="entry name" value="MiaB-like_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00919">
        <property type="entry name" value="UPF0004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01578">
        <property type="entry name" value="MiaB-like-B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00089">
        <property type="entry name" value="TIGR00089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51449">
        <property type="entry name" value="MTTASE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01278">
        <property type="entry name" value="MTTASE_RADICAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="MTTase N-terminal" evidence="7">
        <location>
            <begin position="2"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="Radical SAM core" evidence="8">
        <location>
            <begin position="131"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="422" mass="46746" checksum="CB2CEBBAACD08E3A" modified="2014-10-29" version="1">MAKIFVESYGCSASFADSEMISGLILNGGHTLVEDSSESDLNVVVTCSVKDATANKMVHRIKSLKTKPLVVAGCLPKAEKETVEKFSENASLLGPNSLGKTLQVIDSTLKGRKEVALEDSDLSKVGLPKVRLNPAVGIVEIASGCMSECTFCQTKISKGDLQSYRLGDIVRQVKTEISEGCKEVWLTSTDNGCYGFDIGTDLPSLVNAVSDIPEEFMIRVGMMNPMYMPRIKENLIESYDNDKVFKFLHIPVQSGSDKVLHDMKRGHTAGTFREIVNKARERFPNFTISTDIIVGFPSETREDFEKTVKLLDETRPDVVNLSRYSARPGTEAAEWEQINVAEVKLRSKRIFEQINKISLENNKKWIGWKGSVLFDEQTDEGIKGRNFAYKPVFVPEQVDIGQSQAVEIIDATQNSLLGKIAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S9</accession>
    <name>A0A087S3S9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20383">
        <property type="protein sequence ID" value="KFM20383"/>
        <property type="gene ID" value="AAA799P11_00130"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="7946" checksum="3B0DF109BFC3145A" modified="2014-10-29" version="1">MKRDTSNYYEEIGLVLKNMVIVSLAIIISILIGIVLVTNYEILSEIWMVGLGLMISGAISGGIIGYSKFRNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T4</accession>
    <name>A0A087S3T4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20388">
        <property type="protein sequence ID" value="KFM20388"/>
        <property type="gene ID" value="AAA799P11_00135"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="126" mass="14185" checksum="1169D466CD50C24E" modified="2014-10-29" version="1">MSSQIISKSLDYACDILLANNAVRYVGILDNMGNLIYDKKQNGVNLSISDEKSRSLYIKSVLGILFEKDFDVQIGSLKYNVSHRTKIDMITIPMFNHVIVISTEPNENCDVIANSAIQIFEKLLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RM63</accession>
    <name>A0A087RM63_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon-nitrogen hydrolase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01534</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000111">
        <property type="protein sequence ID" value="KFM14567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14567">
        <property type="protein sequence ID" value="KFM14567"/>
        <property type="gene ID" value="AAA799P11_01534"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM14567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="7643" checksum="80FCD97FB157BD72" modified="2014-10-29" version="1" fragment="single">ETNLKKIISYIEKAASKNATLCAFPEFMMFYTTSSQTPKQLASLAETINGNFVKTIAKVAKENRIQVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RMJ7</accession>
    <name>A0A087RMJ7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transposase for insertion sequence element IS1106 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01531</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000108">
        <property type="protein sequence ID" value="KFM14701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14701">
        <property type="protein sequence ID" value="KFM14701"/>
        <property type="gene ID" value="AAA799P11_01531"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="8999" checksum="8478BD1B14EEF89F" modified="2014-10-29" version="1" fragment="single">ISTHLDETAIEQIVQCYADKGYDAKYIREYLKSRNIADCIPHRNYKTRCNETNNQNNYNKTRYVVERFFAWLKCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RML9</accession>
    <name>A0A087RML9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000107">
        <property type="protein sequence ID" value="KFM14723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14723">
        <property type="protein sequence ID" value="KFM14723"/>
        <property type="gene ID" value="AAA799P11_01530"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="85" mass="10367" checksum="B85F3BAE9758B235" modified="2014-10-29" version="1" fragment="single">EDVPIYKTRGYHRKRLKRYGYDESLYHQRNKTETIFSVIKKMFGENVTSRKIATQNRELFYRVIAYNSYRITQNKSLIWDGFYTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNN2</accession>
    <name>A0A087RNN2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DtxR family iron dependent repressor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000094">
        <property type="protein sequence ID" value="KFM15086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15086">
        <property type="protein sequence ID" value="KFM15086"/>
        <property type="gene ID" value="AAA799P11_01515"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001367">
        <property type="entry name" value="Fe_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036421">
        <property type="entry name" value="Fe_dep_repressor_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02742">
        <property type="entry name" value="Fe_dep_repr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47979">
        <property type="entry name" value="SSF47979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe_dep_repr_C" evidence="1">
        <location>
            <begin position="2"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="37" mass="4390" checksum="2D7C9E67AC03F260" modified="2014-10-29" version="1" fragment="single">DTEGIEHHLNPKTIKQLRKFITFLKANPKIIENFKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNZ2</accession>
    <name>A0A087RNZ2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-amino-37-dideoxy-D-threo-hept-6-ulosonate synthase protein</fullName>
            <ecNumber evidence="1">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">aroA'</name>
        <name evidence="1" type="ORF">AAA799P11_01511</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000092">
        <property type="protein sequence ID" value="KFM15196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15196">
        <property type="protein sequence ID" value="KFM15196"/>
        <property type="gene ID" value="AAA799P11_01511"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="8160" checksum="672273224C27949B" modified="2014-10-29" version="1" fragment="single">MVSGNQIRLNRILRKGRMLCIPMDHGISNGPIEGLEDPASTIYKCEGHGLTSVIINKGIIKSLPKPPKVGVLVHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQ00</accession>
    <name>A0A087RQ00_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ferredoxin--NADP reductase protein</fullName>
            <ecNumber evidence="2">1.17.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fpr</name>
        <name evidence="2" type="ORF">AAA799P11_01495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000083">
        <property type="protein sequence ID" value="KFM15554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15554">
        <property type="protein sequence ID" value="KFM15554"/>
        <property type="gene ID" value="AAA799P11_01495"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047099">
        <property type="term" value="F:CDP-4-dehydro-6-deoxyglucose reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="136" mass="15213" checksum="07128E190B33801F" modified="2014-10-29" version="1" fragment="single">MVVDNKATITYVQLLKEDLVIIRLVPKEGPVPEYKAGQFITLGLPNPVEGGKIVRRAYSIASHPENREYIELVIRWVRKPLPGRLTTQLFNAKEGDEILWLKPTGRALLINEELPNGEKDNRRIVCIGGGTGLAPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQG5</accession>
    <name>A0A087RQG5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01483</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000076">
        <property type="protein sequence ID" value="KFM15719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15719">
        <property type="protein sequence ID" value="KFM15719"/>
        <property type="gene ID" value="AAA799P11_01483"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="30" mass="3510" checksum="276E61DBEE4D3520" modified="2014-10-29" version="1">MGEKFPKLEPRKIIKLFLSSYVFKNSKPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQR8</accession>
    <name>A0A087RQR8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000070">
        <property type="protein sequence ID" value="KFM15822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15822">
        <property type="protein sequence ID" value="KFM15822"/>
        <property type="gene ID" value="AAA799P11_01470"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1376"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="138" mass="15632" checksum="222D66C75A39F7A6" modified="2014-10-29" version="1">MAMFLSFSVDSAFAHPHPGQIMINGHTHESQTELIPLSGMMGLEKSTVLFHAPEDNALPWGFVEGKIANHVEGYPVIIQIFQNNDAVHFAQTDVEEDGKYEYKFRVLHSENGNTKKIFDGDYSVIIFKVVYLNQENFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS58</accession>
    <name>A0A087RS58_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01446</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000057">
        <property type="protein sequence ID" value="KFM16312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16312">
        <property type="protein sequence ID" value="KFM16312"/>
        <property type="gene ID" value="AAA799P11_01446"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1364"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="12764" checksum="958BAE5E2334D141" modified="2014-10-29" version="1">MPNCPECTHREKKKIQEKYESEVPEEERSREDLFKLYDEIDIPMKMDEKNRRNFVCKRCGLYATREQVSDIRYKLNQKERTRDDKHDDYLEWWSKSKKEKAEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSK3</accession>
    <name>A0A087RSK3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-octaprenyl-4-hydroxybenzoate carboxy-lyase protein</fullName>
            <ecNumber evidence="1">4.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01429</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000049">
        <property type="protein sequence ID" value="KFM16457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16457">
        <property type="protein sequence ID" value="KFM16457"/>
        <property type="gene ID" value="AAA799P11_01429"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002830">
        <property type="entry name" value="UbiD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30108">
        <property type="entry name" value="PTHR30108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01977">
        <property type="entry name" value="UbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="48" mass="5276" checksum="7086E6265BF276BE" modified="2014-10-29" version="1" fragment="single">MDVPANAEIVLEGYVDPADIRDEGPFGDHTGYYTPVEPYPTFTLTGIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSS3</accession>
    <name>A0A087RSS3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cell-adhesion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01428</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000048">
        <property type="protein sequence ID" value="KFM16527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16527">
        <property type="protein sequence ID" value="KFM16527"/>
        <property type="gene ID" value="AAA799P11_01428"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="230" mass="25255" checksum="B438C7B4F2F0F6DF" modified="2014-10-29" version="1" fragment="single">MQKLSGISLLTVLFSGILFSSFAFAQEGPIAEDDFYTVDEDSLLIVDSIGVLQNDTNTTINPLNAILLNDVNFGTLTFHQNGNFTYLPNENSVVTDSFTYVANNGTHNSNDATVIIFVNPINDAPVAQNDFVETQQNVPISIDVLENDFDVDNDSLNIFLEIDPSETRGFVEIQESQVLFTPLAGFVGNTTFSYVASDGEKTSNSVNVTISVIEVEEPNDSLFEQIFEQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUG0</accession>
    <name>A0A087RUG0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PAC2 domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01384</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000037">
        <property type="protein sequence ID" value="KFM17114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17114">
        <property type="protein sequence ID" value="KFM17114"/>
        <property type="gene ID" value="AAA799P11_01384"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1315"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10900">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019151">
        <property type="entry name" value="Proteasome_assmbl_chaperone_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038389">
        <property type="entry name" value="PSMG2_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09754">
        <property type="entry name" value="PAC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="207"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="237" mass="25787" checksum="E373567B84466BCB" modified="2014-10-29" version="1">MYPKIRIKEFKPLNLEGGYLIDGFPSAGFSSAIATESMVHTSKFELAGVIDSDIFPPISVIKDGKPNYPSRIFVNEELKVGVFLSYLTLDQSLHKVTAKTMLKWAQKHKIGLVVSSIAVKSPNTDEDLIGIGSTDSARKKIRDAGLKVLEHGTVPGIPGTLLNEASVTGQDVIVIIFHTNGQGPDFKSSAQLCVAMSKLIPGTSCDIPVLQKEAEKAETVIKEAEEESRHLKDSMYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUJ5</accession>
    <name>A0A087RUJ5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">50S ribosomal protein L40e</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17149">
        <property type="protein sequence ID" value="KFM17149"/>
        <property type="gene ID" value="AAA799P11_01370"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1305"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1060.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038587">
        <property type="entry name" value="L40e_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001975">
        <property type="entry name" value="Ribosomal_L40e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023657">
        <property type="entry name" value="Ribosomal_L40e_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39649">
        <property type="entry name" value="PTHR39649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01377">
        <property type="entry name" value="Ribosomal_L40e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_L40e" evidence="3">
        <location>
            <begin position="3"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="55" mass="6507" checksum="3AACEA592A9C5856" modified="2014-10-29" version="1">MPITDPEKKRIAQQARLVMRICFNCGCRNDIDATRCRKCRNPYLRLKNRNLGVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUJ6</accession>
    <name>A0A087RUJ6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01371</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17150">
        <property type="protein sequence ID" value="KFM17150"/>
        <property type="gene ID" value="AAA799P11_01371"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1306"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="82" mass="9628" checksum="03F4AD636FAC54F9" modified="2014-10-29" version="1">MSLQEFDALIDRMKLAFEYAENLGQYVDAAKILFQMNEQLPDDLQVSLEDLENPDLAKSFVMRYNSDIKSAIVDYRQRLMNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV93</accession>
    <name>A0A087RV93_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">AAA799P11_01355</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein kinase superfamily. BUD32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17397">
        <property type="protein sequence ID" value="KFM17397"/>
        <property type="gene ID" value="AAA799P11_01355"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1292"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022495">
        <property type="entry name" value="Bud32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12209">
        <property type="entry name" value="PTHR12209"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03724">
        <property type="entry name" value="arch_bud32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="1"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM17397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="23328" checksum="2114BFE565CBE25A" modified="2014-10-29" version="1">MKLIKKGAEADIYQTTWQNSNAILKIRKTKNYRNSLLDSKIRKQRTIKESQIISQVKSFGIPAPLVYFVNLKNTSIIMQEIPGKPVHDLSESKIIQLSKSIGKLVGMLHKNGIMHGDLTTSNFIFFKNNVYVIDFGLSQNTIKPEDHAVDLRLIKEILNSAHAKIMIPAWKNFLLGYKSVVGNANYVKITKLVSDIESRGRYAQVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVB9</accession>
    <name>A0A087RVB9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Zinc uptake system ATP-binding protein ZurA</fullName>
            <ecNumber evidence="1">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">zurA</name>
        <name evidence="1" type="ORF">AAA799P11_01349</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000033">
        <property type="protein sequence ID" value="KFM17423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17423">
        <property type="protein sequence ID" value="KFM17423"/>
        <property type="gene ID" value="AAA799P11_01349"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1287"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="80" mass="9273" checksum="3739E553CCD6E819" modified="2014-10-29" version="1" fragment="single">GIDQQSIELFYSILRELNSKQNITIIWSSHDLDAVNQLANHVACLNRTLFFHGGSEDFFSNDDLVKQYSEASMQEHMHHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVI7</accession>
    <name>A0A087RVI7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Winged helix-turn-helix protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01323</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17491">
        <property type="protein sequence ID" value="KFM17491"/>
        <property type="gene ID" value="AAA799P11_01323"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1263"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038723">
        <property type="entry name" value="ArnR1-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14947">
        <property type="entry name" value="HTH_45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_45" evidence="1">
        <location>
            <begin position="6"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="95" mass="10832" checksum="39CD5E31E15BE2A2" modified="2014-10-29" version="1">MSKQQYRSEMGIMGDILNVTADGGREGIIVSAISRKANLSHYAVLDKCEKLVEAGLVESVKNDRNRVFQITEKGLQFFQEFKRFQGLVESMNLRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ3</accession>
    <name>A0A087RVJ3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GTP cyclohydrolase 1</fullName>
            <ecNumber evidence="3">3.5.4.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">GTP cyclohydrolase I</fullName>
            <shortName evidence="3">GTP-CH-I</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">folE</name>
        <name evidence="5" type="ORF">AAA799P11_01329</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>GTP + H2O = 7,8-dihydroneopterin 3'-triphosphate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17473"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:58462"/>
            <dbReference type="EC" id="3.5.4.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Cofactor biosynthesis; 7,8-dihydroneopterin triphosphate biosynthesis; 7,8-dihydroneopterin triphosphate from GTP: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homopolymer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GTP cyclohydrolase I family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.16" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17497">
        <property type="protein sequence ID" value="KFM17497"/>
        <property type="gene ID" value="AAA799P11_01329"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1269"/>
    <dbReference type="UniPathway" id="UPA00848">
        <property type="reaction ID" value="UER00151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003934">
        <property type="term" value="F:GTP cyclohydrolase I activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035998">
        <property type="term" value="P:7,8-dihydroneopterin 3'-triphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.286.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00223">
        <property type="entry name" value="FolE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043133">
        <property type="entry name" value="GTP-CH-I_C/QueF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043134">
        <property type="entry name" value="GTP-CH-I_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001474">
        <property type="entry name" value="GTP_CycHdrlase_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018234">
        <property type="entry name" value="GTP_CycHdrlase_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020602">
        <property type="entry name" value="GTP_CycHdrlase_I_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11109">
        <property type="entry name" value="PTHR11109"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01227">
        <property type="entry name" value="GTP_cyclohydroI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00063">
        <property type="entry name" value="folE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00859">
        <property type="entry name" value="GTP_CYCLOHYDROL_1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00860">
        <property type="entry name" value="GTP_CYCLOHYDROL_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="GTP_cyclohydroI" evidence="4">
        <location>
            <begin position="7"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM17497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="185" mass="21277" checksum="4891873CA5947010" modified="2014-10-29" version="1">MDEERVKKLVRELIIEVGEDPTREGLRETPERIANMYKEIFSGYDSDSELTVQFSEDSDVVVARDIQFYSMCEHHMLPFFGKIHIAYSPNGRVFGISKLVRLVEKYSKRLQIQERLTKNIADELYSQGVKGVVVLADAEHLCMKMRGVRNDATLSSSAFRGIYENKEEKEGIMTLIRKRASDSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW6</accession>
    <name>A0A087RWW6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MEMO1 family protein AAA799P11_01283</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01283</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the MEMO1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17970">
        <property type="protein sequence ID" value="KFM17970"/>
        <property type="gene ID" value="AAA799P11_01283"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1226"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07361">
        <property type="entry name" value="MEMO_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00055">
        <property type="entry name" value="MEMO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002737">
        <property type="entry name" value="MEMO1_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11060">
        <property type="entry name" value="PTHR11060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01875">
        <property type="entry name" value="Memo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="275" mass="30167" checksum="0BBF9EC5C2A7A92D" modified="2014-10-29" version="1">MIRKPVVAGQFYPGTKNELEEMISSCIQHKYGPGNQTQKDEKVFGIICPHAGYVYSGPTACHSYKAISSKNPELVIILGPNHFGVGRDVATMIDSKWETPLGWVEVDSEAAKEISNISKFIEIDEFSHSRDHSLEVQIPLLQSMLSNEFKILPIILLEQGLEIAKDVGNAVAEIAKSRNAMIVASSDFTHYEENSFAHSQDKALIEPILEMDIERFYQVLMDRGVTACGYGAMASTIVACKKLGATRGELLSYATSGDVQGDTSRVVGYGAIKFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW7</accession>
    <name>A0A087RWW7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AMMECR1 domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01284</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17971">
        <property type="protein sequence ID" value="KFM17971"/>
        <property type="gene ID" value="AAA799P11_01284"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1227"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023473">
        <property type="entry name" value="AMMECR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036071">
        <property type="entry name" value="AMMECR1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002733">
        <property type="entry name" value="AMMECR1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13016">
        <property type="entry name" value="PTHR13016"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01871">
        <property type="entry name" value="AMMECR1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143447">
        <property type="entry name" value="SSF143447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51112">
        <property type="entry name" value="AMMECR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMMECR1" evidence="1">
        <location>
            <begin position="1"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="148" mass="16683" checksum="41C97A6F7F05C8FF" modified="2014-10-29" version="1">MTNFQFSDSDGIELVKMARRVVTEFLKNNSKISDSEFDSKFDFSSGVFVTLNKEDDLRGCIGYPTPVKKLSGGLIVENDFSSGLLLPQVPTEYGWNEEEFLEHTCQKAGLNKDAWKEKSTTISKFQGVIFKEEKPNGNIIRESSNDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWX1</accession>
    <name>A0A087RWX1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01288</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17975">
        <property type="protein sequence ID" value="KFM17975"/>
        <property type="gene ID" value="AAA799P11_01288"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="50" mass="6121" checksum="5875631CBD47A706" modified="2014-10-29" version="1" fragment="single">EEQQRLMELRKPSLGSKNNEDQMNAFRITTQIMKYEDFIRDTEKQLRTMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY2</accession>
    <name>A0A087RWY2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein YxiE</fullName>
            <ecNumber evidence="2">3.1.1.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01251</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.61" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17986">
        <property type="protein sequence ID" value="KFM17986"/>
        <property type="gene ID" value="AAA799P11_01251"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1206"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008984">
        <property type="term" value="F:protein-glutamate methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="4"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="140" mass="14719" checksum="0869D5296CFC6EAE" modified="2014-10-29" version="1">MGKFQKILVPLDGSANSMRGLDKAISIANASDAEITGYYVFHLPVAAGLKYTKAMKDEAQKKAVKAIGPAMQKCERAGAKFKYATGGGNTAAQIINASKKGNFDMVVIGARGIGNAKETFLGSVSNSVMHKSKIPVLVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXD5</accession>
    <name>A0A087RXD5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000022">
        <property type="protein sequence ID" value="KFM18139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18139">
        <property type="protein sequence ID" value="KFM18139"/>
        <property type="gene ID" value="AAA799P11_01230"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1183"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.630">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007171">
        <property type="entry name" value="DUF371"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023131">
        <property type="entry name" value="Mth639-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40696">
        <property type="entry name" value="PTHR40696"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04027">
        <property type="entry name" value="DUF371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="138" mass="15492" checksum="9E2777CC24A816B4" modified="2014-10-29" version="1">MRFEIEFSGHENIRSNHQKTIEITKESHLTPQGDCIIGVNANHACADLPQDLKEKLKNSDSNITFSIDVGDYNFTVEGKGHPDLILTHTEDIVIRKSDFVCPRTLAVKCDKASDLLPREMVTLLQDPKTKGIFTITIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH2</accession>
    <name>A0A087RXH2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01202</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18176">
        <property type="protein sequence ID" value="KFM18176"/>
        <property type="gene ID" value="AAA799P11_01202"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="90" mass="9904" checksum="DA713054FBF313D5" modified="2014-10-29" version="1">MQWKSEGTTLILTVLLGILGLGGIGHIYLGNITRGIVLLIVGIVLAIITLVTFGIGLIALIPFAIWVVYDARKQCKYYNDHLEQTGRPPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI1</accession>
    <name>A0A087RXI1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endo-14-beta-xylanase B protein</fullName>
            <ecNumber evidence="1">3.2.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">xynB</name>
        <name evidence="1" type="ORF">AAA799P11_01216</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.8" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18185">
        <property type="protein sequence ID" value="KFM18185"/>
        <property type="gene ID" value="AAA799P11_01216"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1169"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031176">
        <property type="term" value="F:endo-1,4-beta-xylanase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0858">Xylan degradation</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="374" mass="41990" checksum="AF7D97F9FEDF31C2" modified="2014-10-29" version="1">MDKKILGVAIGIAIVIAAAAGVLSITDDSSPEVIPQKTNEKIGLVINSPTQSVTLQELDEIYATASESGIGRSNVYLFWNLVEPERGEYNWQYSDALMSFNQKNDLKVTLYFSIINGETLGPFPDWIGKPPIQSLNEDRVVSVLDAILSRYHIVDTVILAGETESQFRYYEQNIPPYKELFTRVYDKIKEKHPDVKIGNAFALHQVLNKNLENIVTDLDVGDFVAFSYSPVDTVGDMVKTPQQAKEDLEQIIDLAGDRNAAIFEISWSTSDFVGGSEESQTEFLEKSFEFYAENESQLEFFTWYRQNDKPEGTCSFEVQEIGEDNLSVGGSGFGSSEHVIERLNHYVCNAGLFDENGNPKPGWNEFKNQIQMLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL3</accession>
    <name>A0A087RXL3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01134</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18217">
        <property type="protein sequence ID" value="KFM18217"/>
        <property type="gene ID" value="AAA799P11_01134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="8046" checksum="587E45C6354215C5" modified="2014-10-29" version="1">MSNQELIAHSKPKSQRKVTYFCRLCRNYHITSRKAHLKNYHKADPDTISKRATNDIIDVIFRESINEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP7</accession>
    <name>A0A087RXP7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01173</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18251">
        <property type="protein sequence ID" value="KFM18251"/>
        <property type="gene ID" value="AAA799P11_01173"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1130"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="20"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="167" mass="18857" checksum="B73B5842E0C103A1" modified="2014-10-29" version="1">MSTLLEKPIKVNRIVTTSIEHARAIEDPARAKIVEILYHQALSADQITTALKKSGFKKALTTIRHHLEILKESGLIEIVKIEESRGAITKFYSTSTKLLDFQTPEDFESKYSKLIDNTSTKIEKILKGLTPKTGKSKGKKSEEYSQYLVMEIMNRAMTNVLENSGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ7</accession>
    <name>A0A087RXQ7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01183</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18261">
        <property type="protein sequence ID" value="KFM18261"/>
        <property type="gene ID" value="AAA799P11_01183"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1140"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="127" mass="15154" checksum="4892DA6956810E68" modified="2014-10-29" version="1">MTEKENPLYPIEIDDYPKLFDYVLTANGLVYFQSLKRNYILGKELTQDEYNKLRLLYVYYATANRNVSEVFAWQDLCVILDNQGIPEKEMFQSKEDLKNKQLIIENPHYSSGLYRKYTEFVKNMNSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY40</accession>
    <name>A0A087RY40_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative GMP synthase glutamine-hydrolyzing protein</fullName>
            <ecNumber evidence="1">3.2.2.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01107</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.20" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18394">
        <property type="protein sequence ID" value="KFM18394"/>
        <property type="gene ID" value="AAA799P11_01107"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1068"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008725">
        <property type="term" value="F:DNA-3-methyladenine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005019">
        <property type="entry name" value="Adenine_glyco"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03352">
        <property type="entry name" value="Adenine_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="190" mass="22040" checksum="E32486F9750D68AD" modified="2014-10-29" version="1">MLESGKNMKRCQWATVEPNITYHDNEWGRPQHDDQKLFEFLILEGAQAGLSWVTILKRRDGYKKAFSDFDVIKVSKYSQKRISKLLQDETIIRNKLKIHSAINNAKQFLKIQEEFGSFDKYLWGFVNNKPIKNKFKKLSDLPTSTEISKKLSTDLKKRGFTFVGPTICYALMQAIGMVNDHTSECFLHGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE4</accession>
    <name>A0A087RYE4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01068</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18498">
        <property type="protein sequence ID" value="KFM18498"/>
        <property type="gene ID" value="AAA799P11_01068"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1030"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018592">
        <property type="entry name" value="DUF2024"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023122">
        <property type="entry name" value="NE1680-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09630">
        <property type="entry name" value="DUF2024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160766">
        <property type="entry name" value="SSF160766"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="88" mass="10131" checksum="49F8375EB9C407D3" modified="2014-10-29" version="1">MDMDFHVFDTYVKAKDGHTMHFDVVTDNNNVEKAISYAKEWLSTIGEENSKVTTEECKFCHTQSVPEDIEIEIMTNGYFISKMEGCPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE5</accession>
    <name>A0A087RYE5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acetyl-D-glucosamine kinase protein</fullName>
            <ecNumber evidence="1">2.7.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nagK</name>
        <name evidence="1" type="ORF">AAA799P11_01069</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.4" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18499">
        <property type="protein sequence ID" value="KFM18499"/>
        <property type="gene ID" value="AAA799P11_01069"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1031"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008865">
        <property type="term" value="F:fructokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01125">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="288" mass="31033" checksum="61D34366E2FA53A6" modified="2014-10-29" version="1">MYKLGVDLGGTKIEAILLDDSLNVLERKRISTPKENYFEIVDVISNLVSEISSNVSDFSLGICAPGAISKKTGLIKNSNTQCLIGKPLKEDLEEKLNKSVSMENDANCFVMAESKMGSAKQFDFVFGVIMGTGVGGGIVVNGKLHSGRTNIAGEWGHHTLHHNGNPCYCGKTGCVETYISGSALEKKWELLSGQTKPMPEILSNLDNDVGKKWKNEFLENFGFGLANVIDILDPDAIVLGGGLSNIDFLYTEGKNSVYEKVFSDSVDTPILKNKLGDSAGVYGAALLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYG5</accession>
    <name>A0A087RYG5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-glucose 4-epimerase protein</fullName>
            <ecNumber evidence="2">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01089</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18519">
        <property type="protein sequence ID" value="KFM18519"/>
        <property type="gene ID" value="AAA799P11_01089"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1051"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="293" mass="32689" checksum="F7C45ACB90375E17" modified="2014-10-29" version="1">MKILILGSEGFVGNNLVEGLSKNHEIFCADMLENSSHKNYKQFNVTDYTSVENTVKNVDVVIDLVAHPLVSSIEGPAKNAEINIIGLLHVLDACVKNQIKKIIFTSASSMIGEPTTPSVSESHTAIPKTAYGITKLASEHYLRLYNELHNLNYVIFRFFNIYGPHQKNGLIPSLYSRITQNQPLTVFGKGDQIRDYVFIRDIIPFFEKAATTNIGDNQIFNMGTGKGASILDVINILSETIQIQPEIEFKEVRPGEIGNFVSDPRLLESTFGDVPSTPLQEGIRQTVNWFKDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK2</accession>
    <name>A0A087RYK2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ACR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01043</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18556">
        <property type="protein sequence ID" value="KFM18556"/>
        <property type="gene ID" value="AAA799P11_01043"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1004"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.1140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003795">
        <property type="entry name" value="DUF192"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038695">
        <property type="entry name" value="Saro_0823-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37953">
        <property type="entry name" value="PTHR37953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02643">
        <property type="entry name" value="DUF192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="163" mass="18053" checksum="1DAD0A9DBC212831" modified="2014-10-29" version="1">MTTRAQALIPISIAAVIIGIVGLMSIPSESKLESVEFPVGTIKVDDVPLEVQIADTEPRRVRGLMFQDQLPYDQGMIFVFGEPGLYSLWMLNMQFPLDMIWFDENGKVVHIEQDVPPCKAALEIATCQSVVPENEAVYILEVTAGFVEQNNITKDSVLTIISI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL4</accession>
    <name>A0A087RYL4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SNARE associated golgi family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18568">
        <property type="protein sequence ID" value="KFM18568"/>
        <property type="gene ID" value="AAA799P11_01055"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1017"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="210" mass="23384" checksum="9852875D11F53194" modified="2014-10-29" version="1">MDFVDLFPFAPEVGYLSLALVNFIGSLVPFVPLPGFLLLATMSVGDQFDLHVLAILSAVTATIAKQIIFYVSYGGRKIINEKTRKRMRPFERLVKRYGAGAAFFAAATPIPDDLVYVPLGLAKYNPKRFFIATLTGKFVLSYTIVFVSHYLGLSLVEPLLENVDDATPIYIGIIIFGAMMTAVVVLLLRLDWQRILGKFAPWTLDENNKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ21</accession>
    <name>A0A087RZ21_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">tRNA nucleotidyltransferase CCA-adding enzyme protein</fullName>
            <ecNumber evidence="6">2.7.7.72</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01015</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the archease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.72" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18725">
        <property type="protein sequence ID" value="KFM18725"/>
        <property type="gene ID" value="AAA799P11_01015"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.981"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052929">
        <property type="term" value="F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052928">
        <property type="term" value="F:CTP:3'-cytidine-tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052927">
        <property type="term" value="F:CTP:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016437">
        <property type="term" value="F:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002804">
        <property type="entry name" value="Archease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023572">
        <property type="entry name" value="Archease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036820">
        <property type="entry name" value="Archease_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12682">
        <property type="entry name" value="PTHR12682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01951">
        <property type="entry name" value="Archease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69819">
        <property type="entry name" value="SSF69819"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Archease" evidence="5">
        <location>
            <begin position="3"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="138" mass="15964" checksum="B06FA6A6D5872DD0" modified="2014-10-29" version="1">MSYKFLDHATDAIIEVTAKDLKEAFSVTADAVINLTLDQDKVEEKEQKEFSAKGKDLRYLLFSWLEEIPFLLITEGFAIKRIELDITQNGDYEIDAIAYGEPLDFQKHNFKVEIKAPTFYDMEIKQNGGVFMRFLLDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ27</accession>
    <name>A0A087RZ27_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Translation initiation factor 6</fullName>
            <shortName evidence="3">aIF-6</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">eif6</name>
        <name evidence="4" type="ORF">AAA799P11_01021</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the eIF-6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18731">
        <property type="protein sequence ID" value="KFM18731"/>
        <property type="gene ID" value="AAA799P11_01021"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.987"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042256">
        <property type="term" value="P:mature ribosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00032">
        <property type="entry name" value="eIF_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002769">
        <property type="entry name" value="eIF6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10784">
        <property type="entry name" value="PTHR10784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01912">
        <property type="entry name" value="eIF-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006413">
        <property type="entry name" value="IF-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00654">
        <property type="entry name" value="eIF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00323">
        <property type="entry name" value="eIF-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="221" mass="23949" checksum="392A96179EAE4233" modified="2014-10-29" version="1">MDIIKFDVYRGPNIGVYISVNDKTILLPMGFAKTKAEKLAKYLGADYLFTSIANTRLIGALCIMNNKGILLPKTAYQNEYDFIKKELDLEVGVLDSKFTALGNVICANDKGAVVSPWLSKEDCQTISDVLGVETIQKKIAGFNQTGVVMVANNSGAAIHPEADEEDMKTFSNLLGVKIEQSSINNGIPYVSSGILANNNCIIVGSLTTGPEIMMLTRAFLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ50</accession>
    <name>A0A087RZ50_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glutamyl-tRNA(Gln) amidotransferase subunit E</fullName>
            <shortName evidence="6">Glu-ADT subunit E</shortName>
            <ecNumber evidence="6">6.3.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">gatE</name>
        <name evidence="8" type="ORF">AAA799P11_00963</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterodimer of GatD and GatE.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the GatB/GatE family. GatE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18754">
        <property type="protein sequence ID" value="KFM18754"/>
        <property type="gene ID" value="AAA799P11_00963"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.927"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004812">
        <property type="term" value="F:aminoacyl-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00588">
        <property type="entry name" value="GatE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017959">
        <property type="entry name" value="Asn/Gln-tRNA_amidoTrfase_suB/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006075">
        <property type="entry name" value="Asn/Gln-tRNA_Trfase_suB/E_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018027">
        <property type="entry name" value="Asn/Gln_amidotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004115">
        <property type="entry name" value="GAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029351">
        <property type="entry name" value="GAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042114">
        <property type="entry name" value="GatB_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004414">
        <property type="entry name" value="GatE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659">
        <property type="entry name" value="PTHR11659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659:SF2">
        <property type="entry name" value="PTHR11659:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02938">
        <property type="entry name" value="GAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02934">
        <property type="entry name" value="GatB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02637">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00845">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55261">
        <property type="entry name" value="SSF55261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00134">
        <property type="entry name" value="gatE_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 6 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GatB_Yqey" evidence="7">
        <location>
            <begin position="485"/>
            <end position="627"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="634" mass="71674" checksum="9147C7C7DC1787D1" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ62</accession>
    <name>A0A087RZ62_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_00975</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18766">
        <property type="protein sequence ID" value="KFM18766"/>
        <property type="gene ID" value="AAA799P11_00975"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.941"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023486">
        <property type="entry name" value="TFIIB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="TF_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00782">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51134">
        <property type="entry name" value="ZF_TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIB-type" evidence="7">
        <location>
            <begin position="7"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="300" mass="33317" checksum="B41DD3437947CF73" modified="2014-10-29" version="1">MTQQLQNKEKCPRCGKNNLVTDNESGELFCGKCGLVIDEKISDNRPERMFSDSTVNKSRTGDRTSLTRHDQGLSTIISPINKDSSGNPLSASMKTSLKRLRVWDSRSRTKDSVDRNLQQALSELLKMKEKLSLSDVIVEKAAYIYRKALEKKLVKGRSISSLIAASLYAACRESGIPRTLNEISTLGNIRRKELSTCYRMLLKELDLRMPVVDSVSCIAKIASVAILSEKTKRYAMKILKKAEQEKILAGKDPMGMAAAALYLASLKMGEDITQKTIADAAGVTEVTVRHRAKNLKTIMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ67</accession>
    <name>A0A087RZ67_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative protease eep protein</fullName>
            <ecNumber evidence="8">3.4.24.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">eep</name>
        <name evidence="8" type="ORF">AAA799P11_00980</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18771">
        <property type="protein sequence ID" value="KFM18771"/>
        <property type="gene ID" value="AAA799P11_00980"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.946"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001193">
        <property type="entry name" value="MBTPS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008915">
        <property type="entry name" value="Peptidase_M50"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13325">
        <property type="entry name" value="PTHR13325"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02163">
        <property type="entry name" value="Peptidase_M50"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01000">
        <property type="entry name" value="SREBPS2PTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="326"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="369"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M50" evidence="6">
        <location>
            <begin position="120"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="7">
        <location>
            <begin position="223"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M50" evidence="6">
        <location>
            <begin position="322"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="398" mass="44083" checksum="59047661DD492A07" modified="2014-10-29" version="1">MELDFITQNSIIYVLMAWVVIIIIAKGLKLEKHGFEIKAYSLTYKNKQVNSVLLKLLSRTRRGIRVFADVSVISGFIMMGFAFWFLLNNVANFFVAQTEFSELTVLIPGVTLTSAASITYFLLSIPVVLVIHEGAHGIVAALEKIKIKTGGFAIFIAMFAGFVEPDEEEFNKAKKISKLRVIGAGATSNVIFAFVLGAILLTNPFFAMVLPEPLLSTFYELPEGVLILSIIENSGAEQAGLLANDIITSINDKPILSPVDFPSLNPGDMASVSVIRDGQPLEFSLEVMPAPDDPERGLIGIMRDNSFAYKPVMNFIEWNDPNLSMFLLWLWMISFFIGIINMLPLPILDGGKFIHTIIDKRISEKAVNGVMWGIYAFTFALFGLNIALSYVKSGWFTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ78</accession>
    <name>A0A087RZ78_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Group 1 glycosyl transferase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00991</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18782">
        <property type="protein sequence ID" value="KFM18782"/>
        <property type="gene ID" value="AAA799P11_00991"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="1">
        <location>
            <begin position="31"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="15018" checksum="091D7682ECBDDB95" modified="2014-10-29" version="1">MRILFIAPKYSGGIGGHAKRVADKLQENGFEIELMHAPHVPIKKLKNPTFAVSSILKAISGRKTYDIVHAFNLPSAFAMKYTKAKKKVLSIHGVYSEQIDALHSETTSTKVKNKEADILKWADKLLTNSKNVKQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ93</accession>
    <name>A0A087RZ93_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phthiotriol-phenolphthiotriol dimycocerosates methyltransferase 1 protein</fullName>
            <ecNumber evidence="2">2.1.1.144</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01006</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.144" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18797">
        <property type="protein sequence ID" value="KFM18797"/>
        <property type="gene ID" value="AAA799P11_01006"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="93"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="330" mass="38348" checksum="086EC166C62A839C" modified="2014-10-29" version="1">MGRSYFTRILNLKNSVISSKTSSYSVIDGIPNFVETIDDTTQKQVQHSFGEKWIQSDFGQDDLEFEEKIKPIYLEMMGLDESNLDIFKNKTILEVGIGSGSSSRIWGPDAKEFHGIDISKAVFKAKTNLQDTIKNPILAQADVNKMPYRDESFDIVVSNGVFHHTPNTKLAVKSSLKKLKIGGTCIFYIYKIKSPIREFSDDYIRSKISNLSYDEAWKKIKPITDFGKLLDEKNIQLNIPFDLELLGIKKGTYSLQRFFYDYFFKCFWNNSWGYDYSNLVNIDWYHPKYCWRHSKNEIISWCDEFDLQIQYLKELQSGYACSVIKNSQLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ95</accession>
    <name>A0A087RZ95_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore coat polysaccharide biosynthesis protein SpsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spsC</name>
        <name evidence="2" type="ORF">AAA799P11_01008</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DegT/DnrJ/EryC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18799">
        <property type="protein sequence ID" value="KFM18799"/>
        <property type="gene ID" value="AAA799P11_01008"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.974"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00616">
        <property type="entry name" value="AHBA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000653">
        <property type="entry name" value="DegT/StrS_aminotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30244">
        <property type="entry name" value="PTHR30244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01041">
        <property type="entry name" value="DegT_DnrJ_EryC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000390">
        <property type="entry name" value="PLP_StrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="361" mass="39912" checksum="3F99041AD0B1A2FC" modified="2014-10-29" version="1">MKKTIQLAVPDIGEEELQAIKEVFATRFLTEGNTTKEFEKSVAEYLGAKHAIAVTSCTTGLHAVLECLNIRGQDVIIPDYTYPATAEAVVLAGGIPVLADVDKKSMNMTSEILEDAYNENMTVCCPVSWAGVPLERELYQTAKKLGLKVLEDAACSLGAKIGTDFVGKIADYSCFSFHPRKVITTGEGGMITTDDDEIAEKCYSFKHFGAKGASFEMIGTNYKLSNVLSAIGLIQMQKLEDIVKMRIEKAKIYRELLSNVDGILQAYEGEGTRQTFQSYTCYVEKEGNRDRIRNALADENIQSQIGTYALHLEPAYKNMKKIGNLENSEALYKNALTLPLHSKLTDEDQVKICNIISEVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB4</accession>
    <name>A0A087RZB4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00939</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18818">
        <property type="protein sequence ID" value="KFM18818"/>
        <property type="gene ID" value="AAA799P11_00939"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="8522" checksum="1DA1D69FC5F68091" modified="2014-10-29" version="1">MYNNPKIRKYLELENYTLEEFEERLTEALEIIKILKERDQNQQRMKKSLDKCYRKNLMSLNNFMKNTTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC9</accession>
    <name>A0A087RZC9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AsnC family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00954</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18833">
        <property type="protein sequence ID" value="KFM18833"/>
        <property type="gene ID" value="AAA799P11_00954"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="8937" checksum="26118C47E55FC9C2" modified="2014-10-29" version="1">MGTVFVLVNCDMGFEVQTISKLKEICDEVQGTYGIFDFVCKLNYDSIEYFEKTIQKIRQIEKITHTNTIHTIPEQSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG4</accession>
    <name>A0A087RZG4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MscS mechanosensitive ion channel protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00899</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18868">
        <property type="protein sequence ID" value="KFM18868"/>
        <property type="gene ID" value="AAA799P11_00899"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.861"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="65" mass="7236" checksum="504514D2A18D8E6E" modified="2014-10-29" version="1">MIEFFDSLAQTEITETLNLLGLLIGGIIMAVGVIVARTVRVFFKKYYAPKLSKDSAILELSLLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN0</accession>
    <name>A0A087RZN0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18934">
        <property type="protein sequence ID" value="KFM18934"/>
        <property type="gene ID" value="AAA799P11_00880"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.842"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="251"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="281" mass="31998" checksum="ADF13411152BA231" modified="2014-10-29" version="1">MVVLFFVLSITLVTSTVYAQTPFRDTAGLTKNGIEWCEENYQLYQFMGNDFFEHHQHSIESRLCGNLYNDELWFYTEPDRYQKLIEQSRIYYALEIQESASESKEGKIDTKPVIVEEIPQEIEQQQKEIEESKINETQPKEIKTEDTIPKQEQTNESNGGGCLIATAAYGIELAPQVQFLREIRDNTIMSTTSGASFMTGFNQLYYSFSPTIADWERENPMFQEAVRAFITPMISTLSIMTLAEDGSEVEVLGLGISVIALNLAMYIAAPALIGFKVHKYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN5</accession>
    <name>A0A087RZN5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Benzene 12-dioxygenase system ferredoxin subunit protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bedB</name>
        <name evidence="5" type="ORF">AAA799P11_00885</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18939">
        <property type="protein sequence ID" value="KFM18939"/>
        <property type="gene ID" value="AAA799P11_00885"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.847"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="4">
        <location>
            <begin position="4"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="10860" checksum="0758E5E6AF332161" modified="2014-10-29" version="1">MGKIIAGKTSDIPPGKMIKVSIDGRDILVANIDGEYCATDDSCTHSGASLSEGKLDGCVVTCGWHAAEFDCKTGKLVKFPAKIRDLTSYNVTVESDSVFVEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN8</accession>
    <name>A0A087RZN8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glutamate--tRNA ligase</fullName>
            <ecNumber evidence="7">6.1.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Glutamyl-tRNA synthetase</fullName>
            <shortName evidence="7">GluRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">gltX</name>
        <name evidence="11" type="ORF">AAA799P11_00888</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu)</text>
            <dbReference type="Rhea" id="RHEA:23540"/>
            <dbReference type="Rhea" id="RHEA-COMP:9663"/>
            <dbReference type="Rhea" id="RHEA-COMP:9680"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.17"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.17" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18942">
        <property type="protein sequence ID" value="KFM18942"/>
        <property type="gene ID" value="AAA799P11_00888"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.850"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004818">
        <property type="term" value="F:glutamate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006424">
        <property type="term" value="P:glutamyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02076">
        <property type="entry name" value="Glu_tRNA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004526">
        <property type="entry name" value="Glu-tRNA-synth_arc/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000924">
        <property type="entry name" value="Glu/Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020059">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_codon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_L25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_L25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03950">
        <property type="entry name" value="tRNA-synt_1c_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00987">
        <property type="entry name" value="TRNASYNTHGLU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="SSF50715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00463">
        <property type="entry name" value="gltX_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1c" evidence="9">
        <location>
            <begin position="100"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-synt_1c_C" evidence="10">
        <location>
            <begin position="407"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="7">
        <location>
            <begin position="107"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM18942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="569" mass="65449" checksum="5B6452D4209F98F5" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR1</accession>
    <name>A0A087RZR1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">16S rRNA aminocarboxypropyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">AAA799P11_00817</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18965">
        <property type="protein sequence ID" value="KFM18965"/>
        <property type="gene ID" value="AAA799P11_00817"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.780"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106388">
        <property type="term" value="F:18S rRNA aminocarboxypropyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007209">
        <property type="entry name" value="RNaseL-inhib-like_metal-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022968">
        <property type="entry name" value="Tsr3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007177">
        <property type="entry name" value="Tsr3_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20426">
        <property type="entry name" value="PTHR20426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04034">
        <property type="entry name" value="Ribo_biogen_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04068">
        <property type="entry name" value="RLI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RLI" evidence="8">
        <location>
            <begin position="4"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="Ribo_biogen_C" evidence="7">
        <location>
            <begin position="32"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00014114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="157" mass="17833" checksum="9164EA2905E634E4" modified="2014-10-29" version="1">MFYQDDPKKCTAAKMVKFGLAQNIKKIGTKGLVLDPFSKNTLMPKDKSLINSIVGIDCSWNLADQAFSKKFNGIKRKLPPLLAGNPVNYAKLNKLTTVEALAASLFILGQKEQGMELLEKFKWGHTFYELNQNLFDEYLKLKNEEQIELILKDYGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS6</accession>
    <name>A0A087RZS6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Protein translation factor SUI1 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00832</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the SUI1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="A0A087RZS6"/>
    <dbReference type="EnsemblBacteria" id="KFM18980">
        <property type="protein sequence ID" value="KFM18980"/>
        <property type="gene ID" value="AAA799P11_00832"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.799"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11567">
        <property type="entry name" value="YciH_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00604">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001950">
        <property type="entry name" value="SUI1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022851">
        <property type="entry name" value="SUI1_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005872">
        <property type="entry name" value="SUI1_arc_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036877">
        <property type="entry name" value="SUI1_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01253">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037511">
        <property type="entry name" value="Transl_init_SUI1_pro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55159">
        <property type="entry name" value="SSF55159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50296">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 5" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="SUI1" evidence="6">
        <location>
            <begin position="27"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR037511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11278" checksum="2B5AA3988D9260F2" modified="2014-10-29" version="1">MAVICNTCGLPEDLCACGELAKDSTKIIIRLETRRFKKKGTMIEGLDPKLNNLETVAKELKSKYACGGTAKEGYIFLQGDHRDTIKDTLTDLGFAEESIELH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS8</accession>
    <name>A0A087RZS8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transcription initiation factor IIB</fullName>
            <shortName evidence="5">TFIIB</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tfb</name>
        <name evidence="8" type="ORF">AAA799P11_00834</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18982">
        <property type="protein sequence ID" value="KFM18982"/>
        <property type="gene ID" value="AAA799P11_00834"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.801"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00383">
        <property type="entry name" value="TF2B_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023484">
        <property type="entry name" value="TFIIB_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023486">
        <property type="entry name" value="TFIIB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="TF_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00782">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51134">
        <property type="entry name" value="ZF_TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIB-type" evidence="7">
        <location>
            <begin position="7"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="repeat" description="1" evidence="5">
        <location>
            <begin position="123"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="302" mass="33128" checksum="84C0A1721C40568D" modified="2014-10-29" version="1">MVKTVNPKDRCPRCGKGTLVTDANTGENFCGKCGFVITDKVEESGPEWRSFSNEGENKSRAGVPTSLAMHDMGLATVINPQNRDATGKPLTASMKSTIERLRTWDSRSQVHEPVDRNFRQAFSELDRLKDKLAVGDAVIEKAAYIYRKALEKGLVRGRSISALIASALYAACRDTETPRTLKDIGQASNIKRKDIARCYRLLLRELNLKMPVVDPIKCISRIASKAGLSEKTKRKATKILQTAEENKISAGKDPMGLAAAALYVACVTNGENKTQRDVAEAAGVTEVTIRNRYKGLKVALNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU8</accession>
    <name>A0A087RZU8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DNA polymerase IV</fullName>
            <shortName evidence="11">Pol IV</shortName>
            <ecNumber evidence="11">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">dbh</name>
        <name evidence="14" type="ORF">AAA799P11_00854</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="11">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the DNA polymerase type-Y family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="11"/>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM19002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19002">
        <property type="protein sequence ID" value="KFM19002"/>
        <property type="gene ID" value="AAA799P11_00854"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.822"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03586">
        <property type="entry name" value="PolY_Pol_IV_kappa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01113">
        <property type="entry name" value="DNApol_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036775">
        <property type="entry name" value="DNA_pol_Y-fam_lit_finger_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017961">
        <property type="entry name" value="DNA_pol_Y-fam_little_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022880">
        <property type="entry name" value="DNApol_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024728">
        <property type="entry name" value="PolY_HhH_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001126">
        <property type="entry name" value="UmuC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00817">
        <property type="entry name" value="IMS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11799">
        <property type="entry name" value="IMS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11798">
        <property type="entry name" value="IMS_HHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100879">
        <property type="entry name" value="SSF100879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50173">
        <property type="entry name" value="UMUC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 11" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9 11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 11" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="7 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 11" id="KW-0515">Mutator protein</keyword>
    <keyword evidence="3 11 14" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 11 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="UmuC" evidence="13">
        <location>
            <begin position="6"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="259"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="site" description="Substrate discrimination" evidence="11">
        <location>
            <position position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="KFM19002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="364" mass="41728" checksum="3BD52F62DE7EA068" modified="2014-10-29" version="1">METRIVFHIDFDYFYAQCEEIRSPELKSKPVCVCVFSDRGGDSGAIATANYTARKYGVKSGIPIVFAKKRLEERKDVVFLPVDFDYYSEMSEKAMKIMEEFSDIFEYIGRDEAYLDVTKRTEGDFHKASHLAQQIKNSIREKTKLSCSIGISPNKLISKIASDFQKPDGLTIVSPEKIDEFLESLKIRDIPGIGKKTEQRFVEMKLETIGDVKKLDVFTLNKEFGRKSGTYIYNAVRGIDNEPVKEREPSIQHGKIVTLKKDSKDYKFLLENLQELCKEVHEIIQKKNQMFKSVGISFVQSDLSNKSKSKMLRNPTMSLDELEKTAELLLKEALENQTITIRRLGVKVSELSESQGQRDITSYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0K4</accession>
    <name>A0A087S0K4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00776</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19258">
        <property type="protein sequence ID" value="KFM19258"/>
        <property type="gene ID" value="AAA799P11_00776"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4197" checksum="238C5DF2BAF9CFEC" modified="2014-10-29" version="1">MAGIFDSIPIITVVLFALGLVGVIVYERSRSKTPDESDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S114</accession>
    <name>A0A087S114_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Integrase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00742</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19418">
        <property type="protein sequence ID" value="KFM19418"/>
        <property type="gene ID" value="AAA799P11_00742"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="130"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="332"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="401" mass="46525" checksum="2E6F3A326418CE3D" modified="2014-10-29" version="1">MAQRIISQIELSIQKELDEQKVKSKAYFKFKQAIKKPTTLRAYKLALDRFMILSNMKSYDKVTELKSDKIQDLLESYIISLNKMSFQTANQRLAGVELFFDMNMVLYHKKILRKLLPGNDKEQGGKLAYTTEEIKEMLSLTTKLRSKAIIHFFASTGCRPSAIADPIFRLKHVEEMNHKCKSILVYSGSKEKYYAFLTPEASKALDSYLNQRKLNGEKLDEESPVFANISDFPTTKQAHLSVNSTNQIIRDILKKSSIERKRNGQRHDKAELYGFRKRFNTILKLENEINSNIAEKLMAHKRGLDGTYLQPTKEECFGEFIKAIPQLTIDSTQKQQIQIKDLEEKLETTENLKARIQSLEESKGLYKQEMELMSKKKHTTIEDLQEQMQEMAKAIQELKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S132</accession>
    <name>A0A087S132_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Matrixin domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00760</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19436">
        <property type="protein sequence ID" value="KFM19436"/>
        <property type="gene ID" value="AAA799P11_00760"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021190">
        <property type="entry name" value="Pept_M10A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00138">
        <property type="entry name" value="MATRIXIN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M10" evidence="2">
        <location>
            <begin position="788"/>
            <end position="908"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="79"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="177"/>
            <end position="681"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="1019" mass="117042" checksum="61928D62E49D6992" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S141</accession>
    <name>A0A087S141_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00769</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19445">
        <property type="protein sequence ID" value="KFM19445"/>
        <property type="gene ID" value="AAA799P11_00769"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.742"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8783" checksum="3901DC957E3F11E7" modified="2014-10-29" version="1">MSLNEQVSKILENFENVSSSEIVDVLKQIQPQFKSNLTSEYLDGKIQKISDVEDESEKKKQCKALTPYLDWYLQGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S199</accession>
    <name>A0A087S199_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TPR repeat domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00704</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19503">
        <property type="protein sequence ID" value="KFM19503"/>
        <property type="gene ID" value="AAA799P11_00704"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.674"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001440">
        <property type="entry name" value="TPR_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13174">
        <property type="entry name" value="TPR_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="10"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="44"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="78"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="112"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="273" mass="30860" checksum="EF163113810866C3" modified="2014-10-29" version="1">MGLFGKKENPEDLMYEGMGMLEKNQPKAAISIFNKVLKQEPENTEALLQKGLALNLVKKYQDAITCFDKLIEIDPKDAQALNNRGISMAETGNIQGAAEYYDKAIEADPKYASAYFNKGVLLDKLQEHEEALKVLEKAITIDPRKPNAMIYKGIVLGKLKRNEEALNCFSNVCKKYPNNLDAFFQKGVQLAELGQHKKALDVFKDLSKKYKDNVNVIYAKSRSLAALEKYPESLELLKKAVSTSPKVIRAWAKEEPIFTKLHSNDQFRKIVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B2</accession>
    <name>A0A087S1B2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00717</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19516">
        <property type="protein sequence ID" value="KFM19516"/>
        <property type="gene ID" value="AAA799P11_00717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036280">
        <property type="entry name" value="Multihaem_cyt_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48695">
        <property type="entry name" value="SSF48695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="136" mass="16016" checksum="664284D8A0C44027" modified="2014-10-29" version="1">MGLFSRKPSFCTICNKELTHKHKPKREWNIKGPLCGDCHFEKQKEYYEGKVRQPCVECGKTQKITDLWEPRWQWDMEGLLCKPCFDKKEESHGKKKNFCALCGGKMGLIRYNPKGKWNIEGQLCRKCWDEKKAELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G4</accession>
    <name>A0A087S1G4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative nitrate transport ATP-binding protein NrtD</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nrtD</name>
        <name evidence="5" type="ORF">AAA799P11_00557</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19568">
        <property type="protein sequence ID" value="KFM19568"/>
        <property type="gene ID" value="AAA799P11_00557"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.541"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="28436" checksum="97DE57672F7BC5A5" modified="2014-10-29" version="1">MTKLEAKNIVKYFSHDSHKLKALGGVDLKVESGDFVCLIGPSGCGKSTFLRIVAGLEKPDDGQILFDGRPVSETGPERIMVFQEGALFPWLTVQDNVEFGLKMAGIPKEERSKISHRYLDMMQLTKFTDSYTFQLSTGMKQRVAIARALVMDPDVLLMDEPFAALDAQTRDLLLVEMQLIWEKTKKTILFVTHSVAEAAVLGTKVAVFSNRPSTIKKEVDNNFPRPRVTEDESLLKFQQDLLSELRPEVKKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I5</accession>
    <name>A0A087S1I5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00578</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19589">
        <property type="protein sequence ID" value="KFM19589"/>
        <property type="gene ID" value="AAA799P11_00578"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.563"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="199" mass="23126" checksum="A094B0CA03F3FDF4" modified="2014-10-29" version="1">MLKEKLGANRQVHNQKKETTRSITYRLPEKLVNELETEATMKSISQNVLVKQILEKYVQWDRFSNKIGMIPVPKGILESLGSELDGKDIDEIITLIFPMIKDTVLFIKGGYDLKRCIETLEDYMRASGMNSDHRIEGDMHIFLIQHELGMKWSVFTEQLLTQIFRSFLPDKELKFQTTDSTVILTVQLGSDFNEHDYHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J7</accession>
    <name>A0A087S1J7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nitrogen regulatory protein P-II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">glnB</name>
        <name evidence="1" type="ORF">AAA799P11_00590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19601">
        <property type="protein sequence ID" value="KFM19601"/>
        <property type="gene ID" value="AAA799P11_00590"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.574"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30115">
        <property type="entry name" value="PTHR30115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="104" mass="10974" checksum="5874D3C929E40FB9" modified="2014-10-29" version="1">MKKVEAIVNESAENAVIEAMRKVGISGVTVSKVQGQGAQDPPLVGEYFSRVLIVCVVDDPKLDEIIDAIASAACTGTKGDGKVYVTDVCDALDICTKKRGTMDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J8</accession>
    <name>A0A087S1J8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sec-independent protein translocase protein TatA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tatA</name>
        <name evidence="8" type="ORF">AAA799P11_00591</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19602">
        <property type="protein sequence ID" value="KFM19602"/>
        <property type="gene ID" value="AAA799P11_00591"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.575"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003369">
        <property type="entry name" value="TatA/B/E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02416">
        <property type="entry name" value="TatA_B_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="115" mass="12715" checksum="FAFD93BE8DB6FEB6" modified="2014-10-29" version="1">MIDYSLNVAGSEWIIIIFVALVLILGTGKLPGAARKLGKAVNEYNKTKNDIQDHMKEVTDEAPKISGPVESERQKLEVIAKSIGVKVEGKTDDELRKIISDKIGQKKIDEPENNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K0</accession>
    <name>A0A087S1K0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATP-dependent RNA helicase RhlE protein</fullName>
            <ecNumber evidence="3">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00593</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19604">
        <property type="protein sequence ID" value="KFM19604"/>
        <property type="gene ID" value="AAA799P11_00593"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.577"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018973">
        <property type="entry name" value="MZB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09369">
        <property type="entry name" value="DUF1998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="127"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="325"/>
            <end position="479"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="815" mass="92646" checksum="6962EA4A517EAEAE" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S9</accession>
    <name>A0A087S1S9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00677</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19683">
        <property type="protein sequence ID" value="KFM19683"/>
        <property type="gene ID" value="AAA799P11_00677"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="53" mass="6250" checksum="2014F2F7DEE84A3C" modified="2014-10-29" version="1">MLGIDQLLINRQIYKGRFEESYEGNMAEQTKQWWEGLGKELEIDIETLDESNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W6</accession>
    <name>A0A087S1W6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19720">
        <property type="protein sequence ID" value="KFM19720"/>
        <property type="gene ID" value="AAA799P11_00460"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.440"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="204" mass="23385" checksum="CB09F0411BE0D94D" modified="2014-10-29" version="1">MRKLGTIDLEVLHLAVKGNGTFDETHLENSELKRLGVGKILDTLGSLKDRKFISLNSNGSFSITPVAREILWGKEIPTWAKILRLLQIKSCSMEQIVDILRMPEVEIQQEVEKLRQNQFVLMSPQRQDEKIIKVYEILPEGVEEIDKTETEGFDKIKFGEIKSEVEILSLIDDVIKDIQDSQIELENKTKIIDKLSKLKTKLNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y5</accession>
    <name>A0A087S1Y5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anthranilate phosphoribosyltransferase protein</fullName>
            <ecNumber evidence="2">2.4.2.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00479</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.18" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19739">
        <property type="protein sequence ID" value="KFM19739"/>
        <property type="gene ID" value="AAA799P11_00479"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.462"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004048">
        <property type="term" value="F:anthranilate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="7"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="8867" checksum="2FB2689C92A7FE3E" modified="2014-10-29" version="1">MTDAYVMLNCELGAEAEIVEKLKELEQVVDVFETIGTHDMLVKLQAENFEKIREIVSWNIQKLDKVRSTATLIKKDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S208</accession>
    <name>A0A087S208_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00507</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19762">
        <property type="protein sequence ID" value="KFM19762"/>
        <property type="gene ID" value="AAA799P11_00507"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.488"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="12491" checksum="321E64D4BF023EFE" modified="2014-10-29" version="1">MAELKVQGSGGYVIADLTDEQAKKADLGVGKLFLAPIGKIETGKMLKHYCNNCETEFDNPPKIQLEESPNEEVADNLILIERGQYVCEKCNGVIGEYREFQKKGEVGNARPSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S220</accession>
    <name>A0A087S220_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiosulfate-3-mercaptopyruvate sulfurtransferase protein</fullName>
            <ecNumber evidence="2">2.8.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00519</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19774">
        <property type="protein sequence ID" value="KFM19774"/>
        <property type="gene ID" value="AAA799P11_00519"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.501"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004792">
        <property type="term" value="F:thiosulfate sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001307">
        <property type="entry name" value="Thiosulphate_STrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00380">
        <property type="entry name" value="RHODANESE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="22"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="152"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="268" mass="30207" checksum="E2AC8714E3E76F5A" modified="2014-10-29" version="1">MCCLTESGNITTDVDSLRSEIRDKSVRVIDVRREDDYKKDHISTAVNLPLANLLSDDSPERVVKLVNSMGIDDETRVVVYDDTFGALASRVAWTLEYLGHSDVSLLETTYSNWKSLGLESDSQTPEVQSKEHSVKLQPDILATSDYLENAKQRDDVVLIDNRERLNYLEQHIPGAISLPYRTLASNDKILRPKDDMKRLLDNRGITGDAEIITYCGSVGTLSGLAYYALKTAGLPNAKLYVRSFKEWKNLQKPTVKQEDANYWDLSAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S226</accession>
    <name>A0A087S226_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sigma 54 modulation / protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19780">
        <property type="protein sequence ID" value="KFM19780"/>
        <property type="gene ID" value="AAA799P11_00525"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.507"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036567">
        <property type="entry name" value="RHF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003489">
        <property type="entry name" value="RHF/RaiA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02482">
        <property type="entry name" value="Ribosomal_S30AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69754">
        <property type="entry name" value="SSF69754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="12938" checksum="BDB40FBEE72E1103" modified="2014-10-29" version="1">MTEKIPLYVIGLSKDDPANELIVSKFGGALEKVQQVLPDIIEAKISVKSQNPEGSRTHYDVTATVKTSKNQLVYTESDWDILKICDQLIKKLEREMPKHDDKRQRDSIRKKDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S231</accession>
    <name>A0A087S231_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Thioredoxin reductase protein</fullName>
            <ecNumber evidence="5">1.8.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">trxB</name>
        <name evidence="5" type="ORF">AAA799P11_00530</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.9" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19785">
        <property type="protein sequence ID" value="KFM19785"/>
        <property type="gene ID" value="AAA799P11_00530"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.512"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019430">
        <property type="term" value="P:removal of superoxide radicals"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008255">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_2_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005982">
        <property type="entry name" value="Thioredox_Rdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01292">
        <property type="entry name" value="TRX_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00573">
        <property type="entry name" value="PYRIDINE_REDOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="4">
        <location>
            <begin position="27"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="334" mass="36468" checksum="F3A55A6C6D3F042E" modified="2014-10-29" version="1">MAADSGATVQESKDDGPKIPDKKKTKFDVVIIGAGPSGYTAGIYCSRAGYDTLILSGILPGGQLVNTTEVENYPGFENGIMGPDLMMIEMRKQCQRMGTTIVDDEAVDVDFRRKPLKVLTASEEYEGRAIIIATGANPRKLGLEGEETFGGKGVSYCATCDGPFFRNQELVVVGGGDSAVEEATFLTKFATTVHLVHRRDELRASKVMQDRAQSNEKIKFHWDSAVTDIKGDQKVQEVVLKNLKTNEESKLTVGGLFVAIGHEPNTKLFKNQIDLDEEGYVILKNKTHTNIEGVFAAGDVHDRIYRQAITAAGYGCMAAIDVDKYLTESADKQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A0</accession>
    <name>A0A087S2A0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00383</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19854">
        <property type="protein sequence ID" value="KFM19854"/>
        <property type="gene ID" value="AAA799P11_00383"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.372"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="107" mass="12271" checksum="B0DBE534BF3CEB16" modified="2014-10-29" version="1">MTIIMDFHPKDLPVAKTYDLKDEKDASNAVEDMVSIGFQGKKEGFRVLMPKESKLAKRIGYTVTTGVTHGLRQKNEIRDVRYWTYHHDDKHYAIVLISNSALTELGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D6</accession>
    <name>A0A087S2D6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S27ae</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rps27ae</name>
        <name evidence="8" type="ORF">AAA799P11_00429</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the eukaryotic ribosomal protein eS31 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19890">
        <property type="protein sequence ID" value="KFM19890"/>
        <property type="gene ID" value="AAA799P11_00429"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.408"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00777">
        <property type="entry name" value="Ribosomal_S27ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002906">
        <property type="entry name" value="Ribosomal_S27a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022845">
        <property type="entry name" value="Ribosomal_S27ae"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01599">
        <property type="entry name" value="Ribosomal_S27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01402">
        <property type="entry name" value="Ribosomal_S27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Ribosomal_S27" evidence="7">
        <location>
            <begin position="11"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="29"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="57" mass="6345" checksum="2D2269BA7141710C" modified="2014-10-29" version="1">MAGKKGSSPNVYAYYKVDGDKVSRIKKICSRCGKGVFMSEHKDRHTCGKCGLTEFNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E7</accession>
    <name>A0A087S2E7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Phosphomethylpyrimidine synthase protein</fullName>
            <ecNumber evidence="9">4.1.99.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">thiC</name>
        <name evidence="9" type="ORF">AAA799P11_00440</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.17" evidence="9"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19901">
        <property type="protein sequence ID" value="KFM19901"/>
        <property type="gene ID" value="AAA799P11_00440"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.421"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038521">
        <property type="entry name" value="ThiC/Bza_core_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002817">
        <property type="entry name" value="ThiC/BzaA/B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30557">
        <property type="entry name" value="PTHR30557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01964">
        <property type="entry name" value="ThiC_Rad_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00407">
        <property type="entry name" value="phosphomethylpyrimidine_syntha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00190">
        <property type="entry name" value="thiC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="438" mass="48251" checksum="054D0ABE9C13ED13" modified="2014-10-29" version="1">MTAARRGVATDEMKQVAKDEDVSLDWLIPKIAKGSIIIPSNNCRPQKIHNVGIGKGLKTKVNVNIGTSTLNVNLEEEIEKAKVAVKYHADTMMDLSDGGDVKHIRKTLLETAPITFGTVPIYEAYNYGVEVHKNPLNLTEDDYLNAFENNAKDGVDYTTIHCGITKDIAKRILKVQRHGGVVSKGGTITAAWMLKHDKENPYLTHYDYLVEMAKKYDVTFSLGDALRPGSILDSHDELQVQEMINISQLTKRAHEQDVQVMVEGPGHVPLNEVAANVRLAKSLIGDVPYYVLGPLVTDVASGHDHIASAIGAAVSASEGVDLLCYLTPSEHLALPNAEEVKAGLIAYRIAAHAGDLVKIRDKAIKWDMEMTEARRTLDWEKQLALSIDPEEAAKIHSRTGQHPGNNVPCTMCGGACVYMMLPQQKKYEKENENLQQVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2F2</accession>
    <name>A0A087S2F2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">3-phosphoshikimate 1-carboxyvinyltransferase</fullName>
            <ecNumber evidence="7">2.5.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">5-enolpyruvylshikimate-3-phosphate synthase</fullName>
            <shortName evidence="7">EPSP synthase</shortName>
            <shortName evidence="7">EPSPS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">aroA</name>
        <name evidence="9" type="ORF">AAA799P11_00445</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>3-phosphoshikimate + phosphoenolpyruvate = 5-O-(1-carboxyvinyl)-3-phosphoshikimate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21256"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57701"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
            <dbReference type="EC" id="2.5.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 6/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the EPSP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.19" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19906">
        <property type="protein sequence ID" value="KFM19906"/>
        <property type="gene ID" value="AAA799P11_00445"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.426"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003866">
        <property type="term" value="F:3-phosphoshikimate 1-carboxyvinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01556">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00210">
        <property type="entry name" value="EPSP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006264">
        <property type="entry name" value="EPSP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000505">
        <property type="entry name" value="EPSPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01356">
        <property type="entry name" value="aroA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="8">
        <location>
            <begin position="7"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate-3-phosphate binding" evidence="7">
        <location>
            <begin position="20"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoenolpyruvate" evidence="7">
        <location>
            <begin position="88"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate-3-phosphate binding" evidence="7">
        <location>
            <begin position="161"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="305"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="333"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="336"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="378"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="422" mass="45766" checksum="394B8C94AAA2B36E" modified="2014-10-29" version="1">MKCKVEKSKISGEIVCPPNKSYTHRAIFLASLAGNNSKVENVLLSADTIATIEACKKFGAEIETENSSIIVKNPIKFDKIVPEINTENSGTTIRIASGIAGLFTEEITLTGDKSLQKRPMQPLLDALSSIGAQCQSTDGKPPIKIKGKITGGDVTIPGNFSSQFISALLISAPLTENGINLSIKDNLVSKPYLDATIATMRKFGVSVQTLIPYKRYNISPQVYKTASFTVPIDFSSLALLLSAVVLNGDETIIKGNIGNLPQGDEVFIDILEQLGVTVSIDENEIKIKTPEKLKGGRFDLSNSPDLLPPLAILALNSEKPIEIVNVKHARLKETDRIAITSRELTKLGIKVQEKEDGLVLESSGELYGAELNSENDHRLFMAFCIAGMYVGNCVVTDPESVQVSYPNFVEEMNRIGAIIQPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M0</accession>
    <name>A0A087S2M0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00278</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19974">
        <property type="protein sequence ID" value="KFM19974"/>
        <property type="gene ID" value="AAA799P11_00278"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="6646" checksum="5133CF3EC71E071F" modified="2014-10-29" version="1">MAENFQDSDKYETVTIESKVREGVFHKVVKDLDSGKAVSCSCKCWSKGGKACAAMRSIGVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P0</accession>
    <name>A0A087S2P0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00298</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19994">
        <property type="protein sequence ID" value="KFM19994"/>
        <property type="gene ID" value="AAA799P11_00298"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.292"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="140"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="204" mass="23460" checksum="7769EC800CB89810" modified="2014-10-29" version="1">MLSKVNKDEEAQLQWELESKRIQKVKNPAEQSKEIMESVVESTPEPEKEELSEININTSYDEKPSTELNSAALLDTVSDAEVNSRITFEEFTDEKTLISHDAFGNKQMKIKVLEVSDETPPMKWKFGDRVKVTKILITIKHLTTQEVEEAEFDVEAIERELQEKRHYTSTNRWIPAEDIKNGYVVGSKHTRLISDAAALDYIVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q1</accession>
    <name>A0A087S2Q1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00309</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20005">
        <property type="protein sequence ID" value="KFM20005"/>
        <property type="gene ID" value="AAA799P11_00309"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.303"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="275" mass="30710" checksum="DB219F10247D7442" modified="2014-10-29" version="1">MFDETIKNIVLLKQEFAKNYSGSAHIQEVLPVADSAKLSLDESDLKHLHNFAKNNPIYINSYKEKILGVDCVVYEGDINDYWLNSIKHGTSCQPFYPTWIISAYVMALTAKKLGYTELVDIGSGDGRIAFCGKILGFATHSIEIDDGLVELQNIICKCTKQNFAPHCEDALEYDYSKLQLSKPVFFIGGLPQMGGDMLATSIILKINSMNNLKNSTGIVFAGTHSKRQLSGNIADGGWSSLIQEHNLHVLKTVLLPTVWTFDQTTETPYIYTKFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R4</accession>
    <name>A0A087S2R4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00323</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20018">
        <property type="protein sequence ID" value="KFM20018"/>
        <property type="gene ID" value="AAA799P11_00323"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="107" mass="12243" checksum="967CC311DE0AD95D" modified="2014-10-29" version="1">MKITEEIYTDPESISYRNLPLNKVGTVRASMSKDRSDTKLVYDMEFGLNLFVLQILSDKGILQKKTHDMRTEFVFPEGLSSKEKEILERFFGGMANKTGLVFENTIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S1</accession>
    <name>A0A087S2S1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YozE_SAM_like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20025">
        <property type="protein sequence ID" value="KFM20025"/>
        <property type="gene ID" value="AAA799P11_00330"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023089">
        <property type="entry name" value="YozE_SAM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036806">
        <property type="entry name" value="YozE_SAM-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06855">
        <property type="entry name" value="YozE_SAM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140652">
        <property type="entry name" value="SSF140652"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YozE_SAM_like" evidence="1">
        <location>
            <begin position="3"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="71" mass="8529" checksum="A2D9FEF66B60D097" modified="2014-10-29" version="1">MISFRIWIRQYEKEETPIGDLARDISIDNQFPKKNDFQIHYDYLESKNACNNALITLEFAWNLYQSRIIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T7</accession>
    <name>A0A087S2T7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LOR-SDH bifunctional protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00351</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20041">
        <property type="protein sequence ID" value="KFM20041"/>
        <property type="gene ID" value="AAA799P11_00351"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.340"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd12144">
        <property type="entry name" value="SDH_N_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2690">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005239">
        <property type="entry name" value="CHP00300"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007545">
        <property type="entry name" value="LOR/SDH_bifunc_enz_cons_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043009">
        <property type="entry name" value="LOR/SDH_bifunc_enz_cons_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04455">
        <property type="entry name" value="Saccharop_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00300">
        <property type="entry name" value="TIGR00300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Saccharop_dh_N" evidence="1">
        <location>
            <begin position="5"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="407" mass="44838" checksum="D49E87AE91829203" modified="2014-10-29" version="1">MSKFSQEIEVSGHLIDSLILTKIFDKIMDLQGEFQVQEINIGKRKKDQSYARLLVKGKNQKHLDEILQTIYREGAVSKVQKEITLKKSPKNNVMPDNFYSTTNNHTQVFHKGKWIQVENMMMDKCIVVKGNRAFCVPVRDVKKGDQIIVGEGGVKINPPERPREGSNVFEFMGSSSSSERPTQHIAKKVADDIYNTKKSGGKIVIVGGPAIVHTGASDAVSELIRSGYIDGVLAGNALAVHDIEYATIGTSLGMNVHDATLAYHGHRNHMDAINSVFKAGSIANMVKTKKLTKGIMYECVKNKVPFVLAGSIRDDGPLPDVITDVAQAQKEYKKVLKDAKMVIMISTMLHSIATGNMLPANVKVIVVDINQPTVTKLMDRGTWQALGIVSDVGAFLPMVAQQIRKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U1</accession>
    <name>A0A087S2U1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetyl-coenzyme A synthetase protein</fullName>
            <ecNumber evidence="4">6.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">acsA</name>
        <name evidence="4" type="ORF">AAA799P11_00355</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20045">
        <property type="protein sequence ID" value="KFM20045"/>
        <property type="gene ID" value="AAA799P11_00355"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.344"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003987">
        <property type="term" value="F:acetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032387">
        <property type="entry name" value="ACAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16177">
        <property type="entry name" value="ACAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACAS_N" evidence="3">
        <location>
            <begin position="33"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="91"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="2">
        <location>
            <begin position="532"/>
            <end position="608"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="642" mass="71792" checksum="B1684CC32077D2D0" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2V2</accession>
    <name>A0A087S2V2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphonate ABC transporter periplasmic phosphonate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00366</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20056">
        <property type="protein sequence ID" value="KFM20056"/>
        <property type="gene ID" value="AAA799P11_00366"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.355"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="15255" checksum="2755C22CA0407576" modified="2014-10-29" version="1">MTGSSGFVRPMGTLVTEGHVTIEGDDIVALESALANNFESYTFAGGYKAALTLLLEDKVDVAFGSDIAPQKYLELEDQKRLRPVTTIGPVPSHVFMVSADMSESTKNALVDTLIELNYDEHNSILTDLYGAEALVPTTTNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S301</accession>
    <name>A0A087S301_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein ta</fullName>
            <ecNumber evidence="2">1.1.1.267</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tas</name>
        <name evidence="2" type="ORF">AAA799P11_00176</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.267" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20105">
        <property type="protein sequence ID" value="KFM20105"/>
        <property type="gene ID" value="AAA799P11_00176"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030604">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="16"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="322" mass="36020" checksum="E071BB0B5AB247A0" modified="2014-10-29" version="1">MIKKRKLGKTDLMVSEIGLGGYQLGGFSKINDIPIAFGDMDEKNAINLINKAVDFGVTTFDTADFYSLGKSEIRLGKAVKQFRDEICIFTKAGSVASYTDIGFEIDLSYHHLMASVDRSLQRLDTDYVDVFQIHKAPQSEADFQSVEKAFAKIKSEGKARYCGASVGIKYEVGIELMKRGLVDSLQLYFSLIDPIPLKELFPMAKKEGVGIIIAEPLGQGLLTGKYKPDHVFPNSDIRNHVYDPNLLQKKLQKSQEFQFLINQSRNASQVALSYVLSRDEVSTCIPGSKSIEQLESNSFASEIILSPDELEKIKNIQQKWIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S302</accession>
    <name>A0A087S302_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gluconate 5-dehydrogenase protein</fullName>
            <ecNumber evidence="1">1.1.1.125</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">idnO</name>
        <name evidence="1" type="ORF">AAA799P11_00177</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.125" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20106">
        <property type="protein sequence ID" value="KFM20106"/>
        <property type="gene ID" value="AAA799P11_00177"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008678">
        <property type="term" value="F:2-deoxy-D-gluconate 3-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="28380" checksum="B86EDD8A0B9D3892" modified="2014-10-29" version="1">MRDIFSIKNKVIIVTGGGKGIGYDLAKNMAERNAYVYAIDIEFPNVIQNTNPFLFQEKCDITNYKKFEKVCDKIFKNYKKIDVLINCAGVSFSEQKQNTFYPIEKWISTINVNFTAAFNCSQTVIKHMIKNSTGSIINITSIVAEQGFPRNPAYNASKGGLKMLGKALAKDWGRLGIRVNNLGPGFIKTDITKGRYNNKKSKKIREERTLLGRWGKTDDLIGPCIFLASDASRYVTGQDLYVDGGWLTNSGIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S313</accession>
    <name>A0A087S313_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00188</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20117">
        <property type="protein sequence ID" value="KFM20117"/>
        <property type="gene ID" value="AAA799P11_00188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="280"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="308"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="355"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="391"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="423"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="460"/>
            <end position="478"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="497" mass="55836" checksum="A8FB606848286D6D" modified="2014-10-29" version="1">MSEIRVTYSGLISFLVGLSTLVTGLMFSLIITRTLNPQEYGTWGLISSLFVYAVIINGIVTFWTAREIARGEKTGKTAVFFSEILSVGGILIYLIAAYFVSPEANVEQNILFFAALLIPLTFLHKVLSTINTGWKPEITSYAIIVTEIIKIPLILIFLILFDLGISGLIITLVISSVIGSLVQVIKSRQKLRFSINKIHIKKWLKISWLPSYHRISTILFASDIVIFSVIIGSVEGIAFYSAALIVASIVSQSGKISSTVYGKLLGGGERKYLENNLMQLFYFAIPLATISILYAKPILFALNPLYEISVPVVIFLTIRTFFFMLTGTFSSFLTGIEQVDMDKNSTFKDYIKSKLFVIPNLQIIQYGVYLLILTIYLTVFKDQVSQIELVVSWSIIGMATQIPLSLYLYRVVKRNFEFKLNKFLITTYSVISIGSFGGSFVLTEVFLIYKSNIFEFLPNLIGFVLLGIAVYLILTYVVDDRTRKLFKAAINEVKKIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S315</accession>
    <name>A0A087S315_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Methyltransferase domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20119">
        <property type="protein sequence ID" value="KFM20119"/>
        <property type="gene ID" value="AAA799P11_00190"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="281" mass="32219" checksum="501576F9313CFDE8" modified="2014-10-29" version="1">MSNLTYFVRVLKHPGFVLNENFLLHPIASFCTSKKILQNNMSLLDGIQKLTDESLENLKQYLDDISNNTKLLNHLDTQFDTYYDYIGKSDLNNLKFSKENPAGRLNRQSQGNAGFFLYVLVRALKPDIFVETGVSAGESSTFILQAMHDNNFGKLYSVDLPRATVEKGLTTIIPENKSSGWLIPEYLKNRWELRLGKSEEILPKLFSTLKQIDVFFHDSLHTYDHMLFEYNACWNYLKKDGILFSDDIVVMNGKGHSPLVDFADMQQKEIVVYNVLGGLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S329</accession>
    <name>A0A087S329_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00204</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20133">
        <property type="protein sequence ID" value="KFM20133"/>
        <property type="gene ID" value="AAA799P11_00204"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.203"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="189" mass="21516" checksum="D7ED42FCFF64105C" modified="2014-10-29" version="1">MNKIVVIPIIVIITIIAIAAISFEESDVMEVEDVMDKELRPTEEVSPEIQDKLEDIERTNLENKYTPKPREWITSGPFQIDRSEYVLGEKIFLVIGGLNNDEKGQIAFLRPLNSTHYSVYVTIPFDGTKKSAFNYYVEPGLSKANEICSIEDIVGEWTIVFRGTDYPNLKFSITDEILPGVEEEYKTVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S335</accession>
    <name>A0A087S335_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyrophosphatase PpaX protein</fullName>
            <ecNumber evidence="2">3.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAD-like hydrolase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20139">
        <property type="protein sequence ID" value="KFM20139"/>
        <property type="gene ID" value="AAA799P11_00210"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.209"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004427">
        <property type="term" value="F:inorganic diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="306" mass="34367" checksum="2879FC70C5F74E23" modified="2014-10-29" version="1">MNNQKFDSIIFDCDGVLVDITQSYDKTIDKTCRYILKEFAGIDSIIIDHKIIDGFKASGGFNDEVDLTYAAALSLYASNKLNKEPSEFIYEVISNADKTGIRSVQSYLESVCDISEFLSKLGSLDDRHNNPVYSVFDQLFFGPELYEKLFEKQSKFSEEGMISNDKVILSRSLLETLQKEFGKKLAVVTGRGIESIRYSLKDMLNYFDTKSSAFLEDEPRELAKPNPAALIRAIQSMESKNCLYVGDSMEDYMMAKDATQAGYSTTFCAIVGTSTNPKDRRNLFADSSVDLILESINDIPKVLNLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S337</accession>
    <name>A0A087S337_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 6">Histidinol dehydrogenase</fullName>
            <shortName evidence="6">HDH</shortName>
            <ecNumber evidence="6">1.1.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">hisD</name>
        <name evidence="11" type="ORF">AAA799P11_00212</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H2O + L-histidinol + 2 NAD(+) = 3 H(+) + L-histidine + 2 NADH</text>
            <dbReference type="Rhea" id="RHEA:20641"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="ChEBI" id="CHEBI:57699"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="9">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 9/9.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 10">Belongs to the histidinol dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.23" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20141">
        <property type="protein sequence ID" value="KFM20141"/>
        <property type="gene ID" value="AAA799P11_00212"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.211"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004399">
        <property type="term" value="F:histidinol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06572">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001692">
        <property type="entry name" value="Histidinol_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022695">
        <property type="entry name" value="Histidinol_DH_monofunct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012131">
        <property type="entry name" value="Hstdl_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21256">
        <property type="entry name" value="PTHR21256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00815">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000099">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00083">
        <property type="entry name" value="HOLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00069">
        <property type="entry name" value="hisD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00611">
        <property type="entry name" value="HISOL_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 6" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="2 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="4 6 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="319"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="352"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="406"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 9">
        <location>
            <position position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00016531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="420" mass="45111" checksum="9B88B70788A623E9" modified="2014-10-29" version="1">MKIISINNSEQFLKKIGTKNSSKNQKIVESILKNVKNNGDVALKKYEKKFGARISSLRVSQRDITSAYSKVSKEDISAIKLAKSRLSKAESAVRRQFKDITVKFNGTKLSKSFVPIDSVGCYVPGGAARYPSSAIMSVIPAKIAGVKRIVVVSPPNSSGNIDPLTIVAADICGATEIYKTGGAQSIVALAYGTSSIKKVNKIVGPGGPFVTLAKYLVSNVVSIDMMAGPTELGIVIDSAADVDVAALDLISQAEHSSDTFCYALTSSNSIAKKLQSSVNSKLKDIQRAKIVKFSLESNGFIGVCKTSEIIDIANNLAPEHLEIISKNPKRWSKIKNPGLILYGKSSPSSASDYLLGSNHILPTNGFGKTRGSLSVLDFVKLLTKIETTKKDLQKISKSMKNLTLAEGLPNHYEAVRGRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S349</accession>
    <name>A0A087S349_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00229</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20153">
        <property type="protein sequence ID" value="KFM20153"/>
        <property type="gene ID" value="AAA799P11_00229"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.223"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="11923" checksum="F585A07B8FE09E92" modified="2014-10-29" version="1">MSMAESKVTGIIKSLNVLEDDIDSLNSKVGDMKKQLSVKAQNEIDALMEKTREMATKEAEVLINASKEKATAESAKIAQEGEAKLSEIQSKIDANFDDAVKHVVSTVLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S354</accession>
    <name>A0A087S354_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 10">tRNA (cytidine(56)-2'-O)-methyltransferase</fullName>
            <ecNumber evidence="6 10">2.1.1.206</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 10">tRNA ribose 2'-O-methyltransferase aTrm56</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">AAA799P11_00234</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>cytidine(56) in tRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(56) in tRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42968"/>
            <dbReference type="Rhea" id="RHEA-COMP:10308"/>
            <dbReference type="Rhea" id="RHEA-COMP:10309"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74495"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.206"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5 10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the aTrm56 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.206" evidence="6 10"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20158">
        <property type="protein sequence ID" value="KFM20158"/>
        <property type="gene ID" value="AAA799P11_00234"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.228"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008175">
        <property type="term" value="F:tRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002128">
        <property type="term" value="P:tRNA nucleoside ribose methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00077">
        <property type="entry name" value="tRNA_methyltr_aTrm56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002845">
        <property type="entry name" value="tRNA_mtfrase_aTrm56"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42197">
        <property type="entry name" value="PTHR42197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01994">
        <property type="entry name" value="Trm56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016123">
        <property type="entry name" value="UCP016123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10 11" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="10 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 10" id="KW-0819">tRNA processing</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="10">
        <location>
            <begin position="108"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003959"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="177" mass="20245" checksum="A9A4BDB06A51B99A" modified="2014-10-29" version="1">MVIEVVRIGQRLVRDDRVTTHVALVSRAFGAETIFMTEINPEIKDTLGKINETWGGNFTVEFIENWKPIIKKKKREGFKIVHLSMYGEKINDIQDKIRGEENLLIVVGAEKVPREIYELADYNVGIGSQPHSEISALAILLDRIQEGQQFEKEFPDAKRKIIPTKTGKNVQVKETRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S366</accession>
    <name>A0A087S366_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Photosystem I assembly protein ycf3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycf3</name>
        <name evidence="2" type="ORF">AAA799P11_00246</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20170">
        <property type="protein sequence ID" value="KFM20170"/>
        <property type="gene ID" value="AAA799P11_00246"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.240"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="106"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="234" mass="26734" checksum="81B9CB30E6F88396" modified="2014-10-29" version="1">MVNLLDPSNVITRMFNAGKYEEMYNYCKKLLEKIPNDMVALQNICLSLIYLEKYQEAITYCDKVLEIKESDTYALKNKIYALESLGQYQQVLKLCEEILSSNPDDSWALNSMGLSLNELNRHKEALEYYEKALALDSNDVTALMNKAISHSYLGDYEIAIEFYDKAQLADSSLKEIPLAKSKLFEKLGDSDNAFLAAQGILNKDMEKIKLAAKENNCSLFHQVCENEFEQLDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S381</accession>
    <name>A0A087S381_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA polymerase sliding clamp</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Proliferating cell nuclear antigen homolog</fullName>
            <shortName evidence="3">PCNA</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 8" type="primary">pcn</name>
        <name evidence="8" type="ORF">AAA799P11_00261</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.</text>
    </comment>
    <comment type="function">
        <text evidence="5">Sliding clamp subunit. Responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotrimer. The subunits circularize to form a toroid; DNA passes through its center. Replication factor C (RFC) is required to load the toroid on the DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 4">Belongs to the PCNA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20185">
        <property type="protein sequence ID" value="KFM20185"/>
        <property type="gene ID" value="AAA799P11_00261"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030337">
        <property type="term" value="F:DNA polymerase processivity factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006275">
        <property type="term" value="P:regulation of DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00317">
        <property type="entry name" value="DNApol_clamp_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000730">
        <property type="entry name" value="Pr_cel_nuc_antig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022649">
        <property type="entry name" value="Pr_cel_nuc_antig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022648">
        <property type="entry name" value="Pr_cel_nuc_antig_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11352:SF0">
        <property type="entry name" value="PTHR11352:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02747">
        <property type="entry name" value="PCNA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00705">
        <property type="entry name" value="PCNA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00339">
        <property type="entry name" value="PCNACYCLIN"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00590">
        <property type="entry name" value="pcna"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 3 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCNA_N" evidence="6">
        <location>
            <begin position="3"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="PCNA_C" evidence="7">
        <location>
            <begin position="124"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM20185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="249" mass="27744" checksum="14F2699136D848D4" modified="2014-10-29" version="1">MLLDAKFTNIGEWKAILQAIGDITEEAMFICNQEGITFRGIDPAHVSLLDITFPKSSFDFFDCHATFFGISVTDFKNILNSAANEDKISLAIDSPHKMKIEINGGLQMKYDLNLVERSEVNTQIPTVNATSKISLSPIILAKIMANIERVSESVTISSIPEKIQFLGSGNIGKAQVDLEKNNSELSSLEVIEDSSSIYSLEYMAKIIRNIGKASNRVNMEYGSQTPMHMLFEMPSMTKVEYYLAPRIEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S385</accession>
    <name>A0A087S385_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Primase 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00265</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20189">
        <property type="protein sequence ID" value="KFM20189"/>
        <property type="gene ID" value="AAA799P11_00265"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015330">
        <property type="entry name" value="DNA_primase/pol_bifunc_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014820">
        <property type="entry name" value="PriCT_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08708">
        <property type="entry name" value="PriCT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09250">
        <property type="entry name" value="Prim-Pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00942">
        <property type="entry name" value="PriCT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00943">
        <property type="entry name" value="Prim-Pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prim-Pol" evidence="3">
        <location>
            <begin position="8"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="PriCT_1" evidence="2">
        <location>
            <begin position="181"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="704"/>
            <end position="738"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="711"/>
            <end position="738"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="738" mass="85228" checksum="E63822EA7AB186B0" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F2</accession>
    <name>A0A087S3F2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Blue copper domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00003</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20256">
        <property type="protein sequence ID" value="KFM20256"/>
        <property type="gene ID" value="AAA799P11_00003"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.3"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="542"/>
            <end position="560"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="573" mass="64422" checksum="466EED4FB9CC2F76" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H2</accession>
    <name>A0A087S3H2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc transporter ZupT protein</fullName>
            <ecNumber evidence="2">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">zupT</name>
        <name evidence="2" type="ORF">AAA799P11_00023</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20276">
        <property type="protein sequence ID" value="KFM20276"/>
        <property type="gene ID" value="AAA799P11_00023"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.23"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="176"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="243"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="268"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="312"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="340"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="373"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="392" mass="41704" checksum="EAF308DE4B9EF76F" modified="2014-10-29" version="1">MELSDNTSKGKVIASGIIPFAFVIIMMAYIFGPGADLLDLGIPLPEITIEKVDFLESEIQATVRNTGPMSVEVVMADVNDRIHPAAIEPDGHLERYETALVRIPFEWNEAEPYIIGITVDDGTRFEKEVEAAAPALQPTLDLAIFFAIIGTYVGIIPVMIGLLWLPFIKKISKSKYHFFLALTAGLLLFLAIDSIEEAIEVSDESLAGSFNGMLLVATAVVLSFLGLYYSGEKLVQRASSSKLAKPVAIALMISIGIGLHNFGEGLAIGAAVGMGSIAFSTFLIVGFALHNTTEGIAIAAPMSKGKLMIGKLAAMGMIAGAPAIFGAWVGGFVYSPFTSVIFLSIGAGAIFQVIIVLMKWLREEGDRNLSSASVASGFAVGMLVMYLTSILV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J4</accession>
    <name>A0A087S3J4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20298">
        <property type="protein sequence ID" value="KFM20298"/>
        <property type="gene ID" value="AAA799P11_00045"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.44"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="82" mass="9242" checksum="000A1EDA7F0B3AF5" modified="2014-10-29" version="1">MKDPHNHAKVGYSMIAVAASLAVIGLMALFMADDVLFADRMQRENTAHFNECKANDFKTDGCEKYWDRINTPISGIYVDLDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M7</accession>
    <name>A0A087S3M7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ATPase of the AAA+ class Posttranslational modification protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00078</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AAA ATPase family. CDC48 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20331">
        <property type="protein sequence ID" value="KFM20331"/>
        <property type="gene ID" value="AAA799P11_00078"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.75"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005938">
        <property type="entry name" value="AAA_ATPase_CDC48"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004201">
        <property type="entry name" value="Cdc48_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029067">
        <property type="entry name" value="CDC48_domain_2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003338">
        <property type="entry name" value="CDC4_N-term_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02933">
        <property type="entry name" value="CDC48_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02359">
        <property type="entry name" value="CDC48_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01072">
        <property type="entry name" value="CDC48_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01073">
        <property type="entry name" value="CDC48_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54585">
        <property type="entry name" value="SSF54585"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01243">
        <property type="entry name" value="CDC48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CDC48_N" evidence="4">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="CDC48_2" evidence="3">
        <location>
            <begin position="100"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="204"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="477"/>
            <end position="611"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="713" mass="78928" checksum="4A09F85BAEDF0C56" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q9</accession>
    <name>A0A087S3Q9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Plastocyanin protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20363">
        <property type="protein sequence ID" value="KFM20363"/>
        <property type="gene ID" value="AAA799P11_00110"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.109"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002386">
        <property type="entry name" value="Amicyanin/Pseudoazurin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002350">
        <property type="entry name" value="Kazal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036058">
        <property type="entry name" value="Kazal_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00050">
        <property type="entry name" value="Kazal_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00155">
        <property type="entry name" value="AMICYANIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00280">
        <property type="entry name" value="KAZAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100895">
        <property type="entry name" value="SSF100895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51465">
        <property type="entry name" value="KAZAL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="domain" description="Kazal-like" evidence="3">
        <location>
            <begin position="30"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="327" mass="35427" checksum="336C2BBF6C73B92D" modified="2014-10-29" version="1">MNFSYGIIGVVGVLAAISIGFIAMSPDEIIEPRAVDDRPTVCTMEWAPVCGIDGETYGNMCMLEAADVKFAHKGECSVDDPMVKPRTEATMQEIPVTPRPMPLLATEGNVLEIESEFIDDNGEIVNHVFYTISATQDGNEILYEESHRHTTVDDSGNLVEVYPIHTTDVISNSDIAIKILVTGLGHDENVATPITSEYEMTITPESKTAEEIDTQVLGDVTSAMPAPSQTHVVETAEGSGGPGCEETNECYIPYSIEIFVGDTVQWNNVDTAAHTVTSGNVNAGPTGVFDSGLFMAGETFEFTFEEAGTYDYFCMVHPWMAGIIKVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R4</accession>
    <name>A0A087S3R4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L15e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00115</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL15 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20368">
        <property type="protein sequence ID" value="KFM20368"/>
        <property type="gene ID" value="AAA799P11_00115"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.113"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024794">
        <property type="entry name" value="Rbsml_L15e_core_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000439">
        <property type="entry name" value="Ribosomal_L15e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_L23/L15e_core_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11847">
        <property type="entry name" value="PTHR11847"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00827">
        <property type="entry name" value="Ribosomal_L15e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01384">
        <property type="entry name" value="Ribosomal_L15e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="SSF54189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="17836" checksum="D319C9D9681F3218" modified="2014-10-29" version="1">MPSRQDQVWIRLWKENAPELRERIVGWRKQNAITRIDKPSRIQRARRLGYKAKQGIIVVRMRVGTGGMRKQRPTGGRRPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRVTQDKELTKRISQTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RM80</accession>
    <name>A0A087RM80_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-carbamoylputrescine amidase protein</fullName>
            <ecNumber evidence="2">3.5.1.53</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01533</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.53" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000110">
        <property type="protein sequence ID" value="KFM14584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14584">
        <property type="protein sequence ID" value="KFM14584"/>
        <property type="gene ID" value="AAA799P11_01533"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050126">
        <property type="term" value="F:N-carbamoylputrescine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM14584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="7652" checksum="8650B3BFA5E8F692" modified="2014-10-29" version="1" fragment="single">ETNLKKIISYIEKAASKNATLCAFPEFMMFYTNSSQPPKQLASLAETINGNFVKTIAKVAKENRIQVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RMN6</accession>
    <name>A0A087RMN6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01529</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000106">
        <property type="protein sequence ID" value="KFM14740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14740">
        <property type="protein sequence ID" value="KFM14740"/>
        <property type="gene ID" value="AAA799P11_01529"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="10946" checksum="50F25EB128E0D081" modified="2014-10-29" version="1" fragment="single">TGIKGQLSLPFGFSASDGPGSIIKADSDSNSLAGENFHLTFFVNIDKNVNIQQYPGTVKVDYSRLRESGVRTAFEDFQFKVTGDSVINVRALEPFLTSLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RMP3</accession>
    <name>A0A087RMP3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01527</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000105">
        <property type="protein sequence ID" value="KFM14747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14747">
        <property type="protein sequence ID" value="KFM14747"/>
        <property type="gene ID" value="AAA799P11_01527"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="35" mass="3711" checksum="859A4BD53CA6E0C1" modified="2014-10-29" version="1" fragment="single">VITIGLISIALPPISSIGFDTTWTREDNAAALIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNZ3</accession>
    <name>A0A087RNZ3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">FO synthase protein</fullName>
            <ecNumber evidence="6">2.5.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fbiC</name>
        <name evidence="6" type="ORF">AAA799P11_01512</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.77" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000092">
        <property type="protein sequence ID" value="KFM15197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15197">
        <property type="protein sequence ID" value="KFM15197"/>
        <property type="gene ID" value="AAA799P11_01512"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034405">
        <property type="entry name" value="F420"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43076">
        <property type="entry name" value="PTHR43076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM15197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="97" mass="11081" checksum="CDA7978D61552EE3" modified="2014-10-29" version="1" fragment="single">MRLLESDDVHLMGLVSGHLTRKQFGKKASFVNNIILNYTNVCITDCKFCAFYRSPGADDSYTLTLDQIESRVKTAWDMFKIRQVLIQGGHNPNLKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPX6</accession>
    <name>A0A087RPX6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrilase protein</fullName>
            <ecNumber evidence="2">3.5.5.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01496</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.5.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000084">
        <property type="protein sequence ID" value="KFM15530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15530">
        <property type="protein sequence ID" value="KFM15530"/>
        <property type="gene ID" value="AAA799P11_01496"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1385"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080061">
        <property type="term" value="F:indole-3-acetonitrile nitrilase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="114" mass="13313" checksum="4D05DDDDB224DC0D" modified="2014-10-29" version="1" fragment="single">ICYDMVFPQVANTLTKKGAQVLLSPSRIVRRGIESWQMYVQVRALENRIPILAANVENRRFGGKSLLVDLVENNKVVNTKLTKLKKEDSISKEFKLEKYQKNRKIRFSDVKKFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQD9</accession>
    <name>A0A087RQD9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01488</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000078">
        <property type="protein sequence ID" value="KFM15693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15693">
        <property type="protein sequence ID" value="KFM15693"/>
        <property type="gene ID" value="AAA799P11_01488"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="62" mass="6882" checksum="5BF2633E97F7B31C" modified="2014-10-29" version="1" fragment="single">MSRAILGKEIHLGEGAVKTLISHLKEAKMIDSTRSGNFLTEKGKKFTSQLQNIIPRECKIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQG6</accession>
    <name>A0A087RQG6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histidine-specific methyltransferase EgtD protein</fullName>
            <ecNumber evidence="2">2.1.1.44</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">egtD</name>
        <name evidence="2" type="ORF">AAA799P11_01484</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.44" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000076">
        <property type="protein sequence ID" value="KFM15720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15720">
        <property type="protein sequence ID" value="KFM15720"/>
        <property type="gene ID" value="AAA799P11_01484"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030745">
        <property type="term" value="F:dimethylhistidine N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019257">
        <property type="entry name" value="MeTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10017">
        <property type="entry name" value="Methyltransf_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_33" evidence="1">
        <location>
            <begin position="3"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="89" mass="10170" checksum="6F3762C6B32C2F75" modified="2014-10-29" version="1" fragment="single">TSSKSIHPKFFYDKKGSDLFEQICSVSEYYPTRTEISILEKLQTELSSFLNGDYRLVELGSGSSIKTRLILDFLTSSQKTTEYFPIDIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQL0</accession>
    <name>A0A087RQL0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATPase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01475</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000073">
        <property type="protein sequence ID" value="KFM15764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15764">
        <property type="protein sequence ID" value="KFM15764"/>
        <property type="gene ID" value="AAA799P11_01475"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1080.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003367">
        <property type="entry name" value="Thrombospondin_3-like_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028974">
        <property type="entry name" value="TSP_type-3_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02412">
        <property type="entry name" value="TSP_3"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103647">
        <property type="entry name" value="SSF103647"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="76"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM15764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="212" mass="23184" checksum="FA2927D99DB9A1A2" modified="2014-10-29" version="1" fragment="single">MIIETXXXXXXXXXXXXDTDGDGIANQFDICPTDPETFNRFADYDGCPDSVPSFAGSLNDADGDRIMDVDDACPLEPERYNGFQDEDGCPDIPPYSSDNDSDLDGIPNSIDQCPTVKETYNMFQDLDGCPDFIADNKGATDSDGDGIIDNRDLCPNQPEIYNGFQDRDGCPDTYGAGDRDLDGIIDALDECPTVKETYNRFQDEDGCPDLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RR17</accession>
    <name>A0A087RR17_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PAC2 domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01459</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000065">
        <property type="protein sequence ID" value="KFM15921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15921">
        <property type="protein sequence ID" value="KFM15921"/>
        <property type="gene ID" value="AAA799P11_01459"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10900">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019151">
        <property type="entry name" value="Proteasome_assmbl_chaperone_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038389">
        <property type="entry name" value="PSMG2_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09754">
        <property type="entry name" value="PAC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="162" mass="17917" checksum="91050A040348E1F7" modified="2014-10-29" version="1" fragment="single">MPKEFPEAEVFEIKKTELKNPIIFAGFVGAGLVGPVAINHIIEKLKMEEIAVMRSKYLPPSTVFMRGRLRHPFRFYANKEGTICAIICEITLRMEGLYSLVASILDWAAIKGSKEIVILDGVASTEHDDKAYCAAEEDLIRTMADKDISMIPQGFITGIPGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSX7</accession>
    <name>A0A087RSX7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01418</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000046">
        <property type="protein sequence ID" value="KFM16581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16581">
        <property type="protein sequence ID" value="KFM16581"/>
        <property type="gene ID" value="AAA799P11_01418"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="43" mass="4967" checksum="0EABBE8D42EC4300" modified="2014-10-29" version="1">MGKEEIKKLVEDSKRSLESEHENFAKSVKDDLSSFKKKALEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTJ3</accession>
    <name>A0A087RTJ3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01411</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000043">
        <property type="protein sequence ID" value="KFM16797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16797">
        <property type="protein sequence ID" value="KFM16797"/>
        <property type="gene ID" value="AAA799P11_01411"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1338"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="109" mass="12909" checksum="89C19379B26DF11C" modified="2014-10-29" version="1">MVKQISLDAWQIQHLADLLEKGSKIVEKTNRPIVLYRQTLEEEEESYEEIVCTLTKGYVIEQMVTSGGILVPSFHQQFVFTIEEYPQELLRKSKDRFLEMIDFLEEQLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTP1</accession>
    <name>A0A087RTP1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01397</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000040">
        <property type="protein sequence ID" value="KFM16845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16845">
        <property type="protein sequence ID" value="KFM16845"/>
        <property type="gene ID" value="AAA799P11_01397"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4750" checksum="F3FB406C6B7C630A" modified="2014-10-29" version="1">MGHKQLVSIQNKEQTQSVEDYIKLLKRLFEKLEQKQNLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUF9</accession>
    <name>A0A087RUF9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Lysine exporter protein LysE-YggA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01383</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000037">
        <property type="protein sequence ID" value="KFM17113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17113">
        <property type="protein sequence ID" value="KFM17113"/>
        <property type="gene ID" value="AAA799P11_01383"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1313"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="49"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM17113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="22780" checksum="82A3E33363B28339" modified="2014-10-29" version="1">MEQFLEFAVLVIVISASGVMAPGPLFAANISYGLREGTKSGIKMATGHAIVELPLVILLGIGVFSLESFPEFRTIISILGAITLFIFAALQIRTVLKNNEFSIKNQKQGALITGVLLSGLNPFFIIWWLTIGFKLISDAMLIWAFSGMLIMFGLHIWMDFAWLGAVSYLASMSKKILSNRNYKVLVIGLSGMLIYFGITFLQEVRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV96</accession>
    <name>A0A087RV96_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">tRNA-modifying protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01358</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17400">
        <property type="protein sequence ID" value="KFM17400"/>
        <property type="gene ID" value="AAA799P11_01358"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1295"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013917">
        <property type="entry name" value="tRNA_wybutosine-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034556">
        <property type="entry name" value="tRNA_wybutosine-synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13930">
        <property type="entry name" value="PTHR13930"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08608">
        <property type="entry name" value="Wyosine_form"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Wyosine_form" evidence="5">
        <location>
            <begin position="83"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM17400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="160" mass="19016" checksum="97BCA86A2C3E09C5" modified="2014-10-29" version="1">MIQRLQDEDALPTQLYLSTNAADYESFVKINKPKYDDSWERWNRTLGMLKHLDTRTVLRITLIRGYNDQIDMIPAFAKMFRESSPHFIEIKSYMHIGRSTNRLEHSNMLEMEEVKRFSEQVAKQSQIFSAMDESFVSRISILQNNERFIDRWIPAYANTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVB5</accession>
    <name>A0A087RVB5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000033">
        <property type="protein sequence ID" value="KFM17419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17419">
        <property type="protein sequence ID" value="KFM17419"/>
        <property type="gene ID" value="AAA799P11_01345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="148" mass="16240" checksum="7D7F6145DA16DCC8" modified="2014-10-29" version="1">MIAVKIVVFXXXXXXXXGIIGLLFSIGMIAPSFAHTTVHVEQYEIEAGWGVEPPVVGIRNEFMLKIIERGEKEGTFTGVTNAFKNVDVTAMFGGATKKIEVNSDPRPGYYFSPVIPTKTGTYLIELKGEIHGVPVXXXXXXXLNLQQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVB6</accession>
    <name>A0A087RVB6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protein YobA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yobA</name>
        <name evidence="4" type="ORF">AAA799P11_01346</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000033">
        <property type="protein sequence ID" value="KFM17420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17420">
        <property type="protein sequence ID" value="KFM17420"/>
        <property type="gene ID" value="AAA799P11_01346"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006825">
        <property type="term" value="P:copper ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046688">
        <property type="term" value="P:response to copper ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032694">
        <property type="entry name" value="CopC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007348">
        <property type="entry name" value="CopC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014755">
        <property type="entry name" value="Cu-Rt/internalin_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34820">
        <property type="entry name" value="PTHR34820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04234">
        <property type="entry name" value="CopC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0186">Copper</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="CopC" evidence="3">
        <location>
            <begin position="14"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="171" mass="18582" checksum="DB499080E9DF633D" modified="2014-10-29" version="1">MMISFISIPFVSAHPFTEETIPSLTSNAPAGTTEVIVYFSEPVDINFSELKVFDTNGDQIDNKDTDYYEGELSLIITTPPLEDGVYTVSTKVLSKVDGHLVPDAFLFAVGDVVIDPSLLDVERPSEIVFLPEAGARFPGLVGQTIXXRSNNCFRSSNCISHNLGNTKQAGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVB8</accession>
    <name>A0A087RVB8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC 3 transport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01348</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000033">
        <property type="protein sequence ID" value="KFM17422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17422">
        <property type="protein sequence ID" value="KFM17422"/>
        <property type="gene ID" value="AAA799P11_01348"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1286"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="176"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="248"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="272" mass="28564" checksum="4EAFCFE2391A67A8" modified="2014-10-29" version="1">MSFEILTYSFMHRALIAGIAIAILCSVVGLFLVLRRYSLFGDAIAHSSFGGVAVGLLAGIYPLWTAYVVSIVSALVITKVKDRFNISGDASIAVLLSSGIAVGLVIIGLSGGFTLDIFSFLFGSILLVSVDDVVLILSLTGGILIVVLLLFRELLYSTFNEEQAKVSGIPVEKINYLIVFMAGLTVVTSIQLVGVLLISALFVIPNVSAIMYGKGFKQTALISIGFSIFSVVAGILVSYVFDITPAGTIVLISIGLLAGTMGIKSAGLLSKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVI4</accession>
    <name>A0A087RVI4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17488">
        <property type="protein sequence ID" value="KFM17488"/>
        <property type="gene ID" value="AAA799P11_01320"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1260"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="142" mass="16062" checksum="043EF0E62CD3FA20" modified="2014-10-29" version="1">MNKIIIIIPILVIIGIFAVMPWDSPEKNNNVAFHVTLADPQLYENGVYTKTFEIKKGEYYFRFVPNGSSPEVLSISLNGDSIEFSENFQLKNTLHETGISEYYTWEYLGENKITILEDQLVAINIDPNGNVMGSVSVDILQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ1</accession>
    <name>A0A087RVJ1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01327</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17495">
        <property type="protein sequence ID" value="KFM17495"/>
        <property type="gene ID" value="AAA799P11_01327"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1267"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="64" mass="6897" checksum="AC0AFEE63596624D" modified="2014-10-29" version="1">MASKAITVGVGIPMIVVGALMAWLWAPMEGDFQNQVELIGSTIGILGIVFFISGLFYTKEPVMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL7</accession>
    <name>A0A087RVL7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nitrogen regulatory protein P-II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01317</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17521">
        <property type="protein sequence ID" value="KFM17521"/>
        <property type="gene ID" value="AAA799P11_01317"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1257"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="11609" checksum="5EB96A10CC7454CA" modified="2014-10-29" version="1">MKRIEATIQADKAGAVSDAIKDIVGGYTIFEGKGRGSGKRQEIRSGRGTGHFTAEYNKVATVITIVDDSDVEKVSSAIGDAAFTGKGGDGIITTSSVESALNIASKKTGSEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWQ8</accession>
    <name>A0A087RWQ8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative tRNA-dihydrouridine synthase 1 protein</fullName>
            <ecNumber evidence="2">1.1.1.35</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dus1</name>
        <name evidence="2" type="ORF">AAA799P11_01300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.35" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000028">
        <property type="protein sequence ID" value="KFM17912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17912">
        <property type="protein sequence ID" value="KFM17912"/>
        <property type="gene ID" value="AAA799P11_01300"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1240"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003857">
        <property type="term" value="F:3-hydroxyacyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017150">
        <property type="term" value="F:tRNA dihydrouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02801">
        <property type="entry name" value="DUS_like_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035587">
        <property type="entry name" value="DUS-like_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001269">
        <property type="entry name" value="DUS_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004652">
        <property type="entry name" value="tRNA_dU_NifR3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01207">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006621">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00737">
        <property type="entry name" value="nifR3_yhdG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dus" evidence="1">
        <location>
            <begin position="11"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="320" mass="36062" checksum="D8BF98FDA811A734" modified="2014-10-29" version="1">MLPKFSSRAFLAPMAGVSDPALRLQCKQMGSGLVVTEFTSIHSIIAKEEQLKENMKTIQEFIEFSEQERPISVQLFGSDLYALEKAATIVEPYFDIIDYNMGCPAPHITQQMAGGSLLQEVNLTQQIFKTLVDAVKKPVTLKIRSGVTEASRFLFRDIAEIAEDEGIQMITFHPRTVSQGYSGNADWKLIKDLKEISSVPIVGNGDITTPEDAKTMLDETNCDYVMIGRGAMGNPFLFEQINDYLKTGSYKEYSFKDRLDSFFDYLHLTNQYKIKFANIKSQAMRFTKGLKGGSKLRAKITFSKNLEDLEKTMHDAYSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT2</accession>
    <name>A0A087RWT2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">5' nucleotidasedeoxy protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01289</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17936">
        <property type="protein sequence ID" value="KFM17936"/>
        <property type="gene ID" value="AAA799P11_01289"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008253">
        <property type="term" value="F:5'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009264">
        <property type="term" value="P:deoxyribonucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010708">
        <property type="entry name" value="5'(3')-deoxyribonucleotidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06941">
        <property type="entry name" value="NT5C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="138" mass="16237" checksum="1FDF3229D5FE49B5" modified="2014-10-29" version="1" fragment="single">MKIALDVDGVLADVIQSWLNYSNSIRQKIQKHEITDWNFWKKFEINRYDFYSELNSCWKNWTSIPPTEENLALVTKNLSDIAQVDIVTARERSTDSFVKKWLEHYNISYDNYVSVIDGPMKADLDYDVFIDDSPLNAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX73</accession>
    <name>A0A087RX73_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01234</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000023">
        <property type="protein sequence ID" value="KFM18077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18077">
        <property type="protein sequence ID" value="KFM18077"/>
        <property type="gene ID" value="AAA799P11_01234"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="63" mass="6603" checksum="F830544F5A71A685" modified="2014-10-29" version="1">MNKIIIAGIIIAISIGIIAVVSNVDDSTYESDIVENQDGETPVPVGKNLKIELREGIGVVGNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXD1</accession>
    <name>A0A087RXD1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative snRNP Sm-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01226</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000022">
        <property type="protein sequence ID" value="KFM18135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18135">
        <property type="protein sequence ID" value="KFM18135"/>
        <property type="gene ID" value="AAA799P11_01226"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="LSM_dom_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sm" evidence="1">
        <location>
            <begin position="7"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="8579" checksum="C4AF7B9A9353B424" modified="2014-10-29" version="1">MSENFSMLFLKCINKKITLRMNNGKTINGMLVEYDEFMNMTLNDAREESNENFKNLGNTLIRGSSITAIVLPDEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI4</accession>
    <name>A0A087RXI4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01219</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18188">
        <property type="protein sequence ID" value="KFM18188"/>
        <property type="gene ID" value="AAA799P11_01219"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1172"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="53" mass="5820" checksum="85DE4BD7ACEE5416" modified="2014-10-29" version="1">MSVEVTCGKCGEKITNMKMLKSLKDVMNPYSGKCPSCGQKLSTSEFSLDVQEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL2</accession>
    <name>A0A087RXL2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01133</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18216">
        <property type="protein sequence ID" value="KFM18216"/>
        <property type="gene ID" value="AAA799P11_01133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="13"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="59" mass="7262" checksum="0477EDF4C5C781CF" modified="2014-10-29" version="1">MTWHKDPRIDELHERHLDHVAQLEKRITFLEEQIIQKDNVIIEQMKIILMLFEKLNLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL5</accession>
    <name>A0A087RXL5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01136</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18219">
        <property type="protein sequence ID" value="KFM18219"/>
        <property type="gene ID" value="AAA799P11_01136"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="58" mass="6917" checksum="24DF9964D214ADFD" modified="2014-10-29" version="1">MKHVFYCDDTNPKKFKIQFNSGSLKKDDTWFLCDVCNQKSAFRSFRISEILLDKFDNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL6</accession>
    <name>A0A087RXL6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01137</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18220">
        <property type="protein sequence ID" value="KFM18220"/>
        <property type="gene ID" value="AAA799P11_01137"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="12695" checksum="3E7FAC42C74283E0" modified="2014-10-29" version="1">MKNCISISDKCELDKNQIFCKLFESINHINLSELELVSCFYNTLSTRILCPKCKLSHTKSRSKVFLTTKSLSYHLTKSHSEDAMDYPTLKESLKFVEIYSVLLQLRLVGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL9</accession>
    <name>A0A087RXL9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18223">
        <property type="protein sequence ID" value="KFM18223"/>
        <property type="gene ID" value="AAA799P11_01140"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="36" mass="3868" checksum="5834147A7ADAC019" modified="2014-10-29" version="1">MAERKNFLLLAIGVGVAGIVIGTVTIWNMVNEILNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN5</accession>
    <name>A0A087RXN5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01156</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18239">
        <property type="protein sequence ID" value="KFM18239"/>
        <property type="gene ID" value="AAA799P11_01156"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1118"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="95" mass="10770" checksum="4AA8C7154FECCCC5" modified="2014-10-29" version="1">MTLDSEFAKQTTDLIQQTLELYKKSGASPRVGEIWNCEKIGDFLCGFFVGEMVGSALSAFQVVHQREPTADEHLEIIELVESHSKEIKEFFAKFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ1</accession>
    <name>A0A087RXQ1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NTP_transf_9 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01177</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18255">
        <property type="protein sequence ID" value="KFM18255"/>
        <property type="gene ID" value="AAA799P11_01177"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1134"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007361">
        <property type="entry name" value="DUF427"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038694">
        <property type="entry name" value="DUF427_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04248">
        <property type="entry name" value="NTP_transf_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NTP_transf_9" evidence="1">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="92" mass="10537" checksum="2BAD7D840675D8B0" modified="2014-10-29" version="1">MQAIWNGEVIAESDDTVVVEGNHYFPIDSIKKEYFEKTDMTSFCGWKGMANYYSVTVNGKTNKDCAWYYAEPNDAAMKIKDMVAFWNGVEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR8</accession>
    <name>A0A087RXR8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01194</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18272">
        <property type="protein sequence ID" value="KFM18272"/>
        <property type="gene ID" value="AAA799P11_01194"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1151"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="14289" checksum="26BAC0089CD61763" modified="2014-10-29" version="1">MKIAVFLALLLVTSSGFAFAEPVSTEIPSGGKTHYVDEQIMIMADISNNQDIPQNFAYLTQVKNDQGIVISLSWLTGSLSPRQSFSPAQSWTPTETGTFHVQVFVWESIDNPEALSPPLSMIINVDQRST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR9</accession>
    <name>A0A087RXR9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18273">
        <property type="protein sequence ID" value="KFM18273"/>
        <property type="gene ID" value="AAA799P11_01195"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="15"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="65" mass="7795" checksum="8C9C739038ECE568" modified="2014-10-29" version="1">MGELPEKFPEYSMMYKTITNQIKILEEQKENASKEAIEELDSKITKYQEELDRIKKMFPNGFFEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXS0</accession>
    <name>A0A087RXS0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01196</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18274">
        <property type="protein sequence ID" value="KFM18274"/>
        <property type="gene ID" value="AAA799P11_01196"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1153"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="8386" checksum="FE9A45E6B8F110CF" modified="2014-10-29" version="1">MNEQEQLMDNLLNVDLEIIDVVRELHQGNWDSDSHKKQVGDLLKIRDEMVQKLMAANGGNHQCDYGHDHHHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ6</accession>
    <name>A0A087RXZ6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Type-1 restriction enzyme StySJI specificity protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_01125</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type-I restriction system S methylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18350">
        <property type="protein sequence ID" value="KFM18350"/>
        <property type="gene ID" value="AAA799P11_01125"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1088"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.220.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000055">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044946">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01420">
        <property type="entry name" value="Methylase_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0680">Restriction system</keyword>
    <feature type="domain" description="Methylase_S" evidence="4">
        <location>
            <begin position="40"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="347" mass="39655" checksum="AE4455A8A797B820" modified="2014-10-29" version="1">MSELVLGSEKTLPNSWSFVFLNDLVTNDHDSLLRGPFGSNLKKSHFISKGFKVYEQKNVIKNDFDLGIYFVNQEKFNELEKFELKTGDMVMTCAGTIGKFAIVPNTIKKGIINSALLKIRLNKSIISEKYFLHLMQSSLIQQNIHDDARGSAMNNLKSVKSLKTIPLPIPPLDEQKRIVREIEDLFSLIENMADQIKLSHTQLDDFFRSFLKNIFSGNITKIWRESSEDSKIDKSFLEKIVSENNGKIPFKSLPEKPRNFCIPSEWTFVLSNDLFTFVTSGSRGWAKYYSDDGSLFLRVTNLNHNSISLDLKKIKRVKLSSKTEGIRTLVRENDIIVSITADGEWLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ7</accession>
    <name>A0A087RXZ7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type I restriction enzyme EcoKI R protein</fullName>
            <ecNumber evidence="2">3.1.21.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hsdR</name>
        <name evidence="2" type="ORF">AAA799P11_01126</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.3" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18351">
        <property type="protein sequence ID" value="KFM18351"/>
        <property type="gene ID" value="AAA799P11_01126"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1089"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009035">
        <property type="term" value="F:type I site-specific deoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006304">
        <property type="term" value="P:DNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013670">
        <property type="entry name" value="EcoEI_R_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08463">
        <property type="entry name" value="EcoEI_R_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="169"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="914" mass="105001" checksum="79F769226D7DB9C2" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF8</accession>
    <name>A0A087RYF8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01082</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18512">
        <property type="protein sequence ID" value="KFM18512"/>
        <property type="gene ID" value="AAA799P11_01082"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1044"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="38"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="7948" checksum="517CC12E1539ADC1" modified="2014-10-29" version="1">MNDDEKGKRFLELIDEQNNVQWSIVAKLSSLISSKWDSADLQKEIEELVEKHTTITKELNSLDENSSIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYM4</accession>
    <name>A0A087RYM4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative 2-isopropylmalate synthase protein</fullName>
            <ecNumber evidence="4">2.3.3.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01065</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18578">
        <property type="protein sequence ID" value="KFM18578"/>
        <property type="gene ID" value="AAA799P11_01065"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1027"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013709">
        <property type="entry name" value="2-isopropylmalate_synth_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036230">
        <property type="entry name" value="LeuA_allosteric_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08502">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00917">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110921">
        <property type="entry name" value="SSF110921"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="285" mass="30562" checksum="12B7E1B0357598FD" modified="2014-10-29" version="1" fragment="single">NGIGERAGNASLEELSMALKCLPYEQKYETNIKSELIYETSRYISKTVGIIVQPNKAIVGANAFGHESGIHTHGVLSNPLTYEPISPELVGRKRWLQVGKHAGVHGMNAMLAEYGVKPNEEQSKQILDKVKVIGDQGKQLTDVELLSIASEVMGDQDLKRIVQLTGFSVSTGIGTMPYAFVKLNVDGEDHVGTDYGVGPVDAALNAIQKVTGKLSEIRIKDYGLASISGGSGALCEVTVKVEDALGNKVSAKSVGEDIVTTSVKAVIDAVNRIMLKKLLQEKQIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ20</accession>
    <name>A0A087RZ20_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ig family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01014</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18724">
        <property type="protein sequence ID" value="KFM18724"/>
        <property type="gene ID" value="AAA799P11_01014"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.980"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015919">
        <property type="entry name" value="Cadherin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49313">
        <property type="entry name" value="SSF49313"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="467"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="222"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="228"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="501" mass="56283" checksum="8216B4C5922F307D" modified="2014-10-29" version="1">MNFVSTKLGIFAVFSLSLLMLTPAYANVTSFSLEKSFFTIDESFSFSGEQEDKEIVYVIIRDPNGNFQGMLSDPQPDQGEFSVIPRPVENFFDREGIYNATAFTDSQKEDEGVTIKIEYDGKKIFEIPDFVLELKPISDKEVDELKTVSFTVEITDSTVEGEVYSLEKNPPSGATIDSSTGKFTWTPSGSHGNNPGAEYTFDIVVTKGSQTDRDTITITVNEPDAVNPEPEPEEKTETKQTTSEPEELDIPAPFVDETKDPQSYVDRYNNEAGYKKWFDDNYPEYSSIYQAVGLEEPKVLAPFVDPNLDPQYYVDRYKNEITYKDWFDKTYPEMTIYEAVGLEEPEIVEPEFGECGEGTKLVDGKCTVIPSESKSSGGGCLIATAAYGSEMAPQVQFLREIRDNQLMNTESGTSFMTGFNQVYYSFSPYIADMQRENPMFKEMVKIGITPLLSSLSIMEYAESESQVLGYGIGVILINIGMYFAAPAMLFFGIKKLRRVRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ49</accession>
    <name>A0A087RZ49_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00957</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18753">
        <property type="protein sequence ID" value="KFM18753"/>
        <property type="gene ID" value="AAA799P11_00957"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.926"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="56" mass="6754" checksum="EE3385C382B3AC6B" modified="2014-10-29" version="1">MEMEFKEVYCMNCKKVLGRYNVKFYDDDKISELLKTTHSTHVRKGHQVNIKKFVKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ54</accession>
    <name>A0A087RZ54_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Acylphosphatase</fullName>
            <ecNumber evidence="1 2">3.6.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">acyP</name>
        <name evidence="5" type="ORF">AAA799P11_00967</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>an acyl phosphate + H2O = a carboxylate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29067"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="EC" id="3.6.1.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the acylphosphatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.7" evidence="1 2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18758">
        <property type="protein sequence ID" value="KFM18758"/>
        <property type="gene ID" value="AAA799P11_00967"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.931"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003998">
        <property type="term" value="F:acylphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020456">
        <property type="entry name" value="Acylphosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001792">
        <property type="entry name" value="Acylphosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036046">
        <property type="entry name" value="Acylphosphatase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017968">
        <property type="entry name" value="Acylphosphatase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47268">
        <property type="entry name" value="PTHR47268"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00708">
        <property type="entry name" value="Acylphosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54975">
        <property type="entry name" value="SSF54975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00150">
        <property type="entry name" value="ACYLPHOSPHATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00151">
        <property type="entry name" value="ACYLPHOSPHATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51160">
        <property type="entry name" value="ACYLPHOSPHATASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acylphosphatase-like" evidence="4">
        <location>
            <begin position="5"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="20"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="92" mass="10586" checksum="AC6C04AB061995ED" modified="2014-10-29" version="1">MSNQRIRIFVTGRVQGVFFRQTLKTKAIQNDVFGWVKNLKDGRVEAILEGNEENVSRLIEWAHAGPANAIVEDVEIRNEKFTGEFSKFDVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ57</accession>
    <name>A0A087RZ57_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative homocitrate synthase protein</fullName>
            <ecNumber evidence="2">2.3.3.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18761">
        <property type="protein sequence ID" value="KFM18761"/>
        <property type="gene ID" value="AAA799P11_00970"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="6"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="79" mass="8864" checksum="CA00C0FCE8AAA098" modified="2014-10-29" version="1">MSIVYVMITCDVGFEEPVINQLKTIEGIKEVIGVIGTYDIIIKLESSDLENLKNTIPSKIRKIQNIRTTLTLAVIESQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ60</accession>
    <name>A0A087RZ60_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative snRNP Sm-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00973</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18764">
        <property type="protein sequence ID" value="KFM18764"/>
        <property type="gene ID" value="AAA799P11_00973"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="LSM_dom_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sm" evidence="1">
        <location>
            <begin position="7"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="74" mass="8429" checksum="C984DC3541CAC958" modified="2014-10-29" version="1">MSDEITVELLKHINKSILVKLKNLKTINGILINFDPQMNLILDKVDDVTDKDKKIDLGKVVLRGEQHIDSFSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH2</accession>
    <name>A0A087RZH2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methionine synthase protein</fullName>
            <ecNumber evidence="2">2.1.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00907</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.13" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18876">
        <property type="protein sequence ID" value="KFM18876"/>
        <property type="gene ID" value="AAA799P11_00907"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.869"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008705">
        <property type="term" value="F:methionine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003759">
        <property type="entry name" value="Cbl-bd_cap"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036594">
        <property type="entry name" value="Meth_synthase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02607">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="B12-binding" evidence="1">
        <location>
            <begin position="162"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="280" mass="31497" checksum="9510E1A180BE58B6" modified="2014-10-29" version="1">MVYLRAKKVKSDQYLYLVKSVWDSKKSTSKQEIIKYLGKASEVVKDDIPIDYRNDPKVLSALSAYNPKDIKKREDATKKSKQQLYKKLTEGNIQDCVKIYEEYIKIFNASDFFDKILKPTMYKIGDDWATGKISIATEHVASNVAQTLVKIIMDQVSATGNKKTALICVPLGEEHHLGCDVLETYLSIKGFKIFNMGTSMPTESILSFIDNNKPDVVLVSITLEDNLGAGQRLVKKIKDHVDMPVLIGGYAFQAKKIPKFAGQIIPDCGLEEVPKILRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH6</accession>
    <name>A0A087RZH6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00911</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18880">
        <property type="protein sequence ID" value="KFM18880"/>
        <property type="gene ID" value="AAA799P11_00911"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.874"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="TF_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CYCLIN" evidence="4">
        <location>
            <begin position="146"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="CYCLIN" evidence="4">
        <location>
            <begin position="240"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="329" mass="36566" checksum="2F4F1D073DC14E5E" modified="2014-10-29" version="1">MEIQKLIHMSLAFHVKTVAFFCGEYEMITELVHQKTCKKNKIVTDLNTGEVACTNCGAVLSERVVDNGPESLGMSGEEYQANSRVGRKISLKMIDMGLSTIIESKDKDATGKGLSNENKRMFYRLRRWDRNSRSANSIKSFQKAFTMLDGISAKLGLPEPVIEQTAYLFRKIAAKKILAGRSTAGILCAAIYITCRMTNTPRTLQDVANAGNVNKKNIQRTYRFLARELNITPEIYHPTEFVTRIAKAVNISEKTERLAFRILDLSARNGVSESKNPMAMAATATYLASVKNDEKISQLKISKVSGISAVTIRDRTKEILKKVGGEING</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI1</accession>
    <name>A0A087RZI1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00916</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18885">
        <property type="protein sequence ID" value="KFM18885"/>
        <property type="gene ID" value="AAA799P11_00916"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.879"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="173" mass="19570" checksum="A6E710E26379A3B4" modified="2014-10-29" version="1">MEEEAKDIIVLGAIRRGDKKFDKIQRSTQIKPEELNSILEKLEERGLITVEEKKGWLGKKIELKVTEKGSNELDHRLHEVKEKWNQMQALYQSGDKKKLQGFMDDNRSFFPMMMFFGVMDIMMFSMMFSMIGASMGDYVPAESMPDGADGAMDDGSMDGGGMDDGGFDIDIGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZJ2</accession>
    <name>A0A087RZJ2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxononatrienedioate hydrolase protein</fullName>
            <ecNumber evidence="2">3.7.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mhpC</name>
        <name evidence="2" type="ORF">AAA799P11_00927</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.7.1.17" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18896">
        <property type="protein sequence ID" value="KFM18896"/>
        <property type="gene ID" value="AAA799P11_00927"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.890"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102296">
        <property type="term" value="F:4,5-9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="42"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="281" mass="31467" checksum="70B7601A3A0755D5" modified="2014-10-29" version="1">MIAKLTKTYLLMTIQAKTVNEKFLQVDGHKIRYLESGNFEKTLVLVHGLGASAERWEQVMPIFAEKFRVVIPDLIGFGYSDKPLADYTIDFFSDFLEKFLQTANIRSPYLIGSSLGGQISAEYTATHQNDVDKLILVSPSGVMKQSTPALDAYIMAALYPNEQNAKNAFELMEGSGESVDHRIVSSFIKRMQLPNAKLAFMSTILGLKNAEIITKKLPSILTQTMLIWGSDDPVIPIHHADDFVSSIKDCRFVRMDGCGHTPYVQAPREFSEKVLDFLGVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL5</accession>
    <name>A0A087RZL5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">30S ribosomal protein S13</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rps13</name>
        <name evidence="5" type="ORF">AAA799P11_00860</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18919">
        <property type="protein sequence ID" value="KFM18919"/>
        <property type="gene ID" value="AAA799P11_00860"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.826"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027437">
        <property type="entry name" value="30s_Rbsml_prot_S13_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001892">
        <property type="entry name" value="Ribosomal_S13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018269">
        <property type="entry name" value="Ribosomal_S13_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00416">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00646">
        <property type="entry name" value="RIBOSOMAL_S13_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50159">
        <property type="entry name" value="RIBOSOMAL_S13_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="119"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="169" mass="18193" checksum="2B9974D928CCF304" modified="2014-10-29" version="1">MGNDIPGERKMLVGLTQIKGIGYNFATAILDTLKIDSNSNIGHLTDENVQAIEKLISNPVESNFPTWFLNRRKDIETGNDLHLLTSDIPFTLRNDIERERITASWRGYRHLSGLKVRGQRTRTSGRKGGAVGVAKGGMAAPAKKSSSDAPAAAAAPAADAPAPAEEKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM8</accession>
    <name>A0A087RZM8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00873</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18932">
        <property type="protein sequence ID" value="KFM18932"/>
        <property type="gene ID" value="AAA799P11_00873"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.840"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="90" mass="9815" checksum="994EFF58DD5C51EC" modified="2014-10-29" version="1">MGKIKIRTGRGTGTIEVDDDPKKWSGDEFRKIQEARKKAAGNRMVHTGRGTGSRKLKDMPDPKARPSTEGMTRVTGRGTGSRKSKNKGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN1</accession>
    <name>A0A087RZN1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Plastocyanin protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00881</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18935">
        <property type="protein sequence ID" value="KFM18935"/>
        <property type="gene ID" value="AAA799P11_00881"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.843"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027560">
        <property type="entry name" value="PEFG-CTERM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04296">
        <property type="entry name" value="PEFG-CTERM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="246"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="274" mass="30024" checksum="2DE30C92F391958C" modified="2014-10-29" version="1">MKGVKLEILLLFGISLLVVSSFGTVYAQSSYTIKIPTGASDPNAPYFWQSEKDGSTTGTIEILRGDTVVWSNADTAPHTVTSGTPETGPDEMFDSGLFDPGEFFVLEFENVGSFPYFCIIHPWMVGEVKVTEGFSILPDVGKTVTDGDKSFDVEYKFSRLLSNPQINVDQKSITFELVGNSKSSNHDLVLKLSSELLDGPYVIWADGKKLSDFQHEKENGMNTLVIPLTEQSKTLTIVGTFVIPEFGTVAIMILSVAIISVIMFTAKSKLNLRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZP0</accession>
    <name>A0A087RZP0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Isopentenyl-diphosphate Delta-isomerase</fullName>
            <ecNumber evidence="3">5.3.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">idi</name>
        <name evidence="7" type="ORF">AAA799P11_00890</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from isopentenyl diphosphate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the IPP isomerase type 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.2" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18944">
        <property type="protein sequence ID" value="KFM18944"/>
        <property type="gene ID" value="AAA799P11_00890"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.852"/>
    <dbReference type="UniPathway" id="UPA00059">
        <property type="reaction ID" value="UER00104"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004452">
        <property type="term" value="F:isopentenyl-diphosphate delta-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050992">
        <property type="term" value="P:dimethylallyl diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00202">
        <property type="entry name" value="Idi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011876">
        <property type="entry name" value="IsopentenylPP_isomerase_typ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018427">
        <property type="entry name" value="Isopntndiph_ism"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02150">
        <property type="entry name" value="IPP_isom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="6">
        <location>
            <begin position="30"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="216" mass="24976" checksum="4CF22C2F8286A124" modified="2014-10-29" version="1">MAEEFVILVDENDNPIGKEEKVKCHLPNGKLHRAFTALLFDENGRLVLTRRAKEKMLWPGDWDGTFASHPRESETYVSSGERRMPEELGIEGKLDYLHKFEYHVPYKDVGSENEICGTLIGIIDESTELKEIEGEIDEIKWISSSELLSEIKTNPQIYCPWMLIALELLDKSDKTMLEKHANVLSTWMTSEIHEGLQNAIKKHLPQEKWRLVNEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR8</accession>
    <name>A0A087RZR8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00824</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18972">
        <property type="protein sequence ID" value="KFM18972"/>
        <property type="gene ID" value="AAA799P11_00824"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.788"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="13794" checksum="71EF575258962853" modified="2014-10-29" version="1">MLESYLLAISNIFLQLDYLNPFDDPSDIVTQDDIISGSVTVAIAGLSIFLTIMAVSAFRKTGVSQLKYIALAFSLFTIYLATEAIQELLPLDDDSFDLFLSVIMMFILISFFFGIMRKKKNNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT0</accession>
    <name>A0A087RZT0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">2-phospho-L-lactate transferase protein</fullName>
            <ecNumber evidence="3">2.7.8.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cofD</name>
        <name evidence="3" type="ORF">AAA799P11_00836</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.28" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18984">
        <property type="protein sequence ID" value="KFM18984"/>
        <property type="gene ID" value="AAA799P11_00836"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.803"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043743">
        <property type="term" value="F:LPPG:FO 2-phospho-L-lactate transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07186">
        <property type="entry name" value="CofD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10680">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01257">
        <property type="entry name" value="CofD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002882">
        <property type="entry name" value="CofD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038136">
        <property type="entry name" value="CofD-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010115">
        <property type="entry name" value="FbiA/CofD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43007">
        <property type="entry name" value="PTHR43007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01933">
        <property type="entry name" value="CofD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142338">
        <property type="entry name" value="SSF142338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01819">
        <property type="entry name" value="F420_cofD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="306" mass="33916" checksum="08115AC1F4CBEF9C" modified="2014-10-29" version="1">MITVLAGGTGSVKLVRGLVSQESKVNVVSNVGDNYWLYGLYVCPDIDTIVYGLADLLDSEKGWGIKKDTFNFLRQMEVFGEETWFRVGDRDAATHLIRTNMLKNGKNLSDITKWMCEKFAVSANIIPVTDNSIETRIITDKGELHLQEYWVKHRGKDPVEGIQYIGADKARPNPEAVNAIHDADLVILAPGNPLTSIGPMLQIKGIRKELSKIKKKVVAISPLIGDNAISGPAAKYMQAAGIESNAYGLAKMYSDVCSKMIIDTKDRMLSKKIQSLDMKVFETKITMKNKLAEDALANFILKQVHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT1</accession>
    <name>A0A087RZT1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00837</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18985">
        <property type="protein sequence ID" value="KFM18985"/>
        <property type="gene ID" value="AAA799P11_00837"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.804"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="315"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="347"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="347"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="458" mass="49365" checksum="931578C1C990ABE6" modified="2014-10-29" version="1">MSRTVVLTVLLAGLIIIGSSGSVFGAQMDARINPNTETSPFKMNYQKTVFIEYQNGGQLFDVLRGQEWTVQGTADSSDPGVQKLMSALNNKIQSDGSQAHISDLNVSYDIHLKARNIHTSVDYRVILEGTLSNYVITKDSQKTLIDLGWRGMSTTNEVVIDGHELNFPINILLEMEPEAAAFFVGTEAEDVLHRNLIDADFILQQPLTNWHFLFDPTGINVDAGTFGLSEEIAGYVVSSWTMGESSIREGRQVERVFEAEVMADQLYVVRSVQSSDQANLYAIGFGALDVFDGVEIAGVTATPPENYATTSTGDFPVMIIYGMAGIAAIAGGAFFMFSNRALKNTKEGQQGIDPNRLVGYQTSSSSGGYQTNRGEAQLADGSDYQQTRSYYDDSSNTTQSPPPQPEATPAAAEEAACGCAASAEMGSECDCAMQGACLCDASCPCNADICKEQVNSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L3</accession>
    <name>A0A087S0L3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cobyrinate a,c-diamide synthase</fullName>
            <ecNumber evidence="3">6.3.5.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Cobyrinic acid a,c-diamide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cobB</name>
        <name evidence="3" type="synonym">cbiA</name>
        <name evidence="6" type="ORF">AAA799P11_00785</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>2 ATP + cob(II)yrinate + 2 H2O + 2 L-glutamine = 2 ADP + cob(II)yrinate a,c diamide + 2 H(+) + 2 L-glutamate + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:26289"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58537"/>
            <dbReference type="ChEBI" id="CHEBI:58894"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; adenosylcobalamin biosynthesis; cob(II)yrinate a,c-diamide from sirohydrochlorin (anaerobic route): step 10/10.</text>
    </comment>
    <comment type="domain">
        <text evidence="3">Comprises of two domains. The C-terminal domain contains the binding site for glutamine and catalyzes the hydrolysis of this substrate to glutamate and ammonia. The N-terminal domain is anticipated to bind ATP and cobyrinate and catalyzes the ultimate synthesis of the diamide product. The ammonia produced via the glutaminase domain is probably translocated to the adjacent domain via a molecular tunnel, where it reacts with an activated intermediate.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="3">The a and c carboxylates of cobyrinate are activated for nucleophilic attack via formation of a phosphorylated intermediate by ATP. CbiA catalyzes first the amidation of the c-carboxylate, and then that of the a-carboxylate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CobB/CbiA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.11" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19267">
        <property type="protein sequence ID" value="KFM19267"/>
        <property type="gene ID" value="AAA799P11_00785"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.756"/>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00231"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042242">
        <property type="term" value="F:cobyrinic acid a,c-diamide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00027">
        <property type="entry name" value="CobB_CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004484">
        <property type="entry name" value="CbiA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011698">
        <property type="entry name" value="GATase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43873">
        <property type="entry name" value="PTHR43873"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07685">
        <property type="entry name" value="GATase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00379">
        <property type="entry name" value="cobB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="2 3" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="4">
        <location>
            <begin position="6"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="GATase_3" evidence="5">
        <location>
            <begin position="245"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="327"/>
        </location>
    </feature>
    <feature type="site" description="Increases nucleophilicity of active site Cys" evidence="3">
        <location>
            <position position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="450" mass="50036" checksum="D72C3F17554A0ED2" modified="2014-10-29" version="1">MKIPRIVLAGSSSGVGKTSITCSIIYALQKQGYSVQPFKIGPDYIDPSYLSSISKNEAFNLDVWLMGKNHLLSSFISNSKSNVSVIEGVMGFYDGFGGDSNYASTHHVASITKSPVLLILDASKTARSIAATALGFQKFHKNSRIAGIILNKIGSKKHENLCRQALQKTKLPIVGVIPKDPLLSLESRHLGLFTTLDEKTLYKKIQKVSKIISKNLDINQIIKILKNTTELQKVPKPSHKKPKTTIAVALDTSFNFYYQDNLESLRREGASLKFFSPVNDKKIPKCDGLYIGGGFPEILGSKLAKNQTMKKLIKNLAEDNLPIYAECGGLMYLTKSISSENKKYKMVGLFDAETSMTKRMKLNYTKGKISRTIISESPHSIQGHEFHYSKLNSVSSDSQFAYELEIGDGIKNQKDGLLQYNTLASYGHLYFDSSNYAENFVKNCTKYSRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L6</accession>
    <name>A0A087S0L6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Ribosome biogenesis protein Nop10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">nop10</name>
        <name evidence="8" type="ORF">AAA799P11_00788</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 7">Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the NOP10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19270">
        <property type="protein sequence ID" value="KFM19270"/>
        <property type="gene ID" value="AAA799P11_00788"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.759"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030515">
        <property type="term" value="F:snoRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00803">
        <property type="entry name" value="Nop10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007264">
        <property type="entry name" value="H/ACA_rnp_Nop10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036756">
        <property type="entry name" value="H/ACA_rnp_Nop10_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023532">
        <property type="entry name" value="Nop10_arc-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13305">
        <property type="entry name" value="PTHR13305"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04135">
        <property type="entry name" value="Nop10p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144210">
        <property type="entry name" value="SSF144210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="5 7" id="KW-0698">rRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="51" mass="6236" checksum="8D78F9401070D0D7" modified="2014-10-29" version="1">MRFQLRKCPKCFQYTLKDTCPKCKEQTISAHPAKFSPDDKYMRYRLAERYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M4</accession>
    <name>A0A087S0M4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GMP synthase glutamine-hydrolyzing protein</fullName>
            <ecNumber evidence="2">6.3.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00801</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19278">
        <property type="protein sequence ID" value="KFM19278"/>
        <property type="gene ID" value="AAA799P11_00801"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.768"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GATase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="180" mass="20286" checksum="1943324BBBF42815" modified="2014-10-29" version="1">MLLVVDNGSIYTKNLTDFLTEKNILFEIQTPNNLNINSLSKYDSFILSGRRKNEKKVNEINSKIVNYSIKNNSKLLGICYGAEILALTLGGTIKKSSSLQKGNETVRIFENGLIKDDSLLVFESHNFEISKLPPDLISIGESINCKYEIIKHVDKPIFGTQFHPEMSLDGNNLIEKFCIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M6</accession>
    <name>A0A087S0M6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DNA primase small subunit PriS</fullName>
            <ecNumber evidence="10">2.7.7.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">priA</name>
        <name evidence="10" type="synonym">priS</name>
        <name evidence="13" type="ORF">AAA799P11_00803</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.</text>
    </comment>
    <comment type="function">
        <text evidence="12">RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="10">Heterodimer of a small subunit (PriS) and a large subunit (PriL).</text>
    </comment>
    <comment type="similarity">
        <text evidence="10 11">Belongs to the eukaryotic-type primase small subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.-" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19280">
        <property type="protein sequence ID" value="KFM19280"/>
        <property type="gene ID" value="AAA799P11_00803"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.770"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003896">
        <property type="term" value="F:DNA primase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00700">
        <property type="entry name" value="DNA_primase_sml_arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002755">
        <property type="entry name" value="DNA_primase_S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014052">
        <property type="entry name" value="DNA_primase_ssu_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023639">
        <property type="entry name" value="DNA_primase_ssu_PriS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10536">
        <property type="entry name" value="PTHR10536"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01896">
        <property type="entry name" value="DNA_primase_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1 10 11" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="7 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 10" id="KW-0464">Manganese</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2 10 11" id="KW-0639">Primosome</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 10 11" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="10">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM19280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="373" mass="43099" checksum="8E1BBB324F047DE6" modified="2014-10-29" version="1">MKETDIKFLESAFKKYYFEQFDLIRVPERTSEREFGYQKFNSGMTRHISVKDDKELHLLLMQNVPSDVYCSNAYYSFPNLPMNEKDWKEADLIFDIDAKDLNLSCRSNHTLSICNECNEISNNYEKCSKCNSIKLEKKSMPCKNCIDSSKTEVLKLTEILTNDFSINKDDIQVYFSGNEGFHIYVYNSQFQQIGSRERSDLVDYIMFNGAIPEKFGMKKFKPNRNSFPNFDEPGWRGRFSRYVYGSKSKRSKIISELLSNGYSSFQKTLDDVSKNIGAKIDPNVTMDIHRIFRLPGSINSKSGLTKIHCTDLEKFDAYVDSSFLSDDTVEVLANCPIEFKLKNKKFGPYYNEKVSIPTFAAVYLVCKKLATIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S106</accession>
    <name>A0A087S106_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00734</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19410">
        <property type="protein sequence ID" value="KFM19410"/>
        <property type="gene ID" value="AAA799P11_00734"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.707"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="83" mass="9844" checksum="1F147E183C5807D7" modified="2014-10-29" version="1">MDMMLEEELIDLMTFCLQNPDSSEIPEKHKRISEIGRELYDDGGVDALENFFFVLKNRITEEIEKDPSPMRSLWNGLTDEWQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S120</accession>
    <name>A0A087S120_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Type I site-specific deoxyribonuclease</fullName>
            <ecNumber evidence="3">3.1.21.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">AAA799P11_00748</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Endonucleolytic cleavage of DNA to give random double-stranded fragments with terminal 5'-phosphates, ATP is simultaneously hydrolyzed.</text>
            <dbReference type="EC" id="3.1.21.3"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HsdR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.3" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19424">
        <property type="protein sequence ID" value="KFM19424"/>
        <property type="gene ID" value="AAA799P11_00748"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.721"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009035">
        <property type="term" value="F:type I site-specific deoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007409">
        <property type="entry name" value="Restrct_endonuc_type1_HsdR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004473">
        <property type="entry name" value="Restrct_endonuc_typeI_HsdR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040980">
        <property type="entry name" value="SWI2_SNF2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04313">
        <property type="entry name" value="HSDR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18766">
        <property type="entry name" value="SWI2_SNF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00348">
        <property type="entry name" value="hsdR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0680">Restriction system</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="11">
        <location>
            <begin position="303"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM19424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="998" mass="115524" checksum="3FB2B4C82CA74925" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S137</accession>
    <name>A0A087S137_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Secreted effector protein pipB2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pipB2</name>
        <name evidence="1" type="ORF">AAA799P11_00765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19441">
        <property type="protein sequence ID" value="KFM19441"/>
        <property type="gene ID" value="AAA799P11_00765"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.738"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13599">
        <property type="entry name" value="Pentapeptide_4"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="681" mass="74280" checksum="7062745683317308" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S198</accession>
    <name>A0A087S198_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00703</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19502">
        <property type="protein sequence ID" value="KFM19502"/>
        <property type="gene ID" value="AAA799P11_00703"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.673"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="40" mass="4616" checksum="0C5E6D7CAB03DECF" modified="2014-10-29" version="1">MEKKKDEKEAYATDDPTKTDAKSQEDLAREAIKKFKSLNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G3</accession>
    <name>A0A087S1G3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Binding-protein-dependent transport system inner membrane component protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00556</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19567">
        <property type="protein sequence ID" value="KFM19567"/>
        <property type="gene ID" value="AAA799P11_00556"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.540"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="61"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="121"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="163"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="186"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="219"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="57"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="252" mass="27036" checksum="33AEC6DD36457BB4" modified="2014-10-29" version="1">MAKNYTPHRIAFYIGIIVVWQITAMSGLWPDNVFPSPYEVAEDLAYGAADASLFYGIATSMWRLAVGLAIAIAGGVVLGIFMARVEFVNQTVGSLVLGLQSIPSIAWVPLAILWFGLTDGGIIFVTAIGAIFAVTINTYTGVKNINPHFIEAARNMGAKGSQLVTAVLIPAAFPYMISGFKQGWAFAWRGVIGAEILFSFLGLGFLLNAGRSLNDVSQVIGIMLVIMGIGLAVDGVVFKKLEDKVMSRWGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J4</accession>
    <name>A0A087S1J4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Proteasome subunit alpha protein</fullName>
            <ecNumber evidence="4">3.4.25.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">psmA</name>
        <name evidence="4" type="ORF">AAA799P11_00587</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase T1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19598">
        <property type="protein sequence ID" value="KFM19598"/>
        <property type="gene ID" value="AAA799P11_00587"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.571"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019773">
        <property type="term" value="C:proteasome core complex, alpha-subunit complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004175">
        <property type="term" value="F:endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000426">
        <property type="entry name" value="Proteasome_asu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10584">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00948">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 2 4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PROTEASOME_ALPHA_1" evidence="3">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="239" mass="25953" checksum="DC8BB37C4ECC1692" modified="2014-10-29" version="1">MASKGYDMTPTMYSPDGRIYQVEYAIETVKRGTLAIGVISKEGVIMAVEEKPRTLQSTDVTQKIFQVDYHIGVAAAGYIPDARVQVDNARFFSQGNRMTYDESVEVATVAKHLADQAHQFTQYGGVRPNGVSMIIAGVDQKGESIYVTDPSGTYVQFAAIAIGAGSDDVNAFLEKNYKDDLSLEDAAALAIAAINLKAEEKGGIKDIKMAKVSTESKIFEKVSEADLQKYSQNASKFVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L6</accession>
    <name>A0A087S1L6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pre-mRNA processing ribonucleoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00609</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19620">
        <property type="protein sequence ID" value="KFM19620"/>
        <property type="gene ID" value="AAA799P11_00609"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.596"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0543">Viral nucleoprotein</keyword>
    <keyword evidence="1" id="KW-0946">Virion</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="78" mass="9024" checksum="21D91B75F56A79E9" modified="2014-10-29" version="1">MYSVILTELGISVFDDEKLEKSFSFSNPVKEYLQVKNKESKLNELINYLASIQRGVSVSDDSLLVILKKNLRLWMIQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1T1</accession>
    <name>A0A087S1T1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Thiamine-monophosphate kinase</fullName>
            <shortName evidence="1">TMP kinase</shortName>
            <shortName evidence="1">Thiamine-phosphate kinase</shortName>
            <ecNumber evidence="1">2.7.4.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">thiL</name>
        <name evidence="3" type="ORF">AAA799P11_00684</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + thiamine phosphate = ADP + thiamine diphosphate</text>
            <dbReference type="Rhea" id="RHEA:15913"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; thiamine diphosphate biosynthesis; thiamine diphosphate from thiamine phosphate: step 1/1.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="1">Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the thiamine-monophosphate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.16" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19685">
        <property type="protein sequence ID" value="KFM19685"/>
        <property type="gene ID" value="AAA799P11_00684"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.664"/>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00142"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009030">
        <property type="term" value="F:thiamine-phosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02194">
        <property type="entry name" value="ThiL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02128">
        <property type="entry name" value="TMP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006283">
        <property type="entry name" value="ThiL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30270">
        <property type="entry name" value="PTHR30270"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005303">
        <property type="entry name" value="Thiam_monoph_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AIRS" evidence="2">
        <location>
            <begin position="38"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="42"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="117"/>
            <end position="118"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>5</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="283" mass="31107" checksum="4DA02271C8546B26" modified="2014-10-29" version="1">MSKLDESEIIKIFQRKLGCKNFVSEDVETFKSSKPNIIAKTDTLVESTDIPPKMKLADAARKSVIACVSDFAAKGVKPQYGIISVNFPSSISRSKVEEAASGFRKACKEFGISILGGDTNAGREVVFNVCLFGNADSIVPRSGAKNKDLIFATGPFGYTAAGLAILLHKKKGRRDFVKKAIQSAIHAKPRVGFGVKNKRYFSSAMDSSDGLSTTLNEMAKQSKKKFVITNSPHKKDVEEFAKSQKINQDKLVFHGGEEYEFVFTINPKYKATILKNAKSLRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W2</accession>
    <name>A0A087S1W2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00456</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19716">
        <property type="protein sequence ID" value="KFM19716"/>
        <property type="gene ID" value="AAA799P11_00456"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.436"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="124" mass="14599" checksum="5B34D989485932BD" modified="2014-10-29" version="1">MSIAGMYMLNVPQYTEEKIKQSLDMLYIDRKNEFRELSHVLLTEKALKAMPNWKEFVLNFSLDVEEAFKTWSGQNPLLSSSPQKALTILRQLGHDKTSMNQLVHLLNMSYNLSLEFKEIYRRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W3</accession>
    <name>A0A087S1W3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Blue copper domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00457</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19717">
        <property type="protein sequence ID" value="KFM19717"/>
        <property type="gene ID" value="AAA799P11_00457"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.437"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="419" mass="44968" checksum="A299D64A978D1430" modified="2014-10-29" version="1">MNKSLKYIALLAILPLFTVGITTGSFTDAEALKGKGVSSSKYGSSTNICGLQLCSEIPGGKEAWMAEQGKFKPVAPVSEPSEMMEKESTMEEITEADLGSVLRLSRANVPATIPMHQGYYDGGNVYYIITDSSDPTHADLITKNQGWKVELAPLLKNAPESALLKTYMFMNGIKGDGVHGFQGEVFTSTPAQPDVYSALTFHVHVTWNEGATPRVLTSDAMVMEAADNGEITLASVDVVLNMPQIVWPDGQMIVKEDKTLTDETPYGGGQVLDIDTEEMEVTFIAHRGWGPDGKTIYYIVTDATPSGPANMMGVVSSPTSASLIANSAAVDLFQFKNGLTGSGPLGFQAGIAAGAPGDENYSPMWRIFMTSWASPENAQLLETIGDLNAYREAGLIDIGIARPMDSDHIVNCPFVDPFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B2</accession>
    <name>A0A087S2B2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-glyceraldehyde 3-phosphate reductase protein</fullName>
            <ecNumber evidence="2">1.1.1.267</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gpr</name>
        <name evidence="2" type="ORF">AAA799P11_00400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.267" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19866">
        <property type="protein sequence ID" value="KFM19866"/>
        <property type="gene ID" value="AAA799P11_00400"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.385"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030604">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="15"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="332" mass="37536" checksum="1D6EB52E4B219D6D" modified="2014-10-29" version="1">MKYKKLGKSGIKVSEIGFGAWSIALDWWGKKVEEDEAKRMLKKAYDLGINYFETADMYGKGKSERLIGEVFKGMRDEVVISTKYGYDFSNVEQIGHAELPQDYSPEYTRKAVDACLERLQTDYLDSLGLHNPKLHHIRNDETFNTIDELMEEGKIKAAQVALGPAIGWTQEGLEAMDRKSISSVQTVYNILEQTPGNELIQKAEKEDVGILVRVPDASGILTGKVKADTVIPANDHRKDRKVEWRKSALEKVEQFRPIAERNGLNITEFAIKFILSKNKIASVLPTVVSEEEIEMFAAISDGKYLSSSDMKEIDDLYNTWPEYELKATPQAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B7</accession>
    <name>A0A087S2B7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19871">
        <property type="protein sequence ID" value="KFM19871"/>
        <property type="gene ID" value="AAA799P11_00405"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.390"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038664">
        <property type="entry name" value="Gar1/Naf1_Cbf5-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="82" mass="9273" checksum="2748E85E87B94359" modified="2014-10-29" version="1">MHLAGSGRVIIQLSNKLVEGQILCDEKGTRVAKVMELIGPVRRPFASATPLTNNIKRYIGKSVFATEYSPDNSKKKFRRRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D1</accession>
    <name>A0A087S2D1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">tRNA-specific 2-thiouridylase MnmA protein</fullName>
            <ecNumber evidence="2">2.8.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mnmA</name>
        <name evidence="2" type="ORF">AAA799P11_00424</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19885">
        <property type="protein sequence ID" value="KFM19885"/>
        <property type="gene ID" value="AAA799P11_00424"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.404"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01994">
        <property type="entry name" value="Alpha_ANH_like_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002761">
        <property type="entry name" value="Diphthami_syn_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030662">
        <property type="entry name" value="DPH6/MJ0570"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022427">
        <property type="entry name" value="MJ0570_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12196">
        <property type="entry name" value="PTHR12196"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01902">
        <property type="entry name" value="Diphthami_syn_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039123">
        <property type="entry name" value="Diphthamide_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03679">
        <property type="entry name" value="arCOG00187"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00290">
        <property type="entry name" value="MJ0570_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Diphthami_syn_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="229" mass="25937" checksum="94DCEA5ABF1FC23B" modified="2014-10-29" version="1">MKLASLFSGGKDSTYAIYLAQKQGHEIKCLLSIFTKSEESHLLHHPNIQWTKLQAESMKIPQITIDSKSDNTNDELSLLEHLLKTAKDEYGIEGLVHGGIKSNFQKEKFEKVCSKYGLTVVAPLWDLEPEQYMNDLLEANFIFVMITVSSDGLDDSWLGKVIGTTEIKILKELSDKFGFNLNFEGGEAETFVIDCPLFSNSIKINRAEKKWDGYRGRFEIVDAELNYNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N8</accession>
    <name>A0A087S2N8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00296</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19992">
        <property type="protein sequence ID" value="KFM19992"/>
        <property type="gene ID" value="AAA799P11_00296"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.289"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="124" mass="14720" checksum="A198332350CC8EC6" modified="2014-10-29" version="1">MVTYNEYLKSILLQILESYEHLKEIQDKPGDLEIIKKELLKINGFLKVIANKIEDSKIPHSDFKPLKSKFKNYLENYSFEQEIETMAPLYQDDTHRIKNMRLKILESLEDNKMMEDAKGLLEKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U4</accession>
    <name>A0A087S2U4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutamyl-tRNA(Gln) amidotransferase subunit A</fullName>
            <shortName evidence="5">Glu-ADT subunit A</shortName>
            <ecNumber evidence="5">6.3.5.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">gatA</name>
        <name evidence="7" type="ORF">AAA799P11_00358</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the amidase family. GatA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.7" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20048">
        <property type="protein sequence ID" value="KFM20048"/>
        <property type="gene ID" value="AAA799P11_00358"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.347"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030956">
        <property type="term" value="C:glutamyl-tRNA(Gln) amidotransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00120">
        <property type="entry name" value="GatA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000120">
        <property type="entry name" value="Amidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004412">
        <property type="entry name" value="GatA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11895">
        <property type="entry name" value="PTHR11895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00132">
        <property type="entry name" value="gatA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 5" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Amidase" evidence="6">
        <location>
            <begin position="27"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="5">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="5">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="5">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="481" mass="52163" checksum="E96A2771094633E9" modified="2014-10-29" version="1">MNLKISALEYVQEVKNGNISAEDFMARTIERIEKIDDKLHAFLHVNPEVIDHARTIDKKIKSGEKVGSCFGMPISVKDNICIKNARTSCASKILHDFIAPYDATVISRLKNEDAIFVGKVNLDEFAMGLTTEFSAYGPTHNPWNTDYVPGGSSGGSGASVSSFECVASLGSDTGGSTRNPASFCGVVGYKPTYGLISRFGLISYANSIEQIGPVTRTVKDTAFMLNIISGKDTHDDTTVDNSGQDYLSEIELGLEGKKIGIIKEMIGDGIDPLVLSATKNAISKFENLGAICEEVSLDMVKYSVAAYYTITATEAGSNLARYDNILYGYDFPVEGYEFNAYISKARTKFGPEVTRRMILGGFVPSAGHAGKYLLKALKVKEKLTEEINQLFQKYDYLVAPTVPILPFKIGEKIDDPVALFLVDINTVTANLTGRPAISVPFSMANGLPIGIQIMANSMEDKALLQAAFALESTVTLPEVPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U9</accession>
    <name>A0A087S2U9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase</fullName>
            <ecNumber evidence="3">6.3.4.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">purP</name>
        <name evidence="6" type="ORF">AAA799P11_00363</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + ATP + formate = 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + ADP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:24836"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58467"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; IMP biosynthesis via de novo pathway; 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide (formate route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.23" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20053">
        <property type="protein sequence ID" value="KFM20053"/>
        <property type="gene ID" value="AAA799P11_00363"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.352"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01163">
        <property type="entry name" value="IMP_biosynth_PurP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023656">
        <property type="entry name" value="IMP_biosynth_PurP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009720">
        <property type="entry name" value="IMP_biosynth_PurP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010672">
        <property type="entry name" value="IMP_biosynth_PurP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38147">
        <property type="entry name" value="PTHR38147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06849">
        <property type="entry name" value="DUF1246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06973">
        <property type="entry name" value="DUF1297"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004602">
        <property type="entry name" value="ATPgrasp_PurP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1246" evidence="4">
        <location>
            <begin position="4"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1297" evidence="5">
        <location>
            <begin position="156"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide</name>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide</name>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="238"/>
        </location>
        <ligand>
            <name>5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide</name>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF06973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="341" mass="38606" checksum="51C27D09FD7F4590" modified="2014-10-29" version="1">MTSIATLGSHCSLQVLKGAKDEGLKTILVCEKKRERLYRRFPFIDELIIVDKFREVLDEKCQATLEQNDAVLIPHGTLIAQMSSEEIESIKTPIFGNKWILRWESDREMKEKLMREANLPMPKPVTNPSEIEKLSIVKRQGAAGGKGYFMVANEEDYNTKRNQLISEGIISKDETLYIQEYAAGVLAYLTFFYSPLKEELEFYGVDQRHESDIEGLGRIPAEQQLKSNKVPSFNVIGNSPLVLRESLLDEVYTMGENFVEAAKRIVAPGMNGPFCIEGVYDENAKFTSFEFSARIVAGSNIYMDGSPYYSLLFNETMSMGKRIAREVKTATESNQLDKITT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X4</accession>
    <name>A0A087S2X4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20078">
        <property type="protein sequence ID" value="KFM20078"/>
        <property type="gene ID" value="AAA799P11_00149"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="53"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="397" mass="45287" checksum="FADB7D2C5D961302" modified="2014-10-29" version="1">MNAVSDSELRALIKNNYLKFLERIPSDGEIEYHFNQIKTKKISLNDLDSIFQNSQEYIDLKEHKNQNQDLSDEFEQIISNNYNFADISDSSSPEPKSILVTCFNEETKKGGVFFLESNSLKKLYDENACYGIFYDKTNSLLFCVARTMPQIVVFKKINNNFQKLKVSFSNYIFSEDAHGCCVLENKIYLVATEGEQNGQKAKGIVAPGKDHVGKIIVSKIICSNDEIIIKDSQIFNPFDCTHHHHINDLSILNDELYLSSHSYCDKNKNFIKKGAISKLNSSLQSTVLHSKTIHPHSVCFFNDRLYVCASGLASIFSIDISHNSTQLEYKGTNAYIRGLLVTKLYFYFGMSITKSRSESKFYNLESGVLQFNRKTGEVKRIKIPDIYDSIYAIISIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S306</accession>
    <name>A0A087S306_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">GDP-mannose 4,6-dehydratase</fullName>
            <ecNumber evidence="3 4">4.2.1.47</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">GDP-D-mannose dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">gmd</name>
        <name evidence="6" type="ORF">AAA799P11_00181</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>GDP-alpha-D-mannose = GDP-4-dehydro-alpha-D-rhamnose + H2O</text>
            <dbReference type="Rhea" id="RHEA:23820"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57527"/>
            <dbReference type="ChEBI" id="CHEBI:57964"/>
            <dbReference type="EC" id="4.2.1.47"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.47" evidence="3 4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20110">
        <property type="protein sequence ID" value="KFM20110"/>
        <property type="gene ID" value="AAA799P11_00181"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.180"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008446">
        <property type="term" value="F:GDP-mannose 4,6-dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070401">
        <property type="term" value="F:NADP+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019673">
        <property type="term" value="P:GDP-mannose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00955">
        <property type="entry name" value="GDP_Man_dehydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006368">
        <property type="entry name" value="GDP_Man_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43715">
        <property type="entry name" value="PTHR43715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="5">
        <location>
            <begin position="5"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="322" mass="36883" checksum="DAADA77FDB3E0941" modified="2014-10-29" version="1">MKKALILGVSGQDGSYLADFLLKKDYEVVGSYRRTSHRQLERLEDMNIFGKVKLVYADLIDQSSINQIIKNTQPDEIYNLAAQSFVGVSFVEPFLTTEVTGIGALRVLEAIREFSPNSKLYQASSSEMFGNSNEIKTENSRLQPASPYGAAKVFAHKTAQMYRESYDMFISCGILFNHESPYRGLEFVTRKITSEMAKIATKKADKIHLGNINAKRDWGYSGDYVKSMWMMLQQEKPSDYVVCTGESHSVKDFLEESFNYADLGDWQNYVEIDEKYFRPTDIDNLVGDASKARKELGWKPEMEFKKLVHLMVDHDMNLEKNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S311</accession>
    <name>A0A087S311_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC protein</fullName>
            <ecNumber evidence="4">3.1.3.45</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">kdsC</name>
        <name evidence="4" type="ORF">AAA799P11_00186</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the KdsC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.45" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20115">
        <property type="protein sequence ID" value="KFM20115"/>
        <property type="gene ID" value="AAA799P11_00186"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.185"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019143">
        <property type="term" value="F:3-deoxy-manno-octulosonate-8-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010023">
        <property type="entry name" value="KdsC_fam"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01138">
        <property type="entry name" value="C1.6.2:_Deoxy-d-mannose-octulo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01670">
        <property type="entry name" value="KdsC-phosphatas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="239" mass="27138" checksum="49A6CDC1614FD5AA" modified="2014-10-29" version="1">MNKTTVQISKDAKAKFDMIKAKFVAQGKSLSTDLQFFDYLADLQLELFSSITPDDMSSVENLIKNQINLKFLINEKAKNIKIILTDVDGVLSDGGRYYSKNGEIIKKFHTRDGMGVNVLLRNKIKTVIVTKETSPIVKKWAKDMNISHIYNGVIKKESILTKVCKTFKVMPSEIAYIGDDINDLELMKKVGFSGTPKNSDFSTKKIVDYICENNAGQTAFREFADIILYSKFPDKTKWY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S318</accession>
    <name>A0A087S318_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Motility-biofilm formation protein FlhH</fullName>
            <ecNumber evidence="2">2.1.1.144</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">flhH</name>
        <name evidence="2" type="ORF">AAA799P11_00193</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.144" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20122">
        <property type="protein sequence ID" value="KFM20122"/>
        <property type="gene ID" value="AAA799P11_00193"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.192"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007072">
        <property type="entry name" value="Rhamnosyl_O-MeTrfase_CmcI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04989">
        <property type="entry name" value="CmcI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="250" mass="29514" checksum="F1EF15084375E79B" modified="2014-10-29" version="1">MKDSSKIGGDKEFEQRNKKFVNMMNKNTSLLKKSKDWIDNVFDYEYVYHFRWLGRPIIQFPQDMIALQELIWKIKPDFIIESGIARGGSLIFHASILELLNHGKVIGIDIDIRKHNRIEIEKHPLFKRIKLIEGSSIDDSVIHKIKNIVKDKKKIMVLLDSHHTEQHVLEELEKYSPFVRSGSYVIVFDTIIEEMKKYHSKNRPWDRGNNPRTAVTKFLKKNKRFKIDKEIHKKLLITSCPNGYLKCIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S319</accession>
    <name>A0A087S319_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-glucose 4-epimerase protein</fullName>
            <ecNumber evidence="2">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00194</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20123">
        <property type="protein sequence ID" value="KFM20123"/>
        <property type="gene ID" value="AAA799P11_00194"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.193"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="335" mass="37856" checksum="D0A4FE21DD0FE4E3" modified="2014-10-29" version="1">MITGGAGYVGSVVIPQLIKDGHKVKCLDRFFFGKDYLSQDKFSKNLELIQDDIRWFDSNILDNVDVVLDLAAISNDPAGDLNPEKTFEINHLGRARVAKLSKEKGVKKYILASSASIYGQQETIANEESEVKPLTAYSKANRKAEMDNIPLNDENFSVTALRFSSVYGFSPRMRFDTAINCMVLDLFKNKKISVHGKSNKRPFVHIKDVVRSYQAVINAPTEKIQGQIFNIGSEDQNFEMGILAQEIVKHSGIDCEIELSDTNDHRSYFASFDKIKNAIGFTTQHSVSEGVKEIYDELVSGRLTDTVKTRTVEWYKKLLSDQELAKEYFINEKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S322</accession>
    <name>A0A087S322_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycoprotein 3-alpha-L-fucosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.214</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00197</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.214" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20126">
        <property type="protein sequence ID" value="KFM20126"/>
        <property type="gene ID" value="AAA799P11_00197"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018392">
        <property type="term" value="F:glycoprotein 3-alpha-L-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="7"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="332" mass="38239" checksum="38A075CCECEDC00F" modified="2014-10-29" version="1">MTVPKISIIIVNYNGKTLLEKCLESLYKVNYDNVEVILVDNNSTDGTMEFVTKNYPSIITIKLNSNKGFAEPNNIGSKIAKGEYLLFLNNDTVVTPDFVSELVKVMESDKKTAICQSLLLKPDGTIDSSGDFIDKLGVVYNSKTKSDEIRTISSARGASMLIRNSVFKKLDGFDEKFFVSFEDVDLGWRTWILGYRVKLVPKSIVYHHGGTTIEKIKSEIAFHGFKNQLSMKITNFEPILAVKNMLKFFIIYGTRELKIWFDYKIYGRTKLSSTKYENNIAPKPSFKIIFNSIWWVLKNQKYLIQKQRKINSERKVSTHELEKMNILCEKYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S331</accession>
    <name>A0A087S331_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Imidazole glycerol phosphate synthase subunit HisF</fullName>
            <ecNumber evidence="4">4.3.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">IGP synthase cyclase subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">IGP synthase subunit HisF</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">ImGP synthase subunit HisF</fullName>
            <shortName evidence="4">IGPS subunit HisF</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">hisF</name>
        <name evidence="6" type="ORF">AAA799P11_00206</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + L-glutamine = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate + H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24793"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="ChEBI" id="CHEBI:58525"/>
            <dbReference type="EC" id="4.3.2.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 4">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 5/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Heterodimer of HisH and HisF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 5">Belongs to the HisA/HisF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.10" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20135">
        <property type="protein sequence ID" value="KFM20135"/>
        <property type="gene ID" value="AAA799P11_00206"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.205"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000107">
        <property type="term" value="F:imidazoleglycerol-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04731">
        <property type="entry name" value="HisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01013">
        <property type="entry name" value="HisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006062">
        <property type="entry name" value="His_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004651">
        <property type="entry name" value="HisF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00977">
        <property type="entry name" value="His_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00735">
        <property type="entry name" value="hisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="3 4 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="4">
        <location>
            <position position="11"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="266" mass="28804" checksum="905C44D32E11F0AD" modified="2014-10-29" version="1">MLTKRIIPCLDVDNGRVVKGLNFESIKDAGDPVELAAKYSKDGADELVFLDITASQEKRKTIKELVSSVAKVIDIPFTVGGGVNSMDDARNILLSGADKVGVNTGAVKNPELLTELMALFGKQCVVIAIDAKRNYSEDSSKTMFEENGKKFWFEVFIYGGKQETGLDAIQWAKKATDLGAGEVLLTSIDKDGTKDGYDVLLTKKVVDAVSVPVIASGGCGKPEDMCEIFEKSNVDAALAASIFHYESQSVNQVKKILREKSISVRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S341</accession>
    <name>A0A087S341_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS</fullName>
            <shortName evidence="1">tRNA(Ile2)-agm2C synthetase</shortName>
            <ecNumber evidence="1">6.3.4.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">tRNA(Ile2) agmatidine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">tiaS</name>
        <name evidence="3" type="ORF">AAA799P11_00221</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>agmatine + ATP + cytidine(34) in tRNA(Ile2) + H2O = 2-agmatinylcytidine(34) in tRNA(Ile2) + AMP + 2 H(+) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:43608"/>
            <dbReference type="Rhea" id="RHEA-COMP:10625"/>
            <dbReference type="Rhea" id="RHEA-COMP:10626"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58145"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="ChEBI" id="CHEBI:83545"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.4.22"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TiaS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.22" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20145">
        <property type="protein sequence ID" value="KFM20145"/>
        <property type="gene ID" value="AAA799P11_00221"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.215"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002101">
        <property type="term" value="P:tRNA wobble cytosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01892">
        <property type="entry name" value="tRNA_Ile2_agm2C_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013696">
        <property type="entry name" value="DUF1743"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024913">
        <property type="entry name" value="tRNA_Ile2__agm2C_synt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08489">
        <property type="entry name" value="DUF1743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="DUF1743" evidence="2">
        <location>
            <begin position="143"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="442" mass="50075" checksum="24820543E5D18104" modified="2014-10-29" version="1">MQKKTILNIGFDDTDSPKGMCTTFLAYKIVDLLKKQKTEFLDFPRLIRFNPNIPWKTRGNGAVSIKIKTDNTAKIKNQIKNLVSKYSDTKNGANPGLVFFESDSIPSEFTEFSNLAMWQLINRNNAKKFAKKNNLEYFYKGNGQGLVGAIGAIGYDFHDHTLELLSYRKKQKFGKERKISITSVKEMQEKTYPDTFNSFDTKKGRVLITPHGPDPVFFGVRGENVDSLVYASKILKSEEKLDGYMIFKSNQGTGDHLKNELTFETMKPYASGKLIGTVSTSPKIGKGGHVFFKLISNNNEFWCAVYKPTGMSNVASNLIKGDKICVGGGVRKASKNFPRIINLEFIEIISLEKQTKISNPICKKCNKKMKSKGKGQGFQCIRCGKKSSRKMNEQIPRQVKQTLYLPKISAHRHLTRPQQRQGIQNKSSNFKNSLSWFCVYQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S355</accession>
    <name>A0A087S355_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transcription factor E</fullName>
            <shortName evidence="4">TFE</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">TFIIE subunit alpha homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Transcription initiation factor TFIIE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">tfe</name>
        <name evidence="6" type="ORF">AAA799P11_00235</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer. Interaction with RNA polymerase subunits RpoF and RpoE is necessary for Tfe stimulatory transcription activity. Able to interact with Tbp and RNA polymerase in the absence of DNA promoter. Interacts both with the preinitiation and elongation complexes.</text>
    </comment>
    <comment type="domain">
        <text evidence="4">The winged helix domain is involved in binding to DNA in the preinitiation complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TFE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20159">
        <property type="protein sequence ID" value="KFM20159"/>
        <property type="gene ID" value="AAA799P11_00235"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.229"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006367">
        <property type="term" value="P:transcription initiation from RNA polymerase II promoter"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01909">
        <property type="entry name" value="TFE_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016481">
        <property type="entry name" value="TF_E_archaea"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017919">
        <property type="entry name" value="TFIIE/TFIIEa_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002853">
        <property type="entry name" value="TFIIE_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024550">
        <property type="entry name" value="TFIIEa/SarR/Rpc3_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02002">
        <property type="entry name" value="TFIIE_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006373">
        <property type="entry name" value="TF_E_archaea"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00531">
        <property type="entry name" value="TFIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51344">
        <property type="entry name" value="HTH_TFE_IIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0804">Transcription</keyword>
    <keyword evidence="1 4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH TFE/IIEalpha-type" evidence="5">
        <location>
            <begin position="5"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="171" mass="20189" checksum="1FEFD3D8313EC7C8" modified="2014-10-29" version="1">MVDKYEDPFVRIASMIGGDEYLKVARSLLKAEDATDEEIASSTGLRINMVRKVLYDLFGKSLITGIRVKDERKGWFVYRWRTRREEVEHFIENQKKKIEERLQQRLDYENASDFYHCGNEDCPRVTFENALEGMFKCPSCGNVLNLKKNDKSKKAYQKKIDEIKKDMQQIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S379</accession>
    <name>A0A087S379_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Site-specific DNA-methyltransferase (adenine-specific)</fullName>
            <ecNumber evidence="2">2.1.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00259</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyadenosine in DNA + S-adenosyl-L-methionine = an N(6)-methyl-2'-deoxyadenosine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:15197"/>
            <dbReference type="Rhea" id="RHEA-COMP:12418"/>
            <dbReference type="Rhea" id="RHEA-COMP:12419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90615"/>
            <dbReference type="ChEBI" id="CHEBI:90616"/>
            <dbReference type="EC" id="2.1.1.72"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.72" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20183">
        <property type="protein sequence ID" value="KFM20183"/>
        <property type="gene ID" value="AAA799P11_00259"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.253"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009537">
        <property type="entry name" value="DUF1156"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012327">
        <property type="entry name" value="MeTrfase_D12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06634">
        <property type="entry name" value="DUF1156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02086">
        <property type="entry name" value="MethyltransfD12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DUF1156" evidence="6">
        <location>
            <begin position="10"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="884" mass="101334" checksum="15FEF5065905B964" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G7</accession>
    <name>A0A087S3G7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00018</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20271">
        <property type="protein sequence ID" value="KFM20271"/>
        <property type="gene ID" value="AAA799P11_00018"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.18"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="236"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="313"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="340" mass="39103" checksum="670B4709660D8C5D" modified="2014-10-29" version="1">MEFFLIKQIKIIVFFFTFSILLFSFVPSSYAHLEYSSSGGVMSGKYFSFIGFEPRNPIPKEPASIVFSIQDKDGNDIYDIETMVEIYNANMEKRLFYEPWIKRSIGDFEIPFVFEEKGTYQIVLSISEQNNPKEHVVVPRQMPSSSSNCDCVRVLFNVSVSENWSYIWNSLMVVVVVLPFAVFGYAMWNNYKNKNSKLEKYELVRYSIMFLAFAGGIIHLTIYIDHATTRIEYGMFLLLAAISQIGFGVLFLATLLSDSTQKEFRILRRRNAIIYLFGLIGSIVLLGLYLYAITFPPPFSPENHPEHIDIAGIAAKILEISLIGMIVYVMYQENKRNKSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H1</accession>
    <name>A0A087S3H1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Copper-containing nitrite reductase protein</fullName>
            <ecNumber evidence="4">1.7.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aniA</name>
        <name evidence="4" type="ORF">AAA799P11_00022</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20275">
        <property type="protein sequence ID" value="KFM20275"/>
        <property type="gene ID" value="AAA799P11_00022"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.22"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050421">
        <property type="term" value="F:nitrite reductase (NO-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="3">
        <location>
            <begin position="114"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="2">
        <location>
            <begin position="234"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="357" mass="40522" checksum="AE5011F244B7D8DC" modified="2014-10-29" version="1">MAMSLAIKSRSGFMMIFIVVAVTISSIFIIFPEGISAQKEEKAFVTHTGGVVNTSGEVLDPVYQVSEVEFDPEKYLREFNYGRVSQLESGQTVREFTIIADDDQVQEISPGVFYNVWTFNGTVPGPTIRATEGDLLRINFINNGDKPHTMHFHGEHPAEMDGVFEIVGANGGQFTYEFEAGPVGVHPYHCHVMPLEEHIAHGLYGVFIVDPKEGRPPADEMVMVLNGFDTDFDTENNFYAANSIPFYYQHHPIQIKKDELVRVYVVNMVEFDPINNLHLHGNLYQYYPTGTDIVPSEFTDMITLSQTERGIMEFKYQYPGKYLFHAHKVEFSEKGWVGIFLVQDDEQKNVEEVDYGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I1</accession>
    <name>A0A087S3I1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00032</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20285">
        <property type="protein sequence ID" value="KFM20285"/>
        <property type="gene ID" value="AAA799P11_00032"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.32"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="96" mass="11191" checksum="9BA47478A5517C67" modified="2014-10-29" version="1">MQKIEYEAPVWVLNYNNPKPLLDHAIHMLERHGVKREDMEITETPTAKIGAIVVEIWPYELVIGRVRSTRNDSFISGTEFTIELKLDEDGNYIDYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I3</accession>
    <name>A0A087S3I3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00034</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20287">
        <property type="protein sequence ID" value="KFM20287"/>
        <property type="gene ID" value="AAA799P11_00034"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.34"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021834">
        <property type="entry name" value="DUF3426"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11906">
        <property type="entry name" value="DUF3426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="242"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="278" mass="30797" checksum="ABAE213825982C4C" modified="2014-10-29" version="1">MENRASSIKNNQTHKNYFKEPNEKMIVEKIFIVGIIFASMTLPVFADVYIQNDQQYVGDDGSVHIVGEIVNNLDIPLNQINVEIDLFDENQQLIQTQKTNSLVNTIMPGMKGPFDLILTDNEAKNAKSYSLLLNYQVSPPKSQVIDITESSLTRDNHNNLMITGTVVNNGEITANTISVIATLYDKQGNVAAVSKVNPKPDYLGSEDSAFFLLSVPDKIQTEGIDEYTLIAESEEYAAVPEFPVGIVILLILTLSAYIGITRYSGRIITNLFSATNLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K0</accession>
    <name>A0A087S3K0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative tRNA pseudouridine synthase D protein</fullName>
            <ecNumber evidence="5">5.4.99.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">truD</name>
        <name evidence="5" type="ORF">AAA799P11_00051</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the pseudouridine synthase TruD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.27" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20304">
        <property type="protein sequence ID" value="KFM20304"/>
        <property type="gene ID" value="AAA799P11_00051"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.50"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106029">
        <property type="term" value="F:tRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2350.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001656">
        <property type="entry name" value="PsdUridine_synth_TruD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020119">
        <property type="entry name" value="PsdUridine_synth_TruD_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011760">
        <property type="entry name" value="PsdUridine_synth_TruD_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042214">
        <property type="entry name" value="TruD_catalytic"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13326">
        <property type="entry name" value="PTHR13326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01142">
        <property type="entry name" value="TruD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037016">
        <property type="entry name" value="Pseudouridin_synth_euk_prd"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00094">
        <property type="entry name" value="tRNA_TruD_broad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50984">
        <property type="entry name" value="TRUD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01268">
        <property type="entry name" value="UPF0024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TRUD" evidence="4">
        <location>
            <begin position="153"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="398" mass="45384" checksum="028AB9EF7466968E" modified="2014-10-29" version="1">MIPDLDSQIGISVYSTKFDGIGGKIRVTPEDFEVSEKILEKTQNSINQEEGYAVYKLKKKKIDTNHALSDIFRKKGIRLKSLGLKDASAITEQFVCSGNKGKAIEDYSTEKYSLKKIGFVKKPLSKKDMVGNHFKIKISGCSAGLSSFTEFENVLNFYGYQRFGSKRPVTHLIGKAILQRNFDSAVELILSFTSDYDSKENNEIRQKLADKQNYQQYFEKMPKQMDIERIVLKEMIEHGDSFRAVRAIPLSLRRFYVQAYQSFIFNKSLSTAFSDGENMFEAELGDICFDQKGIIGKFIKGLDQNLALPFVGYSYYKKTRFDYQISQILQQEEVTPKDFFIKEMQEVSSEGGFRQAAIDCSDYLSSDDVVEFTLSRGSFATILLREIMKPSDPIHAGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M0</accession>
    <name>A0A087S3M0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00071</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20324">
        <property type="protein sequence ID" value="KFM20324"/>
        <property type="gene ID" value="AAA799P11_00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="15362" checksum="E3F20445F0C1AB3B" modified="2014-10-29" version="1">MHKLSFVKTMEQFDLMISVMDDANKKNNFMFRELCVEVFRKSYSKLKSKNDLNVTANFLVGELFSAINNNKTRNKVTRAKSLRKLNAKKKVLTYSDLNKVCQFIKTSEFSLVVKLLKIQHNYGLNEAISAISD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M9</accession>
    <name>A0A087S3M9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Protoheme IX farnesyltransferase</fullName>
            <ecNumber evidence="11">2.5.1.141</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Heme B farnesyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Heme O synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ctaB1</name>
        <name evidence="11" type="synonym">ctaB</name>
        <name evidence="12" type="ORF">AAA799P11_00080</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>(2E,6E)-farnesyl diphosphate + H2O + heme b = diphosphate + Fe(II)-heme o</text>
            <dbReference type="Rhea" id="RHEA:28070"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="ChEBI" id="CHEBI:60530"/>
            <dbReference type="ChEBI" id="CHEBI:175763"/>
            <dbReference type="EC" id="2.5.1.141"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 11">Porphyrin-containing compound metabolism; heme O biosynthesis; heme O from protoheme: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 11">Cell membrane</location>
            <topology evidence="3 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="11">Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">In the C-terminal section; belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.141" evidence="11"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20333">
        <property type="protein sequence ID" value="KFM20333"/>
        <property type="gene ID" value="AAA799P11_00080"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.77"/>
    <dbReference type="UniPathway" id="UPA00834">
        <property type="reaction ID" value="UER00712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008495">
        <property type="term" value="F:protoheme IX farnesyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048034">
        <property type="term" value="P:heme O biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13957">
        <property type="entry name" value="PT_UbiA_Cox10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00154">
        <property type="entry name" value="CyoE_CtaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006369">
        <property type="entry name" value="Protohaem_IX_farnesylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030470">
        <property type="entry name" value="UbiA_prenylTrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43448">
        <property type="entry name" value="PTHR43448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01473">
        <property type="entry name" value="cyoE_ctaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00943">
        <property type="entry name" value="UBIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 11" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="215"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="239"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM20333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="297" mass="32364" checksum="76B82FD440831468" modified="2014-10-29" version="1">MRLGFNEIMEISKPRIVVLLVITAVTSMYAASKIVPGAPELDYWSYLHIIIAGALASAGSSALNHYYDKDIDPKMERTSKRPIPSGRMAASHVLIYGLVVSCISVIYGFFALNAVSAFFIAVGIFSYVIIYTAWLKRLNTSNIVIGGIAGSAASWAGWSAATGSMDLLGFLVGFLVFVWTPSHFWCLAMKIKDEYAQAEVPMLPVVIGMQKTSKYILGNTIILLPYSLVLSFIPDGMGVVYTVIAAVSGGLMLAYHYKLTKTPTSEFAWKAYKVTAPYLTIIFVAVALDAAFHIPLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N1</accession>
    <name>A0A087S3N1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">CysO-cysteine peptidase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mec</name>
        <name evidence="7" type="ORF">AAA799P11_00082</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20335">
        <property type="protein sequence ID" value="KFM20335"/>
        <property type="gene ID" value="AAA799P11_00082"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.79"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070122">
        <property type="term" value="F:isopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140492">
        <property type="term" value="F:metal-dependent deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028090">
        <property type="entry name" value="JAB_dom_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000555">
        <property type="entry name" value="JAMM/MPN+_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14464">
        <property type="entry name" value="Prok-JAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00232">
        <property type="entry name" value="JAB_MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50249">
        <property type="entry name" value="MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MPN" evidence="6">
        <location>
            <begin position="3"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="14869" checksum="3AE9A60447A03B18" modified="2014-10-29" version="1">MQKIILSNSDKKILTEHAENEKPNESCAILFGKENVISEVFLTKNIDESPVNFTISNEQLIEGYKIAEEKKVDVIGIFHSHPNSEAYPSNTDKKFMQSNPVAWVIYSGVSKKFRAYMLESEIKEISIEER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N6</accession>
    <name>A0A087S3N6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PAC2 domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00087</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20340">
        <property type="protein sequence ID" value="KFM20340"/>
        <property type="gene ID" value="AAA799P11_00087"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.84"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10900">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019151">
        <property type="entry name" value="Proteasome_assmbl_chaperone_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038389">
        <property type="entry name" value="PSMG2_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09754">
        <property type="entry name" value="PAC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="191"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="238" mass="27022" checksum="33B2D1036DAB098A" modified="2014-10-29" version="1">MIKPNTQENTLLVGFPSNGLVGTFTISYLIHSLKMRQVGEIEIPDLPSTLFVENGNILAPIRVYNKKNIFVIISDIPFNQYLAESFAHALHEFCKKNSIKKTIIVSGMETVNQEKNKPKIFGLVTHSILENTLYKNEIPKFLDGSIFGTDAAIISVFRKTKIPALVLYAECHPFFPDPEASIVAIETLASILDVKVDIQDIKNKIDKLRIQHRNLMEETIRTLQQQQEKQGKTPQIYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P3</accession>
    <name>A0A087S3P3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Iron-sulfur cluster carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mrp</name>
        <name evidence="6" type="ORF">AAA799P11_00094</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20347">
        <property type="protein sequence ID" value="KFM20347"/>
        <property type="gene ID" value="AAA799P11_00094"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.91"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140663">
        <property type="term" value="F:ATP-dependent FeS chaperone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02040">
        <property type="entry name" value="Mrp_NBP35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019591">
        <property type="entry name" value="Mrp/NBP35_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000808">
        <property type="entry name" value="Mrp_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044304">
        <property type="entry name" value="NUBPL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033756">
        <property type="entry name" value="YlxH/NBP35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961">
        <property type="entry name" value="PTHR42961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10609">
        <property type="entry name" value="ParA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01215">
        <property type="entry name" value="MRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="5">
        <location>
            <begin position="5"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="351"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="105"/>
            <end position="112"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="370" mass="39462" checksum="D425C45FB61CDA7B" modified="2014-10-29" version="1">MVGIDQVLEKLSTVIDPDLKKDIVSMGMIKDLELNDGNLKFTLELTTPACPFNVEIEDDVRKAIGELTELKNFDMNVTAKVMEGRSLDADTGMASVKNIIGVASGKGGVGKSTVSLNLALALQQTGAKVGLLDADIYGPSIPLMLGMKDGFMEVEDNKLQPAESNGLKVVSFGFFAEQAHQAAIYRGPIISGILKQFLVDTNWSDLDYLIVDLPPGTGDIPLTLAQTIPITGILVVTTPQDVASNVAVKAIGMFEKLNVPIIGVVENMSHFICPNCDERHYIFGDGGAKKISEQFNMPFLGEIPLNSGIMSGSDVGKPIMITKPDSPSADAFRIAAKNIAAQCSILAAKLQEEMESEGSNEESAPEASTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R7</accession>
    <name>A0A087S3R7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00118</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20371">
        <property type="protein sequence ID" value="KFM20371"/>
        <property type="gene ID" value="AAA799P11_00118"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.116"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="290" mass="31365" checksum="5E9C2F52E1E9F945" modified="2014-10-29" version="1">MYAETISVDVDGTSYDVDYAVSGMSVSGIESDPDFISLILSVDVTDSPGVLDITFDRTFFDSIYEGADDDFIILADGDEPNFSETKTTSQSRTLSIELPSGTEEVEIIGSVFGRTIEETPSEPEETPEEPSQKQIPAAFVDPSKDPKVYVERYVTESSYKAWFEENYSDYTFHEALDISKSELDKLIAEIEKENSEPAPVETPEEPTKTTECGPGTILKDGACVLDERCGPGTVLQGDVCVVLEPQTSAPTTSFKGLGKDLGYGVIAAFIVTGAIAIILALMSKASKHSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T1</accession>
    <name>A0A087S3T1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Small-conductance mechanosensitive channel protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mscS</name>
        <name evidence="2" type="ORF">AAA799P11_00132</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20385">
        <property type="protein sequence ID" value="KFM20385"/>
        <property type="gene ID" value="AAA799P11_00132"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.131"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="169" mass="18921" checksum="DBDC6BCA026413EF" modified="2014-10-29" version="1">MPEIIIAVLSLIITGVLYFVTRQIINQKLQDLQGSDKLLGLILIFITLGEIFYLGIHFGLFDIAFELITSIGAVAVVIGIALQNQLKNAVSGISIFLNTQINVGDTIEFDYVKCKITRLHLTKITAISDEGIRVIIPNHKLSEEMVQIFPKKPNTIKEKNKKLENFNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3U1</accession>
    <name>A0A087S3U1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00142</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20395">
        <property type="protein sequence ID" value="KFM20395"/>
        <property type="gene ID" value="AAA799P11_00142"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.142"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="16"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="157" mass="17756" checksum="F1FE05A8AD881853" modified="2014-10-29" version="1">MKSNYYCNMTQFMTDFKHVLVPFDGSENGIDSIEAASKIAGNLGGKITILKCVEKKMPKFLFFKTKQDKLDAAIEVNAAENEASKFRKIAKKYGVNVTTEIKKIDDDPHQHIIDYVNRNDVDLVVMSPSKDINTTEIHESIVDKISKNINCSLLRLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3U3</accession>
    <name>A0A087S3U3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00144</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20397">
        <property type="protein sequence ID" value="KFM20397"/>
        <property type="gene ID" value="AAA799P11_00144"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="3"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="144" mass="16628" checksum="FE285124786936B2" modified="2014-10-29" version="1">MKIKKILIPYDATPSSKRAVKKIFPLIEKHGSKIIFLSCIHDKATFGFFKTKSDKKEIERERKTIQKYHEQLKKEADSFDIPSSSKIIKSNLESHSIIEYAKEQKVDLIVMSKSKLGTHAEKMYYNSTVDAVFKKAPCPFLYIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPI8</accession>
    <name>A0A087RPI8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Oligopeptide/dipeptide transporter protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01508</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000090">
        <property type="protein sequence ID" value="KFM15392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15392">
        <property type="protein sequence ID" value="KFM15392"/>
        <property type="gene ID" value="AAA799P11_01508"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="18"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="oligo_HPY" evidence="5">
        <location>
            <begin position="127"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM15392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="23582" checksum="773E3A1D19D0AE02" modified="2014-10-29" version="1" fragment="single">GDIVSEPLEVHNIGDKNGRRKRVIEVLHEVKLEPAEEIMKKYPHMLSGGQRQRVVLARALSINPKVILADEPVSMLDVSIRAEMLELMHELQRKYDISFIYITHDLATARXXXXXXXXXXXXXXXXVLLNPKHPYTQALIDAISEPNPDNLHKEKVIRINEPSEIDILQGCRFRNRCPYIIDKCESEPDLEKVGDEHFSACHVKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPU5</accession>
    <name>A0A087RPU5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01501</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000086">
        <property type="protein sequence ID" value="KFM15499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15499">
        <property type="protein sequence ID" value="KFM15499"/>
        <property type="gene ID" value="AAA799P11_01501"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="79" mass="9230" checksum="278EBFBE27F0ABC9" modified="2014-10-29" version="1" fragment="single">MMLNYDAPLYRPPSEAKSLIFQVTLGCSFNECSFCDMYRSKEYSERPWDEVKSEIDMMAEYLPDTRRVFLADGDALNLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQ46</accession>
    <name>A0A087RQ46_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative thiosulfate sulfurtransferase 2 protein</fullName>
            <ecNumber evidence="2">2.8.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cysA2</name>
        <name evidence="2" type="ORF">AAA799P11_01494</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000082">
        <property type="protein sequence ID" value="KFM15600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15600">
        <property type="protein sequence ID" value="KFM15600"/>
        <property type="gene ID" value="AAA799P11_01494"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004792">
        <property type="term" value="F:thiosulfate sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="13"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="100"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="172" mass="19409" checksum="C1FEA57F762CDC8C" modified="2014-10-29" version="1" fragment="single">SKQGIENFNNQSKSLLSFLGVTPEKKVVFYDSVSGMLAARGVWMLMYFSHQNTMMLDGGITKWQKENLAIETKPNGFKPSNFSGKTNPEIISGFEYIRDNLENLKILDARSPGEYDGSTVRAAQSGHIPNAINIDWSQNLKEDGTFKSDEELSKMYNFPKDTXXXXXXXXRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQR1</accession>
    <name>A0A087RQR1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dolichol-phosphate mannosyltransferase protein</fullName>
            <ecNumber evidence="2">2.4.1.83</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01471</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.83" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000071">
        <property type="protein sequence ID" value="KFM15815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15815">
        <property type="protein sequence ID" value="KFM15815"/>
        <property type="gene ID" value="AAA799P11_01471"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004582">
        <property type="term" value="F:dolichyl-phosphate beta-D-mannosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="15"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="86" mass="9752" checksum="59E816105CDCCE1F" modified="2014-10-29" version="1">MAMLDSKTNHKTQVSIIIPTYNESQNIVSILKSIGDNLPKNIFAQAIVVDDNSPDGTGKIVEEYLENFKRMADYTIEIIHRRNSSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQT8</accession>
    <name>A0A087RQT8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crossover junction endonuclease MUS81 protein</fullName>
            <ecNumber evidence="2">3.1.22.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01468</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.22.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000069">
        <property type="protein sequence ID" value="KFM15842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15842">
        <property type="protein sequence ID" value="KFM15842"/>
        <property type="gene ID" value="AAA799P11_01468"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006259">
        <property type="term" value="P:DNA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006166">
        <property type="entry name" value="ERCC4_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02732">
        <property type="entry name" value="ERCC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00891">
        <property type="entry name" value="ERCC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ERCC4" evidence="1">
        <location>
            <begin position="7"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="90" mass="10314" checksum="9B6008B437D14CFA" modified="2014-10-29" version="1" fragment="single">MKLENLRIIVDEREKKSGIPELLKSVGLNLEMKTLPIGDYIVAPETVVERKSIRDLMASVFDGRLFDQCTRLKEHFENPVVLMEGNVDEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RR22</accession>
    <name>A0A087RR22_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01456</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000064">
        <property type="protein sequence ID" value="KFM15926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15926">
        <property type="protein sequence ID" value="KFM15926"/>
        <property type="gene ID" value="AAA799P11_01456"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="62" mass="6853" checksum="591A9C118F1D9A7D" modified="2014-10-29" version="1" fragment="single">MQYFQAVQQGKQRAGKSQMKMFEAAGFGMLTLTTKKVDGKFQPVGEEDFTAVVNSEEGYVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS56</accession>
    <name>A0A087RS56_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase-reductase SDR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01444</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000057">
        <property type="protein sequence ID" value="KFM16310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16310">
        <property type="protein sequence ID" value="KFM16310"/>
        <property type="gene ID" value="AAA799P11_01444"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4499" checksum="3C67E151F4D30358" modified="2014-10-29" version="1" fragment="single">LEIIVPSVVRSAVWLKHTFPYFINPILGKSFKKQLDSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS57</accession>
    <name>A0A087RS57_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000057">
        <property type="protein sequence ID" value="KFM16311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16311">
        <property type="protein sequence ID" value="KFM16311"/>
        <property type="gene ID" value="AAA799P11_01445"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1363"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="15691" checksum="AECE921F7657648F" modified="2014-10-29" version="1">MVKKKKEDEIPEWVTDEIQNAKFKKPEELKKSGYILEFYYEDNKIDVQLYDAVEDSRHIVTMDVPKSIKMDDLLKGEVYEFVFDQHKAPLSKKVSEYLEKEKEIEMNAIYQFELKSLELLDVGSSEAEDDAEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS80</accession>
    <name>A0A087RS80_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cysteine synthase protein</fullName>
            <ecNumber evidence="2">2.5.1.47</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cysM</name>
        <name evidence="2" type="ORF">AAA799P11_01442</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.47" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000055">
        <property type="protein sequence ID" value="KFM16334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16334">
        <property type="protein sequence ID" value="KFM16334"/>
        <property type="gene ID" value="AAA799P11_01442"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1362"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004124">
        <property type="term" value="F:cysteine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PALP" evidence="1">
        <location>
            <begin position="2"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="294" mass="32292" checksum="0DE5A194BB26ED00" modified="2014-10-29" version="1" fragment="single">GHNPFGSVKDRAAYWMIKDGEEKGILTKGKSIIIEPTSGNTGIALTGIANLLGYKVEIVIPEKASNETKDIIRNLGAKVFETSDDLCPKVGAGTDQSIALATSIASSRPDTYYSPNQYANEANFKGHYIGTGPEIWRQTECKVTHFFTGVGTGGTITGIGAFLKEKNPNVKIIGCQPQQNHLIQGWRNFEESAKPDLFLKRENVVDDWVSVDNEEAFSVVKDVFEKDQLLISPSSAAVYACMKKYPIEGDACVVGIFADDGRKFKSVYAKQNVMSEDEFENCLKDAKHMSELAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSC1</accession>
    <name>A0A087RSC1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01438</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000053">
        <property type="protein sequence ID" value="KFM16375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16375">
        <property type="protein sequence ID" value="KFM16375"/>
        <property type="gene ID" value="AAA799P11_01438"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="95" mass="10464" checksum="D05A2F603F6F8AE5" modified="2014-10-29" version="1">MTDIIWGNGANVLSNDIFVLNVTHRKNGNKEDYSDTEKIKISKADIPGLPHARADWSEDTLKSCIKDAFLKCEIEQREDSGILSAKVSHSGVGGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTD6</accession>
    <name>A0A087RTD6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GAF sensor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01414</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000044">
        <property type="protein sequence ID" value="KFM16740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16740">
        <property type="protein sequence ID" value="KFM16740"/>
        <property type="gene ID" value="AAA799P11_01414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="50" mass="5903" checksum="5D68A11B4652D33B" modified="2014-10-29" version="1" fragment="single">MNYHITDRGVRHRLQRLEKNNTVVGYSVTLSPELISEKVNRTIVLKFKFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUJ4</accession>
    <name>A0A087RUJ4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Succinyl-CoA ligase ADP-forming subunit alpha protein</fullName>
            <ecNumber evidence="4">6.2.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01369</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.5" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17148">
        <property type="protein sequence ID" value="KFM17148"/>
        <property type="gene ID" value="AAA799P11_01369"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1304"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043758">
        <property type="term" value="F:acetate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017440">
        <property type="entry name" value="Cit_synth/succinyl-CoA_lig_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005810">
        <property type="entry name" value="CoA_lig_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005811">
        <property type="entry name" value="CoA_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02629">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00549">
        <property type="entry name" value="Ligase_CoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001553">
        <property type="entry name" value="SucCS_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00399">
        <property type="entry name" value="SUCCINYL_COA_LIG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CoA_binding" evidence="3">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="2">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR001553-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="267" mass="27979" checksum="55A70D80746141F3" modified="2014-10-29" version="1">MIAYGTNVVAGVTPGKGGQKFEDKVPIYNTMKEAVDATNAKISIVFVPAKFFLSAAKDALEAGIKLLVAIPEHVPIRDTMEALELAKQKGAVIIGPNTPGIMIPELIKIGIMPPTPFKAGKIAVLSKSGTLLYEISDALTNAGFGQSITIGIGGDPVNGTRLIDAFDMVKDIPDLEGMVVVGEIGGDSEEMLAQRIIDSGFSKPTVAYIAGRAAPKEKRMGHAGAIVMGTYGSAESKVSMFNKANIPVAKRPAEVPVLLAGKMEKSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUU2</accession>
    <name>A0A087RUU2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lon protease protein</fullName>
            <ecNumber evidence="2">3.4.21.53</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lon</name>
        <name evidence="2" type="ORF">AAA799P11_01364</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.53" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17246">
        <property type="protein sequence ID" value="KFM17246"/>
        <property type="gene ID" value="AAA799P11_01364"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1299"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="1">
        <location>
            <begin position="7"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="236" mass="26923" checksum="E0B8E77383E29D2E" modified="2014-10-29" version="1">MAETKIIPIFPLDLVLFPRQELPLRIFEPRYKQLVDDCMLGDGQFGVCLIDETNSVNGWNSPKTVGTIAKITKCSDVEMDGLQLHIETLGRNSFKIKKIIPPSIPQPENYDPLSVEGHQQISEMHEKIGTEAKMYIQAEVEMIPEIDENISLEQWEKLVELWKKKIIQQALPQVVEPHSLDHVLEQYYLTTDTPTIDYIYSLSALGAKDPNDLQPILEATTMPELLQKVEELLTIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVI5</accession>
    <name>A0A087RVI5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01321</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17489">
        <property type="protein sequence ID" value="KFM17489"/>
        <property type="gene ID" value="AAA799P11_01321"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1261"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="61"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="156" mass="17854" checksum="8A3B1EA7B426A39F" modified="2014-10-29" version="1">MFDKFKKEEGGEMVEERPEENTAEEAPEPTVSETSSQIGIGELMGKRAQLEEAIDYVGLMIKNLKDKRTLLEKDIEEESVDIKNLKEKLQKVNEYIEEENRGISELAEKRKQVEAEADEVGTIINNLREKLTGVDRIIDDEGSRVRKIKESRESAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT9</accession>
    <name>A0A087RWT9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Nodulation protein J</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nodJ</name>
        <name evidence="8" type="ORF">AAA799P11_01296</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17943">
        <property type="protein sequence ID" value="KFM17943"/>
        <property type="gene ID" value="AAA799P11_01296"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1236"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006648">
        <property type="entry name" value="DrrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00164">
        <property type="entry name" value="ABC2TRNSPORT"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="55"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="101"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="134"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="172"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="7">
        <location>
            <begin position="3"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM17943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="27960" checksum="B55F32E17EFFC69C" modified="2014-10-29" version="1">MHQIIRLVNRNITISLNPGFLIWQVIFPLIYIFVAGFAYAPLIQHVPFGAKELDYPAFLASGMIGFNIMNSTLVSGIIIWNDRRHGMFEQIMSGPFTRSHYILSNICTIGIIGLVSASLIALVGYPVFFESVEFSIVTIPVIVFGAITGSVLFGSLASIISTRLRSSEGFNVIINTVFLFFAFVSSAFYPAENVPEPLRTAFYLNPLTYLVDVIRAGIFGNITEFVIIEMLVLVGIASVLFIIASKLLTKLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWU0</accession>
    <name>A0A087RWU0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nod factor export ATP-binding protein I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nodI</name>
        <name evidence="5" type="ORF">AAA799P11_01297</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17944">
        <property type="protein sequence ID" value="KFM17944"/>
        <property type="gene ID" value="AAA799P11_01297"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1237"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM17944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="312" mass="35183" checksum="17C1C480CFF3E34C" modified="2014-10-29" version="1">MSCIEVNHLSKSYGSIKAVDDIVLSVKPGQVFGFLGPNGAGKSTTIKLLTTLIPPSNGSLTILGIDAIKNPLDIRHKIGVVLQQPSYEPTLSVEKSLNKYGMMWNVTKTERKKRMEQLLKDFDLVEIRKKRNEDLSIGQRRRVQVAREFMHDMDLLFLDEPTVGLDPTARRKLLDYLKNKVKTGLTIFYTTHILTEAEYLCDEIAIIDKGKIITVDSPEALKSKFGKEKTIKIHLLEKNSKISELLNGIDDCKINFDSGTNIVIHSEQSELVLLKVLKILNDNDVEIEDLSAVPTNLEEIFLKMVRDNASDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWX9</accession>
    <name>A0A087RWX9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01248</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17983">
        <property type="protein sequence ID" value="KFM17983"/>
        <property type="gene ID" value="AAA799P11_01248"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="80" mass="8640" checksum="BE38D96DEAA280B4" modified="2014-10-29" version="1">MIVIAIVCTATILSGYVFWYVSPAEVAESVTIIANTQEGCIVETEDGFPINIGPCAAKEGEKIIAMIDTKYKEREAAMNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX05</accession>
    <name>A0A087RX05_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01241</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18009">
        <property type="protein sequence ID" value="KFM18009"/>
        <property type="gene ID" value="AAA799P11_01241"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1197"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="99" mass="11005" checksum="7CB6EFC00482A8A7" modified="2014-10-29" version="1">MAEIDTQKDVYLFLHGKMDLREKATNALTAKGFAAEKITMASPNKVGNVGDYMAMLWRPPTPDQIKIQQITKVEEVEPEGMIGLWKGVSQEDIESIPLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX06</accession>
    <name>A0A087RX06_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">V-type ATP synthase subunit F protein</fullName>
            <ecNumber evidence="4">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">atpF</name>
        <name evidence="4" type="ORF">AAA799P11_01242</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the V-ATPase F subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18010">
        <property type="protein sequence ID" value="KFM18010"/>
        <property type="gene ID" value="AAA799P11_01242"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1198"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008218">
        <property type="entry name" value="ATPase_V1-cplx_f_g_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036906">
        <property type="entry name" value="ATPase_V1_fsu_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01990">
        <property type="entry name" value="ATP-synt_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159468">
        <property type="entry name" value="SSF159468"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="97" mass="10461" checksum="91BCAFCB050E1626" modified="2014-10-29" version="1">MKIFTVGSKSFVTSFQLAGVPGIISESPQKALEDIKKLTDDSDVGLVLVSDDITESINDELTALRAEKSTLVFALPATGSEKTEVDYRVMLKKILGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXD2</accession>
    <name>A0A087RXD2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01227</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000022">
        <property type="protein sequence ID" value="KFM18136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18136">
        <property type="protein sequence ID" value="KFM18136"/>
        <property type="gene ID" value="AAA799P11_01227"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1180"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="277" mass="31986" checksum="088CDC3DC7C3EB17" modified="2014-10-29" version="1">MSKEIPISDRALGDLLPERITWTLCIHIQKDKEVWVIAGMLSQYLESVTDSIIVRDTNEKPIGTIGGKEIMKSLLENPTSSLFHGTRVDQIMESNPIVVSKETKFKELMELWNERTRAYAIIPNEWGFFSAISAQKILEIGKRCRTELRIENIPKKKLLTFRKGETFGKIINQMFENKSRKIFLEGTTKYLSDRLIIETITEKMKCLKETDDFLNETVDNVGLEEAKVISENLRINEISSIMHDMAHPCVIYKGWIVTPWDICKILLSEKITQYSKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH9</accession>
    <name>A0A087RXH9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribonuclease P protein component 4</fullName>
            <shortName evidence="2">RNase P component 4</shortName>
            <ecNumber evidence="2">3.1.26.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Rpp21</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">rnp4</name>
        <name evidence="3" type="ORF">AAA799P11_01209</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.</text>
            <dbReference type="EC" id="3.1.26.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="2">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Consists of a catalytic RNA component and at least 4-5 protein subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic/archaeal RNase P protein component 4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.5" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18183">
        <property type="protein sequence ID" value="KFM18183"/>
        <property type="gene ID" value="AAA799P11_01209"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030677">
        <property type="term" value="C:ribonuclease P complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001682">
        <property type="term" value="P:tRNA 5'-leader removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00757">
        <property type="entry name" value="RNase_P_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016432">
        <property type="entry name" value="RNP4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007175">
        <property type="entry name" value="Rpr2/Snm1/Rpp21"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04032">
        <property type="entry name" value="Rpr2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004878">
        <property type="entry name" value="RNase_P_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="106" mass="12244" checksum="91DE6810B76240CF" modified="2014-10-29" version="1">MTLEIIVKPAVRKLAMERMQILIKNAISNAKTDPQLSQRQALLARRISTRHKIRMPYELRMVFCKKCKSFIAPGVNSRIRLGRASVKSIRISCYLCGHTYRKIISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM9</accession>
    <name>A0A087RXM9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">50S ribosomal protein L14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rpl14</name>
        <name evidence="5" type="ORF">AAA799P11_01150</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L24e, part of which may contact the 16S rRNA in 2 intersubunit bridges.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the universal ribosomal protein uL14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18233">
        <property type="protein sequence ID" value="KFM18233"/>
        <property type="gene ID" value="AAA799P11_01150"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1111"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01367">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_L14_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_L14P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019972">
        <property type="entry name" value="Ribosomal_L14P_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761">
        <property type="entry name" value="PTHR11761"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01374">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="SSF50193"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00049">
        <property type="entry name" value="RIBOSOMAL_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="140" mass="15083" checksum="75F2F5DD670BE1EB" modified="2014-10-29" version="1">MAKQAGKGVEEFRPYVTKVIPVGANIVCADNSGAKILEVINVPRHKTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPVAAEASEKWPRVANLASMVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR7</accession>
    <name>A0A087RXR7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01193</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18271">
        <property type="protein sequence ID" value="KFM18271"/>
        <property type="gene ID" value="AAA799P11_01193"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1150"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="81" mass="9571" checksum="34E47E3FF7758180" modified="2014-10-29" version="1">MVNFEKVYKKVALQVIDRCHGGIRIKKHGRIIQVYDPKRLWSDGLVGLVIKEECKLANLRDWEIAHVRRHIIEELISRPQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY45</accession>
    <name>A0A087RY45_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01112</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18399">
        <property type="protein sequence ID" value="KFM18399"/>
        <property type="gene ID" value="AAA799P11_01112"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1073"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="12335" checksum="2755E3E2602BE29C" modified="2014-10-29" version="1">MSQIEAQYNEFTNLITQTISNVDVDLLIKIMYLERKLPDAPPMVELTIEYDPGTNIQNKSEAIRAKYGFPMNVGEHGLTLVGQMSVPLIEEISKDRDVKFISGKATPASY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE7</accession>
    <name>A0A087RYE7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Adenine deaminase</fullName>
            <shortName evidence="5">Adenase</shortName>
            <shortName evidence="5">Adenine aminase</shortName>
            <ecNumber evidence="3 5">3.5.4.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">ade</name>
        <name evidence="8" type="ORF">AAA799P11_01071</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>adenine + H(+) + H2O = hypoxanthine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:23688"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.2" evidence="3 5"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18501">
        <property type="protein sequence ID" value="KFM18501"/>
        <property type="gene ID" value="AAA799P11_01071"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1033"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000034">
        <property type="term" value="F:adenine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006146">
        <property type="term" value="P:adenine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01518">
        <property type="entry name" value="Adenine_deamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006679">
        <property type="entry name" value="Adenine_deam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026912">
        <property type="entry name" value="Adenine_deam_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11113:SF2">
        <property type="entry name" value="PTHR11113:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13382">
        <property type="entry name" value="Adenine_deam_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="6">
        <location>
            <begin position="76"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="domain" description="Adenine_deam_C" evidence="7">
        <location>
            <begin position="414"/>
            <end position="580"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="587" mass="64249" checksum="A1B8835E0973560C" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK0</accession>
    <name>A0A087RYK0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01041</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18554">
        <property type="protein sequence ID" value="KFM18554"/>
        <property type="gene ID" value="AAA799P11_01041"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1001"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="200"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="227"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="257" mass="26760" checksum="576374DD7607AFF8" modified="2014-10-29" version="1">MIDQLWLIPLGFAAGVLGSMIGLGGGIIVVPVLTFLGLPPTTAASNSLFAALSNAIASTISYSKQKRIEYSLGLKLGLLTVPGTVLGAIASSDVASDIFKILFGFVLIASAAYIFLRKKIETKEKKVSLQMMIFAIGASFFAGIISSFFGIGGGIVFVPLMVVGMGMAMKKAAPTSQMILLFASSSGVIVHSLLGHPDFLQAGFLAIGSFIGGLVGARLSIDIKERYLQILVSVVILIAAGKLFFDSLTGNAMSLGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK7</accession>
    <name>A0A087RYK7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein CcdB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccdB</name>
        <name evidence="2" type="ORF">AAA799P11_01048</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18561">
        <property type="protein sequence ID" value="KFM18561"/>
        <property type="gene ID" value="AAA799P11_01048"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1010"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="1">
        <location>
            <begin position="3"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="13280" checksum="427623B1ECD7440D" modified="2014-10-29" version="1">MAKIMIADDSDAIRLVLKDILSIGEHEVVVEATDGAEAVDFYKQHNPEILLLDLAMPKKDGLDVVKDVIAYDSNAKIVLITASDDQKIINECLQSGATSYVSKPFDFNSVLKAINDISGNDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL0</accession>
    <name>A0A087RYL0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01051</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18564">
        <property type="protein sequence ID" value="KFM18564"/>
        <property type="gene ID" value="AAA799P11_01051"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="45" mass="5725" checksum="B857559D477A7F34" modified="2014-10-29" version="1">MDEHEKNKEFYKNCIQYFEFLRKVGKKDYEFEDEYYFTMPAISNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL5</accession>
    <name>A0A087RYL5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01056</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18569">
        <property type="protein sequence ID" value="KFM18569"/>
        <property type="gene ID" value="AAA799P11_01056"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1018"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="124" mass="14620" checksum="E1F936DA437E7F5F" modified="2014-10-29" version="1">MEQKDYRDICDTIATISPYIRFVGVIGESGELLAYKRRQDLVPLLNEKNTQYQFSHIAIKTDLEGFFDKNLGEIEFVWEERKKVQTISFAIKKERVWISIDKKVIRSEMLRIIDSCLPIVKKYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ33</accession>
    <name>A0A087RZ33_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP-dependent DNA helicase Hel308</fullName>
            <ecNumber evidence="1">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hel308</name>
        <name evidence="4" type="ORF">AAA799P11_01032</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="1">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the helicase family. Hel308 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18737">
        <property type="protein sequence ID" value="KFM18737"/>
        <property type="gene ID" value="AAA799P11_01032"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.993"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00442">
        <property type="entry name" value="Helicase_Hel308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022965">
        <property type="entry name" value="Helicase_Hel308"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 4" id="KW-0347">Helicase</keyword>
    <keyword evidence="1 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="33"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="238"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="709" mass="79217" checksum="193B4E6F659E2A27" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ90</accession>
    <name>A0A087RZ90_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FemAB family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01003</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18794">
        <property type="protein sequence ID" value="KFM18794"/>
        <property type="gene ID" value="AAA799P11_01003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="134"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="316" mass="37793" checksum="B42F0932063A1126" modified="2014-10-29" version="1">MNYMLNFEISQNPPSNWNKFFLDVGYGIFSQTVEYSKYVEKWIGWEPFFVQIMDNDDHVLLQNLIFRYNPGISKVPSVAQKFYKKFKKSYRWTYGPISLNENAIIAFFEYFKNTKKHIHGTTHPLLFSPKLQNMEKWSTSLIDLRNSKEVLEQNLDKHSCKKNIKRSIERHVKVENISKKNFVDYFELLSTFRKETEHVEPNYEELKDFWELLQPIGFDGFLAYKDEIPVGGLTFGYFNNHIIEVGVARSKIDYTEKLYSQDLIKWKIIEWGVDHKMNYFDLAGYNPDPQNTKEMGIKKYKEKWGGKHFDYWLVRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ92</accession>
    <name>A0A087RZ92_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbonic anhydrase-acetyltransferase protein</fullName>
            <ecNumber evidence="2">2.3.1.158</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapH</name>
        <name evidence="2" type="ORF">AAA799P11_01005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.158" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18796">
        <property type="protein sequence ID" value="KFM18796"/>
        <property type="gene ID" value="AAA799P11_01005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046027">
        <property type="term" value="F:phospholipid:diacylglycerol acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="193" mass="21239" checksum="88E9696219F000FA" modified="2014-10-29" version="1">MNSKKSKHSDEFYQNLLSTYKQQRNELKKKWDRVLPFNELISDRWEKASFLNAKNGTSIYDNSYIFGKVRIGKNTWIGPFTILDGSGGLLSIGSNCSVSTGVQIYTHNTVKWAVSGGKSDYEKKPVKIGDNCYVGPNSIIGMGVTIGKGSVIGTSSFVNSKIPPHSIAFGSPAKVVGKVIIKGKTVNFEYFNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB7</accession>
    <name>A0A087RZB7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00942</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18821">
        <property type="protein sequence ID" value="KFM18821"/>
        <property type="gene ID" value="AAA799P11_00942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="47" mass="5399" checksum="20734257634CBAAE" modified="2014-10-29" version="1">MGKRVTIMLDDNLVKKLREKQAKLIKETAKPVSFSLVVNETLRKSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC0</accession>
    <name>A0A087RZC0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18824">
        <property type="protein sequence ID" value="KFM18824"/>
        <property type="gene ID" value="AAA799P11_00945"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="34" mass="3655" checksum="1F199BF2DB5C6067" modified="2014-10-29" version="1">MNIHIEKKIDNLAMLVMSGVVIGLLVGFLIALTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC2</accession>
    <name>A0A087RZC2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Proline dehydrogenase 2 protein</fullName>
            <ecNumber evidence="6">1.5.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ycgM</name>
        <name evidence="6" type="ORF">AAA799P11_00947</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid degradation; L-proline degradation into L-glutamate; L-glutamate from L-proline: step 1/2.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.2" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18826">
        <property type="protein sequence ID" value="KFM18826"/>
        <property type="gene ID" value="AAA799P11_00947"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.913"/>
    <dbReference type="UniPathway" id="UPA00261">
        <property type="reaction ID" value="UER00373"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004657">
        <property type="term" value="F:proline dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010133">
        <property type="term" value="P:proline catabolic process to glutamate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008219">
        <property type="entry name" value="PRODH_bac_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002872">
        <property type="entry name" value="Proline_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015659">
        <property type="entry name" value="Proline_oxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13914">
        <property type="entry name" value="PTHR13914"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01619">
        <property type="entry name" value="Pro_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000196">
        <property type="entry name" value="Pro_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="SSF51730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pro_dh" evidence="5">
        <location>
            <begin position="32"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="290" mass="34137" checksum="23E95EC9D25A900D" modified="2014-10-29" version="1">MVIGTQFMEKFLFKIAKQWIAGNTVDDALISAKKAYKSKRHVIINKLGEYHTSKKQINTTMKEYEKIIGSFRRWKIRGAISIKPTQLGLSINQKEFYKNFEKIIQTARNAHVFVWLDMESSEHTDETIEIYHSFFSKYERLGIALQANLKRAEHDLRDLQKTGAKIRLTKGAYRENTKIAFKSRKGVDDNYLKLMKMLFKNGNEFALATHDEKIIHKAKTLSKKYPRKFEFQFLKGIREEIKSELIKQKFVVSDYIPYGTRWLAYSVRRIKERKRNILLLGSSLIQSQRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH5</accession>
    <name>A0A087RZH5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18879">
        <property type="protein sequence ID" value="KFM18879"/>
        <property type="gene ID" value="AAA799P11_00910"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="46" mass="5113" checksum="12F47979644CF15A" modified="2014-10-29" version="1">MTQTNELESTYAAIVETKEELLKMISKKLSMSKDSEYTVATIVAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI7</accession>
    <name>A0A087RZI7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00922</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18891">
        <property type="protein sequence ID" value="KFM18891"/>
        <property type="gene ID" value="AAA799P11_00922"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.885"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="15175" checksum="CC494D17F5FD6275" modified="2014-10-29" version="1">MENIEELEKLCKKITKLDPKMRSARFINSRGHLMAGGMKEGLLSLEAQKQDEMMFMELALRVRMRHEFDKEFGMVHFSMSYRDKVIVMSFPLSNDDVLLVSCEKDINFGKIPFKILKLIEPLKNAPMKTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS2</accession>
    <name>A0A087RZS2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00828</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18976">
        <property type="protein sequence ID" value="KFM18976"/>
        <property type="gene ID" value="AAA799P11_00828"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="465" mass="51317" checksum="14A81B901871C42E" modified="2014-10-29" version="1">MKPVFVFLFLVLFVSLLSSTALGVIDSPRKQMVNGVPAEEVICKNELQLMIRSNGDAICAKLLSVEKWISSKNAVVIETAIKDSDNHSKEEQMDVDISPEKILVKSARDTYALGTSMAFTGEAIPNTDLEISLEDSKGDIVYVDILEVDDSGHVQFEIATDDTFTKGAYFLILKQEEDSEIVPIQIGEASGDIAAVIEKFHYDFNSKASVEIFGPSSADISLAVFDSRNDVRFEETIPLDSAGYAEYLIDLSGYKKGNYYLVLKHASEETIEEFTVGLGVGIDPIEIITDDNYYNLGETVFLIGESSDMTQILIKLFDPTGEIIDVVEYYTDRDGKFSYPLEIPLGKQSGLWTVKVSNGERISEVTFEVVTDDKILTIQVDKDEPYIQGEFVIISGTGITSESQALIQIKSVDELYEIIPKVTKEGTFSEAWQIPDTGGSESYTVVIVDGDDKATTGFQVTYYAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU2</accession>
    <name>A0A087RZU2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc finger C2H2-type domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00848</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18996">
        <property type="protein sequence ID" value="KFM18996"/>
        <property type="gene ID" value="AAA799P11_00848"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.815"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="1">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="13698" checksum="943E6E7978F06A58" modified="2014-10-29" version="1">MLTIDCTDVLSIKHELVVYVSDQVAAIPTLKNNQFTLSTLDDDEKIDTNTVITAIKEFLDSIGEGRNFAVIGNNNMVSITSVSGKVIEREPAQQQEMFSCSHCGFVTQYQVELETHMRIHYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0K6</accession>
    <name>A0A087S0K6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative snRNP Sm-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00778</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19260">
        <property type="protein sequence ID" value="KFM19260"/>
        <property type="gene ID" value="AAA799P11_00778"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.749"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043231">
        <property type="term" value="C:intracellular membrane-bounded organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120114">
        <property type="term" value="C:Sm-like protein family complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016487">
        <property type="entry name" value="Lsm6/sSmF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="LSM_dom_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11021">
        <property type="entry name" value="PTHR11021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <feature type="domain" description="Sm" evidence="3">
        <location>
            <begin position="12"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="81" mass="9274" checksum="11F61767506E932D" modified="2014-10-29" version="1">MSQSNSAKRPLTTLQKSTKKKVTVRLKNEVEYKGKMDNVDSYMNLIMTDAEELHEGKTIANYGRVIVRGNNVLFIKLENEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M2</accession>
    <name>A0A087S0M2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00794</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19276">
        <property type="protein sequence ID" value="KFM19276"/>
        <property type="gene ID" value="AAA799P11_00794"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.766"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="57" mass="6513" checksum="0FE73E5F3AE50904" modified="2014-10-29" version="1">MDARCPECEKVAVLDDDVTNVKCPHCNFEADYDTYLEIMKDQAINMSSEYIPDRPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S136</accession>
    <name>A0A087S136_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Elongation factor 2</fullName>
            <shortName evidence="7">EF-2</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">fusA</name>
        <name evidence="9" type="ORF">AAA799P11_00764</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7">Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19440">
        <property type="protein sequence ID" value="KFM19440"/>
        <property type="gene ID" value="AAA799P11_00764"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.737"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00054_A">
        <property type="entry name" value="EF_G_EF_2_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004543">
        <property type="entry name" value="Transl_elong_EFG/EF2_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005517">
        <property type="entry name" value="Transl_elong_EFG/EF2_IV"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03764">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00889">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00490">
        <property type="entry name" value="aEF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="8">
        <location>
            <begin position="18"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="27"/>
            <end position="34"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="93"/>
            <end position="97"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="147"/>
            <end position="150"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="Diphthamide" evidence="7">
        <location>
            <position position="595"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="730" mass="80248" checksum="720390BC779473F2" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S191</accession>
    <name>A0A087S191_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00686</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19495">
        <property type="protein sequence ID" value="KFM19495"/>
        <property type="gene ID" value="AAA799P11_00686"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.665"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="365" mass="42226" checksum="5BD5F9B580F89A0B" modified="2014-10-29" version="1">MLRIAVILIISVIALGSFSTQSIFAHQPDFPVQTPEDILKFCEFFYEEYELFGLDGLVDLHPQYPNLRACAILYNHIAWSSTHQARDIVLIAEIEKYLGDSSFLKERHIKKFTTMPAWVIQDTERWTDGQYKDSLYAYGIRALIENNIISPKIVDNVSQRLCIDGLCAKETDYVTYSHTSKYGNTITEKFEVEKIDDDGIMINSKIVSEEGIKNHRFLLDEDSRIPVDDKCCKTEKFLYKTPIKIGDVIDEKYQVYGTVTYPIGNLLREGMVAENQDKTKVIVIDKQTGLLLNEKFEKTEITTNWEKTSVLQTNVFEESEGIQYHDLKIPAWWKTSAMWFTEGLTSEDEYVQALEYMIEKRILIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S194</accession>
    <name>A0A087S194_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">RDD domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00689</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19498">
        <property type="protein sequence ID" value="KFM19498"/>
        <property type="gene ID" value="AAA799P11_00689"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010432">
        <property type="entry name" value="RDD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06271">
        <property type="entry name" value="RDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="RDD" evidence="6">
        <location>
            <begin position="11"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="158" mass="18030" checksum="05EC6C3F3F47C489" modified="2014-10-29" version="1">MSDSNTPKILLAKWSDRFIAWLIDFIIISSISTAIIFVSFGSIDYEFKENMFWAENSQYIPTSVIFFVYWTVLEYKTGQTIGKKILNLKSTNMHGKAPSLKGILISSFGKSFLLPFDVVLGWILTNQNRQRIFNKLGGTIVVKIKDVQDVSDVTYLKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S196</accession>
    <name>A0A087S196_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00701</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19500">
        <property type="protein sequence ID" value="KFM19500"/>
        <property type="gene ID" value="AAA799P11_00701"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.671"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="14484" checksum="DABCF2F9ACA741ED" modified="2014-10-29" version="1">MQDTEISFLAEKVFVHRWPHDTPLWDDSVKQKLDETISKNPEPKKIIVFEKSIKIQDFEFSHLKKIGISVPFFKDECRVIFESQFGELYAHIHITVKSSDYMEIFAQLKSWKSKFFPNDSNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E5</accession>
    <name>A0A087S1E5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00538</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19549">
        <property type="protein sequence ID" value="KFM19549"/>
        <property type="gene ID" value="AAA799P11_00538"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="35" mass="3878" checksum="FD71B54FD324D17E" modified="2014-10-29" version="1">MELVNKIIPFGIGIAVIVIVVFSMSMDYSTEPLHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F6</accession>
    <name>A0A087S1F6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00549</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19560">
        <property type="protein sequence ID" value="KFM19560"/>
        <property type="gene ID" value="AAA799P11_00549"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="9"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8436" checksum="57FE272E7A4CE3C6" modified="2014-10-29" version="1">MTNSFLLLSCSMHSSKKVANQLREISGVEEAIPVHGVYDCVVKTKKISPNEIQNLVSKHIRPMPNVHSVLPLQLIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F7</accession>
    <name>A0A087S1F7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Translation initiation factor eIF-1A protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19561">
        <property type="protein sequence ID" value="KFM19561"/>
        <property type="gene ID" value="AAA799P11_00550"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.534"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4633" checksum="8D05588E381F1430" modified="2014-10-29" version="1">MGKRQVKNEKALKEIRLPETDEEMFGRVIKMMGENVQIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G5</accession>
    <name>A0A087S1G5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NMT1-like domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00558</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19569">
        <property type="protein sequence ID" value="KFM19569"/>
        <property type="gene ID" value="AAA799P11_00558"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.542"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042626">
        <property type="term" value="F:ATPase-coupled transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13553">
        <property type="entry name" value="PBP2_NrtA_CpmA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010067">
        <property type="entry name" value="ABC_SsuA_sub-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044527">
        <property type="entry name" value="NrtA/CpmA_ABC-bd_dom"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01728">
        <property type="entry name" value="SsuA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="341" mass="37023" checksum="C30D3A9AB91830D1" modified="2014-10-29" version="1">MKIRSAIAAGIGAIIVFSALGVALISSDDTHENKIRIAYFPNIGHAIPIVGVEKGFFAEHLGEDVKIETKVFDSGPQAIEALFANSVDLAYVGPGPAINGFLNSNNQNVKILAGAASGGASFIVHPDSEINSATDFAGKKIAAPQIGNTQDVSLRHFLAENQLKPAEKGGSVVVYNIPNPDIYTLFVKGDIDGAWVAEPWATILETELNGNRLFYEEELWPDKEFASVLLIGNVEYIDENSDVWTDFIRAHHETEIWIETNPIETRIVFNDFLDSYLGQSLSDDVVDVALSNIMITADPKPNSVFSFAEKSDALGYLGRNGYDLSGIFYSFDTNSLVEAST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G7</accession>
    <name>A0A087S1G7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00560</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19571">
        <property type="protein sequence ID" value="KFM19571"/>
        <property type="gene ID" value="AAA799P11_00560"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.544"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd13946">
        <property type="entry name" value="LysW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005906">
        <property type="entry name" value="LysW"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40393">
        <property type="entry name" value="PTHR40393"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="55" mass="5787" checksum="7F26BB5DF2942447" modified="2014-10-29" version="1">MNCPECDATLNIPDDAAVGEIVSCPDCGADFEIAKKDGSNVELKQAESVGEDWGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G9</accession>
    <name>A0A087S1G9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Putative [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase</fullName>
            <ecNumber evidence="1">1.2.1.103</ecNumber>
            <ecNumber evidence="1">1.2.1.106</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">argC</name>
        <name evidence="1" type="synonym">lysY</name>
        <name evidence="3" type="ORF">AAA799P11_00562</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in both the arginine and lysine biosynthetic pathways.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[amino-group carrier protein]-C-terminal-N-(1-carboxy-5-oxopentan-1-yl)-L-glutamine + NADP(+) + phosphate = [amino-group carrier protein]-C-terminal-N-(1-carboxy-5-phosphooxy-5-oxopentan-1-yl)-L-glutamine + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:41948"/>
            <dbReference type="Rhea" id="RHEA-COMP:9712"/>
            <dbReference type="Rhea" id="RHEA-COMP:9714"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:78499"/>
            <dbReference type="ChEBI" id="CHEBI:78501"/>
            <dbReference type="EC" id="1.2.1.103"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[amino-group carrier protein]-C-terminal-gamma-(L-glutamyl-5-semialdehyde)-L-glutamate + NADP(+) + phosphate = [amino-group carrier protein]-C-terminal-gamma-(5-phospho-L-glutamyl)-L-glutamate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:52668"/>
            <dbReference type="Rhea" id="RHEA-COMP:13313"/>
            <dbReference type="Rhea" id="RHEA-COMP:13327"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:136717"/>
            <dbReference type="ChEBI" id="CHEBI:136761"/>
            <dbReference type="EC" id="1.2.1.106"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-arginine biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-lysine biosynthesis via AAA pathway; L-lysine from L-alpha-aminoadipate (Thermus route): step 3/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.103" evidence="1"/>
    <dbReference type="EC" id="1.2.1.106" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19573">
        <property type="protein sequence ID" value="KFM19573"/>
        <property type="gene ID" value="AAA799P11_00562"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.546"/>
    <dbReference type="UniPathway" id="UPA00033">
        <property type="reaction ID" value="UER00037"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043870">
        <property type="term" value="F:N-acetyl-gamma-aminoadipyl-phosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003942">
        <property type="term" value="F:N-acetyl-gamma-glutamyl-phosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042450">
        <property type="term" value="P:arginine biosynthetic process via ornithine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019878">
        <property type="term" value="P:lysine biosynthetic process via aminoadipic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00150">
        <property type="entry name" value="ArgC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02083">
        <property type="entry name" value="LysY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000706">
        <property type="entry name" value="AGPR_type-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037535">
        <property type="entry name" value="LysY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000534">
        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012280">
        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01850">
        <property type="entry name" value="argC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="2">
        <location>
            <begin position="2"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="9"/>
            <end position="12"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="315"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="348" mass="38763" checksum="FD39004FD78DB65E" modified="2014-10-29" version="1">MKVGVVGASGYVGGETLRLLVNHPDVEITMVTSRQHVGEYLHRVQPSLKGFTDLTFSELDYDKLTDKCDLVFTAVPHGTATEIVKALYDRGVKIIDLSADYRLHDQEAYDKWYGWEHPHPDYLSKSVFGVPELHREEIKKAQLVSCPGCMAVTSMLALAPLIRNNIIDTDHIVVDSKIGSSGAGSGSGTAHAMRAGVIRPYKPAKHRHTGEIEQELSEIAGKKIHVSMSPHAVDVVRGILCTNHTFMLKDMDEKELWKLYRQTYGEEKFVRLIRDKKGLYKFPDPKFLVGSNFCDIGFDLDEDNHRLIALSASDNLMKGAAGSAIQNMNVMCGFDEMDGLRYTPLTPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I8</accession>
    <name>A0A087S1I8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-hydroxybutyryl-CoA dehydratase protein</fullName>
            <ecNumber evidence="2">4.2.1.55</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">crt</name>
        <name evidence="2" type="ORF">AAA799P11_00581</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.55" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19592">
        <property type="protein sequence ID" value="KFM19592"/>
        <property type="gene ID" value="AAA799P11_00581"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.565"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003859">
        <property type="term" value="F:3-hydroxybutyryl-CoA dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="27187" checksum="3B87951583A8FD9C" modified="2014-10-29" version="1">MSLVTTSTSDGICTVKINRPDKLNAMNTDVAKELIKTFEELNQNDDVKVIILTGEGEKAFSAGADIEYMSKISADESVEYAKTGQLVTATVELVKQPTIAAVNGFALGGGCELAMSCDIRIAADTAKLGQPEVTIGVPPGWGGTQRLMRIVGIAKAKELVYTGKMIKADEAKEIGLVNHVVPLESLQEEALKMAQQIAGNSTMGVQMSKVAINKGRNADLDTGLGLEILAWRNCFTHPDRQERMTAFVNKSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K3</accession>
    <name>A0A087S1K3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Ribosomal RNA large subunit methyltransferase N</fullName>
            <ecNumber evidence="11">2.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">23S rRNA (adenine(2503)-C(2))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">23S rRNA m2A2503 methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">rlmN</name>
        <name evidence="13" type="ORF">AAA799P11_00596</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Specifically methylates position 2 of adenine 2503 in 23S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>adenosine(2503) in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine(2503) in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42916"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10152"/>
            <dbReference type="Rhea" id="RHEA-COMP:10282"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74497"/>
            <dbReference type="EC" id="2.1.1.192"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="11">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="11">Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the radical SAM superfamily. RlmN family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="11"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19607">
        <property type="protein sequence ID" value="KFM19607"/>
        <property type="gene ID" value="AAA799P11_00596"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.580"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070040">
        <property type="term" value="F:rRNA (adenine-C2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030488">
        <property type="term" value="P:tRNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01849">
        <property type="entry name" value="RNA_methyltr_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040072">
        <property type="entry name" value="Methyltransferase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027492">
        <property type="entry name" value="RNA_MTrfase_RlmN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004383">
        <property type="entry name" value="rRNA_lsu_MTrfase_RlmN/Cfr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544">
        <property type="entry name" value="PTHR30544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006004">
        <property type="entry name" value="CHP00048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00275">
        <property type="entry name" value="adenosine_C2_methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00048">
        <property type="entry name" value="rRNA_mod_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 11" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9 11" id="KW-0408">Iron</keyword>
    <keyword evidence="10 11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 11 13" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="7 11" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 11 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="12">
        <location>
            <begin position="105"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="11">
        <location>
            <begin position="169"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="11">
        <location>
            <begin position="224"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <feature type="active site" description="S-methylcysteine intermediate" evidence="11">
        <location>
            <position position="342"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="300"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM19607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="351" mass="38961" checksum="E0D2281CC385813C" modified="2014-10-29" version="1">MTDLYRLLPEEMEKLVIDMGYDRYRADQILLPLYYKFPKDINDIPQLPKKLREKLTEAGYTIGSAKETHRVVSEDGDTTKLLLELSNGSSVETVLMQYEPTKIGGHPRSTICVSTQIGCAMGCVFCATGQMGFETNLKAEHIVSQVIHFAEILEKRGEHVTNLVFMGMGEPMANYDEMIRAVKILTHDRGFGLGQRHITISTIGIASGIEKLAEENLQIGLAISLHAPNNELRKKLVPTAGSHSVEDILESGRKYFKKTGRRVTFEYALMEGINDSPEIANELAKLLRGNGSHVNIIPINPTAGDFKRPSEKNVLEFERILQQSGVNCTVRVEKGTEISAACGQLRTDIIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L5</accession>
    <name>A0A087S1L5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Dihydroorotate dehydrogenase</fullName>
            <shortName evidence="8">DHOD</shortName>
            <shortName evidence="8">DHODase</shortName>
            <shortName evidence="8">DHOdehase</shortName>
            <ecNumber evidence="8">1.3.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">pyrD</name>
        <name evidence="10" type="ORF">AAA799P11_00608</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the conversion of dihydroorotate to orotate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(S)-dihydroorotate + A = AH2 + orotate</text>
            <dbReference type="Rhea" id="RHEA:18073"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:30864"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="8">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Pyrimidine metabolism; UMP biosynthesis via de novo pathway.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.-.-" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19619">
        <property type="protein sequence ID" value="KFM19619"/>
        <property type="gene ID" value="AAA799P11_00608"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.595"/>
    <dbReference type="UniPathway" id="UPA00070"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004152">
        <property type="term" value="F:dihydroorotate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04740">
        <property type="entry name" value="DHOD_1B_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00224">
        <property type="entry name" value="DHO_dh_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033888">
        <property type="entry name" value="DHOD_1B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005720">
        <property type="entry name" value="Dihydroorotate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024920">
        <property type="entry name" value="Dihydroorotate_DH_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012135">
        <property type="entry name" value="Dihydroorotate_DH_1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001295">
        <property type="entry name" value="Dihydroorotate_DH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01180">
        <property type="entry name" value="DHO_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000164">
        <property type="entry name" value="DHO_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01037">
        <property type="entry name" value="pyrD_sub1_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00912">
        <property type="entry name" value="DHODEHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6 8" id="KW-0288">FMN</keyword>
    <keyword evidence="7 8 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHO_dh" evidence="9">
        <location>
            <begin position="5"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="71"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="190"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="22"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="46"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="241"/>
            <end position="242"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="263"/>
            <end position="264"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="303" mass="32372" checksum="78A6A1EC045CD76A" modified="2014-10-29" version="1">MEPNLATSIGPIQLDRPVMLASGILGISLDVFNRLYRSGVGAVVTKSLSTEPWEGYPNPTIFSVKGGGWINAVGLSNPGAANFAKMIEPNHDVPIVVSLVGSVPEDFEKMIKQFENCKVTAYELNLSCPHVAKVGLEVGDDPELVKKIVTTVKNSTNVPVIAKIGLGTTHYLDTVGTAIESGIDAITAINTVRAMAIDVETQRPILSNKFGGLSGTPIKPIALRCVYEISSKYDIPVIGCGGISNWEDAVEFFLAGASAVQLGSAIGDNWIDVFNEINIGISQYMTKKNYSKIEEMIGLAKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N1</accession>
    <name>A0A087S1N1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar-specific transcriptional regulator TrmB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00624</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19635">
        <property type="protein sequence ID" value="KFM19635"/>
        <property type="gene ID" value="AAA799P11_00624"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.610"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002831">
        <property type="entry name" value="Tscrpt_reg_TrmB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01978">
        <property type="entry name" value="TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TrmB" evidence="1">
        <location>
            <begin position="13"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="116" mass="13546" checksum="20D8DA3CE110325E" modified="2014-10-29" version="1">MDFKIENDLISEIHLTQVQAKVYLLVTCYGKMSPQTISEKLKISKDDAENTAKDLMNFGAFIDISETEYEAMHPRFTVVNMYRRMCERENIEFKRNKIVDSIGVVLEKPYDDARTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N3</accession>
    <name>A0A087S1N3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00626</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19637">
        <property type="protein sequence ID" value="KFM19637"/>
        <property type="gene ID" value="AAA799P11_00626"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.612"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="SSF49764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="170" mass="19441" checksum="129FD1C539E6019F" modified="2014-10-29" version="1">MVIKTKDTLYLVNPNFDCLASYKGAYSNEQSLNFVIPIIVILFLGIIYIMTQRADSGFVSFILIGAAAITMFYWVRVLKKMTKDQKPLYTQSREQEQKNWVYDLIKGEGEFVFVAEVPGPEDKIAVRLVDGMLYIRGTAGFSKEVPIEGVNDMQIFDFKYRNGVLTLRIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P8</accession>
    <name>A0A087S1P8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">Adenylosuccinate synthetase</fullName>
            <shortName evidence="7">AMPSase</shortName>
            <shortName evidence="7">AdSS</shortName>
            <ecNumber evidence="7 8">6.3.4.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">IMP--aspartate ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">purA</name>
        <name evidence="9" type="ORF">AAA799P11_00641</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>GTP + IMP + L-aspartate = GDP + 2 H(+) + N(6)-(1,2-dicarboxyethyl)-AMP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15753"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57567"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="6.3.4.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="7">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7 8">Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7 8">Belongs to the adenylosuccinate synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.4" evidence="7 8"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19652">
        <property type="protein sequence ID" value="KFM19652"/>
        <property type="gene ID" value="AAA799P11_00641"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.627"/>
    <dbReference type="UniPathway" id="UPA00075">
        <property type="reaction ID" value="UER00335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004019">
        <property type="term" value="F:adenylosuccinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044208">
        <property type="term" value="P:'de novo' AMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd03108">
        <property type="entry name" value="AdSS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.300.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.440.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.170.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00011">
        <property type="entry name" value="Adenylosucc_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018220">
        <property type="entry name" value="Adenylosuccin_syn_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042109">
        <property type="entry name" value="Adenylosuccinate_synth_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042110">
        <property type="entry name" value="Adenylosuccinate_synth_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042111">
        <property type="entry name" value="Adenylosuccinate_synth_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001114">
        <property type="entry name" value="Adenylosuccinate_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11846">
        <property type="entry name" value="PTHR11846"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00709">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00788">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01266">
        <property type="entry name" value="ADENYLOSUCCIN_SYN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1 7 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 7 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 7 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="IMP binding" evidence="7">
        <location>
            <begin position="13"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="7">
        <location>
            <begin position="40"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="248"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="12"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="42"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="280"/>
            <end position="282"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="320"/>
            <end position="322"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="333" mass="35772" checksum="F42653BDF3EB5EB3" modified="2014-10-29" version="1">MTSTVVVGGFFGDEGKGKIISYLAIKDNPKVIVRGGAGPNAGHTIKDGDKVYKVRMLPSGFLNKDAKVMIGPGVVINPDVLQKEIDDFGVTGRAFIDKHCGVIEETHLARDSKGELKEKIGSTGSGTGPANADRAMRVLRLAKDFDSLSSIITDVPAEVNSALDKNENVLVEGTQGTFLSLWHGTYPFVTSKDVTASGICADIGLGPTKVDEVIVVFKSYVTRVGTGPLDKELSLEEAEKKGWSEFGTVTGRQRRAADFDFDLARRAIMLNGATQISITKLDVLFTDCAGKTSYDELSEDAKAFIKNIEDELNTPVTIIGTGPTVNDVIDRRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q5</accession>
    <name>A0A087S1Q5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">THUMP domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00648</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19659">
        <property type="protein sequence ID" value="KFM19659"/>
        <property type="gene ID" value="AAA799P11_00648"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.634"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11717">
        <property type="entry name" value="THUMP_THUMPD1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004114">
        <property type="entry name" value="THUMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040183">
        <property type="entry name" value="THUMPD1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13452">
        <property type="entry name" value="PTHR13452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02926">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00981">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51165">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="THUMP" evidence="3">
        <location>
            <begin position="55"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="78"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="173" mass="19835" checksum="D4A7A61C6E98A171" modified="2014-10-29" version="1">MNLIITCARHLEPETEEELRGFLDEFGDSDPKVTITSMSGILTAETKLDPVEVVRKIKEMLLDEPWSVRYCLRIIPIQRTVETKIEEIEKIVEELSDNISKEEKYRISIEKRNSDMSSQDIITKIAKKIKNQVSLEFPDKVVLIEIIGNKTGISVLKKSDILSTEKTKRSISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q7</accession>
    <name>A0A087S1Q7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TatD-related deoxyribonuclease protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19661">
        <property type="protein sequence ID" value="KFM19661"/>
        <property type="gene ID" value="AAA799P11_00650"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.636"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01310">
        <property type="entry name" value="TatD_DNAse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001130">
        <property type="entry name" value="TatD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01026">
        <property type="entry name" value="TatD_DNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005902">
        <property type="entry name" value="DNase_TatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="272" mass="31120" checksum="1D236523A5039085" modified="2014-10-29" version="1">MSEKISLRNRFIQTILRIDQDMTWYFDSHIHLSDHQYCPNMDFILQEMDYLKIKACCVSMDVKNSLETLELAKKSSLVLPFIGIHPECANDELEKTVIMIEENHDTLAGVGEIGLDPTYTNNEQDSKRQTHVFETLLSCAEKYNKPVSIHSRKSLDEVFEVMTSYNTKHALLHWFDGSKKQLSKAMDMGFFVSFGPVMIYANDKQTLLSKSDESKILVETDGPVRFSRCFEMKPADIGFIPSVIFSASKVLRKSFDETAELLENNSNSYLGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R5</accession>
    <name>A0A087S1R5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Copper resistance protein A</fullName>
            <ecNumber evidence="6">1.16.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">copA</name>
        <name evidence="6" type="ORF">AAA799P11_00658</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.16.3.1" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19669">
        <property type="protein sequence ID" value="KFM19669"/>
        <property type="gene ID" value="AAA799P11_00658"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004322">
        <property type="term" value="F:ferroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033138">
        <property type="entry name" value="Cu_oxidase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002355">
        <property type="entry name" value="Cu_oxidase_Cu_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00079">
        <property type="entry name" value="MULTICOPPER_OXIDASE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00080">
        <property type="entry name" value="MULTICOPPER_OXIDASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plastocyanin-like" evidence="5">
        <location>
            <begin position="159"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="4">
        <location>
            <begin position="329"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="425" mass="47099" checksum="257508B365C05E1E" modified="2014-10-29" version="1">MTKSRTSLMLIALSVTLVASLSVGFLQESSAVKGQGVGLPEIGSAKVCGDRLCSEPAKSSSSQKETTIQTTSQTSECKSYEGQTRTYYIAADEVEWDYAPMGLNQMKGQEFNEDENVFVENTSDRIGSKYIKALYREYTDDSFSKLKPRSSEWEHLGTLGPIIHAEVCDTIKVVFKNNAKELDYSVHPHGVFYEKDSEGAEYNDDSSTDTKTDGIVSPGQTYTYIWSVPERAGPGPNDPSSIIWMYHSHVNSPMDTNSGLVGPMVVTAKGMADADGRPIDVDREMVSLFTVSDENSSNYLCDNLEKYTDETCDNEELVGDDDFAESNLMHGINGYVYGNLPGQTLNKGDHVRWYLIGMGTEVDLHTPHWHGNTVLWSGMRVDVMELMPASLKTVDFVPDNVGTWMFHCHVNDHISAGMMSLFEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S2</accession>
    <name>A0A087S1S2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Plastocyanin protein</fullName>
            <ecNumber evidence="3">1.7.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00670</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.1" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19676">
        <property type="protein sequence ID" value="KFM19676"/>
        <property type="gene ID" value="AAA799P11_00670"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.654"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050421">
        <property type="term" value="F:nitrite reductase (NO-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002386">
        <property type="entry name" value="Amicyanin/Pseudoazurin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00155">
        <property type="entry name" value="AMICYANIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Copper-bind" evidence="2">
        <location>
            <begin position="70"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="150" mass="16442" checksum="62A929FCDA2E09FD" modified="2014-10-29" version="1">MIKKIIASSIVGIAIIVSLAVAFSTETEPQPEPAPESNPTYSMQGVLQSDVMTGGDVIMPTKVSRPGCEETDRCYIPSVITISAGDSVTWVNEDSAFHSVTSGFYDEPQDLFDSGHMDPFDSYTLTFDEKGTFDYFCTLHPWMEGQVIVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1T2</accession>
    <name>A0A087S1T2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19686">
        <property type="protein sequence ID" value="KFM19686"/>
        <property type="gene ID" value="AAA799P11_00685"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007254">
        <property type="entry name" value="DUF373"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04123">
        <property type="entry name" value="DUF373"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="59" mass="6497" checksum="2EEDF92786EF4089" modified="2014-10-29" version="1" fragment="single">TRKVLERFSANGAVIVSDGEDDESVIPVIQNVLSDFAFFRMVALYFGLIVNTNSYSSPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S201</accession>
    <name>A0A087S201_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Succinyl-diaminopimelate desuccinylase protein</fullName>
            <ecNumber evidence="2">3.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapE</name>
        <name evidence="2" type="ORF">AAA799P11_00500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.18" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19755">
        <property type="protein sequence ID" value="KFM19755"/>
        <property type="gene ID" value="AAA799P11_00500"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.478"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009014">
        <property type="term" value="F:succinyl-diaminopimelate desuccinylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="1">
        <location>
            <begin position="182"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="440" mass="48878" checksum="65932439A24C3D63" modified="2014-10-29" version="1">MENLISDLQTLIRQPSVSAKNEGIEECAKLVQKLLKKSGVKSEILRLKKGVAPIVYGEIKSKQNPNKTLMFYNHYDVQPAEPFDLWDSPPFSGIRKGNKIFGRGATDDKGELITRIKAVEACLKTTGDVPCNIKFVIEGEEETGSAHIEDYLKKYKKKFSCDGVIWEFGYVDAKNRPIIGLGMKGLLFVELSVKESIRDAHSSLAVLIKNPAWRLIEAVHTLRDSNGKILIKDWYKEVTPFSKQDLKLIKNELFDENDFKKEFGIKSFVGNKKGIDAKKALVGGATCNVAGFVSGYTGDGAKTVLPSESLVKIDFRLVPKMDPKKQVMRLKKHLKSKGFSDIGIKVFHGEAAARTNSSDPFVSQVKDAANKSFGKSILNVSNAGTGPMYPFVDILKAPCISIGSTYMFSRIHSPNEFARIDLLKKMTKCACLIMENFGKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S228</accession>
    <name>A0A087S228_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein</fullName>
            <ecNumber evidence="2">3.1.1.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00527</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.61" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19782">
        <property type="protein sequence ID" value="KFM19782"/>
        <property type="gene ID" value="AAA799P11_00527"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.509"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008984">
        <property type="term" value="F:protein-glutamate methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="5"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="140" mass="15432" checksum="EB60733DBA18F871" modified="2014-10-29" version="1">MTNNFKTILVPLDGSKYSKKALLRASEISHAFDSKIILLYVAEKSSVNLLDRKEYLTMLRKFGKKTLDDANKTLSKKGLSAKSFLKEGNIVSEIEKIVKSEKCDLVVVGNKGLGAVTRFLLGSVSNKLAQHSNCSLLIVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S230</accession>
    <name>A0A087S230_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inosine-5'-monophosphate dehydrogenase protein</fullName>
            <ecNumber evidence="3">1.1.1.42</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00529</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.42" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19784">
        <property type="protein sequence ID" value="KFM19784"/>
        <property type="gene ID" value="AAA799P11_00529"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.511"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004450">
        <property type="term" value="F:isocitrate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="10"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="74"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="145" mass="16185" checksum="94D3DEFA9A124254" modified="2014-10-29" version="1">MDNTFVNQVMSKNVLTSEKSTSLQDAAQEMKSRNVGCVIVTDKSKPIGIVTERDFVTKVAAEGRPLFTEISEVMSSPLITVEPEETIWEASEIMKEKLIHKLPVIENEQVIGVITTSDIVRISSVGSDSQMRKICDQILMRIKDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S232</accession>
    <name>A0A087S232_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00531</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19786">
        <property type="protein sequence ID" value="KFM19786"/>
        <property type="gene ID" value="AAA799P11_00531"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="71" mass="8847" checksum="AEF5145F1D232EDE" modified="2014-10-29" version="1">MKNAQCKKCLNKFFEKEIYTIQQFQYREEPPYKWSLEYFKKTGIDEWDSFCEKCLLEYSKKSLESWKKLQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S287</accession>
    <name>A0A087S287_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutamate-1-semialdehyde 21-aminomutase protein</fullName>
            <ecNumber evidence="2">5.4.3.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hemL</name>
        <name evidence="2" type="ORF">AAA799P11_00370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.3.8" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19841">
        <property type="protein sequence ID" value="KFM19841"/>
        <property type="gene ID" value="AAA799P11_00370"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.359"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042286">
        <property type="term" value="F:glutamate-1-semialdehyde 2,1-aminomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="257" mass="28364" checksum="BB2C5ECC5BF4C53A" modified="2014-10-29" version="1" fragment="single">VSKNTLVVQYNNIEDLQKTIQKNKDIAGVIVEPILANMGLILPEKNFLSDLRKITKENNIPLIFDEVVTGFRVAPGGAQQHFGIKPDLTTMAKALSNGFTISAVGGKKEIMDLLSPGGKVYQASTFAGNPISVSAAIASIKTINKLKNKLYSKLERFNLLFSTALDDMATDMGIPHQINFTASMFQIFFTNKPVTNYETSKNANAKKFQKMFKTLLKKGVFIAPSQFEVVFLSDAHTENDLNKTLDAYHLALKSVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S295</accession>
    <name>A0A087S295_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Cysteine desulfurase</fullName>
            <ecNumber evidence="3 5">2.8.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">csd</name>
        <name evidence="7" type="ORF">AAA799P11_00378</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>[sulfur carrier]-H + L-cysteine = [sulfur carrier]-SH + L-alanine</text>
            <dbReference type="Rhea" id="RHEA:43892"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="EC" id="2.8.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.7" evidence="3 5"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19849">
        <property type="protein sequence ID" value="KFM19849"/>
        <property type="gene ID" value="AAA799P11_00378"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.367"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006534">
        <property type="term" value="P:cysteine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06453">
        <property type="entry name" value="SufS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010970">
        <property type="entry name" value="Cys_dSase_SufS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016454">
        <property type="entry name" value="Cysteine_dSase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005572">
        <property type="entry name" value="NifS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01979">
        <property type="entry name" value="sufS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="6">
        <location>
            <begin position="29"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004506"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="414" mass="46313" checksum="8476FEA9F25E301A" modified="2014-10-29" version="1">MQSAESTFENLRKDFPILTRTVRDNKHLVYLDNASTTQKPNQVIDAITDYYQNHNANIHRAVYALAEEATEAYESTRDKIANFVNIKDRQEIIFVRGTTEAINLVAYAWGRPHINEGDIIVTTEYEHHSNIVPWQLLTQEKHAKLEYIGMDDNGELILDDLDKLLATGKVKLVTFSLMSNVLGTITDAQKIIEKCKAAGVPTLIDGAQAVPHMKVDLEQLGCDFFAFSGHKMLGPTGIGVLWVRKSVLNTMSPFHGGGDMIREVHKYETTWNDLPYKFEAGTPNIADVVGLGAAIDYLTKIGMDNIREHEIELTKYAIEKLSQVKGLHIYGTKDISKRGGVISFNFADVHPHDVAQIIDEEGIAVRSGHHCAQVLMERLNVAATSRASFYIYNTKEDIDVLVNSLNTVAKVFKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B4</accession>
    <name>A0A087S2B4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ACR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00402</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0235 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19868">
        <property type="protein sequence ID" value="KFM19868"/>
        <property type="gene ID" value="AAA799P11_00402"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003746">
        <property type="entry name" value="DUF167"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036591">
        <property type="entry name" value="YggU-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02594">
        <property type="entry name" value="DUF167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01152">
        <property type="entry name" value="DUF167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69786">
        <property type="entry name" value="SSF69786"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="70" mass="8151" checksum="D184B5B1CC1DFEE0" modified="2014-10-29" version="1">MIYKVQVEFYEEFFEIENDKIIIGVKSKPVKGEANKEVIKKIAKYFEVSTSQVQIKTGHKSKDKIIEISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B5</accession>
    <name>A0A087S2B5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter protein</fullName>
            <ecNumber evidence="5">2.7.1.69</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00403</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.69" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19869">
        <property type="protein sequence ID" value="KFM19869"/>
        <property type="gene ID" value="AAA799P11_00403"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.388"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103111">
        <property type="term" value="F:D-glucosamine PTS permease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd03217">
        <property type="entry name" value="ABC_FeS_Assembly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010230">
        <property type="entry name" value="FeS-cluster_ATPase_SufC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43204">
        <property type="entry name" value="PTHR43204"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01978">
        <property type="entry name" value="sufC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="256" mass="28331" checksum="7D282828210F8B77" modified="2014-10-29" version="1">MAVLEIKDLHVTREGKEILKGVNLKTRPGEVHAIMGPNGSGKSTLAYTLLAHPKYEVTQGDILLDGESILELTADERAKKGLFLGFQYPTEVSGVGFSHFLRTAYNSLSKALEGDDREVFITVREFQKYLKENLEKVGLKEEFLSRYLNEGFSGGEKKRAEVLQMAVLKPKISILDEPDSGLDIDAVQAVAKAISQVSGKDATVIVITHYARILKFLDKLDYVHVFARGKVLKTGDASLADKLESEGYDWVLEQTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D0</accession>
    <name>A0A087S2D0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">Translation initiation factor 5A</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">Hypusine-containing protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 11">eIF-5A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">eif5a</name>
        <name evidence="13" type="ORF">AAA799P11_00423</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Functions by promoting the formation of the first peptide bond.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the eIF-5A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19884">
        <property type="protein sequence ID" value="KFM19884"/>
        <property type="gene ID" value="AAA799P11_00423"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.403"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045901">
        <property type="term" value="P:positive regulation of translational elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045905">
        <property type="term" value="P:positive regulation of translational termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00085">
        <property type="entry name" value="eIF_5A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001884">
        <property type="entry name" value="IF5A-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019769">
        <property type="entry name" value="Trans_elong_IF5A_hypusine_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022847">
        <property type="entry name" value="Transl_elong_IF5A_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020189">
        <property type="entry name" value="Transl_elong_IF5A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11673">
        <property type="entry name" value="PTHR11673"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01287">
        <property type="entry name" value="eIF-5a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003025">
        <property type="entry name" value="eIF5A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01376">
        <property type="entry name" value="eIF-5a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00037">
        <property type="entry name" value="eIF_5A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00302">
        <property type="entry name" value="IF5A_HYPUSINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 11" id="KW-0385">Hypusine</keyword>
    <keyword evidence="6 11 13" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="7 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eIF-5a" evidence="12">
        <location>
            <begin position="74"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="modified residue" description="Hypusine" evidence="11">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00032030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00032163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM01376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM19884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="136" mass="15022" checksum="711196CD368D102C" modified="2014-10-29" version="1">MSKPSDLGSLKIGSYILLPHSDQPSGEPCRIVEYDTSKPGKHGAAKARIVAEGIFDGQKRPHVGPVSMQIHVPMINKKVGQIISMTGDTVQLMDSETFETIDVTLIDDEVKGKLENGQNVEYWVVMDKTKIMRIKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D5</accession>
    <name>A0A087S2D5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00428</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19889">
        <property type="protein sequence ID" value="KFM19889"/>
        <property type="gene ID" value="AAA799P11_00428"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.407"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="236" mass="27099" checksum="99F9D8A5026BEFED" modified="2014-10-29" version="1">MLDPLVRFKDAHSKGIIPDDVYDLTLKRFPITVAGINRIEKASGIRYPVAYVEPSLVISTPNPNSYEYGILFARTIPVVFEDKFQVVIQISAPLVAYGLKGTIHAILAHEFLHFLELIRKISKMELLSDEISGNLFENVYSDETRLFEPRVVFKDRTLLNHITKKFPAGFRDYKLEDKVTKFWIDRNLPKTNISLDSNTVKLPADALSKIKLDPSFISKIEQLEEKSSKIRKKKLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L8</accession>
    <name>A0A087S2L8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">Biotin synthase</fullName>
            <ecNumber evidence="3 12">2.8.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 15" type="primary">bioB</name>
        <name evidence="15" type="ORF">AAA799P11_00276</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>(4R,5S)-dethiobiotin + [sulfur carrier]-SH + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2 5'-deoxyadenosine + [sulfur carrier]-H + biotin + 2 L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:22060"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57586"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="ChEBI" id="CHEBI:149473"/>
            <dbReference type="EC" id="2.8.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12 13">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="12 13">Binds 1 [2Fe-2S] cluster. The cluster is coordinated with 3 cysteines and 1 arginine.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12 13">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12 13">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Cofactor biosynthesis; biotin biosynthesis; biotin from 7,8-diaminononanoate: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the radical SAM superfamily. Biotin synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.6" evidence="3 12"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19972">
        <property type="protein sequence ID" value="KFM19972"/>
        <property type="gene ID" value="AAA799P11_00276"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.269"/>
    <dbReference type="UniPathway" id="UPA00078">
        <property type="reaction ID" value="UER00162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004076">
        <property type="term" value="F:biotin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009102">
        <property type="term" value="P:biotin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01694">
        <property type="entry name" value="BioB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010722">
        <property type="entry name" value="BATS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002684">
        <property type="entry name" value="Biotin_synth/BioAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024177">
        <property type="entry name" value="Biotin_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22976">
        <property type="entry name" value="PTHR22976"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06968">
        <property type="entry name" value="BATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001619">
        <property type="entry name" value="Biotin_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00876">
        <property type="entry name" value="BATS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00433">
        <property type="entry name" value="bioB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12 13" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4 12 13" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9 12" id="KW-0093">Biotin biosynthesis</keyword>
    <keyword evidence="10 12 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12 13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 12 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12 13" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 12 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="14">
        <location>
            <begin position="50"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12 13">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12 13">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12 13">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12 13">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12 13">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12 13">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR001619-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="KFM19972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="325" mass="36160" checksum="D6633EC36D526DAA" modified="2014-10-29" version="1">MSALEFIKECQEKVFSGNHISTKDAEKLLNIPEEYLPDLAKCANEITRDFNGEKVDVEQLNNIKKNACSEDCTFCGQSAFFDTGIETYQLPSPEEVVSKAQKAKDEGAESYCLVAAWREPSKNDFEKVCKIITEINDKVGISVECSLGFLTQEQAKKLKELKVKRYNHNLETAKSKFPEICTTHTYEDRLKTLGIARDAGLELCTGGIIGLGETREQRLELTLELARLFPEEVTINILVPVPGTPLELQTDLPNSEIVRMFSVIRFLLPESVIKISGGRETQLEDSGEELLQSGANGIITSGYLTMGGNEAQKDRKMIEKIGLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P5</accession>
    <name>A0A087S2P5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00303</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19999">
        <property type="protein sequence ID" value="KFM19999"/>
        <property type="gene ID" value="AAA799P11_00303"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.297"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="88" mass="10031" checksum="862BD45AF4877AED" modified="2014-10-29" version="1">MLTEREIAIYALGKTEGVHSIAETLGKGLDDEKYIESWNKTMKLLGIELPLKELEKIYKEFAEKMEQAVDESESKNKGDIGKKTQKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P7</accession>
    <name>A0A087S2P7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20001">
        <property type="protein sequence ID" value="KFM20001"/>
        <property type="gene ID" value="AAA799P11_00305"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="79" mass="8968" checksum="1082FF88A8EF2AA9" modified="2014-10-29" version="1">MQIGYSSVSVLALGEFSLRRRIIRISVNYPMLSEQTFAQEPSQKSTFWNDATKYASASKDEPFVEEVAYMMVTLHRTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q2</accession>
    <name>A0A087S2Q2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00310</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20006">
        <property type="protein sequence ID" value="KFM20006"/>
        <property type="gene ID" value="AAA799P11_00310"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="67" mass="7911" checksum="D9980D0D9E7C08BD" modified="2014-10-29" version="1">MSSELLIEKLLEQRDSYLHILKHLEFSLSLDPSIDEKPNIEKLQTKTIEQLKKIEQEIAHILSKDIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R5</accession>
    <name>A0A087S2R5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00324</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20019">
        <property type="protein sequence ID" value="KFM20019"/>
        <property type="gene ID" value="AAA799P11_00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="87" mass="9015" checksum="48DF5B0EC0ED0837" modified="2014-10-29" version="1">MDFGSILGIVVMVVGVIIGLIIYNAFSDALDCSTLTGYDATTPANSTAQAKACLETKSNANVVFGIIPVFIILGLIPLIRGALTRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R6</accession>
    <name>A0A087S2R6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20020">
        <property type="protein sequence ID" value="KFM20020"/>
        <property type="gene ID" value="AAA799P11_00325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="86" mass="10182" checksum="6C2ACF6EA55583FD" modified="2014-10-29" version="1">MIEVMIQLRLANVGISLQSRNNLIERKSELTYSEFIKRLCVLYDYCKENHNQTFELLFNDMKKKEKKNSSLSNGFGQDTKNEWSND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y2</accession>
    <name>A0A087S2Y2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mevalonate kinase protein</fullName>
            <ecNumber evidence="2">2.7.1.168</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mvk</name>
        <name evidence="2" type="ORF">AAA799P11_00157</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.168" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20086">
        <property type="protein sequence ID" value="KFM20086"/>
        <property type="gene ID" value="AAA799P11_00157"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.156"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001174">
        <property type="entry name" value="Galkinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014606">
        <property type="entry name" value="Heptose_7-P_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036406">
        <property type="entry name" value="Hept_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00960">
        <property type="entry name" value="LMBPPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GHMP_kinases_C" evidence="1">
        <location>
            <begin position="235"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="336" mass="37463" checksum="06219AAC7AF4F202" modified="2014-10-29" version="1">MLVGRAPLRISFSGGGTDLEEYHKKYDGYSVSYTINSYTYVIAKLRRDDKLQGFSPDFASHLTPKKYSSTKILQGHEIIIVGLEYMKFKKGIDMYLTSDVEPNSGLGASSSLTTNFVNVISYLQGKKRNPNEIAMKAYKIGHDILKWGIGKQDEFAAAFGGLNLYKYSKDKVSVKPINLKKSTLKELQERSLLFHLGDREHSKGILQSQINAINKSKKITLSSLHKAKELALEMHDALKEDDLTKFSDILNRGWKAKQGYTKGVSNPRIDKISKKAIEKGAEALKVTGAGGGGHFFVVANPSKHKSIINSLKKLGVHNVQFKYQNEGSKVFEINNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y9</accession>
    <name>A0A087S2Y9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase protein</fullName>
            <ecNumber evidence="2">2.6.1.87</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arnB</name>
        <name evidence="2" type="ORF">AAA799P11_00164</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DegT/DnrJ/EryC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.87" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20093">
        <property type="protein sequence ID" value="KFM20093"/>
        <property type="gene ID" value="AAA799P11_00164"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099620">
        <property type="term" value="F:UDP-4-amino-4-deoxy-L-arabinose aminotransferase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00616">
        <property type="entry name" value="AHBA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000653">
        <property type="entry name" value="DegT/StrS_aminotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30244">
        <property type="entry name" value="PTHR30244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01041">
        <property type="entry name" value="DegT_DnrJ_EryC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000390">
        <property type="entry name" value="PLP_StrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="387" mass="43562" checksum="CFBCA060C3640963" modified="2014-10-29" version="1">MDPKWTSGNELEYLKSVLSNSKDVKENPFTLRLEEAFCKKYGVKYAIAINSGTSGLHAALIAAGVQPGDEVITTPFTVLVDSSVPVIMGAKPVFADIEKDTHNIDPDSIEKVITEKTKAIIPVSHDGLPYDIDNVKKIADEHDLIVVEDNAQAMLAEYKGRLVGQDAHITMFSFERTKHVSCGEGGMLITNNEELATKARKFAGMGFKNLSASASDLVAGVPLEYQTPNYERNDEVGLNYRFNEFLAAITLAQFERVDELVQIRRDIAKLYDKIFAGTKFIPQKVPEGYVSSYFTYAVESPYSDITQWKKFHDYHIENGGDDFYAAMILGYEEPIMKKLGYYEKYKGKCPVAEEIQPKMMQFKTNYRTIDEAQEQIEKLKTSLENFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S327</accession>
    <name>A0A087S327_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sulfur carrier protein ThiS adenylyltransferase</fullName>
            <ecNumber evidence="2">2.7.7.73</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">thiF</name>
        <name evidence="2" type="ORF">AAA799P11_00202</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.73" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20131">
        <property type="protein sequence ID" value="KFM20131"/>
        <property type="gene ID" value="AAA799P11_00202"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.201"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008641">
        <property type="term" value="F:ubiquitin-like modifier activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953">
        <property type="entry name" value="PTHR10953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="SSF54285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="SSF69572"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ThiF" evidence="1">
        <location>
            <begin position="104"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="443" mass="47835" checksum="5DD9879A11241AEE" modified="2014-10-29" version="1">MANIIFTIPSVLNQGGGEKKVEVSAESLQDAFAKISESMGDDFKRRVLEGDGTPRSLINIYINGKNAKFSDGLNTVLKDNDEVYILPAVAGGSEELSKKELDKFSRQVMLEEIGYNGQLKLKNSKICVVGTGGLGNPITSRLAAMGVGTLRIVDRDVIELSNLHRQTMFDEDDVGQVKVEVAAKKLQKLNPDCKIEALAVSVNDYTALEVVEGCDVVVDALDSVNARYALNKACVKFGIPFVTGAAVGVSGQIFTILPGTSACYHCMFPALDEDTMPTCSIEGVHPSILSIVGGIEVAEAVKVVMGKKPSLSEKILHVDIENLDFTSTRTFRAEECPVCGTGKSEEIVKEELLLEELCGRNRGKRTFSITPTSTFDLDVPKVTSIAKEKGFIVENQGELGLSMRTNDLSVSFMKKGSAVVVGPNDEQSAIELYNELLGKKVIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S336</accession>
    <name>A0A087S336_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Histidinol-phosphate aminotransferase protein</fullName>
            <ecNumber evidence="5">2.6.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hisC</name>
        <name evidence="5" type="ORF">AAA799P11_00211</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.9" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20140">
        <property type="protein sequence ID" value="KFM20140"/>
        <property type="gene ID" value="AAA799P11_00211"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.210"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004400">
        <property type="term" value="F:histidinol-phosphate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001917">
        <property type="entry name" value="Aminotrans_II_pyridoxalP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005861">
        <property type="entry name" value="HisP_aminotrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01141">
        <property type="entry name" value="hisC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00599">
        <property type="entry name" value="AA_TRANSFER_CLASS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="4">
        <location>
            <begin position="45"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="356" mass="40146" checksum="33A3ACE93C77A693" modified="2014-10-29" version="1">MKNSWYEKKLEEYAKLGGYKKPEKFDDVLKLDSNENFVINKKFQQDVISYAKSNSDVREYPLGGVEKLVSKLSKYLKVPENMIGVGNGSDQILDLFLANMASKKTKILTSDPTFGFFEERCKLYAIPCTKIPFSSDMKLDIEKFNSNLKKCQILYLDSPNNPTGFQFSKTQLESLIKKFDGLVIIDEAYGEFGDSTTVSLTKKYDNLIVVKTFSKAFGLAGLRLGYFVANKKIVEVFNQVLQYPYPLNTLAIEAGIASLDKVDQMKEASEIIKSERKKIIENLRKYDAFTVFDSNANFVLFDAKGVDKRVFSALVEQGISIRKLGKIGTHSGCLRVTVGTKEMNSKFLLAIRDLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S356</accession>
    <name>A0A087S356_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative succinate-semialdehyde dehydrogenase NADP protein</fullName>
            <ecNumber evidence="3">1.2.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gabD</name>
        <name evidence="3" type="ORF">AAA799P11_00236</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.16" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20160">
        <property type="protein sequence ID" value="KFM20160"/>
        <property type="gene ID" value="AAA799P11_00236"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.230"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004030">
        <property type="term" value="F:aldehyde dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009013">
        <property type="term" value="F:succinate-semialdehyde dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07100">
        <property type="entry name" value="ALDH_SSADH1_GabD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044148">
        <property type="entry name" value="ALDH_GabD1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="2">
        <location>
            <begin position="3"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="463" mass="50737" checksum="A10CE303797E7920" modified="2014-10-29" version="1">MSQITTVNPATGEDITTFSAMGKDQVSELVRKAKRAFPEWKKDYEKRRSYIYNLVEHLKKNKTELAKIATSEMGKALKESIGEVEKCAWALEFYADHGDSFLSDEVLNTDARKSFLTFEPLGVIGSIMPWNFPYWQALRFAAPCLMAGNVIVMKPSRVTMQSGIEIEKAFAEAGIPEGVFSTVVGSVDSANHLIDSEVNAVTFTGSTNAGAKVGERAAMNLKKCVLELGGSDPFIVLDDAIIEKAAEGAVKGRFINCGQSCVASKRFFVGKNIAEDFIELFIKKASQLKVGDPMSIDTDVGPLSSKDGLETISGIVEDAKAKGAEVLLGGEEMDRNGYFYKPTILTNITSDMRIAQEETFGPVAPITIVENESDAIKMANDSEFGLGASIWTKDLAKADKMSRRIESGIVSVNNVVISDPRIPFGGIKHSGFGRELSRYGMLEFVNLKSVRFYDNLTHHHYVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S365</accession>
    <name>A0A087S365_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Riboflavin synthase protein</fullName>
            <ecNumber evidence="4">2.5.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ribE</name>
        <name evidence="4" type="ORF">AAA799P11_00245</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.9" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20169">
        <property type="protein sequence ID" value="KFM20169"/>
        <property type="gene ID" value="AAA799P11_00245"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.239"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004746">
        <property type="term" value="F:riboflavin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00402">
        <property type="entry name" value="Riboflavin_synthase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023366">
        <property type="entry name" value="ATP_synth_asu-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001783">
        <property type="entry name" value="Lumazine-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026017">
        <property type="entry name" value="Lumazine-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21098">
        <property type="entry name" value="PTHR21098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00677">
        <property type="entry name" value="Lum_binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000498">
        <property type="entry name" value="Riboflavin_syn_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00187">
        <property type="entry name" value="ribE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51177">
        <property type="entry name" value="LUMAZINE_BIND"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lumazine-binding" evidence="3">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="repeat" description="Lumazine-binding" evidence="2">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="domain" description="Lumazine-binding" evidence="3">
        <location>
            <begin position="100"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="repeat" description="Lumazine-binding" evidence="2">
        <location>
            <begin position="100"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="194" mass="21108" checksum="960EE471416D6AA9" modified="2014-10-29" version="1">MFTGIVEGIGKVEKISKNTKNRSAVQMTVNLGKHAKGLKVGQSVALNGVCLTATKLSKSNCIFEMIEETTKKTDLGNLEVGGIVNIERSLKAGDRLEGHFVLGHVDGVGIIKKILRKPKEVQVWFEVPKKLAKYVVKKGSIAVDGISLTVTDIKKNLASVSLIPHTIEVTNFQTKKVGDKVNIETDILGKYILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S371</accession>
    <name>A0A087S371_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crotonyl-CoA reductase protein</fullName>
            <ecNumber evidence="2">1.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccr</name>
        <name evidence="2" type="ORF">AAA799P11_00251</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20175">
        <property type="protein sequence ID" value="KFM20175"/>
        <property type="gene ID" value="AAA799P11_00251"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.245"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="17"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="358" mass="39070" checksum="DBC5D57C8D64C8B6" modified="2014-10-29" version="1">MKAVVYNEYAPDDNYAKILKVQDIDEPKPKPDEVIFTNKASALNYNDIWGMRGVPVAVPLPHVSGSDVAGEVIAVGEDVQNFKVGDRVVSHSNLACRVCKACTDGREFDCTRRQVWGFQTGPLWGAYSEQIHLPEVNVSKIPDSVSFEDAAAASMTLLTSWHMLVGRAKITPGQTVLVMGGGSGVGSFAIQIAKLYNCDVIATASPDKLDKCKELGADYAVDHRKDDWQKEVFKISKELAKTKGEAPGIDIAFDHIGQTHFNKQLTLLKYGATLVSCGATTGYDAQIDLRHIFFKGINVLGSTQGTKAELDQGLYWMGQGKLKSIVDSVYTFEQAAEAHTKMLEGKFFGKILMKPEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F9</accession>
    <name>A0A087S3F9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20263">
        <property type="protein sequence ID" value="KFM20263"/>
        <property type="gene ID" value="AAA799P11_00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="80"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="170" mass="19993" checksum="3C84A38689EC1D61" modified="2014-10-29" version="1">MIRGEIRNNQILDLIQKNPGLNFCDIMRITGFKNGVLSYYVKKLEKNNMVHVIRKTGNTRFFPLEINEHESVLLEMLRRPTPCEIILLLENNPEGLSVSQIIQYTKKAQSTISIYLQLLLSRNVTMIKFHSRKKIIVLKDIEHVRTTLQKYNFKPIKKTIQNFNDMFESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G5</accession>
    <name>A0A087S3G5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Na antiporter NhaA 2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">nhaA2</name>
        <name evidence="4" type="ORF">AAA799P11_00016</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20269">
        <property type="protein sequence ID" value="KFM20269"/>
        <property type="gene ID" value="AAA799P11_00016"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.16"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="44"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="244" mass="27528" checksum="60D912CF21346960" modified="2014-10-29" version="1">MNILDTAKNNKTVIVASIVLVIAITLYFTEIELKDNSNSEEVNNLEADTAPEIKISKGDDPMLGDPNAPLSIIEFSDYQCPFCARFYVQTLPLLKSWYIETGEVNFVYRDFPIPNHPNAMPAAVASECADDQGKFWEYHDILFIKQDTWKKLEGMDAITAFKEYALELNLDAESFDSCFDSGKYVEEVNQDLSEGRSYKISGTPTFFIGNEEIGYSSMFGAKSFSDFQTIIEEKQSEIKMDDVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G6</accession>
    <name>A0A087S3G6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00017</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20270">
        <property type="protein sequence ID" value="KFM20270"/>
        <property type="gene ID" value="AAA799P11_00017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="71" mass="8572" checksum="F0BE247A6B87E920" modified="2014-10-29" version="1">MVCKNICVDYKAKKPKNSQRYLSGQKRCFVCDIFMKWEGLRCPCCGNRLRVKPRTTKYREQYRIAKNIRHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H7</accession>
    <name>A0A087S3H7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptide chain release factor subunit 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">prf1</name>
        <name evidence="2" type="ORF">AAA799P11_00028</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20281">
        <property type="protein sequence ID" value="KFM20281"/>
        <property type="gene ID" value="AAA799P11_00028"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.28"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003747">
        <property type="term" value="F:translation release factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042226">
        <property type="entry name" value="eFR1_2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005141">
        <property type="entry name" value="eRF1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004403">
        <property type="entry name" value="Peptide_chain-rel_eRF1/aRF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10113">
        <property type="entry name" value="PTHR10113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03464">
        <property type="entry name" value="eRF1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eRF1_2" evidence="1">
        <location>
            <begin position="135"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="352" mass="40476" checksum="BBBA91205B0D67EE" modified="2014-10-29" version="1">MKNNLESSEISSSEWLSLNQFLHEIKQIDSSCVSIYYPYGKGHETISLLQETKRNESFEKIESKIESKIAELKKNPISVGKFTKTLCIFGWIKNGKVNVKVIGTSKKLPYVYVASKKPFIKPFNDILKTNYAVLLVTLDQKSAIIQKFHGSQIIQEAKLRIDLQGRHKKGGQSQGRFLRARQTKIHVFFKKVANKVRMMDSDSELLLLGGIGPAKTEFYDELDSELVKKCRFVESVSFSTPKNDIDKKIIHHLYRHRRKYVTEIIEKYENLVKEGLTAKRNNIIFKALEIGAVDTLIISANYHTTLQFKNIMKMMEIAKNTSAKIEFVVSPKIIKKLEIDDSVLAILRYRIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H9</accession>
    <name>A0A087S3H9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ATP-dependent RNA helicase DeaD protein</fullName>
            <ecNumber evidence="10">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">deaD</name>
        <name evidence="10" type="ORF">AAA799P11_00030</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20283">
        <property type="protein sequence ID" value="KFM20283"/>
        <property type="gene ID" value="AAA799P11_00030"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.30"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="9">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="33"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="8">
        <location>
            <begin position="229"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="375"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="386"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="407"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM20283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="439" mass="49067" checksum="B600B405BBF99911" modified="2014-10-29" version="1">MTKFQELGLKEEILKGINDLGFEEAFPIQEAVIPVLLTGRDVVGQAHTGSGKTAAFSLSMLQEIQPKNGIQGLIMAPTRELAMQITDEIKKFGKYTGIRVATVYGGQGMGLQLDALERGVEIVVATPGRLIDHLKRGSIELRDVSHIVLDEADTMLDMGFIDDIQFILDLAPEDRVMSLFSATMPTEILRLSEEYLKNPKQFLLDADDLSGEGIDQSYLVIKDRDKFKYLIDFIKPVKGQSIVFCSTKYRTRDVAKFLHQEKFDAVAIEGDMSQHRREQSMGKFRSGKADILVATDVASRGIDVPRVELVINYDVPNQEMAYFHRIGRTARAGAKGKAVTFVSYSSVGDWNIIKRQIKVPIKDLNEEMGIEIAIPDPLKRQMPSRRYGGQSRSNYSRGGRSGGYGRSGGRRDSRDSRGGRRRYNDRGGSKNSYGGRSRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J3</accession>
    <name>A0A087S3J3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00044</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20297">
        <property type="protein sequence ID" value="KFM20297"/>
        <property type="gene ID" value="AAA799P11_00044"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.43"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="163" mass="18617" checksum="BCB141D192954EA4" modified="2014-10-29" version="1">MSIQILQYEFLGPIPLDEWGPPMEKLVFLIMSRDKDRFNIVYVGDCEKTDDKSYFVQHTGFKCWVEKSGSEKSLYLAILPLFDASNEHRESVLNKIKVRYNPPCNVGEIVEPKPDYVVRKSADSSEKFLCPCCGSEMKVEQILEKSTLYRCSSCGISDTKPNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J6</accession>
    <name>A0A087S3J6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00047</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20300">
        <property type="protein sequence ID" value="KFM20300"/>
        <property type="gene ID" value="AAA799P11_00047"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="132"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="166" mass="17339" checksum="13BFDC7FA04201AD" modified="2014-10-29" version="1">MGLVCVGAFSGLAYAASITAPDVPRFGDAGSDNVITSAERSSFQIIFNFTDDAALNVGDRIYLLNGTDALAANFTTPIFRTGTQAEINQNSINFTNTDDLSDLGDGNYILRGQWVDVDGGGQAGAQGNEASTLTLDSDTTPTVTITSNPSSPSGTKTSLTFNFEFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K3</accession>
    <name>A0A087S3K3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminoacyl-tRNA hydrolase</fullName>
            <ecNumber evidence="1">3.1.1.29</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pth</name>
        <name evidence="4" type="ORF">AAA799P11_00054</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>an N-acyl-L-alpha-aminoacyl-tRNA + H2O = a tRNA + an N-acyl-L-amino acid + H(+)</text>
            <dbReference type="Rhea" id="RHEA:54448"/>
            <dbReference type="Rhea" id="RHEA-COMP:10123"/>
            <dbReference type="Rhea" id="RHEA-COMP:13883"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:59874"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:138191"/>
            <dbReference type="EC" id="3.1.1.29"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.29" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20307">
        <property type="protein sequence ID" value="KFM20307"/>
        <property type="gene ID" value="AAA799P11_00054"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.52"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004045">
        <property type="term" value="F:aminoacyl-tRNA hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02430">
        <property type="entry name" value="PTH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023476">
        <property type="entry name" value="Pep_tRNA_hydro_II_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002833">
        <property type="entry name" value="PTH2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12649">
        <property type="entry name" value="PTHR12649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01981">
        <property type="entry name" value="PTH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102462">
        <property type="entry name" value="SSF102462"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00283">
        <property type="entry name" value="arch_pth2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00033690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="117" mass="12787" checksum="A18AF01EDAE4825F" modified="2014-10-29" version="1">MGDIKQVIVVRTDLEMGKGKIAAQVGHACVLGAEHVRKSHPEWYEQWWGGQEKVVVKVSGIKDLQEVKKHAIDLNLPWSEVTDAGHTQIAPGTTTCISIGPAPENLIDRVTGDLKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M8</accession>
    <name>A0A087S3M8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00079</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20332">
        <property type="protein sequence ID" value="KFM20332"/>
        <property type="gene ID" value="AAA799P11_00079"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.76"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="98" mass="11435" checksum="0A4E853600BF3AB7" modified="2014-10-29" version="1">MAIPIRNTVFDKIRDAGSLTDVELYKVLTKDGFTMAEAKFNKILLDLEILGLIKVSWITKDERRIEVFVEKEEVDEVDEQNKEMMEKDYEASFPGFEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N4</accession>
    <name>A0A087S3N4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inosine-5'-monophosphate dehydrogenase protein</fullName>
            <ecNumber evidence="3">1.1.1.205</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">guaB</name>
        <name evidence="3" type="ORF">AAA799P11_00085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20338">
        <property type="protein sequence ID" value="KFM20338"/>
        <property type="gene ID" value="AAA799P11_00085"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.82"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="13"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="77"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="153" mass="16644" checksum="DE9B2958932B94D2" modified="2014-10-29" version="1">MSDGKTMTIADIMTKSVVSVDSTMNVNEAAKMMEDAKVGAIIVMENNTPVGIVTDRDFSAKIVAHAYPITTPVKQIMSSPMFSVGSDDSVRSAADLMHERGIRKLPVIDNDVVVGIITASDIVNLLAVSTEDDIRDIYFHSVVKIFTNYSPYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P5</accession>
    <name>A0A087S3P5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Transcription elongation factor Spt4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spt4</name>
        <name evidence="4" type="ORF">AAA799P11_00096</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Stimulates transcription elongation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Heterodimer composed of Spt4 and Spt5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the archaeal Spt4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20349">
        <property type="protein sequence ID" value="KFM20349"/>
        <property type="gene ID" value="AAA799P11_00096"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.93"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00949">
        <property type="entry name" value="Spt4_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029040">
        <property type="entry name" value="RPABC4/Spt4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022800">
        <property type="entry name" value="Spt4/RpoE2_Znf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007178">
        <property type="entry name" value="Spt4_arch"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038589">
        <property type="entry name" value="Spt4_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40704">
        <property type="entry name" value="PTHR40704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06093">
        <property type="entry name" value="Spt4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01389">
        <property type="entry name" value="Spt4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63393">
        <property type="entry name" value="SSF63393"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Spt4" evidence="3">
        <location>
            <begin position="4"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="7"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="19"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="22"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="62" mass="6735" checksum="19C8BC19428D3567" modified="2014-10-29" version="1">MAREMACRKCKYVTVGKVCPVCKSSDLTPDWSGVVLVVDPTNSEISKTLGITQKGKYAIKVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q2</accession>
    <name>A0A087S3Q2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF87 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00103</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_012215626.1">
        <property type="nucleotide sequence ID" value="NC_010085.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20356">
        <property type="protein sequence ID" value="KFM20356"/>
        <property type="gene ID" value="AAA799P11_00103"/>
    </dbReference>
    <dbReference type="GeneID" id="5773225"/>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.100"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008571">
        <property type="entry name" value="HerA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002789">
        <property type="entry name" value="HerA_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42957">
        <property type="entry name" value="PTHR42957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01935">
        <property type="entry name" value="DUF87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF87" evidence="1">
        <location>
            <begin position="128"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="510" mass="56900" checksum="1F67FAF70568A8CE" modified="2014-10-29" version="1">MSLGFVIGESKPTFVTAITSRALSVGEYIKIGSDEGEILGLVEKSSVTSAAFTDVRNFDEAAESTEIAELNKRDKTFTAHIGILGFLENLRKGQSIIPAIPPIPGTEITQPSKQDLEEIFSPKNDGWVKIGNLLRNKTIDAKVNLDKIVSRHLGILAMTGMGKSNLVSLVTKQISKLKGTVIIFDYHNDYTTLNIPRINVVDAKINPRLLDADQLSEVLEIRDGANVQQRVLRMAFTKHVKESKEFWSKLENEIDFIVNSEDKKLKEIRTSAYRVQDIIEEAQKRFEDILDPDMGDPISFIKEGRTNVLNISELSEKQANVAVAFYLQQLLKDRKDASIARHGKSKRERNYRFNSPIFVIIEEAHVFIPKDHDTSAKYWAAKIAREGRKFGLGLGVVSQRPRSVDLNVLSQMGSFAIMKIIQEDDQRQIASATESTSRELIAQLTSLNVGDAVLVGQWTNLPSLVHVEEVKEKIMGADQSAVNAWANAEKMKEVAVESTQGLVQKDLLLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q4</accession>
    <name>A0A087S3Q4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA double-strand break repair Rad50 ATPase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rad50</name>
        <name evidence="3" type="ORF">AAA799P11_00105</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20358">
        <property type="protein sequence ID" value="KFM20358"/>
        <property type="gene ID" value="AAA799P11_00105"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.102"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038729">
        <property type="entry name" value="Rad50/SbcC_AAA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13476">
        <property type="entry name" value="AAA_23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_23" evidence="2">
        <location>
            <begin position="4"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="197"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="358"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="693" mass="78274" checksum="A7599DB5C65E68F2" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q7</accession>
    <name>A0A087S3Q7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation initiation phosphotransferase F protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">spo0F</name>
        <name evidence="2" type="ORF">AAA799P11_00108</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20361">
        <property type="protein sequence ID" value="KFM20361"/>
        <property type="gene ID" value="AAA799P11_00108"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.106"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Response regulatory" evidence="1">
        <location>
            <begin position="6"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="124" mass="14269" checksum="514FCCD7BEE107AD" modified="2014-10-29" version="1">MEKTIKILLVDDDSDYLEVTQLMLMDEGYDVIPATNGEDGVVKYKDSKPDIVFLDIKMPGIDGYETFFRIKKIDSDARVVFASSYALENEKYKKTKDMNLCGIINKPAEFDEYEKMIKKFAKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S2</accession>
    <name>A0A087S3S2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell division protein FtsZ 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ftsZ1</name>
        <name evidence="2" type="ORF">AAA799P11_00123</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20376">
        <property type="protein sequence ID" value="KFM20376"/>
        <property type="gene ID" value="AAA799P11_00123"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.121"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1440">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045061">
        <property type="entry name" value="FtsZ/CetZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036525">
        <property type="entry name" value="Tubulin/FtsZ_GTPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003008">
        <property type="entry name" value="Tubulin_FtsZ_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30314">
        <property type="entry name" value="PTHR30314"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00091">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00864">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52490">
        <property type="entry name" value="SSF52490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tubulin" evidence="1">
        <location>
            <begin position="8"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="316" mass="34043" checksum="069AE186B6BE5D38" modified="2014-10-29" version="1">MSFQVKEPVLVIGLGGAGSKLAIKAKDSLNSDCLLISNDSKDFIEEIPSVHVSTDSVVNPSMQLIRGSTYNVSEEIKSKISGYSTVVMMSNLAGKAGSAIAPIVSDMCKEADTGLISFAIMPFKYEKDRIFNSGVSLKRVRENSECTVVLDNDSLLESNPDLTPKACYDIANSAIMHVVESLGASELSSETNILTTSKQGQDIEESLRDSLKMLYGNAPPNAVKRSMLYVVGGSNIPVGVLNSITNLTSGILNESNSQIDMTSESEESKVVMLSSIQGMTKFDNYDPLGMIPQEDTLDWSAPDCSIDCELDLPQLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RN25</accession>
    <name>A0A087RN25_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative ACR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01524</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000102">
        <property type="protein sequence ID" value="KFM14879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14879">
        <property type="protein sequence ID" value="KFM14879"/>
        <property type="gene ID" value="AAA799P11_01524"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1392"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.1140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003795">
        <property type="entry name" value="DUF192"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038695">
        <property type="entry name" value="Saro_0823-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37953">
        <property type="entry name" value="PTHR37953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02643">
        <property type="entry name" value="DUF192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="8514" checksum="2D0D3CDA13F56E61" modified="2014-10-29" version="1" fragment="single">WMLNMQFPLDMIWFDQDGKVVHIEENVPPCKTALEITTCQSVVPDEEATYILEVTSGFVVQNNITKDSILTIISI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNN1</accession>
    <name>A0A087RNN1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATPase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01514</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000094">
        <property type="protein sequence ID" value="KFM15085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15085">
        <property type="protein sequence ID" value="KFM15085"/>
        <property type="gene ID" value="AAA799P11_01514"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1390"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="80" mass="9071" checksum="618B289B4F4BC816" modified="2014-10-29" version="1" fragment="single">STITNDLPFTFSESKTALLLTVSREYTSMHADIFVDDKYVTSVRIGKKGQIKIPKRSTIAKNLMKLATSQNDIQIFLKDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQ92</accession>
    <name>A0A087RQ92_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nitrogen regulatory P-II protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01491</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000080">
        <property type="protein sequence ID" value="KFM15646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15646">
        <property type="protein sequence ID" value="KFM15646"/>
        <property type="gene ID" value="AAA799P11_01491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11486" checksum="5C6CF6A5C0EE026B" modified="2014-10-29" version="1" fragment="single">MKLYNVKLLTITCEILAQENIIEILKKHEITGYTTYEVDGNGARGLRGQGLKNEKNIKVEIIMREEKLQDVVEEISRTLFANYAIVLYVTDVGVLRPEKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQG4</accession>
    <name>A0A087RQG4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01482</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000076">
        <property type="protein sequence ID" value="KFM15718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15718">
        <property type="protein sequence ID" value="KFM15718"/>
        <property type="gene ID" value="AAA799P11_01482"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="30" mass="3195" checksum="643F8493E6586B34" modified="2014-10-29" version="1" fragment="single">MKSGDLFLIGLDLVKDKSVLESANNDSEGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQJ0</accession>
    <name>A0A087RQJ0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01478</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000074">
        <property type="protein sequence ID" value="KFM15744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15744">
        <property type="protein sequence ID" value="KFM15744"/>
        <property type="gene ID" value="AAA799P11_01478"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="83" mass="9120" checksum="DD916C1F8CED7FF1" modified="2014-10-29" version="1">MKGERNAVIIEIIPIRGNKKVLTAPISTPALTITIENSPLGAPRVNAERRDLPRFCLNKIFPIMFPPNFIPVATAINAIAIQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS98</accession>
    <name>A0A087RS98_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spondin N domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000054">
        <property type="protein sequence ID" value="KFM16352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16352">
        <property type="protein sequence ID" value="KFM16352"/>
        <property type="gene ID" value="AAA799P11_01440"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1361"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009465">
        <property type="entry name" value="Spondin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038678">
        <property type="entry name" value="Spondin_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06468">
        <property type="entry name" value="Spond_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Spondin" evidence="1">
        <location>
            <begin position="33"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="222" mass="23700" checksum="66C5172B338CEB6A" modified="2014-10-29" version="1" fragment="single">VGIPESDAAKSQMYEVTITNLTPGQPITPPLLVTHSADAGFFTLGEMASYELQQLAENGNTEPLVEMLQGKTGVLDIVQGTTPLVPANDPGKTGLNYSETFTVSAEGNMRYLSFASMLVCTNDGFVGIDSVKLPFYKQKTVYVSAFDARTEMNTEDFADIPPPCQGAIGITSSDEGTGTSNPILSEDGVVIPHPGIIGDEDLQRNVHAWGNTAVKIDIVRMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSF1</accession>
    <name>A0A087RSF1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NFACT-R_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01436</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000052">
        <property type="protein sequence ID" value="KFM16405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16405">
        <property type="protein sequence ID" value="KFM16405"/>
        <property type="gene ID" value="AAA799P11_01436"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1358"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008532">
        <property type="entry name" value="NFACT_RNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05670">
        <property type="entry name" value="NFACT-R_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NFACT-R_1" evidence="2">
        <location>
            <begin position="59"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="17"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="275" mass="30858" checksum="540247BC2C294246" modified="2014-10-29" version="1" fragment="single">SIASTLFNEAKKQSGAINSIEEIKAKTLKKLEKLQNKTESEECAVLVSEIRKKNWYERYRWFYTSDGFLVIGGRDTASNSAVVRKHLDKNDKIFHGDIFGSPFFIIKDAQNAPDTSMNEVAHATVCFSRAWREGMYGVSAYWVNPDQVKKSAPSGEFLPKGSFTIEGQRNFIKSGNLKLAVGIIPQEDGYALTCGPPETIKKNSICYAMIEPQGIEMVDAAKKIRIEFSKIHEEITKKISIDEFVRVMPAGKSQVKDVSRGEADVQKFIDTEEND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSG0</accession>
    <name>A0A087RSG0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nitrogen regulatory protein P-II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01433</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000051">
        <property type="protein sequence ID" value="KFM16414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16414">
        <property type="protein sequence ID" value="KFM16414"/>
        <property type="gene ID" value="AAA799P11_01433"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="12518" checksum="04E02C05044EA6B5" modified="2014-10-29" version="1" fragment="single">MKKIEAVIKRKNFPTIKSQLHLVGTYIIDKRNLEDSNIYDASKGSRVGSTGLKSIPLAKIEMVVPDKDARRVVDMISKNSGLTANHGGKIFVSEMDEVVDMETNDATQDLELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSG1</accession>
    <name>A0A087RSG1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01434</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000051">
        <property type="protein sequence ID" value="KFM16415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16415">
        <property type="protein sequence ID" value="KFM16415"/>
        <property type="gene ID" value="AAA799P11_01434"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1356"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="115" mass="13571" checksum="35AE1AEC154F131A" modified="2014-10-29" version="1">MMRARLTYVPLEVAEQFEDFIIKRDEEILGAVKARTRDYSTLSLLKLLYQLRGNPMTFSELYSKSKIRMKKSFLNYLHLCVDYNFVKKEAVGSNMIYTITDKGHTMLNLFMQKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RU43</accession>
    <name>A0A087RU43_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">50S ribosomal protein L24e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rpl24e</name>
        <name evidence="5" type="ORF">AAA799P11_01394</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Binds to the 23S rRNA.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L14.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the eukaryotic ribosomal protein eL24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000039">
        <property type="protein sequence ID" value="KFM16997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_012214610.1">
        <property type="nucleotide sequence ID" value="NC_010085.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16997">
        <property type="protein sequence ID" value="KFM16997"/>
        <property type="gene ID" value="AAA799P11_01394"/>
    </dbReference>
    <dbReference type="GeneID" id="5773237"/>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1324"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00472">
        <property type="entry name" value="Ribosomal_L24e_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00773">
        <property type="entry name" value="Ribosomal_L24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038630">
        <property type="entry name" value="L24e/L24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023438">
        <property type="entry name" value="Ribosomal_L24e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000988">
        <property type="entry name" value="Ribosomal_L24e-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011017">
        <property type="entry name" value="TRASH_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10792">
        <property type="entry name" value="PTHR10792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01246">
        <property type="entry name" value="Ribosomal_L24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00746">
        <property type="entry name" value="TRASH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TRASH" evidence="4">
        <location>
            <begin position="8"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="3">
        <location>
            <begin position="8"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM16997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="66" mass="7519" checksum="F785A369EDF40E2C" modified="2014-10-29" version="1">MSLLVKPCNFCNRPVAKGSGTMLAKNDGTVLWFCSAKCKKNALELKRDPRKFKWTKKYVKGGIRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUD7</accession>
    <name>A0A087RUD7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01387</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000038">
        <property type="protein sequence ID" value="KFM17091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17091">
        <property type="protein sequence ID" value="KFM17091"/>
        <property type="gene ID" value="AAA799P11_01387"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="35" mass="4052" checksum="DD698F7147DE96EA" modified="2014-10-29" version="1">MIQCEYCTRGFIETANGLAEKTFHELLHEPEVVNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV88</accession>
    <name>A0A087RV88_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">tRNA-guanine transglycosylase protein</fullName>
            <ecNumber evidence="3">1.17.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01350</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.1.2" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17392">
        <property type="protein sequence ID" value="KFM17392"/>
        <property type="gene ID" value="AAA799P11_01350"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016763">
        <property type="term" value="F:pentosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.105">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036511">
        <property type="entry name" value="TGT-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004804">
        <property type="entry name" value="TgtA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002616">
        <property type="entry name" value="tRNA_ribo_trans-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01702">
        <property type="entry name" value="TGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51713">
        <property type="entry name" value="SSF51713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00432">
        <property type="entry name" value="arcsn_tRNA_tgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00449">
        <property type="entry name" value="tgt_general"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="338"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="domain" description="TGT" evidence="2">
        <location>
            <begin position="11"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="370" mass="41686" checksum="C0F3352B039DFB35" modified="2014-10-29" version="1" fragment="single">MFEISKTDLAGRIGKIETNHGKIETPAYVPVIHPVKQTIPSKKIKEIGFDLVITNAYITRNNYGEKAVKKGIHKIIDYDKGIMTDSGGYQVLEYGDVPVSPTEMANFEQGIMTDFAIPLDKPTGFGLPIKKAEAYVKHTLKVCKQTIEDSKDNGQIWIGPIQGGEHFDLVAKSTKGLIKMGYKMLALGSPVEFMESYEYRLLAQMIVAAKKQIPHNIPLHLFGAGHPLTIPFAVALGCDTFDSASYMLYAKQNRYITEDGTRDLSDIVVFPCNCEVCAKYAPDELRQLESTEKINQLAIHNLHAIKLEVDKVKQAIHEGRLWEYVIKKARAHPKLFEMLELLILMVMVFLIIWICVQHNLKHLTELMTLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV91</accession>
    <name>A0A087RV91_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">tRNA N6-adenosine threonylcarbamoyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.234</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">N6-L-threonylcarbamoyladenine synthase</fullName>
            <shortName evidence="7">t(6)A synthase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">t(6)A37 threonylcarbamoyladenosine biosynthesis protein Kae1</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">tRNA threonylcarbamoyladenosine biosynthesis protein Kae1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">kae1</name>
        <name evidence="9" type="ORF">AAA799P11_01353</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>adenosine(37) in tRNA + L-threonylcarbamoyladenylate = AMP + H(+) + N(6)-L-threonylcarbamoyladenosine(37) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:37059"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10163"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:73682"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74418"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.3.1.234"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="7">Binds 1 Fe(2+) ion per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the KAE1 / TsaD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.234" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17395">
        <property type="protein sequence ID" value="KFM17395"/>
        <property type="gene ID" value="AAA799P11_01353"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1290"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000408">
        <property type="term" value="C:EKC/KEOPS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061711">
        <property type="term" value="F:N(6)-L-threonylcarbamoyladenine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002949">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01446">
        <property type="entry name" value="Kae1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000905">
        <property type="entry name" value="Gcp-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017861">
        <property type="entry name" value="KAE1/TsaD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034680">
        <property type="entry name" value="Kae1_archaea_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017860">
        <property type="entry name" value="Peptidase_M22_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735">
        <property type="entry name" value="PTHR11735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735:SF14">
        <property type="entry name" value="PTHR11735:SF14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00814">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00789">
        <property type="entry name" value="OSIALOPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00329">
        <property type="entry name" value="gcp_kae1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01016">
        <property type="entry name" value="GLYCOPROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="5 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TsaD" evidence="8">
        <location>
            <begin position="37"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="125"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM17395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="319" mass="34873" checksum="E55825B11CC193B5" modified="2014-10-29" version="1">MLGLGIESTAHTFSCAVIEKKGKKGKILSDVRKIYRPADGEGIHPREASRHHIENSSLVLSECLDEANIKINDLDIVSYAVRVGAVVARSLASFYKIPIYPVNHALGHIELGKLLTGARNPLVLLVSGGHTMLLAFLNKQWRVFGETLDITLGQLLDQFGRSIGFASPCGKNIEELATTSSNYVTLPYSVKGNDVSFSGLLSATKSVAKKSKVDACYSIQETAFAMISEAVERALSFTRKKELMIVGGVAANKRLSEMLQDVCKRHGAKFYVVPLKYAGDCGSQICWTGLLESQIKKGVSLKDTFVTQSWRLDTVKVNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV97</accession>
    <name>A0A087RV97_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">tRNA-modifying protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01359</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17401">
        <property type="protein sequence ID" value="KFM17401"/>
        <property type="gene ID" value="AAA799P11_01359"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034556">
        <property type="entry name" value="tRNA_wybutosine-synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13930">
        <property type="entry name" value="PTHR13930"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM17401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="178" mass="20672" checksum="E6EF2AB730F218B0" modified="2014-10-29" version="1">MSCSGEVVEGEEQLIQIKPAISEQLKKAKYGVSDHSTVELCHWTKKSFKHEGSCYKHKFYGISTHRCMEFSPAGMHCENRCVYCWRPMEFYDSLEMKPEQVAEPEEILTKLMAERKKLINGYYGDSRNDKQRLDESLLPSHYAISLSGEPTMYPKLPELIKXXXXNQFFLLQMDKSQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWR0</accession>
    <name>A0A087RWR0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thrombospondin type 3 repeat-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01302</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000028">
        <property type="protein sequence ID" value="KFM17914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17914">
        <property type="protein sequence ID" value="KFM17914"/>
        <property type="gene ID" value="AAA799P11_01302"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1242"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1080.10">
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003367">
        <property type="entry name" value="Thrombospondin_3-like_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028974">
        <property type="entry name" value="TSP_type-3_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02412">
        <property type="entry name" value="TSP_3"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103647">
        <property type="entry name" value="SSF103647"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="689"/>
            <end position="713"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="689"/>
            <end position="707"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="713" mass="78350" checksum="31EC2FFB604276B0" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXD0</accession>
    <name>A0A087RXD0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01225</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000022">
        <property type="protein sequence ID" value="KFM18134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18134">
        <property type="protein sequence ID" value="KFM18134"/>
        <property type="gene ID" value="AAA799P11_01225"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1178"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023486">
        <property type="entry name" value="TFIIB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00782">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CYCLIN" evidence="5">
        <location>
            <begin position="97"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="CYCLIN" evidence="5">
        <location>
            <begin position="191"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="276" mass="30206" checksum="31C9AC908CBD8F1E" modified="2014-10-29" version="1">MQLMEKLLFKIARKWVADNGSERTFSDSTVNRSRTGDKISLARHDKGLSTVINHLNKDASGNPLSAPMKASVTQMRKWDSRSQSKDSTERNLKQAMVELLKIKEKLSLPDSIIERSAYIYRKALEKKLTRGRSISGMAAATMYATCRESGIPRSLNEVSSACNIRRGSLAINYRVLLKELELSMPIASSVSCISKIASGAELNEKTKRTAATLLKKAEDQGIVAGKDPMGMAAAALYLSCLITGQNVTQAVIAKAAGITEVTVRNRCKSIRPLLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXD4</accession>
    <name>A0A087RXD4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phage integrase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01229</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000022">
        <property type="protein sequence ID" value="KFM18138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18138">
        <property type="protein sequence ID" value="KFM18138"/>
        <property type="gene ID" value="AAA799P11_01229"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="237"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="445" mass="52427" checksum="42E7B2DB22302339" modified="2014-10-29" version="1">MNQTQRQVESFEEFCNLESMQELLLNLRGSKHKNSKPKSRLGLYSTQMVYANRLYNLHKWLSGRKFEFNNFVHTGENTFKNQRETVTIQGLEHVLRLYQNSFNSRRDFVLLLKKYLHDPTHNGKFASSMVVERSAIQAYFKWNESEIAISFDPKKRYKVKDSEDEEPSLSLEELMKMLTVGRPTLVQKAVILCKFQRGLDTATLVDRFNFEAWRQLVEYFGTEMYLKWDLSMCPVPIKLTRMKTDFSHTGFLDIDAVKAIQEYLKDEEEKKGRKMSTRKPLFVNQKNNLIDNHWVSRSFNRMAETAGIQTKLEGYSYKTKYSKDSHELRDLLESTLLDSGVRADVVEHVTGHKPKDSYEKQSKLFPASLRSEYVKASKRLNIFSNLSQNMKGDDEKESLRHQNELLQRELENERYNSHKEIQTMKENQEAIMAWIQRQSFAKKIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH6</accession>
    <name>A0A087RXH6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01206</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18180">
        <property type="protein sequence ID" value="KFM18180"/>
        <property type="gene ID" value="AAA799P11_01206"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="89" mass="10393" checksum="B066F872A78A78DE" modified="2014-10-29" version="1">MSAKHSEDISKLSSNEIKSKIQREGIWPQYTQRIKSLERTEKEFWNLFAQETDSARKRAILEDLVNLQPIIANCYDAAQKLLLPNKMEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH8</accession>
    <name>A0A087RXH8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Site-specific recombinase XerD DNA replication protein</fullName>
            <ecNumber evidence="4">3.2.1.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tnpA1</name>
        <name evidence="4" type="ORF">AAA799P11_01208</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18182">
        <property type="protein sequence ID" value="KFM18182"/>
        <property type="gene ID" value="AAA799P11_01208"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="143"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="390"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="432" mass="50297" checksum="B4D16F33C53B2BCA" modified="2014-10-29" version="1">MSKTQQIPETNQKENIHRRTQWISRYIEKQHKQLSSKNLETFLAYNNDMIVGSVSENTRYKNLSHFGLLTKMLQKDWVDVTESDLRELVAKIMIKHGENGKETGYSFVLKISLKAIVRFAKLGSRNKPEDGELQILKFIKSTKPKDKLTREDLPTDEEVQKILTVCADSSRDKAMISVHAEAGTRIGELLGMKIKDFTLDKNGGMIKVDGKTGVRPIRIVKSVPYLTRWLNDHPNKDNHNSPLWVYIHASDTFGEPINYAGFNSILQKRIRQAGITKRISSHLFRHKEITDLATKLTESESRMRHGWEKTSLMPSRYTHLNQENLDEKMLEIMGVKQEKKKEDELRECVYCKIRYPVETRFCDTCSRPLDVADAIQMEKEQEERTRALIMETLRQEHSNKSKNRANKENEKKIIEQQKEIEQLKKLIAMVRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN1</accession>
    <name>A0A087RXN1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">30S ribosomal protein S4e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">rps4e</name>
        <name evidence="10" type="ORF">AAA799P11_01152</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the eukaryotic ribosomal protein eS4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18235">
        <property type="protein sequence ID" value="KFM18235"/>
        <property type="gene ID" value="AAA799P11_01152"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1113"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.740">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00485">
        <property type="entry name" value="Ribosomal_S4e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000876">
        <property type="entry name" value="Ribosomal_S4e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013845">
        <property type="entry name" value="Ribosomal_S4e_central_region"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038237">
        <property type="entry name" value="Ribosomal_S4e_central_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013843">
        <property type="entry name" value="Ribosomal_S4e_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11581">
        <property type="entry name" value="PTHR11581"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00900">
        <property type="entry name" value="Ribosomal_S4e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08071">
        <property type="entry name" value="RS4NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="RS4NT" evidence="9">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_S4e" evidence="8">
        <location>
            <begin position="99"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="238" mass="26273" checksum="9038279C821D2C43" modified="2014-10-29" version="1">MVSISGSKKLKRQMAPQFWGIARKDKRFVITTRPGPHKKSHAVPTAVFLRDMLKIVTSLREAKTSIYSGKVKIDGVVRKSLHHAIGLMDVIELENVSDVYRLVPTDGKLLKPIKISDAEKTKKLVSVTSKTTINKGKMQIGFHDGRSTISDTKINVGDVCLMQVPDQKILEVIKLEAGNHGLVTRGVNAGQIGKIESIEEGTFILPKRVILSLGDRKIEIPADIIMPIGKEEPVIQLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN3</accession>
    <name>A0A087RXN3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">rps8</name>
        <name evidence="5" type="ORF">AAA799P11_01154</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="A0A087RXN3"/>
    <dbReference type="EnsemblBacteria" id="KFM18237">
        <property type="protein sequence ID" value="KFM18237"/>
        <property type="gene ID" value="AAA799P11_01154"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1116"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01302_A">
        <property type="entry name" value="Ribosomal_S8_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000630">
        <property type="entry name" value="Ribosomal_S8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035987">
        <property type="entry name" value="Ribosomal_S8_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11758">
        <property type="entry name" value="PTHR11758"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00410">
        <property type="entry name" value="Ribosomal_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56047">
        <property type="entry name" value="SSF56047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="14700" checksum="36567483BF5A2457" modified="2014-10-29" version="1">MPATNILANLFVTLYNNETRRKGECTILPTSKLGIEVLKTLQKDGYIGEFEHIDDKRGGKFKIKLLAKITKCGAISPRFKVKTDEFNNWEQQYLPAYDRGMLLVTTNQGVMSHHEATQKGIGGFLIGYVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN7</accession>
    <name>A0A087RXN7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01163</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18241">
        <property type="protein sequence ID" value="KFM18241"/>
        <property type="gene ID" value="AAA799P11_01163"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1120"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="8364" checksum="F5A3193B81E8BF66" modified="2014-10-29" version="1">MTYSERPRSNLWFLLPVFFGIIGGIIAYFILRNDDPKKAKNCLYVGIALMIAGLVFNAIIASLIPEFGPGFRVNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP4</accession>
    <name>A0A087RXP4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histone protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18248">
        <property type="protein sequence ID" value="KFM18248"/>
        <property type="gene ID" value="AAA799P11_01170"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1127"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="139" mass="15663" checksum="FBFA37D104FEB884" modified="2014-10-29" version="1">MAMSRAKRAEAAKKAARTRKRNAAKKAAEAAKKAASRKRKAARARNAAKKAAPKRRTAAKRKAAPKRRTAAKRRAAPKRKTAAKRKAAPKRKAATKRRAAPKRIKEKQLQRERQLLNVEPLQRERQLNVDVKLSMLTFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP6</accession>
    <name>A0A087RXP6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01172</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18250">
        <property type="protein sequence ID" value="KFM18250"/>
        <property type="gene ID" value="AAA799P11_01172"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1129"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="106" mass="12518" checksum="0974DF28C4C02C0B" modified="2014-10-29" version="1">MVRVFYSQKTEDLIEKMTLTNWRKQVQQELGQEHQDMSDNWKMCAIGERIKLEGKDLESIKDLSPEAIRLGYEFSVAMQEKDNQKALEIITKIEQLQTIWRDEVNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR2</accession>
    <name>A0A087RXR2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polyketide cyclase / dehydrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01188</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18266">
        <property type="protein sequence ID" value="KFM18266"/>
        <property type="gene ID" value="AAA799P11_01188"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1145"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="144" mass="16574" checksum="1B18671ED379E666" modified="2014-10-29" version="1">MPQFSFQKTSTSSRSNIYKIFSDYENYQKISPEFFPSIRIRSVRDNVAVVEEHLNLGDDELVIMAKHVTDEPVLHEVFVIGGDAKGTHIQEQFIETPDGTKILVDVDLKLKGKMKIGSMFSKNRYQQNYEEIVDNFIKIAEDLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ0</accession>
    <name>A0A087RXZ0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01119</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18344">
        <property type="protein sequence ID" value="KFM18344"/>
        <property type="gene ID" value="AAA799P11_01119"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1081"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="7"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="103"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="174" mass="19615" checksum="C3C841088A560DE8" modified="2014-10-29" version="1">MAKAYVLMSCDLGSEKELISKLNSISEISEARGTFGLYDILAKVESDDEEKIQRAVTGVIRKLPEIRSTMTLTRSECEELFKPADKLINTMLGKNTSQAYVVIHTEKGREYEVLRNLGHIPEVKEADVVFGYYDVLCKIETETHKSLEKVITKAIRSLPFIKTSITLNVIEEQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY44</accession>
    <name>A0A087RY44_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4398 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01111</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18398">
        <property type="protein sequence ID" value="KFM18398"/>
        <property type="gene ID" value="AAA799P11_01111"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1072"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025511">
        <property type="entry name" value="DUF4398"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14346">
        <property type="entry name" value="DUF4398"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4398" evidence="3">
        <location>
            <begin position="269"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="214"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="83"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="214"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="255"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="421" mass="48392" checksum="D525768FE381A24D" modified="2014-10-29" version="1">MKISMNLFVISVLVLGLLSSPIAFAQTSDDEPENVTIELEESISVTSNDSDTETEETETEETETDDAIKNLGQEVSRFVHESRELFEQQKEETKEVIAQCRKDMRNADPVDRESVREECKSNLEDIRESYKDLRETYQETFKEFRENMRVFIQESKGLPVSSTQRNAAIDNIESLSDGPEKRELLRELKQKMDEQLREEKQKLREALKAEREAQREALKAEREAQREADKAEREAQREADKAEREAQREELKDDVSEEASEELIEASEEITEAEIEINEAENDGKEVSVSLEKLTEAKELLALARDHFDSGDYHEAEELAEEAKDLASESHMKYLGKSVEDLDDTELEVEVEVEDGIAKIKVENNGDETTFETEWTNEQDIISQIATTTGLTLAEIEEVIEFEIEVIDDEEDDEEDDEEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF3</accession>
    <name>A0A087RYF3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Probable cobyric acid synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">cobQ</name>
        <name evidence="4" type="ORF">AAA799P11_01077</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CobB/CobQ family. CobQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18507">
        <property type="protein sequence ID" value="KFM18507"/>
        <property type="gene ID" value="AAA799P11_01077"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1039"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015420">
        <property type="term" value="F:ABC-type vitamin B12 transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00028">
        <property type="entry name" value="CobQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004459">
        <property type="entry name" value="CobQ_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21343:SF1">
        <property type="entry name" value="PTHR21343:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="3" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="279" mass="31021" checksum="9A252ED10D11155C" modified="2014-10-29" version="1">MKSLMIQGTSSGAGKSTLVAALCRIFEQKGYLVAPFKSQNMSNFGYATPDFEISRAQAIQAIAAKCPIEPDLNPIMLKPLGNYYSAVYLNGKYYKKMHAKDYYAKFVKSKGIKAATTSLSKLQKNYDLVILEGAGSPAEINLQKYDIANMQIAQKANASVLLVSDIDRGGSFASLIGTMALIERKYKKLVKGFVLNKFRGDVDVLKPGFRKIKQLTKIPILGTIPMTKIDLPEEDSLHVKAKQMRWTKNNISKIDKELDKLAKTVKNNLDIKAIEEMIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL6</accession>
    <name>A0A087RYL6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01057</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18570">
        <property type="protein sequence ID" value="KFM18570"/>
        <property type="gene ID" value="AAA799P11_01057"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1019"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="97" mass="11675" checksum="B1823927FED23DAF" modified="2014-10-29" version="1">MGEPDEIQKLIDDISFRKSNSKDYQKMNAEEIGKELRDVMKFEQESFKKIEEFEKTQDNPDLIKYAKMICKNTTQREITQIQEVYLEKIDEEYLKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ23</accession>
    <name>A0A087RZ23_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkaline phosphatase-like protein</fullName>
            <ecNumber evidence="2">3.1.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">apl</name>
        <name evidence="2" type="ORF">AAA799P11_01017</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18727">
        <property type="protein sequence ID" value="KFM18727"/>
        <property type="gene ID" value="AAA799P11_01017"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.983"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004035">
        <property type="term" value="F:alkaline phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="178" mass="19725" checksum="C7B0F51C7651528C" modified="2014-10-29" version="1">MEPFDSFLVFITEFLGDHLYQGIFLASLIETLVPPIPTLVVFPTAGFLASQQGIPLIGVVPMIILGAIGATIGTSSIYFIALKLGRAVLLRYLNYFKISEKKLVRVEDWFEKYGDKTVFLGRMVPVMREMISVPAGLLKMKIPKFFLYTFAGSCIWSTGTILSGYYFGEAMGLATSQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ25</accession>
    <name>A0A087RZ25_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01019</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18729">
        <property type="protein sequence ID" value="KFM18729"/>
        <property type="gene ID" value="AAA799P11_01019"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.985"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009409">
        <property type="entry name" value="DUF1059"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06348">
        <property type="entry name" value="DUF1059"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="59" mass="6428" checksum="67D83B7603619A52" modified="2014-10-29" version="1">MTKSISCSDAGKDCGWSASADTEEELMAKVTEHVLEEHKEIELNAESISSIKSLIKETS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ39</accession>
    <name>A0A087RZ39_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Branched-chain-amino-acid aminotransferase</fullName>
            <shortName evidence="5">BCAT</shortName>
            <ecNumber evidence="5">2.6.1.42</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">ilvE</name>
        <name evidence="6" type="ORF">AAA799P11_01038</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24801"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:35146"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:18321"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:17865"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57427"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24813"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 4/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 4/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.42" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18743">
        <property type="protein sequence ID" value="KFM18743"/>
        <property type="gene ID" value="AAA799P11_01038"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.999"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00058"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00073"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052656">
        <property type="term" value="F:L-isoleucine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052654">
        <property type="term" value="F:L-leucine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050048">
        <property type="term" value="F:L-leucine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052655">
        <property type="term" value="F:L-valine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01557">
        <property type="entry name" value="BCAT_beta_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005785">
        <property type="entry name" value="B_amino_transI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033939">
        <property type="entry name" value="BCAT_family"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01122">
        <property type="entry name" value="ilvE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 5 6" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="305" mass="34205" checksum="FAA33C90CE74A713" modified="2014-10-29" version="1">MNLPLSKYVWFDGKYVLTEKAHVPITTHAIHYGTSIFEGIRAYWNGKNLHVFRLDEHVKRFRRSGQFYNISLNFSDKEISDAIIGICKKNKLKKSCYIRPFYFVGNYGINLHVTEKAPTNVAIFTFPFGDLFNKNGISAGVVSWRKFSDMSTPPQAKMGGNYLNSIIATQEAKRNGVDEAILLDHNGNVSEAPGENIFIVREGQIATPSLASAALEGITRDAVIKIAKDLDIEIVERDITRSELAISDEIFLTGTAAEITPIISLDGKKIDNGKPGDITKKMMEEYTDIVMNKNDNYSHWLTAVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ72</accession>
    <name>A0A087RZ72_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18776">
        <property type="protein sequence ID" value="KFM18776"/>
        <property type="gene ID" value="AAA799P11_00985"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.951"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="54" mass="6030" checksum="BB039D24104DA116" modified="2014-10-29" version="1">MACFCGCETYEKNDNGFKIACVKCGHGPQNHDDEFRAAARKNESQSQKRDADFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ87</accession>
    <name>A0A087RZ87_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18791">
        <property type="protein sequence ID" value="KFM18791"/>
        <property type="gene ID" value="AAA799P11_01000"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="502" mass="59343" checksum="880E8FB634686755" modified="2014-10-29" version="1">MSENITSDFILRYIQNNQKCLIINSSTDTFPEKISKIFNETFWLQIQEDENKHQMNSHNVKFLNFENFENHFSPNSFDLILIDNWNEFQSDKIIFLNILNEAQKILKKHACILFLIDKQNPKYDSLNNLKNIESVLKDLNFQISKDWILPSVLNPLYSGNLSNLQSLSWFLQNIENFIPSFKKKSFKKNLFFKSIKIVNQKILPFFIKFFTPSFIVCCSQGEMKSYESHLLNKTKLKSSIFVNRPFKLMYILFDEFGNPQQTVSLDKKMLDNVQTENLFQKLDEIAVYRDWVDGRIIDPLNYNEVILAISWIIEFQKSNQQNVYNDDEIDTEINSIRETLSDISELKEYPISEWIDEYENFLKHNSIHKTSIHGDLSHKNMILSPDMKKIEVIDWNFFKKVGNPMDDIGNFLFRLLTKSKTQSKIAAFKLKLENSDTKFNKLQVVVEKKLSNHFNFNFNFLFAMKIYFLKSLYSKILNNDELSLDLEYVSILSKILSENKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC4</accession>
    <name>A0A087RZC4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Agmatinase protein</fullName>
            <ecNumber evidence="5">3.5.3.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">speB</name>
        <name evidence="5" type="ORF">AAA799P11_00949</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arginase family. Agmatinase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.11" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18828">
        <property type="protein sequence ID" value="KFM18828"/>
        <property type="gene ID" value="AAA799P11_00949"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.915"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008783">
        <property type="term" value="F:agmatinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005925">
        <property type="entry name" value="Agmatinase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11358">
        <property type="entry name" value="PTHR11358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036979">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01230">
        <property type="entry name" value="agmatinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="282" mass="31357" checksum="A172A7BB613CECFE" modified="2014-10-29" version="1">MEKICWANTDNFEQSEFVIIGIPDESQSHALRKGTEEAPSKIRQISNLRDSFERDGKLSLGRPFQGSEKKVHDFGDINRSQIEDVYDKISKSSKIPISIGGDHSITRQIINQMTKKHGKVSLVYFDAHPDLVSSTTDYYGSVVNDVLSNIKVSSSVQIGIRTPEQEELDNIKKFNLKIITPFDIREQGVKQVTNSIMEKLGDKVYISFDMDCIDPAYAPGVSVPVPMGLSSTDAVYLLKQIAKKGIIGMDVMEVCPSFDVKDRTSHLASRMISEVLYSSGGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZJ5</accession>
    <name>A0A087RZJ5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18899">
        <property type="protein sequence ID" value="KFM18899"/>
        <property type="gene ID" value="AAA799P11_00930"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.893"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="14798" checksum="4D93137864C89B0A" modified="2014-10-29" version="1">MANSEGALNLYAEKCKKLLEESEIRFAGIVDKDGQLISGGFKEGLTPYEGDETRLQSFLEFVSKASIRKEYDESLGPINYLAARRDKAVLVSFPFPITQILLLISAEPTANIENLAKKVVEIFTDVTKRLSKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL3</accession>
    <name>A0A087RZL3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00858</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18917">
        <property type="protein sequence ID" value="KFM18917"/>
        <property type="gene ID" value="AAA799P11_00858"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.824"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11467" checksum="A4BB04F09C50FAF0" modified="2014-10-29" version="1">MADNFDREKVVDCMFDPITSSILAELEDGEKTCSFLAEQASISESEVLERLSYLLEHKFIIKNTDDQTTLSANSEKLSSVVESSENFDQTISGLEKMDSYLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM4</accession>
    <name>A0A087RZM4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00869</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18928">
        <property type="protein sequence ID" value="KFM18928"/>
        <property type="gene ID" value="AAA799P11_00869"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="131" mass="15087" checksum="F64AE7CE028BAF1B" modified="2014-10-29" version="1">MKNNLDFPIVVFDNQCYLCVKFAKFVDFFARGKMKMIGHYTKQGEMIREKILDESALEMFWFIDEKKAYGGRSALLPVIKTIFSNKSKKFPTTGINEQCSQDCKSVRAVFVRSTSLISNSKIINIDDEVHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM9</accession>
    <name>A0A087RZM9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative metal ion transporter YfjQ protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yfjQ</name>
        <name evidence="7" type="ORF">AAA799P11_00874</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18933">
        <property type="protein sequence ID" value="KFM18933"/>
        <property type="gene ID" value="AAA799P11_00874"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.841"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046873">
        <property type="term" value="F:metal ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045861">
        <property type="entry name" value="CorA_cytoplasmic_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045863">
        <property type="entry name" value="CorA_TM1_TM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002523">
        <property type="entry name" value="MgTranspt_CorA/ZnTranspt_ZntB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01544">
        <property type="entry name" value="CorA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143865">
        <property type="entry name" value="SSF143865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144083">
        <property type="entry name" value="SSF144083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="270"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="311"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="340" mass="39113" checksum="85F6D6393B488D55" modified="2014-10-29" version="1">MRKGFISNRLRSGRKPIESSIEKKIETIQAEKFVWIDLQNPDRTDVEELAKKYNFNSLNIEDCMTKFELPKLDSYDDHFFVILHFPPLTQKVGISKNSQLSIFVGKDFLVTIHQGDLKPLVDLVNTCISNSDEQRKNRILQKSSGLLLHEIIDVLVDDLLHTSRKIIANLDEIEDRVFDEAKPVARSIALLRREINRLRRIATPLKKFVLEITKNVKKFSERDEEDLSLYFDDVIDHIDKVIETLEESRETMEIYKDTDFVLSTEKTNKVLAVLTIIFTLAIPATVIGTFYGMNVNLPGGVEENPMFLGPFTTFIIVILASAIPALMMFTYFKKLGWINN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZQ7</accession>
    <name>A0A087RZQ7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00808</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18961">
        <property type="protein sequence ID" value="KFM18961"/>
        <property type="gene ID" value="AAA799P11_00808"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="13812" checksum="BB41637E926DBFF6" modified="2014-10-29" version="1">MKKHLPKGSIITLDHKAHELTKYQTPLDLYVYVDDVEKVSKLLKNHGFREGKRGNVVLLPKVGSFENQIERVFLDCIANGGRSFLDAAAIMLTHKDMIKTRARFAGDTILKVQEDLPTETAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT8</accession>
    <name>A0A087RZT8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0215 protein AAA799P11_00844</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00844</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0215 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18992">
        <property type="protein sequence ID" value="KFM18992"/>
        <property type="gene ID" value="AAA799P11_00844"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.811"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00582">
        <property type="entry name" value="UPF0215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002802">
        <property type="entry name" value="DUF99"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39518">
        <property type="entry name" value="PTHR39518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01949">
        <property type="entry name" value="DUF99"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006380">
        <property type="entry name" value="UCP006380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="193" mass="21787" checksum="1F70A64E00406602" modified="2014-10-29" version="1">MRSLHLEKKGLRGLAIAESFKQNSTKSIFSGVVMRRDFVIDGFVFGSATLEGDDATDTILKMYDDLQRPDISYVLISGLIVSMYNIIDIKKLFDTLQIPIIGVSYHDSSGIKDSLKHHFPNSFESKINEYEKLGKREKITLNTSHDVYIRKEGCTLNEVKHLLDDLTLHGSIPEPIRVSQLLAKTLLEKGLSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU0</accession>
    <name>A0A087RZU0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">2-hydroxy-3-oxopropionate reductase protein</fullName>
            <ecNumber evidence="3">1.1.1.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">garR</name>
        <name evidence="3" type="ORF">AAA799P11_00846</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.31" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18994">
        <property type="protein sequence ID" value="KFM18994"/>
        <property type="gene ID" value="AAA799P11_00846"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.813"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008442">
        <property type="term" value="F:3-hydroxyisobutyrate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015815">
        <property type="entry name" value="HIBADH-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="NADP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000103">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_2" evidence="1">
        <location>
            <begin position="3"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="NAD_binding_11" evidence="2">
        <location>
            <begin position="165"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="292" mass="32096" checksum="7324331921B64369" modified="2014-10-29" version="1">MKKIGIVGLGMLGNAVALHLLDSGFEVTVFNRNKDKTIQAKNKGAIVVDSPKKVAKKSDLVITVVKDADAVKEVSFGEEGIVKGENKELIVADMSTIDPSESKNISYKFQEFGINKLDIPVMGGPNVAITGDLVMMVSGDKESFEECKSIFEKIANKVFFLGEKGVAHSVKLAMNLQITMLALALSEGITLVKKANVDPKIFLEILNSTYFKTGMSENKAFKMIEGKYEPTFTLENLKKDITTMTYAAKSLGIELPMIQKAEEVYENAVKEGLGSIDYTGIIEYIKRINEYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU1</accession>
    <name>A0A087RZU1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00847</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18995">
        <property type="protein sequence ID" value="KFM18995"/>
        <property type="gene ID" value="AAA799P11_00847"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.814"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="14369" checksum="9772334DD7D4184D" modified="2014-10-29" version="1">MVFVDERFGEEVVAWLNEHAKTQKIKLEARLYGYTVSTKNFGDFEMFSWMGDVQVARKLIIKASKRFKVKVIEGGYKPKEKVLSMKKFDFAKVKRGDKTVGQLKFSAPRFGNGQWEIEDEERH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU3</accession>
    <name>A0A087RZU3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00849</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18997">
        <property type="protein sequence ID" value="KFM18997"/>
        <property type="gene ID" value="AAA799P11_00849"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.816"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11867" checksum="4EE439858EA9FF00" modified="2014-10-29" version="1">MRKILDKFVTGFFVVILGIAWYCSTKFYIKPDRHSIVVYDVFGKEIKLEGVRVDFKTCNVAQSYISEYKKRFPQYNFAMAIEVPEIKKNTIPRILKKIHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L9</accession>
    <name>A0A087S0L9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ribonuclease VapC4 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">vapC4</name>
        <name evidence="2" type="ORF">AAA799P11_00791</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19273">
        <property type="protein sequence ID" value="KFM19273"/>
        <property type="gene ID" value="AAA799P11_00791"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.762"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041120">
        <property type="entry name" value="PIN_9"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18477">
        <property type="entry name" value="PIN_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PIN_9" evidence="1">
        <location>
            <begin position="4"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="13775" checksum="30C659D98B5A6FC2" modified="2014-10-29" version="1">MVEVICDTSFLINLATRRIKNIDNLDVEIGTISFVVPEVVKTELLKLQIIPEKKHDIEKTLDFIKNFKTIPLSGSFADKELLEFTKSKKSIIGTMDKKLKKQVKHVGGSILSFSNDKIVLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S130</accession>
    <name>A0A087S130_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Thiamine_BP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00758</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0045 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19434">
        <property type="protein sequence ID" value="KFM19434"/>
        <property type="gene ID" value="AAA799P11_00758"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.930">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029756">
        <property type="entry name" value="MTH1187/YkoF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002767">
        <property type="entry name" value="Thiamine_BP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01910">
        <property type="entry name" value="Thiamine_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89957">
        <property type="entry name" value="SSF89957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00106">
        <property type="entry name" value="TIGR00106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thiamine_BP" evidence="3">
        <location>
            <begin position="4"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="101" mass="11500" checksum="0E933B42A327E42F" modified="2014-10-29" version="1">MIHAEISVYPMATKTTSASFYIAKAIETIQKIENLKYEINPMGTILESDDMDVINKATKQMTETVHNLGINRVEVIIKIDSRKDKHQSGQEKLESIKKHLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C0</accession>
    <name>A0A087S1C0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">tRNA-splicing endonuclease protein</fullName>
            <ecNumber evidence="3">4.6.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">endA</name>
        <name evidence="3" type="ORF">AAA799P11_00725</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.16" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19524">
        <property type="protein sequence ID" value="KFM19524"/>
        <property type="gene ID" value="AAA799P11_00725"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.697"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000213">
        <property type="term" value="F:tRNA-intron endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006388">
        <property type="term" value="P:tRNA splicing, via endonucleolytic cleavage and ligation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036167">
        <property type="entry name" value="tRNA_intron_Endo_cat-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006677">
        <property type="entry name" value="tRNA_intron_Endonuc_cat-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006678">
        <property type="entry name" value="tRNA_intron_Endonuc_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036740">
        <property type="entry name" value="tRNA_intron_Endonuc_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006676">
        <property type="entry name" value="tRNA_splic"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21227">
        <property type="entry name" value="PTHR21227"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01974">
        <property type="entry name" value="tRNA_int_endo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02778">
        <property type="entry name" value="tRNA_int_endo_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53032">
        <property type="entry name" value="SSF53032"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55267">
        <property type="entry name" value="SSF55267"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00324">
        <property type="entry name" value="endA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA_int_endo_N" evidence="2">
        <location>
            <begin position="48"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA_int_endo" evidence="1">
        <location>
            <begin position="133"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02778"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="225" mass="26385" checksum="2653B60298A4618F" modified="2014-10-29" version="1">MPESIRFFHFVSIEPINKSHLHFHFIFYFKKYQKSNEFIYTKVFKKIMKGELIENRVIVWNIEDSRKLFSEGYYGKPIGIPKPKIEEIDAPLVLDLIESLYLLENKKITISKSKRKVTVEQMIEICKDEHHDFDKKYLVYKNFRDKGYIINPGIKFGCDFAVYEKGPGIDHAPFLIQVYNRNEPITSTGIVLAGRLATSVKKQFILAIPKGKDNVDFLALDWWKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E6</accession>
    <name>A0A087S1E6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00539</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19550">
        <property type="protein sequence ID" value="KFM19550"/>
        <property type="gene ID" value="AAA799P11_00539"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="13002" checksum="9C15D2DA586CCB4B" modified="2014-10-29" version="1">MPVISEVINERKLWVILSTRKNTNKVDELEIVKPLVEKLNEEWFKKGDFIWAGRFDDGMTSMAIFDATEEKAKNYFEHYSKICKNALDVKLYKWDAMPLFTILERIQGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G0</accession>
    <name>A0A087S1G0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00553</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19564">
        <property type="protein sequence ID" value="KFM19564"/>
        <property type="gene ID" value="AAA799P11_00553"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.537"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027359">
        <property type="entry name" value="Volt_channel_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="5"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="84"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="129" mass="14891" checksum="63C18D4F075367A5" modified="2014-10-29" version="1">MIYKILDFAIIAIGLIFFVGVVSFEFDTIGFSKPILQLPYELKPFFDALIWPLVALLVFDLTLKYRKVKDPKKFVKKHWIDIALLVLIPIFSAFKFFKIGLSLVKKLKTVKMGTKVAHKTKKITQSNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G8</accession>
    <name>A0A087S1G8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alpha-aminoadipate--LysW ligase LysX protein</fullName>
            <ecNumber evidence="6">6.3.2.n4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lysX</name>
        <name evidence="6" type="ORF">AAA799P11_00561</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RimK family. LysX subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.n4" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19572">
        <property type="protein sequence ID" value="KFM19572"/>
        <property type="gene ID" value="AAA799P11_00561"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.545"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009085">
        <property type="term" value="P:lysine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013651">
        <property type="entry name" value="ATP-grasp_RimK-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011870">
        <property type="entry name" value="LysX_arch"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004666">
        <property type="entry name" value="RpS6_RimK/Lys_biosynth_LsyX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08443">
        <property type="entry name" value="RimK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02144">
        <property type="entry name" value="LysX_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00768">
        <property type="entry name" value="rimK_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="5">
        <location>
            <begin position="95"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="285" mass="31864" checksum="CE73C1BB85AD4760" modified="2014-10-29" version="1">MSKVCIVFDRLRAEEKMLQKEAAELGHDTVMLDAKITQVNTDSKKEDFDLGDVVLERCVSYFRGLHFTASLEFMDIPVLNKFDVASICGNKMFMTLLLKKAGVPTPKTYFSFTSESAAENLEKVGYPLVIKPVIGSWGRGVMPIKDRDTLDAISEIRDITDSPHDRIYYLQELVKRPPRDIRVITVGDEPVAAMYRKSSGGFKTNIALGADPELCEITKEMEDMAAKASKAMGGGILGIDMMEDEKNGLVVHEVNNTVEFKGLARVAQRNIPKEMVEFALNYVRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K1</accession>
    <name>A0A087S1K1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative short-chain type dehydrogenase-reductase VdlC protein</fullName>
            <ecNumber evidence="2">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">vdlC</name>
        <name evidence="2" type="ORF">AAA799P11_00594</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19605">
        <property type="protein sequence ID" value="KFM19605"/>
        <property type="gene ID" value="AAA799P11_00594"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.578"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="276" mass="30428" checksum="5115C91682A94C03" modified="2014-10-29" version="1">MEKVALVTGSSSGIGLETALALAKDEYHTFASMRDLSKAVELENAAKKESLRIEVIELDVDKEESIVSAVKKVIDSAGRLDVLVNNAGYGQFGCTEDVTVDDFRKQFETNFFSIVRIIQEVAPIMRNQKSGSIINISSVAGRMGLPGSPAYISSKFALEGLGECLRYELGQFGIKTTLIEPGVIKTNFFESMKIPDSKTDPKYKELTDHILAGLKMMVQMGTAPSQVAEVIIKAIHDEEMLPRYVVGTDAAMFMEAKKMKTDLEFEKYMSKELFPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K2</accession>
    <name>A0A087S1K2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">2-alkenal reductase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00595</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type IB topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19606">
        <property type="protein sequence ID" value="KFM19606"/>
        <property type="gene ID" value="AAA799P11_00595"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.579"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003917">
        <property type="term" value="F:DNA topoisomerase type I (single strand cut, ATP-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.41">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.11.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013034">
        <property type="entry name" value="DNA_topo_DNA_db_N_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013030">
        <property type="entry name" value="DNA_topo_DNA_db_N_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001631">
        <property type="entry name" value="TopoI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025834">
        <property type="entry name" value="TopoI_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014711">
        <property type="entry name" value="TopoI_cat_a-hlx-sub_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014727">
        <property type="entry name" value="TopoI_cat_a/b-sub_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013500">
        <property type="entry name" value="TopoI_cat_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008336">
        <property type="entry name" value="TopoI_DNA-bd_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036202">
        <property type="entry name" value="TopoI_DNA-bd_euk_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013499">
        <property type="entry name" value="TopoI_euk"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14370">
        <property type="entry name" value="Topo_C_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01028">
        <property type="entry name" value="Topoisom_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02919">
        <property type="entry name" value="Topoisom_I_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00416">
        <property type="entry name" value="EUTPISMRASEI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00435">
        <property type="entry name" value="TOPEUc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56741">
        <property type="entry name" value="SSF56741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="TOPEUc" evidence="6">
        <location>
            <begin position="146"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="460"/>
            <end position="498"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="553" mass="64815" checksum="3DBD2780CE47763A" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N2</accession>
    <name>A0A087S1N2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19636">
        <property type="protein sequence ID" value="KFM19636"/>
        <property type="gene ID" value="AAA799P11_00625"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.611"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8497" checksum="FE0F8A425C7C41EA" modified="2014-10-29" version="1">MELLSEDEKHTKLTKKEIILRGSIIALITTIPSLIIFVLVWYFLDDVVIGAISGAIVHFVAMGFSLKISKKLLVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P9</accession>
    <name>A0A087S1P9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00642</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19653">
        <property type="protein sequence ID" value="KFM19653"/>
        <property type="gene ID" value="AAA799P11_00642"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.628"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="153" mass="17572" checksum="51B5FB644121EAB9" modified="2014-10-29" version="1">MVGENFAGNIIVNLANLPDFLRNPILKKRMMEFFSLSKPDQDEVINNALEAGPTIPFPNFAKLFKTWLKILVTLSEEQREGLFSAYITEVSQNPQKLITFNVDGILEIYLTLEDNEKEILSNAVKKIINNLDEDKKRRIMLVIPENAKKHLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q9</accession>
    <name>A0A087S1Q9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative acetolactate synthase large subunit protein</fullName>
            <ecNumber evidence="6">2.2.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ilvB</name>
        <name evidence="6" type="ORF">AAA799P11_00652</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19663">
        <property type="protein sequence ID" value="KFM19663"/>
        <property type="gene ID" value="AAA799P11_00652"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.638"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006082">
        <property type="term" value="P:organic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044272">
        <property type="term" value="P:sulfur compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="5">
        <location>
            <begin position="1"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="3">
        <location>
            <begin position="186"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="4">
        <location>
            <begin position="390"/>
            <end position="537"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="563" mass="62933" checksum="8337BE64CD59A240" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R3</accession>
    <name>A0A087S1R3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00656</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19667">
        <property type="protein sequence ID" value="KFM19667"/>
        <property type="gene ID" value="AAA799P11_00656"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="41" mass="4891" checksum="267C546E21EA4992" modified="2014-10-29" version="1">MSSIMIDYYKYLRCPECVKNGLYCKPHKIEVEKLLAKEKQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R7</accession>
    <name>A0A087S1R7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19671">
        <property type="protein sequence ID" value="KFM19671"/>
        <property type="gene ID" value="AAA799P11_00660"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="81" mass="9361" checksum="4E82F5A416D9D255" modified="2014-10-29" version="1">MTKRIEEELAEMNRLKRLELEFLFFKTKMDATMYKKFRDALTLDGAMSEDTVLGDIDIDSESQNYDGNTSPEKFSIKKVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R8</accession>
    <name>A0A087S1R8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00661</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19672">
        <property type="protein sequence ID" value="KFM19672"/>
        <property type="gene ID" value="AAA799P11_00661"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="38" mass="4581" checksum="50ECB5049F6A203A" modified="2014-10-29" version="1">MKYNCKYCKFTWEGFPDTFDKVLTHEKTHKKGKTHGDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W1</accession>
    <name>A0A087S1W1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulatory protein AsnC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19715">
        <property type="protein sequence ID" value="KFM19715"/>
        <property type="gene ID" value="AAA799P11_00455"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.435"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013603">
        <property type="entry name" value="TRASH_TR_C_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08394">
        <property type="entry name" value="Arc_trans_TRASH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="144" mass="16491" checksum="C7FBB35B1770B760" modified="2014-10-29" version="1">MPHELDDMDIGIVTSLQEDGRKSFRQIARELNTSTPTIHARYQRLVNIGLIKSISPIIDISNITDKQKQQIQECSYHKSTNVDLKSGMSVNMKCDLCDGVIGDKPHVLKFANFERFFCCNTCKTHYKEKNKGRIESIIEKSKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W7</accession>
    <name>A0A087S1W7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenosinetriphosphatase protein</fullName>
            <ecNumber evidence="3">3.6.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00461</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.3" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19721">
        <property type="protein sequence ID" value="KFM19721"/>
        <property type="gene ID" value="AAA799P11_00461"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.441"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140658">
        <property type="term" value="F:ATP-dependent chromatin remodeler activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="119"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="405"/>
            <end position="558"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="570" mass="65434" checksum="91234B56AA74EEDF" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X2</accession>
    <name>A0A087S1X2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SWIM-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00466</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19726">
        <property type="protein sequence ID" value="KFM19726"/>
        <property type="gene ID" value="AAA799P11_00466"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.447"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="2">
        <location>
            <begin position="26"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="80" mass="8989" checksum="9302F15AF1ED8C8A" modified="2014-10-29" version="1">MSANTIRKAKKLVESGGVSKIDDDLFQIKSSSDPEKSYFVTSDTCECPGFKNFYKFHHGKGLKANCSHLEAIRIFKKENS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X8</accession>
    <name>A0A087S1X8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00472</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19732">
        <property type="protein sequence ID" value="KFM19732"/>
        <property type="gene ID" value="AAA799P11_00472"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.455"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="87" mass="9146" checksum="56A1BD38DD5A6B08" modified="2014-10-29" version="1">MVLPFPYGLGAALAIFIAFPLILRRRYMNRMRGGYGGSDSGTGGGGFFGMGSQGGSGGVRYVCLVCNNKHKGGSCPRCGSKMQRADF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y3</accession>
    <name>A0A087S1Y3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00477</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19737">
        <property type="protein sequence ID" value="KFM19737"/>
        <property type="gene ID" value="AAA799P11_00477"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.460"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="125" mass="14400" checksum="9BE3054443F7F458" modified="2014-10-29" version="1">MSRSRTITVTINKKTGDAFDAILQLPPKMMPDAKFHDDGWWSFTGPHGKSKLKFNENKSLGILDHKYIDEESVWDVPMRVVSNGEYSEILITLNKPDELSDEQFNKRMDEIGEMVNHMKQIIESS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z7</accession>
    <name>A0A087S1Z7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative tRNA pseudouridine synthase B protein</fullName>
            <ecNumber evidence="2">1.8.4.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">truB</name>
        <name evidence="2" type="ORF">AAA799P11_00496</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.8" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19751">
        <property type="protein sequence ID" value="KFM19751"/>
        <property type="gene ID" value="AAA799P11_00496"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.474"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004604">
        <property type="term" value="F:phosphoadenylyl-sulfate reductase (thioredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016437">
        <property type="entry name" value="MCT-1/Tma20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036974">
        <property type="entry name" value="PUA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004521">
        <property type="entry name" value="Uncharacterised_CHP00451"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22798">
        <property type="entry name" value="PTHR22798"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01472">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005067">
        <property type="entry name" value="Tma_RNA-bind_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00451">
        <property type="entry name" value="unchar_dom_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PUA" evidence="1">
        <location>
            <begin position="72"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="158" mass="17859" checksum="B38BDBE911D41146" modified="2014-10-29" version="1">MKSNLISKSETSALLKTVSEEWGIELPKIKNLKVHQILDDAQIITGKGIKILKINEDYLPFLSETDTLEKFPSITVDMGAVKFMCKGANLMRPGIRSFTEFEKNKLVCIVEESQHKFLAVGKSVVSSDEAEKMDKGEVVKNLHYISDKFWETGKTIYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S207</accession>
    <name>A0A087S207_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endonuclease VII protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00506</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19761">
        <property type="protein sequence ID" value="KFM19761"/>
        <property type="gene ID" value="AAA799P11_00506"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1800.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004211">
        <property type="entry name" value="Endonuclease_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038563">
        <property type="entry name" value="Endonuclease_7_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044925">
        <property type="entry name" value="His-Me_finger_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02945">
        <property type="entry name" value="Endonuclease_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54060">
        <property type="entry name" value="SSF54060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="137" mass="15889" checksum="E63EF7BF72CD3260" modified="2014-10-29" version="1">MSDPDATKLKWCRECKQEKLGTEFAKNQVGKNNRVVRRPVCKECYAKKKTIDPKLRREYVKDNPAPKIGEKFTCPICQKTKTREHNNEICLDHNHKTGKIRGWICGSCNSSIGKFNEDISVLERAIHWLKGTLHVFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S221</accession>
    <name>A0A087S221_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sulfite reductase ferredoxin 1 protein</fullName>
            <ecNumber evidence="5">1.8.7.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sir1</name>
        <name evidence="5" type="ORF">AAA799P11_00520</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.7.1" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19775">
        <property type="protein sequence ID" value="KFM19775"/>
        <property type="gene ID" value="AAA799P11_00520"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.502"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050311">
        <property type="term" value="F:sulfite reductase (ferredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036136">
        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006066">
        <property type="entry name" value="NO2/SO3_Rdtase_FeS/sirohaem_BS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03460">
        <property type="entry name" value="NIR_SIR_ferr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00397">
        <property type="entry name" value="SIROHAEM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55124">
        <property type="entry name" value="SSF55124"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0349">Heme</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NIR_SIR_ferr" evidence="4">
        <location>
            <begin position="63"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="3">
        <location>
            <begin position="133"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR_ferr" evidence="4">
        <location>
            <begin position="337"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="3">
        <location>
            <begin position="413"/>
            <end position="547"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="602" mass="67700" checksum="0CD8C094D7796070" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S294</accession>
    <name>A0A087S294_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Naphthalene 12-dioxygenase system ferredoxin subunit protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ndoA</name>
        <name evidence="5" type="ORF">AAA799P11_00377</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19848">
        <property type="protein sequence ID" value="KFM19848"/>
        <property type="gene ID" value="AAA799P11_00377"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.366"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="4">
        <location>
            <begin position="8"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="105" mass="11757" checksum="99BE4F3BB0DE4756" modified="2014-10-29" version="1">MIFLSEWIKACNIDQVKEGQLFGFTHDEKKILLANLKGKIHATDLICTHADADLSTGFLSDEGVRCPLHLSVFNLENGEPQNLPAETPLKVYNVKIDDSEIYVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B8</accession>
    <name>A0A087S2B8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Signal recognition particle 19 kDa protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">srp19</name>
        <name evidence="5" type="ORF">AAA799P11_00406</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19872">
        <property type="protein sequence ID" value="KFM19872"/>
        <property type="gene ID" value="AAA799P11_00406"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.391"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048500">
        <property type="term" value="C:signal recognition particle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008312">
        <property type="term" value="F:7S RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.56.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002778">
        <property type="entry name" value="Signal_recog_particle_SRP19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036521">
        <property type="entry name" value="SRP19-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01922">
        <property type="entry name" value="SRP19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69695">
        <property type="entry name" value="SSF69695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0733">Signal recognition particle</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="99" mass="11437" checksum="C3E6547C26A0A13A" modified="2014-10-29" version="1">MKDYEHVVIWLDYFNKNLKKSKGRRLGLEKCVFDPSLKELMDATKSAGFEITESDDKVRFPKRPFVRSGYVVLPKGSSKTKILNKISEKLVAKRSKQSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B9</accession>
    <name>A0A087S2B9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">30S ribosomal protein S8e</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rps8e</name>
        <name evidence="5" type="ORF">AAA799P11_00407</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eS8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19873">
        <property type="protein sequence ID" value="KFM19873"/>
        <property type="gene ID" value="AAA799P11_00407"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.392"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001047">
        <property type="entry name" value="Ribosomal_S8e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022309">
        <property type="entry name" value="Ribosomal_S8e/biogenesis_NSA2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10394">
        <property type="entry name" value="PTHR10394"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01201">
        <property type="entry name" value="Ribosomal_S8e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00307">
        <property type="entry name" value="eS8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="127" mass="14090" checksum="624ACB0EFFE63C35" modified="2014-10-29" version="1">MRKSVENLATSKTTGGRRHPLRIRRKYETDRYPNEAVTGAQVTVTRAVRGKNRKTAVKTIDFVNLATGDAKVKKTKILKVLDNATNNDYKRRGIITKGAILETQEGKCRVVSKPGQNGIVNAVLVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2F1</accession>
    <name>A0A087S2F1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 9">Chorismate synthase</fullName>
            <shortName evidence="8">CS</shortName>
            <ecNumber evidence="4 8 9">4.2.3.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">5-enolpyruvylshikimate-3-phosphate phospholyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">aroC</name>
        <name evidence="10" type="ORF">AAA799P11_00444</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 9">
            <text>5-O-(1-carboxyvinyl)-3-phosphoshikimate = chorismate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21020"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57701"/>
            <dbReference type="EC" id="4.2.3.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8 9">
            <name>FMNH2</name>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
        </cofactor>
        <text evidence="8 9">Reduced FMN (FMNH(2)).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8 9">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 7/7.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 9">Belongs to the chorismate synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.5" evidence="4 8 9"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19905">
        <property type="protein sequence ID" value="KFM19905"/>
        <property type="gene ID" value="AAA799P11_00444"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.425"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004107">
        <property type="term" value="F:chorismate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd07304">
        <property type="entry name" value="Chorismate_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00300">
        <property type="entry name" value="Chorismate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000453">
        <property type="entry name" value="Chorismate_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035904">
        <property type="entry name" value="Chorismate_synth_AroC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020541">
        <property type="entry name" value="Chorismate_synthase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21085">
        <property type="entry name" value="PTHR21085"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01264">
        <property type="entry name" value="Chorismate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001456">
        <property type="entry name" value="Chorismate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103263">
        <property type="entry name" value="SSF103263"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00033">
        <property type="entry name" value="aroC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00787">
        <property type="entry name" value="CHORISMATE_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00788">
        <property type="entry name" value="CHORISMATE_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 8 9" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0274">FAD</keyword>
    <keyword evidence="8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0288">FMN</keyword>
    <keyword evidence="7 8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-0521">NADP</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="8">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="127"/>
            <end position="129"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="288"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="303"/>
            <end position="307"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="330"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="365" mass="39549" checksum="506B4C76E802C9DD" modified="2014-10-29" version="1">MLPGSSIGQRLVLTSFGESHGKSIGAVLDGCPAGLEIDEKDIQKMLDQRKPGQNLISTQRKEGDVVEIISGVFRGHTTGAPITMVIWNSDQKSKDYENLKTKLRPGHSDYPAMIKYNQYNDHRGGGRFSGRLTATHVMGGAIARKILKVTLGIETNSFTSQIGKIKMEREFNEKMINSIYKNEVRCPETKTAKMMRASILDARKRGDSLGGIIESVTTNVPVGLGEPIFSSLESDLSKAMFSIPSVKGVEFGSGFKGSELYGSENNDLYTVKRGKIITKTNNSGGILGGISNGMPITMRIAFKPASSISQKQSTVDIKTKKETTLQVKGRHDPCVVPRAPPVVDSLVALTIADHALISGQIKPVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L2</accession>
    <name>A0A087S2L2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19966">
        <property type="protein sequence ID" value="KFM19966"/>
        <property type="gene ID" value="AAA799P11_00270"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.264"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="13224" checksum="DC9542681473D085" modified="2014-10-29" version="1">MAKPTIELPISKKPTDAELKKLKDYFKEMPVDEILTGLKFAKNRWSAKDAGTLKVGRKSIIQKEVHSVTTEQAQWRLKNWKMMIANYRRRGYSYPTISRIKKILVQKSKKKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N7</accession>
    <name>A0A087S2N7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Threonine synthase protein</fullName>
            <ecNumber evidence="2">4.2.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19991">
        <property type="protein sequence ID" value="KFM19991"/>
        <property type="gene ID" value="AAA799P11_00295"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.288"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004795">
        <property type="term" value="F:threonine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="1">
        <location>
            <begin position="118"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="447" mass="49491" checksum="6C11D82838E47CC9" modified="2014-10-29" version="1">MTMQGDAYLKCIDPQCRMEYPIESTNVQCEKGHLLDVKYKHTPSDSLKEVFYNRRNHQKSIFNESGVWRFRELLNFCQIDTENMEECSKYLVSLDGAEGRLSKPYQMSKAAEFIGISKDNLWLQPEGYNPSGSFKDNGMTTAVTHAKMVGAKKIVCASTGNTSASAGMFAANEGINCDVYIPAGQIAPGKLSQAYQFGAQILEIDGNFDDALKQSLDDAQNHDGYTVNSINPFRIEGQKTIPFRALEHLDWEVPDWIVYPGGALGNTSSCGKALMELYEWGWIKKIPRIAVINSEGASTLSDLYNGKFEGEELRWNKGKPNTELITRYYDHLDKEGIRPKTKATAIQIGRPANILKGLRALEFTNGVATTVSDSDMLDGMSVVGLNGFDCEMASGASVVGVKKLIDNGVIKKDDTIVGILTGRQKDAMLPVDYHHNPQNKFAKPPKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N9</accession>
    <name>A0A087S2N9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00297</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19993">
        <property type="protein sequence ID" value="KFM19993"/>
        <property type="gene ID" value="AAA799P11_00297"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.291"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="105" mass="11613" checksum="5D615F10B36135B5" modified="2014-10-29" version="1">MSSKEFDVNGTDYKIVITDQVVGHVNNLKNLYNSTYEDPESFEDVSAEISNTINEIAATVEPEVEDSDLDGLIQEVIKAVDSKAEEIEKELEGKESSGKKSKSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P4</accession>
    <name>A0A087S2P4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00302</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19998">
        <property type="protein sequence ID" value="KFM19998"/>
        <property type="gene ID" value="AAA799P11_00302"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="45" mass="5327" checksum="A6D3B524F58E7858" modified="2014-10-29" version="1">MPICAKCSDDVKKVYDCDHTDYEDYCVECYTELHYYMTESESNAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P6</accession>
    <name>A0A087S2P6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucose-1-phosphate thymidylyltransferase protein</fullName>
            <ecNumber evidence="2">2.7.7.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00304</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.24" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20000">
        <property type="protein sequence ID" value="KFM20000"/>
        <property type="gene ID" value="AAA799P11_00304"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.298"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008879">
        <property type="term" value="F:glucose-1-phosphate thymidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="225" mass="25783" checksum="2CB4711700106A8C" modified="2014-10-29" version="1">MKTLKAIILAGGRGKRLKPVTDYVPKPLVPIKNIPIIEWQIRYLKKFGIKEVIICTGYKTEMIENHLNMKDIGIKIKFSIEKSPLGTGGAIKKAGEMIKEKSFFVLNGDTITNIDLKKLEKKKNAIAAIELRTKYGILETEDDKILNFREKKEISDTWMNAGIYHLEKTVLKELPDKGDIEKTVFPKYAKKGTLNTVKFKNTKWYSVDSFKDMEECALEIEKIIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q4</accession>
    <name>A0A087S2Q4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">N5-carboxyaminoimidazole ribonucleotide mutase</fullName>
            <shortName evidence="3 4">N5-CAIR mutase</shortName>
            <ecNumber evidence="3 4">5.4.99.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5-(carboxyamino)imidazole ribonucleotide mutase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 8" type="primary">purE</name>
        <name evidence="8" type="ORF">AAA799P11_00313</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole + H(+) = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate</text>
            <dbReference type="Rhea" id="RHEA:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58730"/>
            <dbReference type="ChEBI" id="CHEBI:77657"/>
            <dbReference type="EC" id="5.4.99.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate from 5-amino-1-(5-phospho-D-ribosyl)imidazole (N5-CAIR route): step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the AIR carboxylase family. Class I subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.18" evidence="3 4"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20008">
        <property type="protein sequence ID" value="KFM20008"/>
        <property type="gene ID" value="AAA799P11_00313"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.306"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034023">
        <property type="term" value="F:5-(carboxyamino)imidazole ribonucleotide mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01929">
        <property type="entry name" value="PurE_classI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033747">
        <property type="entry name" value="PurE_ClassI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000031">
        <property type="entry name" value="PurE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024694">
        <property type="entry name" value="PurE_prokaryotes"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00731">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001338">
        <property type="entry name" value="AIR_carboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01001">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01162">
        <property type="entry name" value="purE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1 3 4" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRC" evidence="7">
        <location>
            <begin position="7"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="161"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="161"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR001338"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001338-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM20008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="191" mass="20682" checksum="53E2BF46A889F155" modified="2014-10-29" version="1">MTYAKKPLVGIIMGSSSDSRIMKGAAEILDEFKVKHEDQIISAHRTPARLAEYAQHAEKMGFDVIIAGAGGAAHLPGMIASHTVIPVIGVPILVYNDKHHKKTDTEKFSAFGGLDSLLSITEMPSGSPVVAVGVNKAGNAGIYAMKILANKFPELQKKLKQHKSDQHESVVKESEMMKKQGLSSFAKKKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q8</accession>
    <name>A0A087S2Q8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase 1 protein</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cya1</name>
        <name evidence="2" type="ORF">AAA799P11_00317</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20012">
        <property type="protein sequence ID" value="KFM20012"/>
        <property type="gene ID" value="AAA799P11_00317"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.310"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="1">
        <location>
            <begin position="75"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="263" mass="29611" checksum="2989511947976665" modified="2014-10-29" version="1">MAENSVEKESDSSQDKVVDMLLSSASERTLDSESMILETQKRVWGALKKGYQYSGVSNESDKFLRKNVFSKLDLVVLYVDLVGSTTMTLEMPEEKIAIIISSFAQEMAAVIIQHEGYVLKFVGDAVIGYFDAQSNGLLASDNAVNCAKSMISVIQKGINPILNQYDYPDLMVKVGIDFGQNIVVRYGADEQQSQVDLMGPAMNIAAKIQNMAKPNQILIGSDVYQRLHPNFQRDFVEVVWKKDEWRYRSRVTGEIYKVYEFKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S7</accession>
    <name>A0A087S2S7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00336</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20031">
        <property type="protein sequence ID" value="KFM20031"/>
        <property type="gene ID" value="AAA799P11_00336"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.330"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006334">
        <property type="term" value="P:nucleosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005819">
        <property type="entry name" value="H1/H5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00624">
        <property type="entry name" value="HISTONEH5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="86" mass="9604" checksum="06E1CB41FF50BB58" modified="2014-10-29" version="1">MAEKKSTKKATKSKDVKAKATKSKTTTKAKATKSKAKATKSKKKKEEPVGDMGIVIVDDDIEIDQEKVNEERRAYLEEARSQEAFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U0</accession>
    <name>A0A087S2U0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aspC</name>
        <name evidence="3" type="ORF">AAA799P11_00354</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20044">
        <property type="protein sequence ID" value="KFM20044"/>
        <property type="gene ID" value="AAA799P11_00354"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.343"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="51"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="452" mass="51301" checksum="7C74C0AC82C12E2E" modified="2014-10-29" version="1">MKFVVDQQVEDIEMPENLKLNTFLQEFHSDCTHPECGFGFYGFAFGQSPFPVPRLIQEALIKNANKGEYAAVPGIPELRNAISKYNKHYFGMDISPDRVYVGPGTKELIFNLLEILHGTVILPTPAWLGYLPQIRFLKKNYHMLPTRANKKIAPNDLRRLALRLQDRQKILILNNPHNPTGLLYNRLELEEIADVCRELNITVISDEIYAQTTYDFTKFTSMGKIYPEGTFVTNGLSKSHAAGGYRLGYVIFPQHATDLRTQFKKILATEYTAVSTPIQHAAIPGFEISSEMEEYFEITRNIHKIMSEYTYHQLTAIDGIKATKPEATFYLLADFNAYAPELQKAKITTSQKLSETFIVHPYHTAIVGGDSLVLERTDFSARIAYVDYDGAMVYQKYRDCKPKTLSERTEFVTQNAPKIVAGLGMIEKFFGALKNNAVDELLLLKNSVKIPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U7</accession>
    <name>A0A087S2U7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00361</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20051">
        <property type="protein sequence ID" value="KFM20051"/>
        <property type="gene ID" value="AAA799P11_00361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="60" mass="6549" checksum="ED01C795B0D1AE23" modified="2014-10-29" version="1">MDVLIGIVIAFIIIVAGYVGYHASQEVPAEKHDISLELEVLDADTKTIQSLQQIITKPIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2V3</accession>
    <name>A0A087S2V3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphonate ABC transporter periplasmic phosphonate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00367</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20057">
        <property type="protein sequence ID" value="KFM20057"/>
        <property type="gene ID" value="AAA799P11_00367"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.356"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="192" mass="21027" checksum="190AB2158F363564" modified="2014-10-29" version="1">MKRQTTLALIVAFVAIGIATIPLSQTAQAQGSIPDWIKTNAAWWAEGAVDDATFLNGIEFLIENRIINVSSDSKSVDVDTLTIGFIPVEKAQELTPKAQALEQFLENELGVDVEVVIPTNYETIIEGMRFGHIDAAFMDTGPAWITHERTGAEAVLAELVKGKVNYQATVWTLAELCNLLKILLVKKLHLPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y0</accession>
    <name>A0A087S2Y0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Trans-aconitate 2-methyltransferase protein</fullName>
            <ecNumber evidence="2">2.1.1.144</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.144" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20084">
        <property type="protein sequence ID" value="KFM20084"/>
        <property type="gene ID" value="AAA799P11_00155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006342">
        <property type="entry name" value="FkbM_mtfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05050">
        <property type="entry name" value="Methyltransf_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01444">
        <property type="entry name" value="fkbM_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_21" evidence="1">
        <location>
            <begin position="2"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="185" mass="21283" checksum="168291A07C132C80" modified="2014-10-29" version="1">MDIGAHIGYFTIMAAKNASLGRIYSIEPHKESFEILKKNLLLNNFTNVDTFNVAITKSTGKTRLYIDKNNQIGNTIIKNNNSNESEQVDTFSLRNFVKNSNIEQIDFLKVDCEGAEFEIFLNLEKELLKKIKKISAEIHEYGKNNSIMELKEFFEKNGFSIKISKILEDPTLKLSMLYAKNKNFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S316</accession>
    <name>A0A087S316_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-glucose 4-epimerase protein</fullName>
            <ecNumber evidence="2">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">galE</name>
        <name evidence="2" type="ORF">AAA799P11_00191</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20120">
        <property type="protein sequence ID" value="KFM20120"/>
        <property type="gene ID" value="AAA799P11_00191"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="1">
        <location>
            <begin position="6"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="305" mass="34555" checksum="560B537B5E872F75" modified="2014-10-29" version="1">MKRLRILVVGGGGYIGTLLVTELIKNKFHVRCFDRFSSSETLSRLKLNKDLEIIVGKIQDIDSEKFLDIDIVIDLIAITKDLNGNENEIIQINRNARMKIIEMSKKKGASQYIRISSSNVYAGSIGINNEKQIPSPKTLYSKINLELDKYAISLNDEKFGVTILRLASIFGDSPRMRWDQSINNMIKEFYINGKINVKSKSSKRPFLHIKDAIRAIILVIQSKKESAGEIFNVGSNDMNYSMEEVANEIGGKENVTLHDSKDENSFTMDCIKIKNKLGFEKKYDLGYGINEISNKLKQEKTNSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S321</accession>
    <name>A0A087S321_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucose-1-phosphate cytidylyltransferase protein</fullName>
            <ecNumber evidence="2">2.7.7.33</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rfbF</name>
        <name evidence="2" type="ORF">AAA799P11_00196</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.33" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20125">
        <property type="protein sequence ID" value="KFM20125"/>
        <property type="gene ID" value="AAA799P11_00196"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.195"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047343">
        <property type="term" value="F:glucose-1-phosphate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02524">
        <property type="entry name" value="G1P_cytidylyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013446">
        <property type="entry name" value="G1P_cyt_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47183:SF1">
        <property type="entry name" value="PTHR47183:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02623">
        <property type="entry name" value="G1P_cyt_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="256" mass="29121" checksum="C824A0A97B37A165" modified="2014-10-29" version="1">MKTVILAGGLGTRLSEETALKPKPMVEIGEMPILWHIMKIYSSFGFNDFVICCGYKGVAIKKFFLDYSLEKSDVTFDLSNGDVKYHQKTSEPWKVTLVDTGLETMTGGRLKKVEKYLDDETFFFTYGDTLTNVDLSNLLNFHKTEKKLATVTAVQPVGRFGKFDIREGVIRNFQEKASGDGNWVNGGFFVLEPDVIDYIENDSVSWEGEPLEKLSKEQNISAYKHTGFYQPMDTLRDKLFLNDLWNSGSAPWKVWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S325</accession>
    <name>A0A087S325_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20129">
        <property type="protein sequence ID" value="KFM20129"/>
        <property type="gene ID" value="AAA799P11_00200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="34"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="202"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="275"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="308"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="353"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="384"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="409"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="438" mass="49629" checksum="B99A7CBCFD41B2BC" modified="2014-10-29" version="1">MAKRRVKKETSTPEKPQTDESAPKHASINISKNWIRWAVLVFSLITVIPVVVSTIFPALFHSTSNFSEFEFYSQIVNPFELGALSSAILAVNLILLGIGFLYYKRKMRLNKLFDFDISQKISWIIVAVIIVSYAGFTVNEISTPETWGDFASIEKRMNESIRDDRWPIEDIISDNPNFSSSEPHVKFSLLFFSLKFLGNIKILPFIASISLLIVTYLLTVKITNKRIAGILSLVLVLQSNIFLMYDTSATYSNFWIVFYLISLWMILKKWQLSHAAFIVSIFSKALSVAFLPLTLFFIFRNTYGKKRVYLLASYGVLIILGLALFSLISSESEDMKYFPENFWKGFAASATHLRFDPIVLLFLLPLVVALFLKSKNGFSQAESISVLIAGVLTIPSLLITFTTQTNEPYRLMPLVVFFAIGAGMLLAKIRKEDELSSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S376</accession>
    <name>A0A087S376_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribonuclease J protein</fullName>
            <ecNumber evidence="2">3.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00256</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20180">
        <property type="protein sequence ID" value="KFM20180"/>
        <property type="gene ID" value="AAA799P11_00256"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011108">
        <property type="entry name" value="RMMBL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07521">
        <property type="entry name" value="RMMBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="14"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="467" mass="53388" checksum="61EE8602AFEB593F" modified="2014-10-29" version="1">MTSLTFYGGVNEIGGNKILLEDKDTRVFLDFGKGFTRRAKYFENYINPRVTNGITDFLTMGLVPNISGIYRDDLLELGGKKAEEPEIDAVLLSHAHSDHADYISFLNEKIPVYMGKASELILKALADRAGRTFEREVLDYSPKPYKYGVKPIERDIRTFRTGDKFTVGSLEVEPIHVDHSIPGAYGFIIHTSEGPVVYTGDLRLHGTHSQMTWDFVEKATEVKPIAMITEGTRIDIPEKKESEETVFRDSYKIVSNTNRLVLADFNFKDIDRLRTFYDIAKRSGRKLVIKLSDAHFLKHLEEDQHLDIPKLDDEHIALYLPKRKSGKYDDKDYAEKERQFLNLNNVWTANEIAQHEANSVCCIGFYSFTSLIDMNLDSGAHYIHSASEPYNEEQEISQERVDSWLEHFGMTRHQSHCSGHATGMDLLEIVKNIAPKSIYPIHTEHPEIYQKSVENTILIKEGAQYSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S378</accession>
    <name>A0A087S378_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATPase AAA protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00258</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20182">
        <property type="protein sequence ID" value="KFM20182"/>
        <property type="gene ID" value="AAA799P11_00258"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.252"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="751"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="764"/>
            <end position="783"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="584"/>
            <end position="615"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="852" mass="96920" checksum="82EAE6D81FB00370" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S384</accession>
    <name>A0A087S384_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00264</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20188">
        <property type="protein sequence ID" value="KFM20188"/>
        <property type="gene ID" value="AAA799P11_00264"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="88" mass="10283" checksum="EE55940B98917A2F" modified="2014-10-29" version="1">MRACNGFTCRRLEKISFPFGGKIYTDGVKFCKTCGVFLKIDGYRCPCCKSNVRCKSHSRKWRKKKAKILDTNSEHKYRNNKIKISFHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H0</accession>
    <name>A0A087S3H0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transcriptional regulator MntR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mntR</name>
        <name evidence="7" type="ORF">AAA799P11_00021</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DtxR/MntR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20274">
        <property type="protein sequence ID" value="KFM20274"/>
        <property type="gene ID" value="AAA799P11_00021"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.21"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001367">
        <property type="entry name" value="Fe_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036421">
        <property type="entry name" value="Fe_dep_repressor_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022687">
        <property type="entry name" value="HTH_DTXR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022689">
        <property type="entry name" value="Iron_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02742">
        <property type="entry name" value="Fe_dep_repr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01325">
        <property type="entry name" value="Fe_dep_repress"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00529">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47979">
        <property type="entry name" value="SSF47979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50944">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH dtxR-type" evidence="6">
        <location>
            <begin position="30"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="163" mass="18578" checksum="770BEF90DB02CFA2" modified="2014-10-29" version="1">MASKSNIKTSNKKEKRLESIKKAHSKKNTFTTTMEDYLEVISELVELKGYASPTDISNYMNVRPPSVTKMLRRLDADGYLKYTKYQGLKLTAKGTSIANDIRQKHSDLLDFFEIIGVDSSAANKDVEGIEHHMNPKTMKQLRKFTTFLKSNPNLLLSFDRANL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I0</accession>
    <name>A0A087S3I0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC-Lrp family regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00031</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20284">
        <property type="protein sequence ID" value="KFM20284"/>
        <property type="gene ID" value="AAA799P11_00031"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.31"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="13"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="8750" checksum="AB25E8742F9B3ABC" modified="2014-10-29" version="1">MHKGFILLNCDLGAEEYIVDELNQMQDVKNAYLTFGAYDVIAEIETENQEGFEKAIAVIRKLSRVVSTMTLNVIRPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I9</accession>
    <name>A0A087S3I9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00040</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20293">
        <property type="protein sequence ID" value="KFM20293"/>
        <property type="gene ID" value="AAA799P11_00040"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.39"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="9124" checksum="07DD05153B811096" modified="2014-10-29" version="1">MAEITDEDRERVELLRLVSSSKHEFKNLTLEQLKRLQELVEKKDYSHDKKAHKSKVKLLGKINVRIYEMTEGRGIWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J2</accession>
    <name>A0A087S3J2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00043</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20296">
        <property type="protein sequence ID" value="KFM20296"/>
        <property type="gene ID" value="AAA799P11_00043"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.42"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="8878" checksum="D95F951D68350C50" modified="2014-10-29" version="1">MDKHKPSEEMIKELDNLLSKINAMEIVASDDYQKNSIKIMRALVEGQIHSINEFGHLKKAIDLLTLQLFDVQNKIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K2</accession>
    <name>A0A087S3K2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00053</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20306">
        <property type="protein sequence ID" value="KFM20306"/>
        <property type="gene ID" value="AAA799P11_00053"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="9689" checksum="FC4E86A199D6A7AD" modified="2014-10-29" version="1">MSAGVPVTVISGVSSSGASPGIAITTPEVTIIPPKNAKAKIPLVCFFTNKKANFPCYILFQNIYSNFKSPVTLSIRFSGAGPIEIHVVVPGAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L3</accession>
    <name>A0A087S3L3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative glycosyl hydrolase 12 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00064</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20317">
        <property type="protein sequence ID" value="KFM20317"/>
        <property type="gene ID" value="AAA799P11_00064"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.62"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028229">
        <property type="entry name" value="Integrase_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14882">
        <property type="entry name" value="PHINT_rpt"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="192" mass="23111" checksum="7980B1AF08E9C53E" modified="2014-10-29" version="1">MALKFKSFNDARSYVHGLQLKNEREWISFCKSKKKPNDIPSVPRHHYTKEWKGLGDWLGTYTIAPQNKKFRSFKQARRFIHSLNLKSYYDWLEFCKSNKKPKDIPSVPRQYYTKEWKGFGDWLGTYTIAPQNKKFRSFKQARRFARKLKLNSYFAWVQYYKTNALPTDIPTTPNRTYKNKGWKGWNDWLGTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L9</accession>
    <name>A0A087S3L9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20323">
        <property type="protein sequence ID" value="KFM20323"/>
        <property type="gene ID" value="AAA799P11_00070"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="17001" checksum="F62FFECE97CB686D" modified="2014-10-29" version="1">MFAKWIPMDSMISLPGLFLTEKITALSQVKQVVMQSGVPMNLYHAPMDAFIAGGLWHIWNGATFGIIYALIIGKGRWWYGMIWAVIIEITMMLAPYLIAMKGPFGIEHMDGYNIFTITLVAHLLFGAVLGILVQKWKKDNNSILNLNKEVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M4</accession>
    <name>A0A087S3M4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Tyrosine recombinase XerC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xerC</name>
        <name evidence="4" type="ORF">AAA799P11_00075</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20328">
        <property type="protein sequence ID" value="KFM20328"/>
        <property type="gene ID" value="AAA799P11_00075"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.72"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="103"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="302"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="350" mass="41328" checksum="06D1BC2E49CBB9C1" modified="2014-10-29" version="1">MKERSILRFEQGIKSRQTLNNYRDHLKNFRNFAKFESFDGLIAKPVEEIQTLVEDYLIHLKENRHPNSIPILFLGVRHFFVMNRIPLYWDIIRKMYPPKIKSAGFKPWTTQQIQRMLAATTSKRNRAIVHFLASTGARIGVIDGNFTLKYIHDMPEGCKAVLLYPNDNEEYWAFLTPEATQALDEYHEERRQKGEELTDDSPVFRRDYSCGKKILPMQRSGVISVMYRVINNAGLERTKVNHHFDTQMDHGFRKRFNTILKLKNSVNSNVAEKLLGHKNGLDGVYLKPTREQCFAEFRKAIVELMIDDSERQRLKIKQLEREKSELEHYRTKVDELWQDKLRMEHIQNSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P1</accession>
    <name>A0A087S3P1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00092</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20345">
        <property type="protein sequence ID" value="KFM20345"/>
        <property type="gene ID" value="AAA799P11_00092"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.89"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="125" mass="14695" checksum="B9BABFF51299DB2B" modified="2014-10-29" version="1">MKLDPELKLQILEKVGIYSNRFSIPEPTILLTTKEVLDAPKEMTEGRRTSAYKYYGVSYLQHNLVFINVRKIPDEKILENTIVHELIHMRFPYLAHGKRFNKLVRQGLRGKSFLPYRKRSKAHAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P2</accession>
    <name>A0A087S3P2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GTP-dependent dephospho-CoA kinase</fullName>
            <ecNumber evidence="3">2.7.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Dephospho-coenzyme A kinase</fullName>
            <shortName evidence="3">DPCK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00093</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the GTP-dependent phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>3'-dephospho-CoA + GTP = CoA + GDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:61156"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57328"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; coenzyme A biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GTP-dependent DPCK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.-" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20346">
        <property type="protein sequence ID" value="KFM20346"/>
        <property type="gene ID" value="AAA799P11_00093"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.90"/>
    <dbReference type="UniPathway" id="UPA00241"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00590">
        <property type="entry name" value="Dephospho_CoA_kinase_GTP_dep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007164">
        <property type="entry name" value="GTP-dep_dephospho-CoA_kin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40732">
        <property type="entry name" value="PTHR40732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04019">
        <property type="entry name" value="DUF359"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006533">
        <property type="entry name" value="UCP006533"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="1 3" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="154" mass="17099" checksum="123E0F06088193E5" modified="2014-10-29" version="1">MKIPLGILLPENQADKKNILKHIEQNSYIITVGDRTTEKMIGYDLTPSLQIVDGIEKREKREPPKLANATEITVDNPAAEITSQSIDVIKKAFSMESPIRILVTGEEDLLVLPVCIHAPENSVVLYGQPNEGLVIVKITSEIRNKAQSLLDLME</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S3</accession>
    <name>A0A087S3S3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L31e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpl31e</name>
        <name evidence="7" type="ORF">AAA799P11_00124</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL31 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the ribosomal protein L31e family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20377">
        <property type="protein sequence ID" value="KFM20377"/>
        <property type="gene ID" value="AAA799P11_00124"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.122"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00410">
        <property type="entry name" value="Ribosomal_L31e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000054">
        <property type="entry name" value="Ribosomal_L31e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023621">
        <property type="entry name" value="Ribosomal_L31e_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10956">
        <property type="entry name" value="PTHR10956"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01198">
        <property type="entry name" value="Ribosomal_L31e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01380">
        <property type="entry name" value="Ribosomal_L31e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54575">
        <property type="entry name" value="SSF54575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="81"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="89"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="147" mass="17195" checksum="3FEFAA99D95D9DEF" modified="2014-10-29" version="1">MSQELERVYTIPLGKVLLSQSQHRAVRAINMIKEFARHHMKVEDIKIEEDLAHQIWAKGIRSPPRKIRVRMSKTDEGYVLVSPYEEEIESSVTPEKETPKVEDKVEEPAKEEPKKENKVEEPAKEEPKKENKVEEPAKEEPKKEEKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T0</accession>
    <name>A0A087S3T0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00131</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20384">
        <property type="protein sequence ID" value="KFM20384"/>
        <property type="gene ID" value="AAA799P11_00131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8809" checksum="E22D9B7D704C4286" modified="2014-10-29" version="1">MKSMVFNILVTCDDGKRDYAIERLKEFQDIKNIQERKNKNELFAEVQSDDKDYVTTNVVQRIQAIEGITDASIPPM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RM95</accession>
    <name>A0A087RM95_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transposase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01532</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000109">
        <property type="protein sequence ID" value="KFM14599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14599">
        <property type="protein sequence ID" value="KFM14599"/>
        <property type="gene ID" value="AAA799P11_01532"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="9085" checksum="8463A7AAB051B37F" modified="2014-10-29" version="1" fragment="single">ISTHLDETAIEQIVQCYADKGYDAKYIREYLKSRNIADYIPYRNYKTRCNETNNQNNYNKTRYVVERFFAWLKCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNU2</accession>
    <name>A0A087RNU2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SMC domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01513</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000093">
        <property type="protein sequence ID" value="KFM15146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15146">
        <property type="protein sequence ID" value="KFM15146"/>
        <property type="gene ID" value="AAA799P11_01513"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="115" mass="12995" checksum="FCE4FC49DBEEBC89" modified="2014-10-29" version="1" fragment="single">EIALAKMGEIKKRIDELEEERNQKLRHDILERELNRYKAISAANKLKVISSQKESKESTLHSVTAEITTFDGERSVLRTEIGTLESEKSKLMAEANDYTQAKSALDAEIATAMEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RP67</accession>
    <name>A0A087RP67_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nucleotide binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000091">
        <property type="protein sequence ID" value="KFM15271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15271">
        <property type="protein sequence ID" value="KFM15271"/>
        <property type="gene ID" value="AAA799P11_01510"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="38" mass="4376" checksum="6B61A57F38B643EF" modified="2014-10-29" version="1" fragment="single">MDFRILDASAFYAGVPFRSSSDCYTTSLVYDEIKHIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPU4</accession>
    <name>A0A087RPU4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000086">
        <property type="protein sequence ID" value="KFM15498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15498">
        <property type="protein sequence ID" value="KFM15498"/>
        <property type="gene ID" value="AAA799P11_01500"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1386"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="46"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="14171" checksum="F9D3F9DE9609A6CB" modified="2014-10-29" version="1">MFFILSLSWHKIPFSGRQEYFAFVMANXXXXXXXXXXXXXXXGGLTRLKIISKLKENPLNTNQLANELGLDYKAIQHHIKVLEKNNLITKAGEKYGIMFFISTFLEVNMETFEEIEGKLDKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQ45</accession>
    <name>A0A087RQ45_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GAF sensor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01493</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000082">
        <property type="protein sequence ID" value="KFM15599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15599">
        <property type="protein sequence ID" value="KFM15599"/>
        <property type="gene ID" value="AAA799P11_01493"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1384"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13185">
        <property type="entry name" value="GAF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAF" evidence="1">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="8945" checksum="0B2782D88159D740" modified="2014-10-29" version="1" fragment="single">NDVIHDPRIKYHDWAKKEKLKSFAGYPLIYNKKVVAVLALFSKKQFSPSDFEILGMFSDQISKELTGFFEAKDFLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQZ0</accession>
    <name>A0A087RQZ0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-hydroxymuconate tautomerase protein</fullName>
            <ecNumber evidence="2">5.3.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aphI</name>
        <name evidence="2" type="ORF">AAA799P11_01462</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.2.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000066">
        <property type="protein sequence ID" value="KFM15894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15894">
        <property type="protein sequence ID" value="KFM15894"/>
        <property type="gene ID" value="AAA799P11_01462"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1371"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.429.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004370">
        <property type="entry name" value="4-oxalocrotonate_tautomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014347">
        <property type="entry name" value="Tautomerase/MIF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01361">
        <property type="entry name" value="Tautomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55331">
        <property type="entry name" value="SSF55331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tautomerase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="58" mass="6651" checksum="C8171112FE013428" modified="2014-10-29" version="1">MPLITVSMYPGRSQEQKDEYAKAITKSAVEILKTKENHVIVVFEDNPKENWFLAGNQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RR24</accession>
    <name>A0A087RR24_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01458</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000064">
        <property type="protein sequence ID" value="KFM15928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15928">
        <property type="protein sequence ID" value="KFM15928"/>
        <property type="gene ID" value="AAA799P11_01458"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1369"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="36" mass="3500" checksum="3E3A946137546AF2" modified="2014-10-29" version="1">MAEAGMAAYGAAAGVAIALAVVCFALRGKGHPEPLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSG2</accession>
    <name>A0A087RSG2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000051">
        <property type="protein sequence ID" value="KFM16416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16416">
        <property type="protein sequence ID" value="KFM16416"/>
        <property type="gene ID" value="AAA799P11_01435"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="11"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="78" mass="9395" checksum="27E5EC75E77360A9" modified="2014-10-29" version="1" fragment="single">LQKFNNSQIKQKQLSQEITEIRVNYSNLEEDISNDQTRIMKILEEQHVQDMDDFVRNYEHDPELKLVWNLGIPVFEMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUF8</accession>
    <name>A0A087RUF8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01382</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000037">
        <property type="protein sequence ID" value="KFM17112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17112">
        <property type="protein sequence ID" value="KFM17112"/>
        <property type="gene ID" value="AAA799P11_01382"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1312"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="43" mass="4996" checksum="C44E92FD61715297" modified="2014-10-29" version="1">MMILNEINSYEETLDPEFCEVIVEKIDLFNDSCEPQIEILDCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUU0</accession>
    <name>A0A087RUU0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative nickel-responsive regulator 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01362</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transcriptional regulatory CopG/NikR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17244">
        <property type="protein sequence ID" value="KFM17244"/>
        <property type="gene ID" value="AAA799P11_01362"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1297"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027271">
        <property type="entry name" value="Acetolactate_synth/TF_NikR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013321">
        <property type="entry name" value="Arc_rbn_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002145">
        <property type="entry name" value="CopG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014864">
        <property type="entry name" value="TF_NikR_Ni-bd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08753">
        <property type="entry name" value="NikR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01402">
        <property type="entry name" value="RHH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RHH_1" evidence="5">
        <location>
            <begin position="4"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="NikR_C" evidence="6">
        <location>
            <begin position="61"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="127" mass="14215" checksum="BA922A1DB7F50345" modified="2014-10-29" version="1">MPIVSISLNDEILSELDKLQSSMGFSGRSEAIRAGIRAFVSEEKQKSDLSGNIHAILLVVHNDEFDHIVSGITHNFEDLITTHLHSKIEKEKCMELFVIDGDAEKVSTMTKDFQTNKNMDTVRLVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUU4</accession>
    <name>A0A087RUU4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Aspartate carbamoyltransferase regulatory chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">pyrI</name>
        <name evidence="10" type="ORF">AAA799P11_01366</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 7">Involved in allosteric regulation of aspartate carbamoyltransferase.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Contains catalytic and regulatory chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the PyrI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17248">
        <property type="protein sequence ID" value="KFM17248"/>
        <property type="gene ID" value="AAA799P11_01366"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1301"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009347">
        <property type="term" value="C:aspartate carbamoyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006221">
        <property type="term" value="P:pyrimidine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00002">
        <property type="entry name" value="Asp_carb_tr_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020545">
        <property type="entry name" value="Asp_carbamoyltransf_reg_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002801">
        <property type="entry name" value="Asp_carbamoylTrfase_reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020542">
        <property type="entry name" value="Asp_carbamoyltrfase_reg_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036792">
        <property type="entry name" value="Asp_carbatrfase_reg_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036793">
        <property type="entry name" value="Asp_carbatrfase_reg_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35805">
        <property type="entry name" value="PTHR35805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01948">
        <property type="entry name" value="PyrI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02748">
        <property type="entry name" value="PyrI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54893">
        <property type="entry name" value="SSF54893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57825">
        <property type="entry name" value="SSF57825"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00240">
        <property type="entry name" value="ATCase_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 7" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PyrI" evidence="8">
        <location>
            <begin position="6"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="PyrI_C" evidence="9">
        <location>
            <begin position="102"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM17248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="153" mass="17388" checksum="C8943BEAD08A1CD0" modified="2014-10-29" version="1">MEQSELMVRRIKEGTVIDHIDEGKGLQVLNALRIDGKDGSLITIALNVPSGKFKKKDIIKVENKFLKDDDTNKIAVIAPKATINMIKDYKLVEKRRVSLPNEIDKIFRCSNPDCITNSAEHIESIMDVIDKEGTVLKCRYCARILDVNRIDYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ0</accession>
    <name>A0A087RVJ0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01326</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17494">
        <property type="protein sequence ID" value="KFM17494"/>
        <property type="gene ID" value="AAA799P11_01326"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1266"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="116" mass="12475" checksum="2947F771349F131F" modified="2014-10-29" version="1">MKSLAFLALFVLAIGVISTNQAFAEPLDVVSTSVSNYNGDSATVKITWNNDSSAKNYKVGCVSCTPNVVEITTGNNITIHNVTPFPNGSYALLYVISYDSQNNIITAKQLIVNLNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW3</accession>
    <name>A0A087RWW3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-phenylhydantoinase protein</fullName>
            <ecNumber evidence="2">3.5.2.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hyuA</name>
        <name evidence="2" type="ORF">AAA799P11_01280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17967">
        <property type="protein sequence ID" value="KFM17967"/>
        <property type="gene ID" value="AAA799P11_01280"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1223"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004157">
        <property type="term" value="F:dihydropyrimidinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="52"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="466" mass="51205" checksum="897621E5E911EF43" modified="2014-10-29" version="1">MTYDTVIVDSHVILPQGMVDKNIIIDEGKVVGLTNELPACDTKINGNGLISVPGPIDTHVHYGVYSPINEAAKTESHAAAIGGVTTMMRMLRLGDPFSSSLQAQLDAASQNHYVDYAIHASIFTPQQINEMDYCVNKGITSFKIYMNLGGEIGHVYMDMPPNSSELVAANVDVTDEIVEQTVKTAASLGCPVLVHAEDYESCGCGIQTAREKKQDGLSAWSESRSPEFEAKAIKTVSKFGRDYDCVIYFVHIGSEQALKQIQEEKKLGTKIFVETCPHYLTLSYEKQDGYLAKVMPPIRTENDRKAVWGALSTNQIDTIGTDHVANQLKLKLGGDDVWSALAGFPGIGTVLPIVLNDGVNQNKITLEQFVRFTSKNAAQIFGMYPQKGTLEKNSDADVTMIDLRKEKKVTSELFGGFSDYIVYEGRNLKGWPVKTIVRGELVAEDFEVIGKLGHGKLVQRNIDRNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX03</accession>
    <name>A0A087RX03_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01239</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18007">
        <property type="protein sequence ID" value="KFM18007"/>
        <property type="gene ID" value="AAA799P11_01239"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1195"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11518" checksum="54FAEFB53CE08894" modified="2014-10-29" version="1">MNKDPDRIESLVSEKRVKLHIFEPSQRKIWTVVGKGEEHWVDPSGIYCSCPGFYFGKLNGKETCYHLDSVKFAQNENKVEKIIFSDDEFSDFLSGLLSDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX08</accession>
    <name>A0A087RX08_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SnoaL-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01244</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18012">
        <property type="protein sequence ID" value="KFM18012"/>
        <property type="gene ID" value="AAA799P11_01244"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1200"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13474">
        <property type="entry name" value="SnoaL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="9"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="134" mass="15166" checksum="46B5D56687B1517B" modified="2014-10-29" version="1">MSDSEEIIKVIEALFQAGITKDTSILKDIHLNDPKFSSFSDLPPYDLKDYQNTIELEELKFVSISDYSYEIKNPKISIFGDSAVVAMELNQKGMLVDTKAYTGEHMEIQGRATFVLVKQPTWKIAHIHLSKING</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX10</accession>
    <name>A0A087RX10_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Acetolactate synthase small subunit</fullName>
            <shortName evidence="6">AHAS</shortName>
            <shortName evidence="6">ALS</shortName>
            <ecNumber evidence="6">2.2.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Acetohydroxy-acid synthase small subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ilvH</name>
        <name evidence="8" type="ORF">AAA799P11_01246</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Dimer of large and small chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the acetolactate synthase small subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18014">
        <property type="protein sequence ID" value="KFM18014"/>
        <property type="gene ID" value="AAA799P11_01246"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1202"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990610">
        <property type="term" value="F:acetolactate synthase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04878">
        <property type="entry name" value="ACT_AHAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004789">
        <property type="entry name" value="Acetalactate_synth_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027271">
        <property type="entry name" value="Acetolactate_synth/TF_NikR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019455">
        <property type="entry name" value="Acetolactate_synth_ssu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039557">
        <property type="entry name" value="AHAS_ACT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30239">
        <property type="entry name" value="PTHR30239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10369">
        <property type="entry name" value="ALS_ss_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00119">
        <property type="entry name" value="acolac_sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 6" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="7">
        <location>
            <begin position="4"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="161" mass="18214" checksum="D30B70B3C2E86950" modified="2014-10-29" version="1">MWAILSLLVENKPGILFKVTHLFRARDFNIDSISVGVTENPEYSKMTITTYGDEKQIDQIVKQLDKMIDTVKVERLDEHKTVYRELSIFKIKLSNANDSMEVNKLANAYGGKVHDVKKESIMVELTATPDQIKAFEELAKPFRILDVARTGVAALQRSGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI0</accession>
    <name>A0A087RXI0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ribosomal RNA small subunit methyltransferase Nep1</fullName>
            <ecNumber evidence="5">2.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">16S rRNA (pseudouridine-N1-)-methyltransferase Nep1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">nep1</name>
        <name evidence="6" type="ORF">AAA799P11_01215</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a pseudouridine in 16S/18S rRNA + S-adenosyl-L-methionine = an N(1)-methylpseudouridine in 16S/18S rRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:46696"/>
            <dbReference type="Rhea" id="RHEA-COMP:11633"/>
            <dbReference type="Rhea" id="RHEA-COMP:11634"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:74890"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase NEP1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18184">
        <property type="protein sequence ID" value="KFM18184"/>
        <property type="gene ID" value="AAA799P11_01215"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1168"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070037">
        <property type="term" value="F:rRNA (pseudouridine) methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18088">
        <property type="entry name" value="Nep1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00554">
        <property type="entry name" value="NEP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005304">
        <property type="entry name" value="Rbsml_bgen_MeTrfase_EMG1/NEP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023503">
        <property type="entry name" value="Ribosome_NEP1_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12636">
        <property type="entry name" value="PTHR12636"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03587">
        <property type="entry name" value="EMG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="3 5" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="5">
        <location>
            <begin position="198"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="site" description="Interaction with substrate rRNA" evidence="5">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <feature type="site" description="Stabilizes Arg-xx" evidence="5">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with substrate rRNA" evidence="5">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with substrate rRNA" evidence="5">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="222" mass="25307" checksum="0DE46A4B453FE08E" modified="2014-10-29" version="1">MISIVLAESALELVPSDLKHHPSVVSHARKLGKLSSEILLDNSWHFAAMKGINNELKRGRPDLVHFSILEATTLPLYLKNKIKLYVHTIDDKVIYFGQNVHVPKSYHRFAGLIEKLYKEKKITANDDTLLEIKNKTFSELIDEIHPSKIIGLSTKGTKNSYEKIAGEINDDYCLVFGGFQKGHFSDSIEKQFAQMYSIGDESFEGHTVVARMLYEYEKTIFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM5</accession>
    <name>A0A087RXM5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">rps3</name>
        <name evidence="10" type="ORF">AAA799P11_01146</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Binds the lower part of the 30S subunit head.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the universal ribosomal protein uS3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18229">
        <property type="protein sequence ID" value="KFM18229"/>
        <property type="gene ID" value="AAA799P11_01146"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1107"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.32">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01309_A">
        <property type="entry name" value="Ribosomal_S3_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004044">
        <property type="entry name" value="KH_dom_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027488">
        <property type="entry name" value="Ribosomal_S3_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001351">
        <property type="entry name" value="Ribosomal_S3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036419">
        <property type="entry name" value="Ribosomal_S3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005703">
        <property type="entry name" value="Ribosomal_S3_euk/arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07650">
        <property type="entry name" value="KH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00189">
        <property type="entry name" value="Ribosomal_S3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54821">
        <property type="entry name" value="SSF54821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01008">
        <property type="entry name" value="uS3_euk_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50823">
        <property type="entry name" value="KH_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="KH type-2" evidence="9">
        <location>
            <begin position="17"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="197"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="251" mass="28081" checksum="BA9834DEE05B9131" modified="2014-10-29" version="1">MSSVKNVIKDNYNMMLLKDYLRDAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGSGIRELTDKLATDFGLKNPQISVVEIEKPELSPSVMCNRMASHLERGTAFRRATMWTLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHVNTAMGLIGIRIRIARKEKFVPEFEMKVEKPKKAKQVKDAETGKMRDETAAEKKARTESEQIAMEEEKMKELETLEEEEAKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP0</accession>
    <name>A0A087RXP0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01166</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18244">
        <property type="protein sequence ID" value="KFM18244"/>
        <property type="gene ID" value="AAA799P11_01166"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="41" mass="4513" checksum="7F0E2A25C03B75AA" modified="2014-10-29" version="1">MELDSILNMELIIGPATELADKMMDSTIMLVDKLMSSVLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ8</accession>
    <name>A0A087RXQ8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01184</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18262">
        <property type="protein sequence ID" value="KFM18262"/>
        <property type="gene ID" value="AAA799P11_01184"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1141"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="51" mass="5784" checksum="DDC2D3C4402C8091" modified="2014-10-29" version="1">MGDRITVVLKAEHTEKLRNIQAKMIRNSTKSVSFSHVLNLVLSEGLKKYKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ8</accession>
    <name>A0A087RXZ8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribonuclease J protein</fullName>
            <ecNumber evidence="4">3.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01127</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18352">
        <property type="protein sequence ID" value="KFM18352"/>
        <property type="gene ID" value="AAA799P11_01127"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042173">
        <property type="entry name" value="RNase_J_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Lactamase_B" evidence="3">
        <location>
            <begin position="14"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="469" mass="52961" checksum="9C850201E8FE9654" modified="2014-10-29" version="1">MTSLTFYGGVNEIGGNKILLQDKDTKVFLDFGMSFGKNAKFFEEFITPRVSNGIVDYLTMGLIPDIPGVYRDDLMEMAGRKPENTDIDAVLLTHAHADHANYISFLNKDIPIHMGAGCHYILKALADRGARSLDSEILDYKERPTSEHRGEKPIPRTIKEFRTGDKFKVGDLEVEPIHVDHSVPGAYGFIIYTSEGPVVYTGDIRLHGTHPEMTEDFVAKAKEVRPIALISEGTRIADKEKEESEQLVYQQCSKTVSESNRLVFADFNFKDVDRFQTFYKIAQETGRKLVVKINDAHFLKYLSQDKHLNVPNIDDEHIVIYLPKKNSGTYSDSDYSANEREFLNLNNTWTADQIAAKENKVLCCMGFYSFTSLIDIKPKPGATYIHSASEPYNEGQVISSDRADAWIEHFGMERVQSHCSGHARGRDLLEAVGEIDAKTLFPVHTEHPDAYNKVSKNITMIEEGVKYNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY27</accession>
    <name>A0A087RY27_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Radical SAM core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">ytqA</name>
        <name evidence="14" type="ORF">AAA799P11_01094</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + H2O + S-adenosyl-L-methionine + uridine(34) in tRNA = 5'-deoxyadenosine + carboxymethyluridine(34) in tRNA + CoA + 2 H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:61020"/>
            <dbReference type="Rhea" id="RHEA-COMP:10407"/>
            <dbReference type="Rhea" id="RHEA-COMP:11727"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74882"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="1">
            <dbReference type="Rhea" id="RHEA:61021"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">tRNA modification.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ELP3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18381">
        <property type="protein sequence ID" value="KFM18381"/>
        <property type="gene ID" value="AAA799P11_01094"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1055"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00094"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039661">
        <property type="entry name" value="ELP3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034687">
        <property type="entry name" value="ELP3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032432">
        <property type="entry name" value="Radical_SAM_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11135">
        <property type="entry name" value="PTHR11135"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11135:SF0">
        <property type="entry name" value="PTHR11135:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16199">
        <property type="entry name" value="Radical_SAM_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005669">
        <property type="entry name" value="Hist_AcTrfase_ELP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00344">
        <property type="entry name" value="ELP3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01211">
        <property type="entry name" value="ELP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9 12" id="KW-0408">Iron</keyword>
    <keyword evidence="10 12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Radical SAM core" evidence="13">
        <location>
            <begin position="74"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR005669-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="KFM18381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="527" mass="60163" checksum="07841FC46F7839BA" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY37</accession>
    <name>A0A087RY37_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ferritin-2 protein</fullName>
            <ecNumber evidence="2">1.16.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ftnB</name>
        <name evidence="2" type="ORF">AAA799P11_01104</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.16.3.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18391">
        <property type="protein sequence ID" value="KFM18391"/>
        <property type="gene ID" value="AAA799P11_01104"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1065"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004322">
        <property type="term" value="F:ferroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006879">
        <property type="term" value="P:cellular iron ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006826">
        <property type="term" value="P:iron ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01055">
        <property type="entry name" value="Nonheme_Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001519">
        <property type="entry name" value="Ferritin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009040">
        <property type="entry name" value="Ferritin-like_diiron"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008331">
        <property type="entry name" value="Ferritin_DPS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041719">
        <property type="entry name" value="Ferritin_prok"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11431">
        <property type="entry name" value="PTHR11431"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00210">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50905">
        <property type="entry name" value="FERRITIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ferritin-like diiron" evidence="1">
        <location>
            <begin position="1"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="171" mass="18998" checksum="6709FBF6B1060AAE" modified="2014-10-29" version="1">MRISTKMKKALNDQIALEAAASNSYLAMASWCEVTGYQGGADYFYAQSDEEKTHMLKIIHYLNDIGANATIPTVKAPPSSYKSLEGVIKAALKNEQSVTKAIHKIVELSHKEKDHCTYAFLEWFVNEQVQEETKFETILQKFDLLGRDKLGINEVDKFLAAEAGDSSSTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY41</accession>
    <name>A0A087RY41_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01108</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18395">
        <property type="protein sequence ID" value="KFM18395"/>
        <property type="gene ID" value="AAA799P11_01108"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1069"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="16452" checksum="5CF3C3BE8303206C" modified="2014-10-29" version="1">MKPNQQLLRINRSFLICFIISALLSATFAQMLVDYDSFLTTTFTIIFGYAVYFGIFSGLFYWDNKERYKSMRKELIRRELLALVSSFGVGEIVYLGIRWPTFYYFLEISIEPFLASLVSEIIATACYMASVTLFLRKTKTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK8</accession>
    <name>A0A087RYK8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Che A protein Kinase Sensory transduction transferase Two-component regulatory system</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cheA</name>
        <name evidence="3" type="ORF">AAA799P11_01049</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18562">
        <property type="protein sequence ID" value="KFM18562"/>
        <property type="gene ID" value="AAA799P11_01049"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008207">
        <property type="entry name" value="Sig_transdc_His_kin_Hpt_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01627">
        <property type="entry name" value="Hpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50894">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HPt" evidence="2">
        <location>
            <begin position="19"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphohistidine" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="138" mass="15170" checksum="296CE03591C587EA" modified="2014-10-29" version="1">MKKLSSIEYKSNGQILAVGIVMSEEFIKLATKEINEEILGIGNILNSCSDDSTIFQNSDKLQRHTHKIKGLAPMMGKETMGTLATVLDDILKQVVAGKTPQGIFDVITLSHAELVQNMNNNSNLEPTIVKVKNLLNDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ58</accession>
    <name>A0A087RZ58_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00971</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18762">
        <property type="protein sequence ID" value="KFM18762"/>
        <property type="gene ID" value="AAA799P11_00971"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="29" mass="3318" checksum="2E0B4FF0C993C58A" modified="2014-10-29" version="1">MIEEKKKFSWIPGAIIIGFLVLVAVLFVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB5</accession>
    <name>A0A087RZB5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Matrix metalloproteinase-1 interstitial collagenase</fullName>
            <ecNumber evidence="4">3.4.24.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00940</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.7" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18819">
        <property type="protein sequence ID" value="KFM18819"/>
        <property type="gene ID" value="AAA799P11_00940"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021190">
        <property type="entry name" value="Pept_M10A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00138">
        <property type="entry name" value="MATRIXIN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M10" evidence="3">
        <location>
            <begin position="235"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="345" mass="39004" checksum="C84F8CA06AB9C89C" modified="2014-10-29" version="1">MLQKKSDEFEQLYEKYDKLKMKVKELSQENQIYSHMCKKIETNSKDLKKSQSNLKKQLDQKLHSQLESEQEKLLLEKQLERSESSSKKSQKKYYVALVMAALSIAIISGAYSIMFAELAGQQYKIEVTPKPTGYTIQNLRGDTINTFLSWRLVPGDTLRVNIINSDNYDPEKIEVIKKTILSEKQLEIDNSLMHKGPKGTTSILYEGWLGALNDASKTDTNLFVPTNIEVIESNNGEGDITIELTNRKNADGFAGWTNSIADDSQNQILKSRITIFAVDSLSLAELETIVRHEMGHALGLAHSTDPEDLMYPTIQTNFPYISECDVDAIESLYDGQNTSEVICEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC6</accession>
    <name>A0A087RZC6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcription initiation factor IIB 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tfbA</name>
        <name evidence="5" type="ORF">AAA799P11_00951</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18830">
        <property type="protein sequence ID" value="KFM18830"/>
        <property type="gene ID" value="AAA799P11_00951"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CYCLIN" evidence="4">
        <location>
            <begin position="127"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="CYCLIN" evidence="4">
        <location>
            <begin position="221"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="307" mass="34820" checksum="ED7704EF487186AE" modified="2014-10-29" version="1">MLMVIENIVQKLDMCKEKFPCSEGIVITDLETGEVFCQKCGIVQNNSQDRKNSALFSNDDFALRNGSKTSLRLYDMGLSTNVGNLNHDSTGKPVDYKMKNNMKRMRLWDSRSKTKNSSGRNLKTALVEIEKLKEKLTLTDTVAERSAYIYRKAAKYGLIRGRSVKDMSAACVYMACREFDVSRTILDISNKLQVKRNAVAKNYRLLFQNLRLNVSVPDPIKCIIKISNNLQTSESTKREAIRIFDNLKKLELIAGKKPDAVAATIIYMASIKTGENLTQQKISKISGITGVTIRNRFSEYRKYVQLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZD0</accession>
    <name>A0A087RZD0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18834">
        <property type="protein sequence ID" value="KFM18834"/>
        <property type="gene ID" value="AAA799P11_00955"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="71" mass="8198" checksum="CA91F722990A416B" modified="2014-10-29" version="1">MKYLFVIFLLLTVASMGYVSAAHAHPHATPELMQSHSHDPNDANFQEEFILHDFEHVIISTFEWLKNILFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG3</accession>
    <name>A0A087RZG3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Low conductance mechanosensitive channel YnaI protein</fullName>
            <ecNumber evidence="8">5.4.2.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ynaI</name>
        <name evidence="8" type="ORF">AAA799P11_00898</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.11" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18867">
        <property type="protein sequence ID" value="KFM18867"/>
        <property type="gene ID" value="AAA799P11_00898"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.860"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045275">
        <property type="entry name" value="MscS_archaea/bacteria_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30221">
        <property type="entry name" value="PTHR30221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="188" mass="20723" checksum="563A99EC9D2F2C92" modified="2014-10-29" version="1">MLVAGGIFGVVIGFATQSVVSNLISGIFLMIEKPVRQGDSVEIPAENISGTLIDISTFSVRVRQFDGTLIRIPNEKFFTSNIRSLTSSLVRRSQGIVGIAYKEDIDGAILVLQKAIAQLMPFVLVEPAPEFRISELGDSSVNIEILVWHPREDWGEVQPKLLKIAKNALDEAGIEIPFPQRVIWHGKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH1</accession>
    <name>A0A087RZH1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00906</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18875">
        <property type="protein sequence ID" value="KFM18875"/>
        <property type="gene ID" value="AAA799P11_00906"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="7144" checksum="9FB95EC014CDC13F" modified="2014-10-29" version="1">MDKTILFAGIALVGLGGGFLTAQNFDASLHSAFATGGYLWLAMGGITIGLGLKVKKEKQKQQMMGALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH7</accession>
    <name>A0A087RZH7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00912</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18881">
        <property type="protein sequence ID" value="KFM18881"/>
        <property type="gene ID" value="AAA799P11_00912"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="60" mass="6815" checksum="784FE9BF27DE35BB" modified="2014-10-29" version="1">MGRTCRGICEMHKAGLAPNKIRYEIGQKRCTFCGIFLAIDDPRCICCKAVLRTKPRSKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH9</accession>
    <name>A0A087RZH9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00914</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18883">
        <property type="protein sequence ID" value="KFM18883"/>
        <property type="gene ID" value="AAA799P11_00914"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.877"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="119" mass="13810" checksum="8FAA3E91C0045EBF" modified="2014-10-29" version="1">MENFENFYHDLVDLAKKYETKNIPLKIEKDLENDIIKIFGEKITSLARAKNGLNDVAELSYTVAEHHPYWNLLYNCSEIATSVLEKWKDSLSDEDLSDIEWAIKELTQSLEKIKSNVDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI2</accession>
    <name>A0A087RZI2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional protein BirA</fullName>
            <ecNumber evidence="2">6.3.4.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">birA</name>
        <name evidence="2" type="ORF">AAA799P11_00917</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.15" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18886">
        <property type="protein sequence ID" value="KFM18886"/>
        <property type="gene ID" value="AAA799P11_00917"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.880"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004077">
        <property type="term" value="F:biotin-[acetyl-CoA-carboxylase] ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16442">
        <property type="entry name" value="BPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00978">
        <property type="entry name" value="Bifunct_BirA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030855">
        <property type="entry name" value="Bifunct_BirA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004408">
        <property type="entry name" value="Biotin_CoA_COase_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03099">
        <property type="entry name" value="BPL_LplA_LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00121">
        <property type="entry name" value="birA_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="1">
        <location>
            <begin position="86"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="335" mass="37266" checksum="40613D8EF6214F6F" modified="2014-10-29" version="1">MIYNSFDNPGLVKVLTFLQTHNTEYLSGQDLSDVLHISRVAVWKHIKKIQELGYTVESKQKLGYKLTKNSDALLPWEITSGLKTKTIGQQAFYFDSTDSTQSQALKMAEEPENNGAIIVAEKQTGGRGRSGRKWISPKGGIWFSVILHPKFDISITTLFPIASALALSIALEKTFNISPELKWPNDITIKGKKLAGMLVDVSLESNKIENLVLGVGINFDVDVNQIEKNLKGTPNFYGVASLNKQKAKIRPVELVQSFLIELEKIYKSLEAKQTRKIISEWTKRSSTIGKNLKLNTIDGEIKGKALRIDEDGALVVSNNKNSNRVIAGEIIHVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI9</accession>
    <name>A0A087RZI9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Poly(3-hydroxyalkanoate) polymerase subunit PhaC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">PHB synthase subunit PhaC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phbC</name>
        <name evidence="6" type="ORF">AAA799P11_00924</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Biopolymer metabolism; poly-(R)-3-hydroxybutanoate biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18893">
        <property type="protein sequence ID" value="KFM18893"/>
        <property type="gene ID" value="AAA799P11_00924"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.887"/>
    <dbReference type="UniPathway" id="UPA00917"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042619">
        <property type="term" value="P:poly-hydroxybutyrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010125">
        <property type="entry name" value="PHA_synth_III_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01836">
        <property type="entry name" value="PHA_synth_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-0583">PHB biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="5">
        <location>
            <begin position="68"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="354" mass="40685" checksum="7657B127EBDD567B" modified="2014-10-29" version="1">MQSESKIDPKIIEEILKFGKNVIEAPKLVSAPDEISLEVTPHELVQQMDKTRLLHYKPITEKQHKTPLLISYALINRFHILDIQPEKSWVRNLLQQGFDIYMLDWGTPTSMDKYLDFDDYVNGYLDAYVEYIKNETSTDKISLQGYCTGATIATAYASLHPESVKNYIATAPVIDGWRDTTVISNLAKHMDVDKMVEIIGNMPPEFMYYAFSVLKPFEQGIEKYVNFFKNIENKKFVDSFLRVEKWLGDTPPIPGELFRQWIKDIYQENLLIQNKMHIEGQLVDLKKIDMPIFTQVAVGDHLVSPECSMPLHYAVGSEDKTLRMYPTGHVGMIASSLSQKKVLPELGQWLAERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM0</accession>
    <name>A0A087RZM0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NAD(P)H-hydrate epimerase</fullName>
            <ecNumber evidence="1">5.1.99.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">NAD(P)HX epimerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 4" type="primary">nnrE</name>
        <name evidence="4" type="ORF">AAA799P11_00865</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6R)-NADHX = (6S)-NADHX</text>
            <dbReference type="Rhea" id="RHEA:32215"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:64075"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6R)-NADPHX = (6S)-NADPHX</text>
            <dbReference type="Rhea" id="RHEA:32227"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:64077"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="1">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NnrE/AIBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.99.6" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18924">
        <property type="protein sequence ID" value="KFM18924"/>
        <property type="gene ID" value="AAA799P11_00865"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.831"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052856">
        <property type="term" value="F:NADHX epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052857">
        <property type="term" value="F:NADPHX epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01966">
        <property type="entry name" value="NADHX_epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013283">
        <property type="entry name" value="RLI1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007209">
        <property type="entry name" value="RNaseL-inhib-like_metal-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004443">
        <property type="entry name" value="YjeF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036652">
        <property type="entry name" value="YjeF_N_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19248">
        <property type="entry name" value="PTHR19248"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00037">
        <property type="entry name" value="Fer4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04068">
        <property type="entry name" value="RLI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03853">
        <property type="entry name" value="YjeF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01868">
        <property type="entry name" value="ABCEFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64153">
        <property type="entry name" value="SSF64153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00197">
        <property type="entry name" value="yjeF_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51385">
        <property type="entry name" value="YJEF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0520">NAD</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0630">Potassium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="2">
        <location>
            <begin position="43"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="YjeF N-terminal" evidence="3">
        <location>
            <begin position="44"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="region of interest" description="NADPHX" evidence="1">
        <location>
            <begin position="113"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="NADPHX" evidence="1">
        <location>
            <begin position="184"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="213"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="216"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="271" mass="29423" checksum="4ED2B733C1156792" modified="2014-10-29" version="1">MTHRVGVLDHELCQPKKCGLECIKYCPVNKSGADCIVLNEESKKAQIDEDICNGCGICVKVCPFDAITIVNLASELATDKIHQYGPNSFRLYKLPTPKKGEVVGLLGRNGMGNNGGDGLVMARHLAGYGAKVTVMLLGNPENIKTEESKWNWSILEKMPSVKLITGGSIDFDFKPDVIVDGILGTGISGEIREPYASAINYINQTDCYKFAVDVPSGLDPQTGETANICTKCDMTVTFHKMKQGIPKRKDLTGELFAEKIGIPPEAEEGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM5</accession>
    <name>A0A087RZM5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transketolase protein</fullName>
            <ecNumber evidence="2">2.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tkt</name>
        <name evidence="2" type="ORF">AAA799P11_00870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18929">
        <property type="protein sequence ID" value="KFM18929"/>
        <property type="gene ID" value="AAA799P11_00870"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.837"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016857">
        <property type="term" value="F:racemase and epimerase activity, acting on carbohydrates and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004802">
        <property type="term" value="F:transketolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006082">
        <property type="term" value="P:organic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044272">
        <property type="term" value="P:sulfur compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00429">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02012">
        <property type="entry name" value="TPP_TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000056">
        <property type="entry name" value="Ribul_P_3_epim-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00834">
        <property type="entry name" value="Ribul_P_3_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01085">
        <property type="entry name" value="RIBUL_P_3_EPIMER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="1">
        <location>
            <begin position="12"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="555" mass="61618" checksum="86A3B4FCCE92C448" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZP4</accession>
    <name>A0A087RZP4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">30S ribosomal protein S2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rps2</name>
        <name evidence="5" type="ORF">AAA799P11_00894</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18948">
        <property type="protein sequence ID" value="KFM18948"/>
        <property type="gene ID" value="AAA799P11_00894"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.856"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01425">
        <property type="entry name" value="RPS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001865">
        <property type="entry name" value="Ribosomal_S2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018130">
        <property type="entry name" value="Ribosomal_S2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005707">
        <property type="entry name" value="Ribosomal_S2_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023591">
        <property type="entry name" value="Ribosomal_S2_flav_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11489">
        <property type="entry name" value="PTHR11489"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00318">
        <property type="entry name" value="Ribosomal_S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00395">
        <property type="entry name" value="RIBOSOMALS2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52313">
        <property type="entry name" value="SSF52313"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00963">
        <property type="entry name" value="RIBOSOMAL_S2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="15721" checksum="7D77C7C1C3784826" modified="2014-10-29" version="1" fragment="single">ENLIVCSGRQYAETPIEKFCETLGSKKLLGRFMPGTLTNPSLPYYIEPKLVLISDPQVDEQAITEATNAGIPVIGIANTDNITSNLDVIIPANNRGRKALATVYWLLVRQILIEKGELKEEDPMSVEIDDFETKITEEEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZQ8</accession>
    <name>A0A087RZQ8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF6036 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00809</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18962">
        <property type="protein sequence ID" value="KFM18962"/>
        <property type="gene ID" value="AAA799P11_00809"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045792">
        <property type="entry name" value="DUF6036"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19502">
        <property type="entry name" value="DUF6036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6036" evidence="1">
        <location>
            <begin position="70"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="142" mass="16634" checksum="9F7334F860A8B173" modified="2014-10-29" version="1">MLHTDEQRQSQDLDFVVAEQITNDEFLDKGYKIDLQRGRKFTPRGYKIDVYHERSLNDILLEYIIKTADTIPVDNKGTTVNTISLEGLIVAKFRAGRDQDIEDLQRLSIRCESKIDWNEIKNLTKNDVEYHNIEQAIRLYTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR0</accession>
    <name>A0A087RZR0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lamin Tail Domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00816</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18964">
        <property type="protein sequence ID" value="KFM18964"/>
        <property type="gene ID" value="AAA799P11_00816"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.779"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001322">
        <property type="entry name" value="Lamin_tail_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036415">
        <property type="entry name" value="Lamin_tail_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00932">
        <property type="entry name" value="LTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74853">
        <property type="entry name" value="SSF74853"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51841">
        <property type="entry name" value="LTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LTD" evidence="1">
        <location>
            <begin position="52"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="1128" mass="123626" checksum="3D23FED272EA7F38" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS9</accession>
    <name>A0A087RZS9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">2-phospho-L-lactate guanylyltransferase</fullName>
            <shortName evidence="1">LP guanylyltransferase</shortName>
            <ecNumber evidence="1">2.7.7.68</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">cofC</name>
        <name evidence="2" type="ORF">AAA799P11_00835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Guanylyltransferase that catalyzes the activation of (2S)-2-phospholactate (2-PL) as (2S)-lactyl-2-diphospho-5'-guanosine, via the condensation of 2-PL with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2S)-2-phospholactate + GTP + H(+) = (2S)-lactyl-2-diphospho-5'-guanosine + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:63424"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:59435"/>
            <dbReference type="ChEBI" id="CHEBI:59906"/>
            <dbReference type="EC" id="2.7.7.68"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; coenzyme F420 biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the CofC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.68" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18983">
        <property type="protein sequence ID" value="KFM18983"/>
        <property type="gene ID" value="AAA799P11_00835"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.802"/>
    <dbReference type="UniPathway" id="UPA00071"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043814">
        <property type="term" value="F:phospholactate guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02114">
        <property type="entry name" value="CofC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002835">
        <property type="entry name" value="CofC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40392">
        <property type="entry name" value="PTHR40392"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01983">
        <property type="entry name" value="CofC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03552">
        <property type="entry name" value="F420_cofC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="212" mass="24464" checksum="BEE734352B7477F1" modified="2014-10-29" version="1">MKIAAIIPVKTFSNAKTRLDLPPQKIEDLCKVMLEEILQTVSISPQIDKVVMVTKEKKAIEIGEKFNVHTIIDEKEESVNGAVALADKYLLENNFDASMVFPQDIPYIKTQDIDFMLKYKMHPNFAIIVPSRRFDGTNALVRMPVDLMETHYDEDSYKIHMNTAKEHTLNVAMVFVKRIMWDVDNAEDLKFLLEQKEKPHIAKKIKQVLETT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0K3</accession>
    <name>A0A087S0K3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative ATP-dependent helicase lhr protein</fullName>
            <ecNumber evidence="3">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lhr</name>
        <name evidence="3" type="ORF">AAA799P11_00775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19257">
        <property type="protein sequence ID" value="KFM19257"/>
        <property type="gene ID" value="AAA799P11_00775"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="34"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="239"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="530"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="530" mass="59888" checksum="1E9720D1340E3C74" modified="2014-10-29" version="1" fragment="single"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L2</accession>
    <name>A0A087S0L2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cobalt-precorrin-8X methylmutase protein</fullName>
            <ecNumber evidence="5">5.4.99.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cbiC</name>
        <name evidence="5" type="ORF">AAA799P11_00784</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.61" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19266">
        <property type="protein sequence ID" value="KFM19266"/>
        <property type="gene ID" value="AAA799P11_00784"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.755"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016993">
        <property type="term" value="F:precorrin-8X methylmutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003722">
        <property type="entry name" value="Cbl_synth_CobH/CbiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036588">
        <property type="entry name" value="CobH/CbiC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02570">
        <property type="entry name" value="CbiC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63965">
        <property type="entry name" value="SSF63965"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiC" evidence="4">
        <location>
            <begin position="9"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="213" mass="23028" checksum="798963D7A1C0FBFF" modified="2014-10-29" version="1">MQTKKGQSIEDASMQMIEDEIGSHSYNEKEWPIVRRIIHSTADFDFADKNKIIFHKDAIESGMKALKNGCSIVVDVNGVIGGLNKQNPKDFGNEIVCNISKPEIMELAKKEGKTRSQVSMRAAKLDIDGGIVAIGNAPTALQEVIKMVKEGIIKPALIIGIPVGFICAAESKEELSKLDEAPFITNLGRKGGSSSASAIINAIFKLIRAESDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S138</accession>
    <name>A0A087S138_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00766</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19442">
        <property type="protein sequence ID" value="KFM19442"/>
        <property type="gene ID" value="AAA799P11_00766"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="40" mass="4658" checksum="500C64A0B7D0E4B7" modified="2014-10-29" version="1">MGTQELTSEQKEEIQQRIIEACKKDTGHVQKNMLRDLEQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S192</accession>
    <name>A0A087S192_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Erythromycin 3''-O-methyltransferase protein</fullName>
            <ecNumber evidence="2">2.1.1.254</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00687</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.254" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19496">
        <property type="protein sequence ID" value="KFM19496"/>
        <property type="gene ID" value="AAA799P11_00687"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.666"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102307">
        <property type="term" value="F:erythromycin C 3''-o-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102308">
        <property type="term" value="F:erythromycin D 3''-o-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="77"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="280" mass="31765" checksum="36276669B17CE5CE" modified="2014-10-29" version="1">MISINPLDVFLWTFRRNEKDTVNLYNTLSPVMQLATGGSMLNFGYWSSDHSEPIPAQENLCVVFANLAELSSAKHVVDVGSGLSAPSHLWQQKFPDISLYDVNINYSQLSFGKKQKIEFLNSSSTKLPFTNNSVDRVLALESAQHFKPLSDFISESKRVLTNSGLLVMAIPVTLGNSSLKDLGMLKFTWSSEHYSLDDVKNTVQSHGFEIKHEQLIGNFVYDPLADYYVENREHLKKSILEKYPNYVENILYKSIIKMKTASQNGIIDYVLLKCIPETRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E4</accession>
    <name>A0A087S1E4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Proteinase inhibitor I1 Kazal</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00537</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19548">
        <property type="protein sequence ID" value="KFM19548"/>
        <property type="gene ID" value="AAA799P11_00537"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="58" mass="6923" checksum="BDB988AACB913FEA" modified="2014-10-29" version="1">MRAFYTFEELGQQLSDDQEGRVMLNQIRKMVSFDIPKVELDAMKQEIREELKELGFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H3</accession>
    <name>A0A087S1H3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative 2-isopropylmalate synthase protein</fullName>
            <ecNumber evidence="2">2.3.3.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">leuA</name>
        <name evidence="2" type="ORF">AAA799P11_00566</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19577">
        <property type="protein sequence ID" value="KFM19577"/>
        <property type="gene ID" value="AAA799P11_00566"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.550"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044249">
        <property type="term" value="P:cellular biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002034">
        <property type="entry name" value="AIPM/Hcit_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00816">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="1">
        <location>
            <begin position="27"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="393" mass="43392" checksum="92AFA136ADEC12E7" modified="2014-10-29" version="1">MSTISVMKDPNHYANMYNAYEKNPKKIRVLDSTLREGEQHPGVSFTNKQRIQIAWMLDYFGVDQIEISPVVSNDHKEATKTIIKQGLKADIVSHGRALKEDIDVSLGCDAKWCAAYLGISDIHLKDKLRISREEALGRAVETVEYAKSHGLKIRFTVEDGSRAEPEFLLKVCKAIEEAGVDRISLPDTVGILRPIGMYNFVKKVRDSIDVPLDAHVHNDIGFAVANAFSACDAGVDQIHTTIDGIGERTGIPPLAEVAVALTYLYKSPNDFRLDMLLDLSRLIEEYTTIKPYDSKPIVGSSAYKHKAGTHLAAILRNPAAYEPIPPRAVGNRRRIVFGELAGKTGAAYLMSLLGLEKDDESAKAVAAGLKGLRMGDLIEIPLEDRLEKIINDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H9</accession>
    <name>A0A087S1H9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">FAD synthase protein</fullName>
            <ecNumber evidence="4">2.7.7.39</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ribL</name>
        <name evidence="4" type="ORF">AAA799P11_00572</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.39" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19583">
        <property type="protein sequence ID" value="KFM19583"/>
        <property type="gene ID" value="AAA799P11_00572"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.556"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047348">
        <property type="term" value="F:glycerol-3-phosphate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00125">
        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP_transf_like" evidence="3">
        <location>
            <begin position="70"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="186"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="23057" checksum="78CEB1F99518FFA1" modified="2014-10-29" version="1">MLESSKRVILSSFYVSQIEGTNPIERIKERTAWSDDKINSEIDDLIKNHFVNEDKKSLTESGRNSLKVVLAGGVFDIIHPGHIHTLNAAKELGDVLVVVVATDNTAIKMKKRQPLHSQEQRQELVNSLSMVDLCLIGQEDDIFKTVNNVRPQIIALGYDQVHQEKFITEGCKKINLDAKVARLQSPIPDSSSSKIQKEYGESIHGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J5</accession>
    <name>A0A087S1J5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ubiquinone-menaquinone biosynthesis methyltransferase ubiE protein</fullName>
            <ecNumber evidence="4">2.1.1.163</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00588</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.163" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19599">
        <property type="protein sequence ID" value="KFM19599"/>
        <property type="gene ID" value="AAA799P11_00588"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.572"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004033">
        <property type="entry name" value="UbiE/COQ5_MeTrFase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01209">
        <property type="entry name" value="Ubie_methyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0830">Ubiquinone</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="230" mass="25645" checksum="791F695292231A1B" modified="2014-10-29" version="1">MGLGSSYWGEVIEVLREIIPVYDKVNSIISLGKDVEHRNRGISNRVLPGNKILDAGSGFGNMSKTALKLTDGKISVTLYDPLVPMLKNTGSHFEKTPDMANGVFEHIPFRDEEFDAVLCGYSLRDAINLRIAISEIHRVLKKEGRFVIVDLGKPDNGFIRTGVAFYLRYILPILAFTAGGKLGLKFGTLYGTFKRWPQNKKLEGLLLEKFSRVEFEKDLMGGAIMVAAYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J6</accession>
    <name>A0A087S1J6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Quinolone resistance protein NorA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">norA</name>
        <name evidence="3" type="ORF">AAA799P11_00589</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19600">
        <property type="protein sequence ID" value="KFM19600"/>
        <property type="gene ID" value="AAA799P11_00589"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.573"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="238"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="267"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="290"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="325"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="354"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="2">
        <location>
            <begin position="4"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="384" mass="41841" checksum="3C2BB421A5CE0CF2" modified="2014-10-29" version="1">MNKVLILVNITGLIIGISYGLHGPILPVFAKNVIGATYSELGLIGLANFIPYMFIPLFVGILLDRFNNGYLLALGTVINSTSIYLLSIAQSVPEIMGFRILTGVAHAFFWPPCESIISNESTEKNRVRNISWFTMFFVIGFMVGPLLGTVFLEGLDTTYRILFQITAFILATALISSILVSRKSVRSHHGHFSFSSIKEMKRFPEAIVLLLFCTSSFGIILTIYPAFLNDNGMTDTDILLLFFVFGISRVVSLALAGKLARKTSQTLIAAVSTISIGLAISAAADSIIMFAVALVLMGFGFSIFFPLTLEIILSKTKKTISGKIIGAYETVFGMGWLIGPTLGGPITQSFGDDTPYLIFCVIGVGVALLAIRSRKKLEPQRVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M3</accession>
    <name>A0A087S1M3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00616</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19627">
        <property type="protein sequence ID" value="KFM19627"/>
        <property type="gene ID" value="AAA799P11_00616"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="14128" checksum="54185B7403567C03" modified="2014-10-29" version="1">MAKKKDELADEAKKIKAELDALKKKKEVLDSKPKKSKAKTTKKEAKPAKKTTKKEAKPAKKTTKKEAKPAKXXXXXXXXKENHKERSKTCKENHKERSKTCKENHKERSKTCQREKINQKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M4</accession>
    <name>A0A087S1M4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00617</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19628">
        <property type="protein sequence ID" value="KFM19628"/>
        <property type="gene ID" value="AAA799P11_00617"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.603"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="16709" checksum="1073130B39763DC3" modified="2014-10-29" version="1">MASKRIFVVFILPVIFSIAFGSAIMGNILQDPDRELNMIPSMSFSEGSHDADIEIIGLSKIYSTSESVEISVQISDSHFDCGDLYVTIYSGKDVITQGGFFEQCFAERNELIPIGEKFSKIVDVSGSYKIVAEMISEDLKNISISEEFTVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M7</accession>
    <name>A0A087S1M7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Adenine phosphoribosyltransferase</fullName>
            <shortName evidence="10">APRT</shortName>
            <ecNumber evidence="5 10">2.4.2.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">apt</name>
        <name evidence="12" type="ORF">AAA799P11_00620</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>AMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + adenine</text>
            <dbReference type="Rhea" id="RHEA:16609"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.4.2.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Purine metabolism; AMP biosynthesis via salvage pathway; AMP from adenine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.7" evidence="5 10"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19631">
        <property type="protein sequence ID" value="KFM19631"/>
        <property type="gene ID" value="AAA799P11_00620"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.606"/>
    <dbReference type="UniPathway" id="UPA00588">
        <property type="reaction ID" value="UER00646"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003999">
        <property type="term" value="F:adenine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006168">
        <property type="term" value="P:adenine salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044209">
        <property type="term" value="P:AMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00004">
        <property type="entry name" value="Aden_phosphoribosyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005764">
        <property type="entry name" value="Ade_phspho_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01090">
        <property type="entry name" value="apt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9 10" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="11">
        <location>
            <begin position="35"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM19631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="170" mass="18890" checksum="A4CD502121BB1640" modified="2014-10-29" version="1">MNLKDKIAEYPNFPKKGILFRDFSPILKDPSAMESIADEFSKHFHPKNIDIFAGIESRGFILACILATRYNKGMMMIRKAGKLPGKTTKISYTIEYGKDTIEIQKDIIEEGQKVLICDDLLATGGTAKASAKLIEKVGGKIVGFAFIIELTDLNGMKGISKYDCKSLVKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P0</accession>
    <name>A0A087S1P0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF5679 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00633</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19644">
        <property type="protein sequence ID" value="KFM19644"/>
        <property type="gene ID" value="AAA799P11_00633"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.619"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044044">
        <property type="entry name" value="DUF5679"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18930">
        <property type="entry name" value="DUF5679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5679" evidence="1">
        <location>
            <begin position="5"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="48" mass="5416" checksum="58FD80E084D27E8B" modified="2014-10-29" version="1">MVTAYCVKCREKRDIKDPKETKLKNGRPAVKGTCPECGTNVFRIGKMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P5</accession>
    <name>A0A087S1P5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dihydroneopterin triphosphate pyrophosphatase protein</fullName>
            <ecNumber evidence="3">2.7.7.72</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00638</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.72" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19649">
        <property type="protein sequence ID" value="KFM19649"/>
        <property type="gene ID" value="AAA799P11_00638"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.624"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052929">
        <property type="term" value="F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052928">
        <property type="term" value="F:CTP:3'-cytidine-tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052927">
        <property type="term" value="F:CTP:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016437">
        <property type="term" value="F:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="2">
        <location>
            <begin position="2"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="139" mass="16392" checksum="AFBABD303968D1B1" modified="2014-10-29" version="1">MIEETSAGIVLFRKEDSKNLFLLLHYPSGHWDFVKGKMEKGESTHETAIRETREETGITDVKFLDDFEEWIEYNFQYQKELVHKKVVFFLAETTTKEVNISHEHLDYTWMDYNTAMEKTTFDNAKTVLTKAQMLLAKTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q3</accession>
    <name>A0A087S1Q3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Winged helix-turn-helix protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00646</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19657">
        <property type="protein sequence ID" value="KFM19657"/>
        <property type="gene ID" value="AAA799P11_00646"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.632"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038723">
        <property type="entry name" value="ArnR1-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14947">
        <property type="entry name" value="HTH_45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_45" evidence="1">
        <location>
            <begin position="4"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="95" mass="10837" checksum="393BBFA3BEE2CFB6" modified="2014-10-29" version="1">MAEYRTHMKIIGDILSTTRDDLQDEDGATVTYLIRKANISHSRISRILKTLVSQGLLEQVDSQGSNKYKISQTGREFLQAYYKFTNFADNFGLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S5</accession>
    <name>A0A087S1S5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00673</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19679">
        <property type="protein sequence ID" value="KFM19679"/>
        <property type="gene ID" value="AAA799P11_00673"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="94" mass="11231" checksum="F41D09D894590D03" modified="2014-10-29" version="1">MSAIPWFDDFEGVAYRYYDLRMNVVPLVSDRKESASLWHDTIRYWVDPSIKLRFVEIGDKYWXXXXXRICLFTKSYKSPSTMSDSRKAMVEKHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X5</accession>
    <name>A0A087S1X5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Oligopeptide transport system permease protein AppB</fullName>
            <ecNumber evidence="6">2.7.1.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">appB</name>
        <name evidence="6" type="ORF">AAA799P11_00469</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19729">
        <property type="protein sequence ID" value="KFM19729"/>
        <property type="gene ID" value="AAA799P11_00469"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.452"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004743">
        <property type="term" value="F:pyruvate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="129"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="273"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="315"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="125"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="349" mass="38760" checksum="30E2CE52E8BA6BE9" modified="2014-10-29" version="1">MKRYVATRAATMFGVLMITLLITISLVGSNMDTILKQGIVFQVRSEITENPAIAESFSSVEEFEGFIQSQIDQRIKVLGLDEPWYSPQRIGLTMYKILLLDFGHATFLTSDAGSSDVKDIIFEKLPRTILLFTTATIIISIIGIFLGALSASKVGSIIDRTTSSFAIISSSFPVWWIGMLMIFLFAFTYQIFPARATPDIPSSDPRYIGSLLYHMTLPLITIVMIGFGSWAYLVRNFMVGIMQEDFIMAKRTIGIKQKKIIYTHALKNAAPPIVTILALSLSGSLGGAIITEAVFDWPGMGRLYFEAITVMDLPVIIGATYILTVFFLVSIFIADLLYGYFDPRVRTGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y1</accession>
    <name>A0A087S1Y1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polyketide cyclase / dehydrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19735">
        <property type="protein sequence ID" value="KFM19735"/>
        <property type="gene ID" value="AAA799P11_00475"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.458"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019587">
        <property type="entry name" value="Polyketide_cyclase/dehydratase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10604">
        <property type="entry name" value="Polyketide_cyc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="153" mass="17542" checksum="0DA3483E73CE46AA" modified="2014-10-29" version="1">MAKTSRKSFHTGTVKKTIKIKASKDKVWRKVSNIVGLPTWLVDVKKTVYLSKKKKGVGAIRLITFADENQIEEHVVAWETGKYFTYVATEGLPLRAYVATISIKPKSRNLVELTWQSYINSKKMSEKQFTDFLVFMGSFYEASLENLKVLLEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y2</accession>
    <name>A0A087S1Y2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00476</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19736">
        <property type="protein sequence ID" value="KFM19736"/>
        <property type="gene ID" value="AAA799P11_00476"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.459"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="61"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="86"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="12047" checksum="F476079AE0BB84DA" modified="2014-10-29" version="1">MRFILIGIGLTFVGFLVLGVMGGQYQAATFEENEFGTCYEYFEDKPPQEINCSFKVMDQTVFFALVIGLLGAGVIALIKGARGDWDSKIKPEDVVGPGNSRNEDSEGKQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y8</accession>
    <name>A0A087S1Y8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00487</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19742">
        <property type="protein sequence ID" value="KFM19742"/>
        <property type="gene ID" value="AAA799P11_00487"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.465"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="87" mass="10285" checksum="C98BFF68915B7752" modified="2014-10-29" version="1">MSKLILPDHLEDKIFEIKYSDDAVSKITSYFPLNDSEKQEINSILNLDFSGFYSIFTDSISQEEWDRTKEQIKKRFNDELFGIDKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S222</accession>
    <name>A0A087S222_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Thiamine thiazole synthase</fullName>
            <ecNumber evidence="4">2.4.2.59</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">thi4</name>
        <name evidence="5" type="ORF">AAA799P11_00521</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>glycine + hydrogen sulfide + NAD(+) = ADP-5-ethyl-4-methylthiazole-2-carboxylate + H(+) + 3 H2O + nicotinamide</text>
            <dbReference type="Rhea" id="RHEA:55704"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17154"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:139151"/>
            <dbReference type="EC" id="2.4.2.59"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homooctamer; tetramer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the THI4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.59" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19776">
        <property type="protein sequence ID" value="KFM19776"/>
        <property type="gene ID" value="AAA799P11_00521"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.503"/>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016763">
        <property type="term" value="F:pentosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052837">
        <property type="term" value="P:thiazole biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00304">
        <property type="entry name" value="Thi4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002922">
        <property type="entry name" value="Thi4_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022828">
        <property type="entry name" value="Thi4_prok"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00292">
        <property type="entry name" value="TIGR00292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="4">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="69"/>
            <end position="70"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>glycine</name>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="272" mass="29507" checksum="2557FA6AC3C5D688" modified="2014-10-29" version="1">MQEATVAEQSSKIFTDIREVEITQAIANEFHEVLIDRAESDVIIIGAGPAGLTASRELSNLGFKVLVIEQNNYLGGGYWLGGYMMNPVTVREPAQKIWDELGVPYKKVKDGLYLTPGPHAVSKLIAGACDAGVKFLQLTKFDDLVLKNGRVAGIVVNWMPVSALPRNITCVDPVAFEAKVIIDASGHDSVAVKRLVDRGLAEWKGMEPMFVNDGEEHVVHKTGEVYPGLIAAGMSVTETHGLARMGPTFGSMLYSGKRAAEIAAEKIKELER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S290</accession>
    <name>A0A087S290_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative uroporphyrinogen-III synthase protein</fullName>
            <ecNumber evidence="2">4.2.1.75</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hemD</name>
        <name evidence="2" type="ORF">AAA799P11_00373</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.75" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19844">
        <property type="protein sequence ID" value="KFM19844"/>
        <property type="gene ID" value="AAA799P11_00373"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.362"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004852">
        <property type="term" value="F:uroporphyrinogen-III synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006780">
        <property type="term" value="P:uroporphyrinogen III biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06578">
        <property type="entry name" value="HemD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10090">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036108">
        <property type="entry name" value="4pyrrol_syn_uPrphyn_synt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003754">
        <property type="entry name" value="4pyrrol_synth_uPrphyn_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039793">
        <property type="entry name" value="UROS/Hem4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40082">
        <property type="entry name" value="PTHR40082"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02602">
        <property type="entry name" value="HEM4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69618">
        <property type="entry name" value="SSF69618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HEM4" evidence="1">
        <location>
            <begin position="19"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="268" mass="29283" checksum="BB17B88ED00C9F77" modified="2014-10-29" version="1">MMLDGKTIAITRSRDDAAEFISLAEQNNATPIALPTIELVSKGEKIVDEFLDSVKTYNPDYSVFMSSKAVKLLFDTAKESGKLETLQLAIANTIVISVGPKTTIALEAQGIKVNHQPEKTFSSVGVGELFTQLNAVGKKVIVPRSGASTPFLKELLNKIGIDVFEIHLYDVCAFRDTSQWNGFRELFSQNKVDGVVFTSASSVRGFFEIMTKDYDENSLLDSLAKLSVVSIGPFTSDELKKFKVKNTVAEVHTVAGAFEAMKNILTVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B0</accession>
    <name>A0A087S2B0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Siroheme decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.111</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nirD</name>
        <name evidence="7" type="ORF">AAA799P11_00398</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2 H(+) + siroheme = 12,18-didecarboxysiroheme + 2 CO2</text>
            <dbReference type="Rhea" id="RHEA:19093"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:60052"/>
            <dbReference type="ChEBI" id="CHEBI:140497"/>
            <dbReference type="EC" id="4.1.1.111"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Porphyrin-containing compound metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the Ahb/Nir family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.111" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19864">
        <property type="protein sequence ID" value="KFM19864"/>
        <property type="gene ID" value="AAA799P11_00398"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.383"/>
    <dbReference type="UniPathway" id="UPA00326"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040523">
        <property type="entry name" value="AsnC_trans_reg2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17805">
        <property type="entry name" value="AsnC_trans_reg2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg2" evidence="6">
        <location>
            <begin position="64"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="AsnC_trans_reg2" evidence="6">
        <location>
            <begin position="235"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF17805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="341" mass="39682" checksum="EB9492B92BA7A9C3" modified="2014-10-29" version="1">MTSMDELDKELLNEIQWTFPLVTRPFDAIAKKFDTTPEIVKNRLKKLKEIGVLRQLSAIFDTRKLGYTSSLVAMEIEPDKLEYVASQINRHPGVSHNYERDHQFNLWFTLAVPPGSDLKTELDKFNVLKGIKKVRMLPTLQLFKIGVKLDMVDEKKHDVAPTEEKKEIKNVKFEPTEADKDFIRELQKDMDIIDEPFIKAAHNLGITENELFAKMKHYEEIGVMRRFAAILRHRQVGFTANGMIVWKVPEDRIADVGAQLGAFPQVSHCYERPTYPDWPYNVFSMIHCKTHDEANEMAKTIQDQIHVDDYRILFSSREFKKTRVEYFVENSFSLEETVPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C1</accession>
    <name>A0A087S2C1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chromosome segregation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00409</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19875">
        <property type="protein sequence ID" value="KFM19875"/>
        <property type="gene ID" value="AAA799P11_00409"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.394"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003768">
        <property type="entry name" value="ScpA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023093">
        <property type="entry name" value="ScpA-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33969">
        <property type="entry name" value="PTHR33969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="225" mass="25651" checksum="005F19C4A6F1C8C1" modified="2014-10-29" version="1">MSESPTPNSISQEPVNILFSPQSVVKKDVWEIDLIQILNLLIKILEKSGKKDLKVAGMAALSSSLIYRMKVESIFALQKAAMQKKPMHQRTDVDIDLIEMPYRHESTYPVSLDDLLGLLQNLIGTIANPQSRRNRQVEIEPIEAPDFQEYFISLESIIGKYEDLVMKKIANEGHGLLQNIIEELDPVDSIRCFFAILFLARDQKVDLEQVEEDIKITVIKEELTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D3</accession>
    <name>A0A087S2D3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA pseudouridine(55) synthase</fullName>
            <ecNumber evidence="1">5.4.99.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pus10</name>
        <name evidence="5" type="ORF">AAA799P11_00426</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.25" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19887">
        <property type="protein sequence ID" value="KFM19887"/>
        <property type="gene ID" value="AAA799P11_00426"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.406"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039894">
        <property type="entry name" value="Pus10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004114">
        <property type="entry name" value="THUMP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21568">
        <property type="entry name" value="PTHR21568"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02926">
        <property type="entry name" value="THUMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="THUMP" evidence="4">
        <location>
            <begin position="46"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="381" mass="43058" checksum="E5DAA27F3D6E1C8E" modified="2014-10-29" version="1">MTTYQKITPIANQILKKYDLCDHCLGRLFSKQLYLSSNKLLGKKLKKNLKSARRCYICKNLFDNLDYFLNMMLDAVYPYSYSSFSVGATIKPSIIDRDDAIRSKYKLKGIDGIKTDITKELGKLFSRKTKKTFDYLDPEIVFTVNLKEESCDIRSKSVALSGRYVKPVRGFSQKQKSCSNCSGKGCRICDFHGIIEYDSVEGEISQFLFKKLGGTTAKFTWIGGEDKSSLILGTGRPFFVKIQNPHKRSLRVKSANLEHVTVNNLKIVPDSPKKPLKFNSLVEAKISTSSKIDSNLLRKLKTLTKKPIVVYEKSGKRSEKKILSVKYKKQGDTSFTLFFKFEGGLPVKRFVTGDDVSPGVSQILGVLCKCIGFDFHDVEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E5</accession>
    <name>A0A087S2E5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00438</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19899">
        <property type="protein sequence ID" value="KFM19899"/>
        <property type="gene ID" value="AAA799P11_00438"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="63" mass="7207" checksum="75B28A34EE4CFAAC" modified="2014-10-29" version="1">MTEVPMINDSPPEELRCTACLLPMQYQTKKDGKFLWQCFKCGKQFLVPGNNDGSVEESWSPPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E8</accession>
    <name>A0A087S2E8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydroneopterin triphosphate pyrophosphatase protein</fullName>
            <ecNumber evidence="2">3.6.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nudB</name>
        <name evidence="2" type="ORF">AAA799P11_00441</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.17" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19902">
        <property type="protein sequence ID" value="KFM19902"/>
        <property type="gene ID" value="AAA799P11_00441"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.422"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004081">
        <property type="term" value="F:bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="134" mass="15787" checksum="CB2525B1DB3961D5" modified="2014-10-29" version="1">MRSTKIVTSFIKDNDKLLILKRSDKVKTMKGLWAGISGIIEKNEEPLKRAKIEIFEEVGITEDKITLVKSVEEMRVNSPQYQNHEWQIFPFLFEAKNPTIKLNWENSDFKWIKVDELKDYETVPSLEKVLFNLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2F4</accession>
    <name>A0A087S2F4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">Shikimate dehydrogenase (NADP(+))</fullName>
            <shortName evidence="5">SDH</shortName>
            <ecNumber evidence="2 5">1.1.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">aroE</name>
        <name evidence="9" type="ORF">AAA799P11_00447</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17737"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.25"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the shikimate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.25" evidence="2 5"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19908">
        <property type="protein sequence ID" value="KFM19908"/>
        <property type="gene ID" value="AAA799P11_00447"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.428"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004764">
        <property type="term" value="F:shikimate 3-dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019632">
        <property type="term" value="P:shikimate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00222">
        <property type="entry name" value="Shikimate_DH_AroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041121">
        <property type="entry name" value="SDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011342">
        <property type="entry name" value="Shikimate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013708">
        <property type="entry name" value="Shikimate_DH-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022893">
        <property type="entry name" value="Shikimate_DH_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089">
        <property type="entry name" value="PTHR21089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18317">
        <property type="entry name" value="SDH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08501">
        <property type="entry name" value="Shikimate_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00507">
        <property type="entry name" value="aroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4 5" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shikimate_dh_N" evidence="7">
        <location>
            <begin position="7"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="Shikimate_DH" evidence="6">
        <location>
            <begin position="113"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="SDH_C" evidence="8">
        <location>
            <begin position="240"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate binding" evidence="5">
        <location>
            <begin position="15"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="126"/>
            <end position="130"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="150"/>
            <end position="155"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="273" mass="30011" checksum="5529E179C97E4572" modified="2014-10-29" version="1">MGKTFAVIGDPINHSLSPNIHSAAFRELNLDCSYIAYRIPKEELAEGIEGLKKIKIDGFNVTIPHKVEMMKYLDKIDESCSLIGAVNTVTNNDGILKGYNTDMDGFLEPLKKRNVDIKNSNVLLLGAGGAARAIVAGFAKEKAKEITIANRTIEKANNLVEFAQKISLDANAITIDQVEESAKNYDIIVNATSVGLQNEPSPISLEGVNEKTVVYDIVYMPMHTDFLKKAKEKNAIVIFGYEMLLGQAVRAFEIWHGMEAPYNAMKKALLGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L6</accession>
    <name>A0A087S2L6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00274</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19970">
        <property type="protein sequence ID" value="KFM19970"/>
        <property type="gene ID" value="AAA799P11_00274"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="34" mass="3592" checksum="B2A7194B80CA10BE" modified="2014-10-29" version="1">MNKRFVIVGIVLGIVVIAAVLIGSPMFGGFDAMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N1</accession>
    <name>A0A087S2N1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphonate ABC transporter periplasmic phosphonate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00289</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19985">
        <property type="protein sequence ID" value="KFM19985"/>
        <property type="gene ID" value="AAA799P11_00289"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.282"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="NodB homology" evidence="2">
        <location>
            <begin position="318"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="863" mass="97658" checksum="02D36799ECFE018F" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N6</accession>
    <name>A0A087S2N6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">CBS domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">AAA799P11_00294</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19990">
        <property type="protein sequence ID" value="KFM19990"/>
        <property type="gene ID" value="AAA799P11_00294"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.287"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04590">
        <property type="entry name" value="CBS_pair_CorC_HlyC_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002550">
        <property type="entry name" value="CNNM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044751">
        <property type="entry name" value="Ion_transp-like_CBS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005170">
        <property type="entry name" value="Transptr-assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03471">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01595">
        <property type="entry name" value="DUF21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01091">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51846">
        <property type="entry name" value="CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0129">CBS domain</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="122"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="CNNM transmembrane" evidence="10">
        <location>
            <begin position="1"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="9">
        <location>
            <begin position="205"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="9">
        <location>
            <begin position="270"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM19990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="417" mass="46472" checksum="B7C49E4A9E6CE0CD" modified="2014-10-29" version="1">MVDLWVEITALAVLIGLSGFFSGLEVALVGTRNSKVNQLLKQKIKGAEALYKLKQNPGWMMSSVNLGNNLVNVGSSALATSISLRLFGDDGLAIAIGIMTFLILVFGEITPKTYCNANATKIALRFAPVLLAFSYMFWPVVKVFEIITRGMVKVTGSSYHTPPITEEEIKGIVEQGLVDKALEKDESELVHSALEFDDTVIRTVMTPRTKMFMLPAKMLLFEALPLINQSTHSRIPIFGETQDDVVGFVHVRDVLQQLEKEKEMITLEQLARKPVFASQEKMVSSLLKEMKGRKTHMAMVIDEHGGVEGLVTLEDLVEEIIGDIEDETDAIKAAEYKSIDKDTIIVNGDIEIEKINKIFKTSIPEGDDYGTLNGLLHERLQDIPQSGDKIEVDSLRIIVEKVRKNMPKEVRIERIKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R7</accession>
    <name>A0A087S2R7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00326</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20021">
        <property type="protein sequence ID" value="KFM20021"/>
        <property type="gene ID" value="AAA799P11_00326"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="55" mass="6267" checksum="F6E0D3AB2E97DA5E" modified="2014-10-29" version="1">MKFKSICERNPGYVHLYCLKCGGAVHTEIGFALCVNCEQFYKVILKPLKSWSLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2V5</accession>
    <name>A0A087S2V5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00369</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20059">
        <property type="protein sequence ID" value="KFM20059"/>
        <property type="gene ID" value="AAA799P11_00369"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.358"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="11759" checksum="399068F9EFB155A8" modified="2014-10-29" version="1" fragment="single">PQLKKYDITQKVIEALADSESRAILFSIIRKGNTAAELSDKLKIPLSSVYKKLADLEELTLIEVEKWMLSDKGRKYKVYRSRISKADISIKKPEPVLTLLPNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X8</accession>
    <name>A0A087S2X8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase protein</fullName>
            <ecNumber evidence="3">2.4.1.83</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">arnC</name>
        <name evidence="3" type="ORF">AAA799P11_00153</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.83" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20082">
        <property type="protein sequence ID" value="KFM20082"/>
        <property type="gene ID" value="AAA799P11_00153"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.152"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004582">
        <property type="term" value="F:dolichyl-phosphate beta-D-mannosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="227"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="264"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="7"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="294" mass="32483" checksum="5A2E3B2099FE8CEA" modified="2014-10-29" version="1">MLYLLACIPAYNEEGVIGDLIKKTLPLVDSVVVCDDGSTDLTSKEAKDAGSFVITHSENKGKGAALKSLFDFAKHSNADIIITIDGDGQFLPEEIPKLIKDVEDKKSDIVIGYRFETEKDMPSYRKFGNKILDELSKKAAHLNLRDTQSGFRAYSKHAIANINFKNDGFAADSEILVDASEKNMKISEQHVTVLYDTGSRTSTQNPVRQGGSVLIHLLELVLMKRPLTFLGIPGFIMLIAGIIASSITMTIFNETRYFSIPTTLVSMILFIVGIMLLLVSGILFSFNRTTHNNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y6</accession>
    <name>A0A087S2Y6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">WxcM-like domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00161</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20090">
        <property type="protein sequence ID" value="KFM20090"/>
        <property type="gene ID" value="AAA799P11_00161"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008894">
        <property type="entry name" value="QdtA_cupin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05523">
        <property type="entry name" value="FdtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FdtA" evidence="1">
        <location>
            <begin position="14"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="150" mass="17520" checksum="04B78F57F8D9BDC6" modified="2014-10-29" version="1">MSENKIKWHTLEKHLTKDIHDGHVNGSLIPVWRDWDKTITVQPEMVYVTSINPGEIKGPHLHIIRHSYYVCIKGKVVFIIKEDSGKYLEIESSEEKPVLVEIPKNHSSAHINLSDEPSIILSVVNPSWKPDNRDEHNVTYDDYDWDKWKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z1</accession>
    <name>A0A087S2Z1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Capsule polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00166</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20095">
        <property type="protein sequence ID" value="KFM20095"/>
        <property type="gene ID" value="AAA799P11_00166"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015774">
        <property type="term" value="P:polysaccharide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007833">
        <property type="entry name" value="Capsule_polysaccharide_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05159">
        <property type="entry name" value="Capsule_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="503" mass="59361" checksum="6C8017ABF060FD33" modified="2014-10-29" version="1">MPKILFFLEIGSPHFGIAKYIKENLDCEVFAIINTNKAKNFFLEQNLIKFTNQWFLRDNITNTNTNLDLEYLRKFEEKYQIDLWNVVYSDVTFREYNPYYTFSRDEILSVVKQICEFYEKILDQSNPDYLIIRPTDAIADQLLQMICKAKGVRVLTLGFARLGQRTMISTDMDVLEAHMLENFENVQFTQQELFELMHGYTKQQDIFRKKFRNSKLNWLKTGIEFLGLISKKEYRRYYAHSGRTVPRVIGIEISNKFKKIIRERFLDKNSIRKLPDEKFVYFSLGLEPERTILIPTPFYSNQLEVIKNLARALPIEYQLFVKEHPMQKVRGWREIEYYKEILDLPNVQLIHPSVTNEEITKKSSLVVAVVGTSTLEAAIFGKPSIVFGKVIHSDLPSVFRVKNLEELPTIINKALETKVEMKDVNKLVNIIMKNSFDYEEGLLRVQINDRLFHGGELFDRNISVEEIKAVLDEHEEVFNLLGEKHIEKIKFYDYQKNKDFKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z4</accession>
    <name>A0A087S2Z4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase protein</fullName>
            <ecNumber evidence="2">2.6.1.87</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00169</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DegT/DnrJ/EryC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.87" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20098">
        <property type="protein sequence ID" value="KFM20098"/>
        <property type="gene ID" value="AAA799P11_00169"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099620">
        <property type="term" value="F:UDP-4-amino-4-deoxy-L-arabinose aminotransferase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00616">
        <property type="entry name" value="AHBA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000653">
        <property type="entry name" value="DegT/StrS_aminotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30244">
        <property type="entry name" value="PTHR30244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01041">
        <property type="entry name" value="DegT_DnrJ_EryC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000390">
        <property type="entry name" value="PLP_StrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="360" mass="40842" checksum="B84EFE92AC7F3244" modified="2014-10-29" version="1">MKKIKLFEPFTGKKEEEVIKKILNSHFWASGSGNGLVKKFEENFKNYVNSKECVAVSNGTAALHLALSMLDIRNKEVILPSMTFVATAHAIVLNGGKPVFADVNESSLCIDPKEIESKITKNTKAILPVHFGGFSADLKKISKIAKDFNISIVEDAAHAAGSKYNGQKIGSHGEFVCFSFHPVKNLAMPTGGIISINKKQSKEIVKKLHAKRWCGITERIETDYNIKEIGWNYYMNEFSAGIGLEQLKKLDTMNNIRKKIAKKYDKKLNIERKIPFNEECSFHIYWICIKNRKKFRKKLDENGIETGTHYKPVHHMDMYKIKSKLKITDNVSTELVSIPIHPNLTEENVEKIIQTINENV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z7</accession>
    <name>A0A087S2Z7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Spore coat polysaccharide biosynthesis protein SpsF</fullName>
            <ecNumber evidence="1">5.4.3.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">spsF</name>
        <name evidence="1" type="ORF">AAA799P11_00172</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.3.8" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20101">
        <property type="protein sequence ID" value="KFM20101"/>
        <property type="gene ID" value="AAA799P11_00172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042286">
        <property type="term" value="F:glutamate-1-semialdehyde 2,1-aminomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003329">
        <property type="entry name" value="Cytidylyl_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02348">
        <property type="entry name" value="CTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="234" mass="27212" checksum="B93BDFAAF8098B8F" modified="2014-10-29" version="1">MKTIGCIVQARMGSKRLPKKVLMKLNNKDSQLRFVIAQLQNCKLIEKIVVATTTLTEDDEIVEFLKKHNIECFRGSSSNVLKRYYQCAKNFSFDVIIRITADNPLIDPTIVDLAIKKFISNSFDYLTNTRKRTFPYGTEVEIFTFSALKKAYKNSTTPFELEHVTPYFYNNPEQFKIFDLVNSKDLSSFRWTVDEINDLNLVKILISKIQKRPILTNDILKILKDEPELIKINQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S304</accession>
    <name>A0A087S304_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Capsule polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00179</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20108">
        <property type="protein sequence ID" value="KFM20108"/>
        <property type="gene ID" value="AAA799P11_00179"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015774">
        <property type="term" value="P:polysaccharide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007833">
        <property type="entry name" value="Capsule_polysaccharide_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05159">
        <property type="entry name" value="Capsule_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="511" mass="61090" checksum="9B556BD1BBAD27B5" modified="2014-10-29" version="1">MKDKILFWLDNGLVYYGLAYFLNQKHDCEIYSIIETHEKPKKFYKNQKLIPFRKIWFFNDNVSIQNKEADIEYLSSIEKKYGINMWLIAYAERFFAQQSRYHKFAKNEILYLIEQECKLFEQVLDEVDPNFLIMRDVDMHHVNLLHQICKARGIKILSLFPAKMGSKWIVSDTDKLNLESKNSNNLQKNNRTLNELQNYLKEHSQQKWVQQYVSSSKINFLNKKTLSSILYLFFKQEKNEREKFMSVGRTRSKVFFVMLSLLLKRKYRQAFLDHNSRKEIKSDEKFVFFPLHVSPERYVDISAPFFSNQLEVIKNIARSLPVDYKLYVKEHFAMVTRYWREISFYKEILELPNVELIHPSVSSEEIIKKSSLVMTITGTAALQAAFFEKPSIVMSHVIYLEFLPFIRRIKNLEDLPYVIRSTLKSKVDLTELNRFVEILEKETFEYHSHIFLEEHNPIFKTLFSNVEISESEMKSFLDHNRETFELLVLEHLKKMNTDESQHVSTNERKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S305</accession>
    <name>A0A087S305_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase protein</fullName>
            <ecNumber evidence="2">2.6.1.87</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DegT/DnrJ/EryC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.87" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20109">
        <property type="protein sequence ID" value="KFM20109"/>
        <property type="gene ID" value="AAA799P11_00180"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099620">
        <property type="term" value="F:UDP-4-amino-4-deoxy-L-arabinose aminotransferase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00616">
        <property type="entry name" value="AHBA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000653">
        <property type="entry name" value="DegT/StrS_aminotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30244">
        <property type="entry name" value="PTHR30244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01041">
        <property type="entry name" value="DegT_DnrJ_EryC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000390">
        <property type="entry name" value="PLP_StrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="365" mass="41050" checksum="DCEB06BE1CA6E703" modified="2014-10-29" version="1">MQNQFKIPWSKPSIGKEELSSLQNVIQSGWLTQGKITQEFETQLSEYLSSNVITVNNGSSALTCALLAHGLKPGDKVLVPNFTFFATYSIPKMLGADVILVDVDESTLNMNPENVEKIVKTQDVKMVIVVDVAGLPVDIDAFVELSHRYNFVLIEDAAEALGSEYKHQKIGSFDHTAIFSFHAAKQITTVEGGCVSSNNEDIVKKLNQIRDLGRLSSGEYVHNIISSNFRTTDLQSAIGIEQLKKIDDFLKSRSKIATGYKKNLKNFSFQFIPDYVTKHSYMMFFAFAQNQQVRNKYLDSLRTGGVDVRMPWLPLSDQPVNSNLNVIKFPNSKNIYQNSLTLPIYNSMKNKDLQFVLDTFQNFSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S317</accession>
    <name>A0A087S317_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chondroitin synthase protein</fullName>
            <ecNumber evidence="2">2.4.1.214</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fcbD</name>
        <name evidence="2" type="ORF">AAA799P11_00192</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.214" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20121">
        <property type="protein sequence ID" value="KFM20121"/>
        <property type="gene ID" value="AAA799P11_00192"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.191"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018392">
        <property type="term" value="F:glycoprotein 3-alpha-L-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="299" mass="34933" checksum="562C80E9B40B6057" modified="2014-10-29" version="1">MPVYNGELFIKRAIESILSQTFTDFEFIISDNSSTDSTYQICQNFLKKDERIKLFKQNENIGIHRNFNFLLSQAKGEYFAWTAVDDYLDDDFMEKNLKILESDNSIVSSIGRIIPYGTDSLEIDTKLIETSNFPKFLKGFVKQGRRKKMTDTDPISGNMDHKIRTFLKITKSLGRFYGVHRTKQLKQCIVEKPFINVEVSVFLNLLKLGDFYEESSTTLYEFDEGISSRGIINMAKYSGHSTLGILFPFYPFTNWVIKNFGILTFFKNFDIFFRMNLGGEFALFVDIFLRIFNRFKKDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S332</accession>
    <name>A0A087S332_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8 10">1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase</fullName>
            <ecNumber evidence="5 8 10">5.3.1.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">hisA</name>
        <name evidence="11" type="ORF">AAA799P11_00207</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8 10">
            <text>1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide = 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:15469"/>
            <dbReference type="ChEBI" id="CHEBI:58435"/>
            <dbReference type="ChEBI" id="CHEBI:58525"/>
            <dbReference type="EC" id="5.3.1.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8 10">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 4/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 8 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 8 9">Belongs to the HisA/HisF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.16" evidence="5 8 10"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20136">
        <property type="protein sequence ID" value="KFM20136"/>
        <property type="gene ID" value="AAA799P11_00207"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.206"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003949">
        <property type="term" value="F:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04732">
        <property type="entry name" value="HisA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01014">
        <property type="entry name" value="HisA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006062">
        <property type="entry name" value="His_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006063">
        <property type="entry name" value="HisA_bact_arch"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044524">
        <property type="entry name" value="Isoase_HisA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023016">
        <property type="entry name" value="Isoase_HisA-like_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43090">
        <property type="entry name" value="PTHR43090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00977">
        <property type="entry name" value="His_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00007">
        <property type="entry name" value="TIGR00007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 9" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7 8 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="8"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="236" mass="25983" checksum="BB0A9105F8B200B0" modified="2014-10-29" version="1">MKIIPAIDLMKGQVVRLYKGDPKQKTVYSDNPMSVAKKWQEAGADMLHIVDLDATIGTGSNLDLIEDITKELSIPVEVAGGLRNEEIIDRAISFSTRVVIGTLAFKDKELLQRIAKKYEFSKIVISVDHIAGFIVTHGWQESTKTPLIDAINEFVHMGFTEFLLTNVSKDGTMEGPDLEYLEKACAIQNTNVIASGGISNIDDVSNVQTKNAFAVILGKALYENKISIEEAKQLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S342</accession>
    <name>A0A087S342_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00222</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20146">
        <property type="protein sequence ID" value="KFM20146"/>
        <property type="gene ID" value="AAA799P11_00222"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.216"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="221" mass="25556" checksum="1B0ADB60558CB7B1" modified="2014-10-29" version="1">MTISQNECFVELSSFDDLARYACAFREYPQRVYSQEFNGERIVSSSMILANTLLIFYVPLKKSGRYISYQVTRGKEICDIVESTQNISHYAPVIHMESVISPLPENEENITDQFHPIQVKDLGSLARLTYDPEFPDEQNLTLFALPRKKSWVLGYITSLEMDDVYYNFNYVELDSEPTKNFLKYQGTQGKNPEFSDAVDHGFSYFPIIKIKNEHSVFGFSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S343</accession>
    <name>A0A087S343_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00223</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20147">
        <property type="protein sequence ID" value="KFM20147"/>
        <property type="gene ID" value="AAA799P11_00223"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.217"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="137" mass="16241" checksum="0DCA663A10B55996" modified="2014-10-29" version="1">MSDQEKNNEWDSLWQEYTKSLENWKSLFEQIQTASTEMQSKFNEVWEKASIESSNETMKLFGENWQKAMTDAGMNSFKEFSENWQKALNDSNMSTFKQFVENWQKSLSTSGLEQMNAYGEMMKKFTETWGSMWPKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S346</accession>
    <name>A0A087S346_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00226</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20150">
        <property type="protein sequence ID" value="KFM20150"/>
        <property type="gene ID" value="AAA799P11_00226"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.220"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="12434" checksum="D9E25392D71E6056" modified="2014-10-29" version="1">MNSPNGFFQKLVNLEGRNFSLSIQKFENGYFISVAEGSNKIGSMVASMATGPTPVTTTIIPSRTESLFLKLVAERISTRMRGIALVSAFIQKELDPSTAKDLMSEIIEMIENE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S358</accession>
    <name>A0A087S358_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Iron-sulfur cluster repair protein YtfE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytfE</name>
        <name evidence="2" type="ORF">AAA799P11_00238</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20162">
        <property type="protein sequence ID" value="KFM20162"/>
        <property type="gene ID" value="AAA799P11_00238"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.232"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012312">
        <property type="entry name" value="Hemerythrin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01814">
        <property type="entry name" value="Hemerythrin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hemerythrin" evidence="1">
        <location>
            <begin position="4"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="185" mass="21168" checksum="A945A2942FA7E85A" modified="2014-10-29" version="1">MSTSSLRRDHELIEKVIKAMDATIQLLNENKKIPESILLPVIDFSKNFTDVCHHSKEENSLFPALEQAGLPKNMGPIAMMLIDHERSREIAANMESSAKEYLSSGDSAKLISDMKQYVEHITEHLWKENNRLFMMAEARLQYVAQKVDGELNEIEAKKLKDLGKTRQHYEELAENLTRDVAEQGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S360</accession>
    <name>A0A087S360_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase</fullName>
            <ecNumber evidence="6">1.1.1.302</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">AAA799P11_00240</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2,5-diamino-6-(1-D-ribitylamino)pyrimidin-4(3H)-one 5'-phosphate + NAD(+) = 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:27274"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58890"/>
            <dbReference type="ChEBI" id="CHEBI:59545"/>
            <dbReference type="EC" id="1.1.1.302"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2,5-diamino-6-(1-D-ribitylamino)pyrimidin-4(3H)-one 5'-phosphate + NADP(+) = 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:27278"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58890"/>
            <dbReference type="ChEBI" id="CHEBI:59545"/>
            <dbReference type="EC" id="1.1.1.302"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; riboflavin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the HTP reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.302" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20164">
        <property type="protein sequence ID" value="KFM20164"/>
        <property type="gene ID" value="AAA799P11_00240"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.234"/>
    <dbReference type="UniPathway" id="UPA00275"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008703">
        <property type="term" value="F:5-amino-6-(5-phosphoribosylamino)uracil reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024072">
        <property type="entry name" value="DHFR-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006401">
        <property type="entry name" value="Rib_reduct_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011549">
        <property type="entry name" value="RibD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002734">
        <property type="entry name" value="RibDG_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01872">
        <property type="entry name" value="RibD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53597">
        <property type="entry name" value="SSF53597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01508">
        <property type="entry name" value="rib_reduct_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00227">
        <property type="entry name" value="ribD_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RibD_C" evidence="10">
        <location>
            <begin position="6"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00015035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="218" mass="24265" checksum="44EA65FB38B99EF5" modified="2014-10-29" version="1">MEKSRPHVILSGAISVDGKIATKTNDSKLSSKKDIQRLHKLRSSVDAILVGKNTVSRDDPLLTVRYVKGKNPVRIILDSKGTISKTSKILKSSNKIPTIIAVSKKITKKNLEKLQKFPVEIISVGNDSVNLKLLLKKISKKKIKTLLVEGGGTVNWEFVKQELFDELIVTISPFLIGGEDSISYLRGTGFSKISNSPNLRLKSVKRLKNHIILHYEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F1</accession>
    <name>A0A087S3F1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00002</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20255">
        <property type="protein sequence ID" value="KFM20255"/>
        <property type="gene ID" value="AAA799P11_00002"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.2"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="219" mass="25011" checksum="6437CCE58B258766" modified="2014-10-29" version="1">MNLNQEVRIVRLSLVIAVVASTIGFVVLFVVYPYENSGISLMSGFGKITVLDPKQPSIFENNMYYDNDLAFQLSKPNDSWNISQASESISAQEIEYLKSKGYLEGVYLEKESDKLFLISVFNMQTEDFQLKDYVSKQISSVNSQNNIKIPIKQISQSNDWALLAFDRETNDEDSYSEQLLFLKDNKLYMLQYSGKSPNNLTTLEKSELNLVLDSFEVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G4</accession>
    <name>A0A087S3G4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20268">
        <property type="protein sequence ID" value="KFM20268"/>
        <property type="gene ID" value="AAA799P11_00015"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="4"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="74" mass="8910" checksum="C98853D948528EAB" modified="2014-10-29" version="1">MLVKKEFEKKLANAEKQLKFHIDKKTNLINQLKNTSEYKVRLRLKEKILEQKNLIDIWVSDIKNIEKQLKTSQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I7</accession>
    <name>A0A087S3I7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00038</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20291">
        <property type="protein sequence ID" value="KFM20291"/>
        <property type="gene ID" value="AAA799P11_00038"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.37"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="106" mass="11929" checksum="B8637F97FEF420C6" modified="2014-10-29" version="1">MSATNEFKITQIVDNGQVVQLTLIENVSTEPISQKQMIIENVSKKLDQETKEQVMPLLEAILQAQPTVNIKSYQQTQVTIAMPKSRYEGMGRPQVGNTIEVNLKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I8</accession>
    <name>A0A087S3I8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Thioredox_DsbH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00039</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20292">
        <property type="protein sequence ID" value="KFM20292"/>
        <property type="gene ID" value="AAA799P11_00039"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.38"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02955">
        <property type="entry name" value="SSP411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004879">
        <property type="entry name" value="DUF255"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024705">
        <property type="entry name" value="Ssp411"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42899">
        <property type="entry name" value="PTHR42899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03190">
        <property type="entry name" value="Thioredox_DsbH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006402">
        <property type="entry name" value="UCP006402_thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredox_DsbH" evidence="1">
        <location>
            <begin position="3"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="675" mass="76878" checksum="FB2FAB0175C4AED6" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J5</accession>
    <name>A0A087S3J5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00046</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20299">
        <property type="protein sequence ID" value="KFM20299"/>
        <property type="gene ID" value="AAA799P11_00046"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.45"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="193"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="228" mass="25168" checksum="6C661FD221F75FF0" modified="2014-10-29" version="1">MYNWTDTYEPNDHKYLGLILFAASALLAIILFLVFHPQIDAINKESPILINIMFIPAMAVGFLYGVRITERAVKPSEIRSPFKRSIVKIFLFFFVIGGMFSSVNFAINGGSVMPDVSIFEDGLLPWVNSFITANGGATFLIITSIALMAAATKRIVGMNSGFLNRMVTSVGTFVFFTMLALSFTKSDPTSSGVFLYTFYQAGIVGGAFFAMNRLTKNQNMLEDFSNGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J8</accession>
    <name>A0A087S3J8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00049</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20302">
        <property type="protein sequence ID" value="KFM20302"/>
        <property type="gene ID" value="AAA799P11_00049"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="7539" checksum="EB6C3BE1F05D7080" modified="2014-10-29" version="1">MIISIPLIVIGIIVGILGVIFHLQGQSIVGPKSSFMYSNPDWITYGIQITIAGIIITISGIILKVIRRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L5</accession>
    <name>A0A087S3L5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00066</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20319">
        <property type="protein sequence ID" value="KFM20319"/>
        <property type="gene ID" value="AAA799P11_00066"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="172" mass="19347" checksum="44119705CE96064E" modified="2014-10-29" version="1">MNKHSLIVIISSIVIIGVVGNSVWNIYAVEQLQLSGKDGIFRYYEGMVGQDKIITCNPLFLTTSFNQLYITVFFEGKVKGIFSIDGTSIPPKSSQILDAEFSSESFAEIQYYFLHFDGMFSGTAPIRIDPKKLAIETEFQTPILGIIPFSVTNQYTGIDFWNMLNEDKNSKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M2</accession>
    <name>A0A087S3M2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00073</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20326">
        <property type="protein sequence ID" value="KFM20326"/>
        <property type="gene ID" value="AAA799P11_00073"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.70"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="92" mass="10696" checksum="9338CAA972DDE8FE" modified="2014-10-29" version="1">MVQKLQCCSEKPVFLVTYSVSGSEKDYHVCSVCIKKECFSKYIIRRQILENNKKNFQNEQSGIFDESSGFSENFDEHTIQNERDTERGGFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q6</accession>
    <name>A0A087S3Q6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sensor protein ZraS</fullName>
            <ecNumber evidence="4">2.7.13.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">zraS</name>
        <name evidence="4" type="ORF">AAA799P11_00107</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20360">
        <property type="protein sequence ID" value="KFM20360"/>
        <property type="gene ID" value="AAA799P11_00107"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.105"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="303"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="3">
        <location>
            <begin position="341"/>
            <end position="541"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="545" mass="61423" checksum="076205D680E9812C" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S7</accession>
    <name>A0A087S3S7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methionine synthase protein</fullName>
            <ecNumber evidence="4">2.1.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00128</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.13" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20381">
        <property type="protein sequence ID" value="KFM20381"/>
        <property type="gene ID" value="AAA799P11_00128"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.127"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047150">
        <property type="term" value="F:betaine-homocysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008705">
        <property type="term" value="F:methionine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017226">
        <property type="entry name" value="Betaine-hCys_S-MeTrfase_BHMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037505">
        <property type="entry name" value="Betaine_HMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Hcy-binding" evidence="3">
        <location>
            <begin position="4"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="320" mass="35199" checksum="123ACB72C89523DD" modified="2014-10-29" version="1">MAEKEPFLSALQNRVLLFDGAMGTEIQKFNPKPEDFPNNQDGFNDGLVITHPDWIKQIHRHYLDAGADCIETNSFGSNKIKLDEYGFGDQTIGFNKKIAQLAAEVCQEYSDRPRYVIGSMGPSGFLPSSNDPDLGQKPLDEIREAFELQAEGLILGGVDALLIETSQDILEVKLVIEACHEAMEKTGKKVPIIANTTLDQYGKMLLGTNIQAAYTTVSDMGIDIFGMNCSTGPVEMTPSVRWLDEQNEHNILVVPNAGMPENEGGQAVYKMTPEKMGDALGDFLNQYKKVRIIGGCCGTNPEHIKVLRKVIDEKANSVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3U4</accession>
    <name>A0A087S3U4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase m36 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20398">
        <property type="protein sequence ID" value="KFM20398"/>
        <property type="gene ID" value="AAA799P11_00145"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.145"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007110">
        <property type="entry name" value="Ig-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029865">
        <property type="entry name" value="KIAA0319-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46182">
        <property type="entry name" value="PTHR46182"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50835">
        <property type="entry name" value="IG_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ig-like" evidence="1">
        <location>
            <begin position="500"/>
            <end position="583"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="698" mass="75065" checksum="EAE5DDF055BFC439" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPI7</accession>
    <name>A0A087RPI7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SMC domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01507</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000090">
        <property type="protein sequence ID" value="KFM15391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15391">
        <property type="protein sequence ID" value="KFM15391"/>
        <property type="gene ID" value="AAA799P11_01507"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="39" mass="4341" checksum="AA1F1370CB29D546" modified="2014-10-29" version="1" fragment="single">SLKDSVVQKAKLIYGVFPKNGVSNVVTYKDKRMPSVRTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPL1</accession>
    <name>A0A087RPL1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">V-type H+-transporting ATPase subunit C protein</fullName>
            <ecNumber evidence="1">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01506</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000089">
        <property type="protein sequence ID" value="KFM15415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15415">
        <property type="protein sequence ID" value="KFM15415"/>
        <property type="gene ID" value="AAA799P11_01506"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="38" mass="4209" checksum="DA4CDFC8414AF360" modified="2014-10-29" version="1" fragment="single">GITKLTGFEVRNLAAIAYAVEQKIPTETTMSKLILEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPM5</accession>
    <name>A0A087RPM5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01504</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000088">
        <property type="protein sequence ID" value="KFM15429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15429">
        <property type="protein sequence ID" value="KFM15429"/>
        <property type="gene ID" value="AAA799P11_01504"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1387"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="21"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="89" mass="10577" checksum="E5F2BF629AC55073" modified="2014-10-29" version="1" fragment="single">TNQEMSDIPELSEISDPYAKLEKYKNELEKINQYNQQVLEDLENQIKNSDNEQLEQLNQEIEVVKRVINDNKKELEQVIQRLSEMKSNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQI3</accession>
    <name>A0A087RQI3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01481</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000075">
        <property type="protein sequence ID" value="KFM15737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15737">
        <property type="protein sequence ID" value="KFM15737"/>
        <property type="gene ID" value="AAA799P11_01481"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="34" mass="3973" checksum="C8A09B4AC663E91D" modified="2014-10-29" version="1" fragment="single">MDVRKSKLFKREKMQSIKPRDYPKVAAIIGIIVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQR7</accession>
    <name>A0A087RQR7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01469</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000070">
        <property type="protein sequence ID" value="KFM15821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15821">
        <property type="protein sequence ID" value="KFM15821"/>
        <property type="gene ID" value="AAA799P11_01469"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1375"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="50" mass="5932" checksum="D098577E27BEF731" modified="2014-10-29" version="1" fragment="single">KEEIVFRANHGSNAYTIKGTFPQDKQEMLDKIEWMKQHPEIMRPQGLRGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RR23</accession>
    <name>A0A087RR23_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01457</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000064">
        <property type="protein sequence ID" value="KFM15927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15927">
        <property type="protein sequence ID" value="KFM15927"/>
        <property type="gene ID" value="AAA799P11_01457"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1368"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="104" mass="11698" checksum="35F14CBBCE18B015" modified="2014-10-29" version="1">MIVTTMDYQLYETGYSQSEQLGGGQIGHRAEGMVEFGSNYYTLLGGNSIILRDEIVLKNTGNTPELWSNFESNTNTWKVSGVVFYNLSSMTSGQENELMFEFTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS25</accession>
    <name>A0A087RS25_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000060">
        <property type="protein sequence ID" value="KFM16279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16279">
        <property type="protein sequence ID" value="KFM16279"/>
        <property type="gene ID" value="AAA799P11_01450"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="32" mass="3643" checksum="5CEFA9687144EFDC" modified="2014-10-29" version="1" fragment="single">MYSGELEVQAKRKAIAVLQDEINRILNAAREL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS75</accession>
    <name>A0A087RS75_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Signal transduction histidine-protein kinase AtoS</fullName>
            <ecNumber evidence="3">2.7.13.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">atoS</name>
        <name evidence="3" type="ORF">AAA799P11_01443</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000056">
        <property type="protein sequence ID" value="KFM16329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16329">
        <property type="protein sequence ID" value="KFM16329"/>
        <property type="gene ID" value="AAA799P11_01443"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="2">
        <location>
            <begin position="164"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="301" mass="34630" checksum="B074EFDEBA81264F" modified="2014-10-29" version="1" fragment="single">MNEIKDYAYVKLPDSDPTKKLNELEQNILLLKFGGEVDGLKLNPLDTQFDQDWQLVYDQFKKTKADYEDFKLSSFEQELSPYSLNTLQIDSFILIDHSDKLVNKIGVLIDKTSQMLITLQIILVIVNVVAHVELIILVSKIFNNEFKKNLRMEKLATVGELSSRLAHDMRNPLSYINMSTQLIKSKTSEKETAEKLAIIEKGVSRMSHQINDVMDFVRTKEPDLKLWDLKSILEECFDRLKLPNSVKVTLPERSLLVKCDRTQFEVLFLNLISNAVDSIKNDGSIEVRTHTSPNEIKIEII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSK4</accession>
    <name>A0A087RSK4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-octaprenyl-4-hydroxybenzoate carboxy-lyase protein</fullName>
            <ecNumber evidence="1">4.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000049">
        <property type="protein sequence ID" value="KFM16458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16458">
        <property type="protein sequence ID" value="KFM16458"/>
        <property type="gene ID" value="AAA799P11_01430"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1353"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002830">
        <property type="entry name" value="UbiD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30108">
        <property type="entry name" value="PTHR30108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01977">
        <property type="entry name" value="UbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="209" mass="23204" checksum="4130CEB54FA144D3" modified="2014-10-29" version="1">MIPANRYLSNPSGTGAIDENTVAGSPPIMRRKNPIYVTTVVGKPILEDAYIGKVIERSFLPLIQMFHPEVVDFSMPAAGWFQGFAIISIKKRYPGQAKKVMMGLWGMGQLSLTKMFVVVDEDINVHDINDVIWAITTRADAARDTTIINNTPTDTLDPASPLVNLGSKMGIDATQKTKEEGYEREIQQQVKVDDETKNLVDSKWSDYGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSS2</accession>
    <name>A0A087RSS2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01427</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000048">
        <property type="protein sequence ID" value="KFM16526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16526">
        <property type="protein sequence ID" value="KFM16526"/>
        <property type="gene ID" value="AAA799P11_01427"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1352"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="66" mass="6852" checksum="EED44EA33F9FD99B" modified="2014-10-29" version="1">MAEMLGGFMTESFSGDAAFGTDETTNAESEAILKEAAAVAESSARQMFPSVPTESSASTATTSKFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSX9</accession>
    <name>A0A087RSX9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">V-type ATP synthase beta chain protein</fullName>
            <ecNumber evidence="2">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">atpB</name>
        <name evidence="2" type="ORF">AAA799P11_01420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000046">
        <property type="protein sequence ID" value="KFM16583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16583">
        <property type="protein sequence ID" value="KFM16583"/>
        <property type="gene ID" value="AAA799P11_01420"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1345"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022879">
        <property type="entry name" value="V-ATPase_su_B/beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43389">
        <property type="entry name" value="PTHR43389"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="112" mass="12707" checksum="6746D7B76F2AD080" modified="2014-10-29" version="1">MSLSRLMKDGIGEGSTRADHGEISNQVYDAYSRAQEVRALAGIVGKAGLTEIDLKYMDVGDVFENEFLTQATDENRNIEETLGILWKIVSKLPKNEITKIKDKYVDQYYKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTK7</accession>
    <name>A0A087RTK7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01403</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000042">
        <property type="protein sequence ID" value="KFM16811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16811">
        <property type="protein sequence ID" value="KFM16811"/>
        <property type="gene ID" value="AAA799P11_01403"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="78" mass="8103" checksum="28C0E49B40C9F82C" modified="2014-10-29" version="1">MITGCLSTYSEGLPVTNPHGSVLSSGTIIVVTVFCRLISSLIGVIVVVSEVSAIISDGNIKTANDAIIARNILDFVLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV90</accession>
    <name>A0A087RV90_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribosome-binding ATPase YchF protein</fullName>
            <ecNumber evidence="3">1.17.7.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01352</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.7.1" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17394">
        <property type="protein sequence ID" value="KFM17394"/>
        <property type="gene ID" value="AAA799P11_01352"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1289"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046429">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013646">
        <property type="entry name" value="MMR_HSR1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08438">
        <property type="entry name" value="MMR_HSR1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="2">
        <location>
            <begin position="4"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="398" mass="43795" checksum="5EE6CBED849F7402" modified="2014-10-29" version="1">MRSLQIGLLGKANVGKSTFFSAATETPVSSGNFPFTTIEPNVGVAYVKADCACKHFKIEHQSDLCVKGTRFIPVKLIDIAGLVPGAHEGKGLGNQFLDDARQAEVLIHVIDIAGTTDIQGQPVPPGTHNPLEDVEFVQDEFDLWFADILKREWDKITREIHQKRAKLTDGITKRFTGLGIKDFQVQDVLQKLGFISRDPKEWTEDDIVEFARELRKNTKPMIIAANKADLCPDLEIIKKINDNVIPCSAETELLLRKASKAGIVNYSSGDEGFTVADGKEIAPPQQKALDLVKSVFEKIPSTGIQKILNTAVFDSLNFIVVYPVEDETKLTNKDGVVLPDTKLLPQDSTAKDLAELIHADIAKGFLHAIDCKTKQRISGDQKLKNGDVIKIVSTLSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVI3</accession>
    <name>A0A087RVI3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01319</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17487">
        <property type="protein sequence ID" value="KFM17487"/>
        <property type="gene ID" value="AAA799P11_01319"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1259"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="107" mass="13014" checksum="8F570A3ADC9A8D06" modified="2014-10-29" version="1" fragment="single">KIVWISRIMKNHQDFKKAIDEKTRIKIQQKLNEIREIRNDFAHNFAHNKKIESENVKNRVIKLYDFEEGMTTPKLFKMDEIMDLINDSWILEQLEKLEALTKEIREK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVI8</accession>
    <name>A0A087RVI8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01324</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17492">
        <property type="protein sequence ID" value="KFM17492"/>
        <property type="gene ID" value="AAA799P11_01324"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1264"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="210"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="263" mass="28446" checksum="801B0E4E9CB3D8D7" modified="2014-10-29" version="1">MNPQIVPIHRIESQEDGMLFVRTDGIIDTMVNAPLIVAGLLVVALTMPLQTSFATTRTLDLIINTDGSTHISSQIDVDSSNFELSLFGPSIDNFVAIGEDGTTLPGEVIEDKAMIQTSDYSSITVNYDIHDLISKEGRVWTFSFDSPTSYSLLMPKNSVIVGMDVLPENMEQLNSQIKLEIPTGPAKIDYIFSTPVEIPTTPSEFSFDSVTIGLIVGPIAAAAIASVIVAKKRQSKPQLQTKVIQTTPKPTTIIGIPTPTVII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVP5</accession>
    <name>A0A087RVP5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01309</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000029">
        <property type="protein sequence ID" value="KFM17549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17549">
        <property type="protein sequence ID" value="KFM17549"/>
        <property type="gene ID" value="AAA799P11_01309"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="329" mass="37306" checksum="000A0B598FE275C1" modified="2014-10-29" version="1" fragment="single">MRNQLLDLKTSSTLSRVFQISFPILLGLFIVFFPTDVYSDIFIPESEYTGYYDYQGVYTVVGNVKNQNDFALIPTITISVIDNDETKITHMLNHVPIPPMSDIPFKLKFPEIHGESPTLLNAKLQYIVTEKDPVPIQIIYDRTLITHDDGHVTGRIVNIGNQTVYNPKVYAIVHGYEKYILDVAHNINPIEKIKPGQILNFTIYPDPSVSEPVRFYSCFAPVDTTVIPVTTKKNGGDFDFRYDSGAWYSSAKFDESGTTMTIQGYNSYPLETYANFEFAPISGNEKFSVTLNDEPIEFIQSIDEMGFWHVAFTVEPRSQGILKISGFDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV2</accession>
    <name>A0A087RWV2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Succinyl-CoA ligase ADP-forming subunit alpha 1 protein</fullName>
            <ecNumber evidence="2">6.2.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sucD1</name>
        <name evidence="2" type="ORF">AAA799P11_01264</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.13" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17956">
        <property type="protein sequence ID" value="KFM17956"/>
        <property type="gene ID" value="AAA799P11_01264"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043758">
        <property type="term" value="F:acetate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032875">
        <property type="entry name" value="Succ_CoA_lig_flav_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13607">
        <property type="entry name" value="Succ_CoA_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CoA_binding" evidence="1">
        <location>
            <begin position="6"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="337" mass="36740" checksum="02A95D5056FA856C" modified="2014-10-29" version="1">MAESVVLSPKSIAVIGASDKRGSVGATITSNIMNGFKGTVYPISPTRDTVFYKKAYKSVLDVPKSIDLAVIVIKNTLVAPVLEECGKKKIKGVIIITAGFKEVDEEGAKREQQIKDIAKKYKIQVVGPNCLGVMNLDPKTMMNSTFLKVTPKSGKIALVSQSGAICAALVEDASAQGIGFSAVVSLGNKAAMSEVDVLKILAKHKQTEVIVMYLEDMGDGQEFLKVCKNITKKLKKPVLVLKSGRSPEGAKAAMSHTGALMGSDEIYDALLKQSGAIRVDTMEELFDYATAFSKQPXXXXXXXSNCLKCWWPRNYFHRCMLKSKNQDGRYYKCKKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV4</accession>
    <name>A0A087RWV4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">4-hydroxyphenylacetate 3-monooxygenase oxygenase component protein</fullName>
            <ecNumber evidence="4">4.2.1.120</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hpaH</name>
        <name evidence="4" type="ORF">AAA799P11_01266</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.120" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17958">
        <property type="protein sequence ID" value="KFM17958"/>
        <property type="gene ID" value="AAA799P11_01266"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1214"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043721">
        <property type="term" value="F:4-hydroxybutanoyl-CoA dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004925">
        <property type="entry name" value="HpaB/PvcC/4-BUDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024719">
        <property type="entry name" value="HpaB/PvcC/4-BUDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024674">
        <property type="entry name" value="HpaB/PvcC/4-BUDH_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36117">
        <property type="entry name" value="PTHR36117"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03241">
        <property type="entry name" value="HpaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11794">
        <property type="entry name" value="HpaB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000331">
        <property type="entry name" value="HpaA_HpaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HpaB_N" evidence="3">
        <location>
            <begin position="11"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="HpaB" evidence="2">
        <location>
            <begin position="284"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="508" mass="56755" checksum="CC050864D9CC1359" modified="2014-10-29" version="1">MANVLKTIRSGEDYIESLRGRDLKVYLFGELVKEPVDHPMIRPSINAVAETYDLALREEALASADSSITGLKVNRFLHIAESAEDLVLQNKMQRKLGQNTGTCFQRCVGMDAMNALHSTTFEIDEKHGTDYHKRFLEFVKMVQQENLVIGGAMTDPKGDRSKGPSEQDDPDLFTRIVDTDEKGVYVSGAKAHQTGCINSHWILLMPTIRLTEADKDWAIVGAIPADAKGVTYIYGRQSCDTRSMEEGDIDDGNAKFGGQEALIILDRVFIPWDKVFMHGEYEFASMLVERFTCYHRRSYVCKTGLGDVLIGAAATIADYNGIPKVSHIKDKIIEMTHLNETIFAAGIASSHQGHQMKSGVYLNDDMLAQVCKHNVTRFPYEISRLAQDIAGGLVVTLPSEKDFRHPEAGPLLKKYLAGRKGVDVENRMRILRLIENMTLGRNAVGYLTESMHGAGSPQAQRIQIQRQMQVGYKKNLAKNLAGITNDVEEPVESTEYFKRVFKTKDSVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW9</accession>
    <name>A0A087RWW9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_01286</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17973">
        <property type="protein sequence ID" value="KFM17973"/>
        <property type="gene ID" value="AAA799P11_01286"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034457">
        <property type="entry name" value="Organic_radical-activating"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352">
        <property type="entry name" value="PTHR30352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="6"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM17973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="127" mass="14211" checksum="29CFAEA27F7DE8AE" modified="2014-10-29" version="1">MPQLDKYCQNSDISQRREVQGIDMTPDEVVNTAIKYGAHGIAYTYNEPSIFIEFAKDCGIAARKKGLFNVFVSNGYDTPESVSMMNQFLDGITVDFKGSAEKEFTRKFIGVPDPQXXXXXXXXXXXC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY9</accession>
    <name>A0A087RWY9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17993">
        <property type="protein sequence ID" value="KFM17993"/>
        <property type="gene ID" value="AAA799P11_01263"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="32" mass="3410" checksum="D2C969001A7D9C33" modified="2014-10-29" version="1" fragment="single">MELVSSGDIVYTTEIIPLPEIIPDVSSASFDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX04</accession>
    <name>A0A087RX04_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18008">
        <property type="protein sequence ID" value="KFM18008"/>
        <property type="gene ID" value="AAA799P11_01240"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1196"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="83" mass="9462" checksum="4A145DA57943E276" modified="2014-10-29" version="1">MDEEQRNSEIEKIANLMVHDGVSLDEQDSEKLEKYKNQIKEDCNLNDEDAMKLVYETLLFRKLKSSDSGDLLDKGSDFGAGFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX11</accession>
    <name>A0A087RX11_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative 2-isopropylmalate synthase protein</fullName>
            <ecNumber evidence="3">2.3.3.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01247</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alpha-IPM synthase/homocitrate synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18015">
        <property type="protein sequence ID" value="KFM18015"/>
        <property type="gene ID" value="AAA799P11_01247"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044249">
        <property type="term" value="P:cellular biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002034">
        <property type="entry name" value="AIPM/Hcit_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00815">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00816">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="251" mass="27125" checksum="CB0133C7DD671275" modified="2014-10-29" version="1" fragment="single">MKVRIFDTTLRDGEQTIGVSLSPEQKLSIAKKLDELGVDAIEAGFPVISDGELKAVKMITSEGLSCEIAGLTRTIKKDIDAAVDAGLNYVHTFIATSDIHLEHKLQMTREQALEKAIEAVEYGKSRGLQVEFSAEDASRTDREFLKKVFGEVAKAGADRVNIPDTVGYSTPEYMAQITKDTIEATKLPVSVHCHNDFGLAVANSLAGIHAGAACAHVTINGIGERAGNASLEELSMALKCLPYEQKYETNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX72</accession>
    <name>A0A087RX72_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative cobalt-precorrin-4 C-methyltransferase protein</fullName>
            <ecNumber evidence="2">2.1.1.133</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01233</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.133" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000023">
        <property type="protein sequence ID" value="KFM18076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18076">
        <property type="protein sequence ID" value="KFM18076"/>
        <property type="gene ID" value="AAA799P11_01233"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1187"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046026">
        <property type="term" value="F:precorrin-4 C11-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11473" checksum="C9D376EC5ACBE8EA" modified="2014-10-29" version="1">MSDVFFVGCGPGDPELITVKAKKLIQKADVVVYSGSLIPEPILKFCKKGKLYDAAGMVREEIFDVLYKNAKKDKLVVRLYVHIQFFQQIPLKMKNKFKNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX75</accession>
    <name>A0A087RX75_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Concanavalin A-like lectin/glucanase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01236</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000023">
        <property type="protein sequence ID" value="KFM18079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18079">
        <property type="protein sequence ID" value="KFM18079"/>
        <property type="gene ID" value="AAA799P11_01236"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0430">Lectin</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="570"/>
            <end position="631"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="726"/>
            <end position="784"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1477"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="1477" mass="161446" checksum="EE77CBF664487BEB" modified="2014-10-29" version="1" fragment="single"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH4</accession>
    <name>A0A087RXH4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01204</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18178">
        <property type="protein sequence ID" value="KFM18178"/>
        <property type="gene ID" value="AAA799P11_01204"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="146" mass="16923" checksum="90264E6E8EFEB606" modified="2014-10-29" version="1">MKHVVIILVAVGCSIAVFLGLSVLDMDDLLKGELNSIKTNFGSTFFDCAKTFDELNSLAKKENSKENLITALELGFDMYDNRCFITVESWAHKSQNEQKIWESDWKNQSYLNQLYLEEIPCNNFQCQSIIDKLHDDKKKFELMKNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH7</accession>
    <name>A0A087RXH7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01207</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18181">
        <property type="protein sequence ID" value="KFM18181"/>
        <property type="gene ID" value="AAA799P11_01207"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="9218" checksum="B5ADB7532CB47D9E" modified="2014-10-29" version="1">MEINGNDIIHNRGRPTKQEQQKIQEIIECYFGIDQTYEEIAIETGFNIKTICRYLTPMYEEHRERMCEEILSRHRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM6</accession>
    <name>A0A087RXM6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L29</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpmC</name>
        <name evidence="4" type="synonym">rpl29</name>
        <name evidence="5" type="ORF">AAA799P11_01147</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL29 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18230">
        <property type="protein sequence ID" value="KFM18230"/>
        <property type="gene ID" value="AAA799P11_01147"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1108"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00374">
        <property type="entry name" value="Ribosomal_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001854">
        <property type="entry name" value="Ribosomal_L29/L35"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036049">
        <property type="entry name" value="Ribosomal_L29/L35_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00831">
        <property type="entry name" value="Ribosomal_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46561">
        <property type="entry name" value="SSF46561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00012">
        <property type="entry name" value="L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="7963" checksum="4341C895AA688A96" modified="2014-10-29" version="1">MSRISMKTIRNLNEKDLKSKIQESRSELAKLRVDAAKGTLRKESGKLKPIRHDIARMLTRLNEMRNEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP3</accession>
    <name>A0A087RXP3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4352 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01169</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18247">
        <property type="protein sequence ID" value="KFM18247"/>
        <property type="gene ID" value="AAA799P11_01169"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1126"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029051">
        <property type="entry name" value="DUF4352"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029050">
        <property type="entry name" value="Immunoprotect_excell_Ig-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11611">
        <property type="entry name" value="DUF4352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4352" evidence="3">
        <location>
            <begin position="36"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="162" mass="18156" checksum="687F9E4D73F71EE5" modified="2014-10-29" version="1">MAGLGVIIVIGAILASMGTAMYMYTQYQTNFIESTAGETITVGPVDYVITFEGTHEGDKETQPENTFVMIGITAKYTGDEERTLLSGGQFYIVDEKEQKHEAVYGEFSSKDLLLEWLEPNKPVEKTTQFDIPFDEEKMYKIIIRPQKEQSTVDTAVVCITNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP5</accession>
    <name>A0A087RXP5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01171</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18249">
        <property type="protein sequence ID" value="KFM18249"/>
        <property type="gene ID" value="AAA799P11_01171"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1128"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019920">
        <property type="entry name" value="F420-binding_dom_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011576">
        <property type="entry name" value="Pyridox_Oxase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01243">
        <property type="entry name" value="Putative_PNPOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03618">
        <property type="entry name" value="Rv1155_F420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative_PNPOx" evidence="1">
        <location>
            <begin position="1"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="134" mass="15508" checksum="3AC41165D5602354" modified="2014-10-29" version="1">MDEKAIKLFSEKNLVYIATVMKDGSPQVSPVWANFEDGYILVNTAEGRIKHKNVLRDPRVAVSVVSKDNPLDMTTIRGVVEELIPDYDYKHADKLTQQYMGREHYPFKRESEKRVILKIKPNKVFVLPELKMSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY26</accession>
    <name>A0A087RY26_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01093</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18380">
        <property type="protein sequence ID" value="KFM18380"/>
        <property type="gene ID" value="AAA799P11_01093"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1054"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="86" mass="10081" checksum="4D7B7C1E5F1F048E" modified="2014-10-29" version="1">MSVDVNSQSFKEEMIAEIKRIQNELNELKNLKVNISKKSTARKPAKKTTKRKTAAKKKTVKRKPAKKTTKRKTRRVSKSKKKTRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE6</accession>
    <name>A0A087RYE6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Thermosome subunit beta protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">thsB</name>
        <name evidence="5" type="ORF">AAA799P11_01070</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18500">
        <property type="protein sequence ID" value="KFM18500"/>
        <property type="gene ID" value="AAA799P11_01070"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1032"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03343">
        <property type="entry name" value="cpn60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012714">
        <property type="entry name" value="Thermosome_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="PTHR11353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="SSF48592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="SSF52029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="SSF54849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02339">
        <property type="entry name" value="thermosome_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00750">
        <property type="entry name" value="TCP1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00751">
        <property type="entry name" value="TCP1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="542" mass="58641" checksum="19464E7BF0513EB5" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF4</accession>
    <name>A0A087RYF4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Threonine-phosphate decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.81</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">L-threonine-O-3-phosphate decarboxylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">AAA799P11_01078</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + O-phospho-L-threonine = (R)-1-aminopropan-2-yl phosphate + CO2</text>
            <dbReference type="Rhea" id="RHEA:11492"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58563"/>
            <dbReference type="ChEBI" id="CHEBI:58675"/>
            <dbReference type="EC" id="4.1.1.81"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.81" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18508">
        <property type="protein sequence ID" value="KFM18508"/>
        <property type="gene ID" value="AAA799P11_01078"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1040"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048472">
        <property type="term" value="F:threonine-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005860">
        <property type="entry name" value="CobD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01140">
        <property type="entry name" value="L_thr_O3P_dcar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="8 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="11">
        <location>
            <begin position="29"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM18508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="359" mass="39909" checksum="75B45C4B8A8EDC6D" modified="2014-10-29" version="1">MKIRAKSSIAKHHPVSHGGKFSGGNRQIDVLDFSSNTSPVGMPSSVKSAMKKNLDEMEHYPDTDSLNLVSGLKRYTGLSDSHIVVGNGAIEILYNFCTAFLSKKRVLIPTPTFSEYESASKLADCKFTFFKTMNLSEDIDSFISKIPINGCIFVCNPNNPTGTIIPKKQLTQIISAAKNKSSFVFVDECFIELVPKSNQSIINLVKKYDNLFVLRSLTKSYGLAGIRIGYGVGSKKIIGILKKIKIPWSVNALAQQAGILAIKNKSHLTKSKSIIKKESTFLKKKIAQIPGFECHDSTTNFILIKTKQDSTKIQKKLLKHKILIRDCKNFRGLNNHYIRIAIKSHKDNLKLVNAMEAIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK1</accession>
    <name>A0A087RYK1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01042</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18555">
        <property type="protein sequence ID" value="KFM18555"/>
        <property type="gene ID" value="AAA799P11_01042"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1003"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="211" mass="23624" checksum="5228AA62EFE04F22" modified="2014-10-29" version="1">MNKLIIIPIILGIAAIVSYSMLIPEESSEPLTTPIYNSGFTYYDIETIQTSLKEYDIFVSPPTAITDHTISQYCTFFEKGLPRNVEYCTTTAVLDSDGNTIGNINIGGSTASPILAIANLETDTLESDKETTYAIFTTVIQTLVCDCWEEEESIGFETIPDWLDTVHTFYYDSDERNIKSKIDNLTDTEILFEITSKDNSVLQTLIITKHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK5</accession>
    <name>A0A087RYK5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transcriptional regulator MntR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01046</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DtxR/MntR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18559">
        <property type="protein sequence ID" value="KFM18559"/>
        <property type="gene ID" value="AAA799P11_01046"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1008"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001367">
        <property type="entry name" value="Fe_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036421">
        <property type="entry name" value="Fe_dep_repressor_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022687">
        <property type="entry name" value="HTH_DTXR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022689">
        <property type="entry name" value="Iron_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02742">
        <property type="entry name" value="Fe_dep_repr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01325">
        <property type="entry name" value="Fe_dep_repress"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00529">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47979">
        <property type="entry name" value="SSF47979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50944">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH dtxR-type" evidence="6">
        <location>
            <begin position="24"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="154" mass="17651" checksum="143EB5015DDDCE21" modified="2014-10-29" version="1">MKSKNSKRLDSIKAAHQSERTRSSTRMEDYLEIISELVELKGYATTLDISRHMNVSAPSVTKMLQRLDEGGYLEYEKYHGINLTKKGTEVADGIRQKHGILLEFFEILGIGYDTANQDAEGIEHHLNPKTIKQLRKFITFLKANPKIIENFKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL7</accession>
    <name>A0A087RYL7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Oligopeptide transport ATP-binding protein OppD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">oppD</name>
        <name evidence="6" type="ORF">AAA799P11_01058</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18571">
        <property type="protein sequence ID" value="KFM18571"/>
        <property type="gene ID" value="AAA799P11_01058"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1020"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="311" mass="34653" checksum="07ADFFF50509E3A6" modified="2014-10-29" version="1">MVFLSVNGLTSRYDSSKGPVYAVEDVDFSLNDGESIGIAGESACGKSTLGLSIIRMLLGGKTQGKIVFNDESILDIDETKFNEKFRWKKISMVFQGAMNSLDPVFTINEQFLEILKQHEFEGNTKQVISDAMSSVNLDENVLKKYPHELSGGMKQRVVIAMGLLLKPKFVIADEPTTALDVLIQAQIINLLKSLKKSGMSFMLITHDLAVLSEIADKVGIMYGGQMIEFGSAKEIYKTPKHPYTQGLLKSIPTLKGNKPKYIKGIPPSLLEAPTQCRFIDRCPLVVEKCKQLPPKFKTETGYVRCWLYEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL9</accession>
    <name>A0A087RYL9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aspartate--tRNA ligase</fullName>
            <ecNumber evidence="6">6.1.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Aspartyl-tRNA synthetase</fullName>
            <shortName evidence="6">AspRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">aspS</name>
        <name evidence="8" type="ORF">AAA799P11_01060</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp)</text>
            <dbReference type="Rhea" id="RHEA:19649"/>
            <dbReference type="Rhea" id="RHEA-COMP:9660"/>
            <dbReference type="Rhea" id="RHEA-COMP:9678"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 3 Mg(2+) cations per subunit. The strongest magnesium site (Mg1) is bound to the beta- and gamma-phosphates of ATP and four water molecules complete its coordination sphere.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.12" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18573">
        <property type="protein sequence ID" value="KFM18573"/>
        <property type="gene ID" value="AAA799P11_01060"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1022"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004815">
        <property type="term" value="F:aspartate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006422">
        <property type="term" value="P:aspartyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02075">
        <property type="entry name" value="Asp_tRNA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004523">
        <property type="entry name" value="Asp-tRNA_synthase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43450">
        <property type="entry name" value="PTHR43450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00458">
        <property type="entry name" value="aspS_nondisc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 6 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="7">
        <location>
            <begin position="134"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="region of interest" description="Aspartate" evidence="6">
        <location>
            <begin position="189"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="210"/>
            <end position="212"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="218"/>
            <end position="220"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="351"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="354"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="358"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="399"/>
            <end position="402"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="428" mass="48822" checksum="89C9D0543F747A2A" modified="2014-10-29" version="1">MVFVKTHDISELTSELIGKQVVLGGWIEDLRKLGKMSFITLRDVSGISQVIVKGELNDNLGEINRQSVVSVKGIVQETKARDFAFEIKAEEIEVLGKAIHPLPVDPIGRVESNIDTRLNHRALDMRNQKTASIFKLRHYVLQSLRKTLAGKKFIEITTPKIIGSASEGGANLFSLEYFGKKAYLAQSPQLYKEQMTIGLERVFEISNFYRAENSHTGRHLSEFTSVDIEAAFMDYNDVMDVLESLVMDVYKFTAENCKKEQEIIGHTIEVPKSPFERITYNQCIEELKSAGEKVEFGDDLLDSHLRIIGDNHPGFFFLTDWPMKLKPFYIREKDEDPELSRSFDLQYGYLELSSGGTRLHNPEMLKDRLKEQDLDPAQFTDHLKAFDWGMPPHSGWGMGLDRLMTTLIGIDNVREVVLYPRDPDRLSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYM2</accession>
    <name>A0A087RYM2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01063</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18576">
        <property type="protein sequence ID" value="KFM18576"/>
        <property type="gene ID" value="AAA799P11_01063"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1025"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="90" mass="10401" checksum="507E2FD6CDE9C1FB" modified="2014-10-29" version="1">MTDDRTRCKECYIHKRKLSVKQIVRKNRLVFVFIGFLWFYAVFPGPFMPGLGGGFYVISVVAAVLILIPVCLAMFFWSLNPPKSDVKKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ52</accession>
    <name>A0A087RZ52_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ATP-dependent 26S proteasome regulatory subunit Posttranslational modification protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00965</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AAA ATPase family. CDC48 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18756">
        <property type="protein sequence ID" value="KFM18756"/>
        <property type="gene ID" value="AAA799P11_00965"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.929"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005938">
        <property type="entry name" value="AAA_ATPase_CDC48"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004201">
        <property type="entry name" value="Cdc48_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029067">
        <property type="entry name" value="CDC48_domain_2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003338">
        <property type="entry name" value="CDC4_N-term_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02933">
        <property type="entry name" value="CDC48_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02359">
        <property type="entry name" value="CDC48_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01072">
        <property type="entry name" value="CDC48_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01073">
        <property type="entry name" value="CDC48_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54585">
        <property type="entry name" value="SSF54585"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01243">
        <property type="entry name" value="CDC48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CDC48_N" evidence="4">
        <location>
            <begin position="7"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="CDC48_2" evidence="3">
        <location>
            <begin position="104"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="210"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="483"/>
            <end position="620"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="722" mass="79678" checksum="8BD627F9E80DF898" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ63</accession>
    <name>A0A087RZ63_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">TATA-box-binding protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Box A-binding protein</fullName>
            <shortName evidence="5">BAP</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">TATA sequence-binding protein</fullName>
            <shortName evidence="5">TBP</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">TATA-box factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">tbp</name>
        <name evidence="7" type="ORF">AAA799P11_00976</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the TBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18767">
        <property type="protein sequence ID" value="KFM18767"/>
        <property type="gene ID" value="AAA799P11_00976"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.942"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00408">
        <property type="entry name" value="TATA_bind_prot_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000814">
        <property type="entry name" value="TBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030491">
        <property type="entry name" value="TBP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012295">
        <property type="entry name" value="TBP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10126">
        <property type="entry name" value="PTHR10126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00352">
        <property type="entry name" value="TBP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00686">
        <property type="entry name" value="TIFACTORIID"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00351">
        <property type="entry name" value="TFIID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="repeat" description="1" evidence="5">
        <location>
            <begin position="10"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="repeat" description="2" evidence="5">
        <location>
            <begin position="101"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="186" mass="20880" checksum="5EB0976B9695CC2D" modified="2014-10-29" version="1">MPTTKPIIEIVNVVASAVIDEKLDLTKIQTKIPDIEYYPEQFPGAVFRLRNPKTATLLFSTGKMVCTGSKSEDMARKAVKTVVQKLRKEKIKIKKDAVVTIQNIVSSINLGGKIDLERTARTLPRSMYEPEQFPGVIHRMVDPKTVILLFASGKLVCTGAKTEKDVYRSVNNLHSMLEERDLMLYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ73</accession>
    <name>A0A087RZ73_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Diphtheria toxin repressor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dtxR</name>
        <name evidence="6" type="ORF">AAA799P11_00986</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DtxR/MntR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18777">
        <property type="protein sequence ID" value="KFM18777"/>
        <property type="gene ID" value="AAA799P11_00986"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.952"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001367">
        <property type="entry name" value="Fe_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036421">
        <property type="entry name" value="Fe_dep_repressor_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022687">
        <property type="entry name" value="HTH_DTXR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022689">
        <property type="entry name" value="Iron_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02742">
        <property type="entry name" value="Fe_dep_repr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01325">
        <property type="entry name" value="Fe_dep_repress"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00529">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47979">
        <property type="entry name" value="SSF47979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50944">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH dtxR-type" evidence="5">
        <location>
            <begin position="21"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="17028" checksum="01AAFDD4F6415699" modified="2014-10-29" version="1">MDSLNDEETLFVGTAEAEHVEMYLKAIWHIKERGEEVKISTIAKMLNVRQPSVVQMLKKLNSKNLVTYNKAGVKLTDEGQAIGSSMMRNSRLLEVLMDSALKVDIDEEMVCGIEHHMNKQFTDALCTMLKHPRKCPHDHDIPVGECCKSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ75</accession>
    <name>A0A087RZ75_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cyclic pyranopterin monophosphate synthase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">moaA</name>
        <name evidence="6" type="ORF">AAA799P11_00988</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18779">
        <property type="protein sequence ID" value="KFM18779"/>
        <property type="gene ID" value="AAA799P11_00988"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.954"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034471">
        <property type="entry name" value="7_8-dihydro-6-hydroxymethylpte"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034474">
        <property type="entry name" value="Methyltransferase_Class_D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43306">
        <property type="entry name" value="PTHR43306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00385">
        <property type="entry name" value="7_8-dihydro-6-hydroxymethylpte"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="5">
        <location>
            <begin position="104"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="554" mass="63246" checksum="A133BF1A60F1351F" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ81</accession>
    <name>A0A087RZ81_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">D-glucuronyl C5-epimerase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00994</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18785">
        <property type="protein sequence ID" value="KFM18785"/>
        <property type="gene ID" value="AAA799P11_00994"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="383" mass="44271" checksum="D1F744979BDF0BF1" modified="2014-10-29" version="1">MLCYQLSINFEYLKDWITNSGLIVSDHHDENYGGVYSFYDENEKKYSFLYPEITGYSASTLSFLHEISPNSKLNELAQANTTWLTKIFKKFDAIVQGISSDPKRQKFAYTFDAAICAKGLLDYYKINNSEELLDTAKSLLNWIVPAINNDGTVLPYKNLESNIFGEDSDVWYRKKGNLHIKISIPFIQMYELTKDKSFLDIAKKLCDTYTKYVKKSGSLSIHENTDEINLHTLSYALEGLLFSYASTGSEKYLNCCKNCLNWCSDKIDDDGSINLWFNSKHSSKSIYPVAQIARLMLLVDSIDKSNHYTKNVKKLTEFMYSLQAQNPDPKVNGGFYEEFYKTVFGWKKRKKLNSWGSMFAIQALFWAENPEKIDFKKSIWSLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ83</accession>
    <name>A0A087RZ83_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-N-acetylglucosamine 2-epimerase protein</fullName>
            <ecNumber evidence="2">5.1.3.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00996</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.23" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18787">
        <property type="protein sequence ID" value="KFM18787"/>
        <property type="gene ID" value="AAA799P11_00996"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008761">
        <property type="term" value="F:UDP-N-acetylglucosamine 2-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003331">
        <property type="entry name" value="UDP_GlcNAc_Epimerase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029767">
        <property type="entry name" value="WecB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43174">
        <property type="entry name" value="PTHR43174"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02350">
        <property type="entry name" value="Epimerase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00236">
        <property type="entry name" value="wecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase_2" evidence="1">
        <location>
            <begin position="25"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="350" mass="39588" checksum="D0C9E4386E9B5971" modified="2014-10-29" version="1">MKACLIVGTRPQIIKSQPIINEFKKRRIKLFVIHTGQHYDYKMSKSFFDELEIPNPDYNLGISKGSSGKQLGEIISKLELHLKKINPDVVIVPGDTRSALGGALAANSLGIPIAHIESGARSYDPKMEEETNRRLIDHMSSYLFAPTPNCLKNLKSESVLGKISLSGDTMYDVFLQYKKILKLTNKKENFILMTIHRRENILNKKKISGIISTAKKLSQHGHDVVFPIHPHTKKQIKSYGLSLTGIKVINPLKYSEILKMISNSSLLITDSGGLQKEAFWLNTRCVTIRENTEWIETLKSKNNQLLTKITPNDYKKIEKILGKKFSSYKTKLFGNGNASKKIVSILFKQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB0</accession>
    <name>A0A087RZB0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M10A protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18814">
        <property type="protein sequence ID" value="KFM18814"/>
        <property type="gene ID" value="AAA799P11_00935"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021190">
        <property type="entry name" value="Pept_M10A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00138">
        <property type="entry name" value="MATRIXIN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M10" evidence="1">
        <location>
            <begin position="187"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="247" mass="27965" checksum="AFFD176EFE2DB166" modified="2014-10-29" version="1">MQPMQHLEFADYNDHIAGIDFLEEPQTIYKDELRSGYFIQNLRGDTIDTWISWNVVGDDLFHVHLQDSPEVTDRLQQAVVDVIMSDDSFLIDDSEQHKGPKGTVSRYYLGWQGALNSIDANTERDIPKNLHFHVTDKCEGNVIIYLKNYASADGFSGFTNSIVDESNNQILKSTITIYDVDSLSAEGFKTILRHELGHSFGLAHSTAQEDLMHPVILTNYPYISDCTLDGIIHLYDNNDESSVVCDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC8</accession>
    <name>A0A087RZC8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00953</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18832">
        <property type="protein sequence ID" value="KFM18832"/>
        <property type="gene ID" value="AAA799P11_00953"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="119" mass="14081" checksum="6BA1AD61C02F6046" modified="2014-10-29" version="1">MESEKYQKIYEAIQNMDSKIRFITIIDYEGRLLFGGQREGVSNYLKPDHQKESLRHAMDAWKLRDKFSNYIGKGKYAIVEYEKIKRISIPFEENKMIYLTTEVDADHQSIVNSILKLVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI0</accession>
    <name>A0A087RZI0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">O-acetylhomoserine-lyase protein</fullName>
            <ecNumber evidence="2">2.5.1.49</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.49" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18884">
        <property type="protein sequence ID" value="KFM18884"/>
        <property type="gene ID" value="AAA799P11_00915"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.878"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003961">
        <property type="term" value="F:O-acetylhomoserine aminocarboxypropyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA_binding" evidence="1">
        <location>
            <begin position="14"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="136" mass="15398" checksum="B9DE8046B11A8E5A" modified="2014-10-29" version="1">MEKDDHSDKQIQDILSLKKVAVIGMSKNSSKAAHYVPRYLSENGFDITPVNPTTNEILGKKCYDSVSDIDEDVDIVDVFRPSDEVLPFVEEAIKKKLKVIWLQEGIHNPEAEKLARNAGIDVVFNRCMLAEHQRLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI6</accession>
    <name>A0A087RZI6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Xanthine phosphoribosyltransferase protein</fullName>
            <ecNumber evidence="1">2.4.2.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gpt</name>
        <name evidence="1" type="ORF">AAA799P11_00921</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.22" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18890">
        <property type="protein sequence ID" value="KFM18890"/>
        <property type="gene ID" value="AAA799P11_00921"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.884"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000310">
        <property type="term" value="F:xanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="15628" checksum="C5769E56F9E93D5E" modified="2014-10-29" version="1">MLSQNVDWYEIEFLVKKLSNKISKLPRTFSSITTLSRGGLVPARLVADHLGIKKIFVDKKKISSDSLFVDDIFDSGDTFDEIIKRVDVPSKFVYATLFARRGKKYPKQLLYGKKTNNNAYVVFPWDKLEFERSQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM3</accession>
    <name>A0A087RZM3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00868</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18927">
        <property type="protein sequence ID" value="KFM18927"/>
        <property type="gene ID" value="AAA799P11_00868"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.834"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="46" mass="5239" checksum="D41D0C0C1EA1C5C2" modified="2014-10-29" version="1">MAERRTIMIDEDVAKKVRNLQAKKIKETAGTVSFSAVINEMLRECN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZP2</accession>
    <name>A0A087RZP2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Isopentenyl phosphate kinase</fullName>
            <ecNumber evidence="3">2.7.4.26</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00892</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + isopentenyl phosphate = ADP + isopentenyl diphosphate</text>
            <dbReference type="Rhea" id="RHEA:33963"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:65078"/>
            <dbReference type="ChEBI" id="CHEBI:128769"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.26"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the isopentenyl phosphate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.26" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18946">
        <property type="protein sequence ID" value="KFM18946"/>
        <property type="gene ID" value="AAA799P11_00892"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.854"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102043">
        <property type="term" value="F:isopentenyl phosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024192">
        <property type="entry name" value="Fosfomycin_R_FomA-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43654:SF1">
        <property type="entry name" value="PTHR43654:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="6">
        <location>
            <begin position="2"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00017267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="97" mass="11088" checksum="7940B7388FCEED4A" modified="2014-10-29" version="1">MILIKLGGSIITNKEKPLSARRKTIDNLAKSLKKIREPIIIVHGGGSYGHYWSVKYDMHTKERKYDLRGVAIVKNSMIELNKIILDSFLKNKLNPIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR3</accession>
    <name>A0A087RZR3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00819</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18967">
        <property type="protein sequence ID" value="KFM18967"/>
        <property type="gene ID" value="AAA799P11_00819"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.782"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="217" mass="24554" checksum="73C4053C30F1CAFE" modified="2014-10-29" version="1">MIYETQMKTNPKMIVGLKGIIPGGVSAKDFSAVTKMSKDESKSILDEFTKNQIGTKQDDFYYFEEGDKLKIAISLLEKGLPIDEISVALDWKDFEGLTAEILSSKNFAVLKNMILTKPRMEIDVVGIRLGVAMLIDCKHWKRYSMSSLSSVVKKQIERTKQYVAKTEGAIAVPVIVTLYQDKVNFIENVPIVPIFQFSSFVDEFYGNIDQMKTIEKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS4</accession>
    <name>A0A087RZS4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative tyrosine recombinase XerC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00830</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18978">
        <property type="protein sequence ID" value="KFM18978"/>
        <property type="gene ID" value="AAA799P11_00830"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="115"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="181" mass="21458" checksum="92C718D9B994BEBC" modified="2014-10-29" version="1">MTFLKTDRTKQTFEDRLAKKAPGIRELYKIAFKNFEKFCSEQYSRSADEVITEFTLVEEQAVYDTIQDWIDWNITQGKGSATIRMWFSCINNYLRYKGVKIESKENIDFPKKKEEEMYPLQIEDIHKILSIASYNKKCLYLCQISSGMRIAELLQLKKKDLEIKERIIVKIPADYTKLKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT3</accession>
    <name>A0A087RZT3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Trans-aconitate 2-methyltransferase protein</fullName>
            <ecNumber evidence="1">2.1.1.144</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tam</name>
        <name evidence="1" type="ORF">AAA799P11_00839</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.144" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18987">
        <property type="protein sequence ID" value="KFM18987"/>
        <property type="gene ID" value="AAA799P11_00839"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.806"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="207" mass="24280" checksum="F5993C6B71408A91" modified="2014-10-29" version="1">MDKVRKTFDSWAQSGRAELMEVEHGKNVSKFLNTISFDKPFSFLDVGCGNGWVVRNIAKESNCKKAIGIDKSKKMIIQAKKKKDSKKEEFVHTDIESWKYRGKFDFIFSMEALYYSDSIEKALKRIYKLLKPGGQFFCGTDFYTDNKATARWADVMKIQMHLHSKKEWKEFFKNAGFQVKTKHIKDLKSRKKWKREFGTLFIIGTKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT9</accession>
    <name>A0A087RZT9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-acyl-carrier-protein reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG</name>
        <name evidence="1" type="ORF">AAA799P11_00845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18993">
        <property type="protein sequence ID" value="KFM18993"/>
        <property type="gene ID" value="AAA799P11_00845"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.812"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="27131" checksum="21AD9BBA4592F3C9" modified="2014-10-29" version="1">MKLNDKVAIVTGASSDIGKGIAKKFVEEGAKVILIARNLEGLEKARKEIGNENSTAPITCDLTDESQTLQAVNQIMDTYGKIDVLVNNAGAINDPIHFHEMPNSEIQKLINVNLLGVFNMTKAVLTKMADVKSGSIVNIGSISSERAIPRVHLAVYSATKAAIPMFTKSIAVEYARRNIRCNCVNPGIINSGSIKPYLDDPQARKVLEERLPLARVGEPEDVANAVAYLASDEASWVTGTILNVDGGKTASEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M5</accession>
    <name>A0A087S0M5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00802</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19279">
        <property type="protein sequence ID" value="KFM19279"/>
        <property type="gene ID" value="AAA799P11_00802"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.769"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005372">
        <property type="entry name" value="UPF0182"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39344">
        <property type="entry name" value="PTHR39344"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03699">
        <property type="entry name" value="UPF0182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="183"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="229"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="261"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="297"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="951" mass="106960" checksum="C278BE8EAB10E827" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M9</accession>
    <name>A0A087S0M9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glycine--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">glyQS</name>
        <name evidence="7" type="ORF">AAA799P11_00806</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19283">
        <property type="protein sequence ID" value="KFM19283"/>
        <property type="gene ID" value="AAA799P11_00806"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.773"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027031">
        <property type="entry name" value="Gly-tRNA_synthase/POLG2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002315">
        <property type="entry name" value="tRNA-synt_gly"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10745">
        <property type="entry name" value="PTHR10745"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01043">
        <property type="entry name" value="TRNASYNTHGLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00389">
        <property type="entry name" value="glyS_dimeric"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="6">
        <location>
            <begin position="2"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="485" mass="55554" checksum="17798B925FF8F98D" modified="2014-10-29" version="1">MDYEAVMKLALERGFYFPSCEVYADAQAGFWEYGPTGVGLKNKFLELWRRELIRRDGMLEIDGSQIMSKSVFEASGHLGNFADPIIKCAKCNSTFRADRTIAELAQIEIPESADLEEFDNAINQNNIKCPKCKGDFDKTKNFNMMFKVGIGPEEEEAYLRPETCQSIFVDFPRLYKTMRGKLPLGIAQVGKSFRNEIAPRQSLLRLREFYQAEIEVFCNPSKLDKVEKFSEIQDTVIRVQTDAEPVSMTCKEAIESGTVPNKFVAYYLGILTEFYEKTGIDISKSRFRKLGDKEKAFYAEVAFDFEVETTIGWLELVACNYRSDYDLSSHANKSKEKFEVMDNDDKVLPHVFEISMGIDRSLYTILEHSLKDDKEHERIVLSLKPYLSPIHAGILSLVKKDGLKEKTDEIYLSIKRKFDAFLDHSGAIGRRYRRLDEVGAPFAVTVDHQTLEDDTVTLRKRDSMEQTRIKISEIDSILLESVAFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S107</accession>
    <name>A0A087S107_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF5679 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19411">
        <property type="protein sequence ID" value="KFM19411"/>
        <property type="gene ID" value="AAA799P11_00735"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.708"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044044">
        <property type="entry name" value="DUF5679"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18930">
        <property type="entry name" value="DUF5679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5679" evidence="1">
        <location>
            <begin position="15"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="57" mass="6262" checksum="276E68FBEDAB2C7B" modified="2014-10-29" version="1">MLIEPEPSERMTIGYCVKCRDKREIGGAKPYTMKNGKPAIKGTCPTCSTAIFRIGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S129</accession>
    <name>A0A087S129_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">FO synthase subunit 2 protein</fullName>
            <ecNumber evidence="8">2.5.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cofH</name>
        <name evidence="8" type="ORF">AAA799P11_00757</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.77" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19433">
        <property type="protein sequence ID" value="KFM19433"/>
        <property type="gene ID" value="AAA799P11_00757"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.730"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045567">
        <property type="entry name" value="CofH/MnqC-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034405">
        <property type="entry name" value="F420"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020050">
        <property type="entry name" value="FO_synthase_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43076">
        <property type="entry name" value="PTHR43076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19288">
        <property type="entry name" value="CofH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00343">
        <property type="entry name" value="aminofutalosine_synthase_(mqnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00423">
        <property type="entry name" value="TIGR00423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="61"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="372" mass="41613" checksum="4428EA035A973DA1" modified="2014-10-29" version="1">MMRVDYGMLEQLIGDSQALDRAIAGEDLSYKDGLELMNYDNLHLLGAVADARRKELVGDTVTFAASYYMNYTNVCTASCQMCAFYRKDGAEDAYTLTPQEIEQRVGIAKQMGATEVHIVGGFHPKLPLEYYEDMMKIIKKNHPQLNIKALTAAEIFYLSKLTKNSTKEILSRLKDAGLDSMPGGGAELFHPEIRKKIVRGKCTGQEWLDVIEEAHNMGIKSNVTMLYGHIEKPEHIVDHLIKIRDLQKKTNGFITLIPLKFSLDNTELEQEHLVNNECSSVYDLRVIALSRLMLANYLNNISVYWVAYGKKLAQVALSNGGSDLVGTAFSEEIYRAAGKATSSSVDELATMVKEIGRTPAQRNTHFGILKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A7</accession>
    <name>A0A087S1A7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Zinc finger C2H2 type domain signature protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00712</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19511">
        <property type="protein sequence ID" value="KFM19511"/>
        <property type="gene ID" value="AAA799P11_00712"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.682"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="14"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="55" mass="6177" checksum="07BE3AE3E4F8983A" modified="2014-10-29" version="1">MGLFKRNKDKESKTKCDTCGTELHDPERLKRHMKKAHGNVPAKKLDPNAGDGGTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B0</accession>
    <name>A0A087S1B0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rossmann fold nucleotide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19514">
        <property type="protein sequence ID" value="KFM19514"/>
        <property type="gene ID" value="AAA799P11_00715"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.685"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005268">
        <property type="entry name" value="CHP00725"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041164">
        <property type="entry name" value="LDcluster4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18306">
        <property type="entry name" value="LDcluster4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00725">
        <property type="entry name" value="TIGR00725"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="169" mass="17739" checksum="86C1D0E050499CC0" modified="2014-10-29" version="1">MVKRRQILVIGHNTKGCLPEHEKIAYEVGSEIAKSDSVLICGGLGGVMTAAAHGAKDAGGLTIGIIPQNDPVEANEYCDVVIPTGMGLARDFLNALSADGVVIVGGGSGTLSETCAAYMHKKPMVAIRNLDSSIDPFIDGYIDHRENIKIVGVDTPQEAVKKILELISA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B1</accession>
    <name>A0A087S1B1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00716</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19515">
        <property type="protein sequence ID" value="KFM19515"/>
        <property type="gene ID" value="AAA799P11_00716"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="40" mass="4755" checksum="5087C9D5D486663C" modified="2014-10-29" version="1">MERRSMPVCFTEKQYKMIEEYAKRNGMLNASQALEKILSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B7</accession>
    <name>A0A087S1B7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00722</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19521">
        <property type="protein sequence ID" value="KFM19521"/>
        <property type="gene ID" value="AAA799P11_00722"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.694"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="15730" checksum="ED7160BAD9596EC1" modified="2014-10-29" version="1">MDFQKIFDWKTYIFTAIAVISFSNFMAVLFGKTIPVIILDFFKVAGEYVVLGAVFVFALAWLLKAKPHNRPKQYSVVVFDVYGKKSQIEGLRTEFKTHDVAWSFMKQYKKSYPLYNFALVSDLPKSDKPTIFRYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F5</accession>
    <name>A0A087S1F5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00548</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19559">
        <property type="protein sequence ID" value="KFM19559"/>
        <property type="gene ID" value="AAA799P11_00548"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="53" mass="6100" checksum="4F3E2F9C1B2AB430" modified="2014-10-29" version="1">MFEKSSLDIYLFDDLILIKNKNGKEKSFPRCGITDVELFVMEMAKKGELSDLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G6</accession>
    <name>A0A087S1G6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Argininosuccinate synthase</fullName>
            <ecNumber evidence="2 9">6.3.4.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Citrulline--aspartate ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">argG</name>
        <name evidence="10" type="ORF">AAA799P11_00559</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-aspartate + L-citrulline = 2-(N(omega)-L-arginino)succinate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10932"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57472"/>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.4.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the argininosuccinate synthase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.5" evidence="2 9"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19570">
        <property type="protein sequence ID" value="KFM19570"/>
        <property type="gene ID" value="AAA799P11_00559"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.543"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004055">
        <property type="term" value="F:argininosuccinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01999">
        <property type="entry name" value="Argininosuccinate_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00005">
        <property type="entry name" value="Arg_succ_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001518">
        <property type="entry name" value="Arginosuc_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018223">
        <property type="entry name" value="Arginosuc_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023434">
        <property type="entry name" value="Arginosuc_synth_type_1_subfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024074">
        <property type="entry name" value="AS_cat/multimer_dom_body"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11587">
        <property type="entry name" value="PTHR11587"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00764">
        <property type="entry name" value="Arginosuc_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69864">
        <property type="entry name" value="SSF69864"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00032">
        <property type="entry name" value="argG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00564">
        <property type="entry name" value="ARGININOSUCCIN_SYN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 9" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="8"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="256"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="399" mass="44562" checksum="5D5D2FF6A54D81DA" modified="2014-10-29" version="1">MTQKGILAFSGGLDTSVVVKYLQDEHDMDVVTVTVDVGQDEDNKKIAAKAKKLGVKKHYNIDARKEFVKDYIFPSIKANALYQKKYCLATALARPLIAEKVLEIAKKEKVTSLAHGCSGKGNDQVRFDITLRSGSNLPIIAPIRDKNLDRVTELKFANKHGIKIDNVAKKFSIDQNLWGRAIEGGVLEDPYNEPPDDAFIWVKTKNLPDKPTYLEIKFAKGIPVGVDGKTMDGQKLIEYINKKAGAAGVGIVDHIEDRVVGIKSREVYETPAATCLIEAHSDLEKMVHTKHENKFKSIIDDEWAYLAYSGLWQDPLKSDLDGFIETSQKPVTGTVKLKLYKGSLRVVGRKSKNSLYSHEIATYGTESTFDQRLAKGFVELWGMQSTEANKLQKKRSEKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H1</accession>
    <name>A0A087S1H1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative [LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase</fullName>
            <ecNumber evidence="2">2.6.1.118</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">argD</name>
        <name evidence="2" type="synonym">lysJ</name>
        <name evidence="4" type="ORF">AAA799P11_00564</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Involved in both the arginine and lysine biosynthetic pathways.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2-oxoglutarate + [amino-group carrier protein]-C-terminal-gamma-(L-lysyl)-L-glutamate = [amino-group carrier protein]-C-terminal-N-(1-carboxy-5-oxopentan-1-yl)-L-glutamine + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:41952"/>
            <dbReference type="Rhea" id="RHEA-COMP:9714"/>
            <dbReference type="Rhea" id="RHEA-COMP:9715"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:78501"/>
            <dbReference type="ChEBI" id="CHEBI:78526"/>
            <dbReference type="EC" id="2.6.1.118"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2-oxoglutarate + [amino-group carrier protein]-C-terminal-gamma-(L-ornithyl)-L-glutamate = [amino-group carrier protein]-C-terminal-gamma-(L-glutamyl-5-semialdehyde)-L-glutamate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:52672"/>
            <dbReference type="Rhea" id="RHEA-COMP:13327"/>
            <dbReference type="Rhea" id="RHEA-COMP:13328"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:136761"/>
            <dbReference type="ChEBI" id="CHEBI:136763"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
        <text evidence="2">Binds 1 pyridoxal phosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-arginine biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-lysine biosynthesis via AAA pathway; L-lysine from L-alpha-aminoadipate (Thermus route): step 4/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.118" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19575">
        <property type="protein sequence ID" value="KFM19575"/>
        <property type="gene ID" value="AAA799P11_00564"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.548"/>
    <dbReference type="UniPathway" id="UPA00033">
        <property type="reaction ID" value="UER00038"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042450">
        <property type="term" value="P:arginine biosynthetic process via ornithine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019878">
        <property type="term" value="P:lysine biosynthetic process via aminoadipic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02084">
        <property type="entry name" value="LysJ_aminotrans_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004636">
        <property type="entry name" value="AcOrn/SuccOrn_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037537">
        <property type="entry name" value="LysJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00707">
        <property type="entry name" value="argD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="1 2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="100"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="212"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="270"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="393" mass="43241" checksum="9272F84255E92E16" modified="2014-10-29" version="1">MSEDQYMGNLYQRFPVTVEKGKGAHVWDVDGKEYIDCMGGYGVALVGHQNQRVNNAIKEQVDKIITVHSSLYNKTREEFLKILIGLAPEGLTQVHLNNSGAEAIEAAMKFARKFTGKKGMVAMKGSYHGKSFGALSLTFNPKYKKAFAPLVEKVSFASYGDIESLREVIDEDTAFVILEPIQGESGIIVAPDGFLQEVRKLCDEKGILLIFDEIQAGLGRTGRLWACDHWNTAPDILCLAKGIAGGVPMGATLVRPDILDSMSKGEHSSTFGGNPISCAAGIAALKSITEDGLIENSEKMGKVFREGLEKLKEKHTMIREIRGKGLMIGIEMKFEVRDILMGLIREGVLMLYSGRNILRILPPLVITEEDVTKVLHALDIILTEEEKKRSVQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I4</accession>
    <name>A0A087S1I4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inosine-5'-monophosphate dehydrogenase protein</fullName>
            <ecNumber evidence="3">1.1.1.205</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00577</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19588">
        <property type="protein sequence ID" value="KFM19588"/>
        <property type="gene ID" value="AAA799P11_00577"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.562"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="16"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="80"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="132" mass="14306" checksum="0FBAB5CEA5F2D1EE" modified="2014-10-29" version="1">MSSDTVQQKTLVREIMSNSVISIDSSVTATDAAKMMEDSGVGAITVLENGSPVGIVTDRDFAIKITAHSYPIDTPIRRIMSSPLISIDPDSDLWTASDLMSTRNIRKLPVIDDDRIIGIITSSDLVKHFASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J1</accession>
    <name>A0A087S1J1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TOPRIM domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00584</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19595">
        <property type="protein sequence ID" value="KFM19595"/>
        <property type="gene ID" value="AAA799P11_00584"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.568"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Toprim" evidence="1">
        <location>
            <begin position="23"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="125" mass="14689" checksum="6463E9867B104A9E" modified="2014-10-29" version="1">MLVTEQEISELQNFVFQLNSVRDGVVVVEGKRDFNALRKLGYQGKILEFHKFGGINNFADSAAKYKKIILLFDRDRKGRYLTGKTIQLLQRRTKLDLSYKRKLRQITKGKIMFIEQLVCYESYFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M5</accession>
    <name>A0A087S1M5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AAA ATPase domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00618</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19629">
        <property type="protein sequence ID" value="KFM19629"/>
        <property type="gene ID" value="AAA799P11_00618"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.604"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041685">
        <property type="entry name" value="AAA_15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13175">
        <property type="entry name" value="AAA_15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_15" evidence="1">
        <location>
            <begin position="1"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="697" mass="81008" checksum="BA2A081DA8538018" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N7</accession>
    <name>A0A087S1N7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">rio1</name>
        <name evidence="12" type="ORF">AAA799P11_00630</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19641">
        <property type="protein sequence ID" value="KFM19641"/>
        <property type="gene ID" value="AAA799P11_00630"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.616"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000687">
        <property type="entry name" value="RIO_kinase"/>
    </dbReference>
    <dbReference type="SMART" id="SM00090">
        <property type="entry name" value="RIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RIO" evidence="11">
        <location>
            <begin position="29"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM19641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="259" mass="29507" checksum="7E04319B4A86F92E" modified="2014-10-29" version="1">MTDILSKKLESKLDKKLISKSKRKTLDDGFKKGKVVNEVLDKPTVMTLYKMITDHIIAYVNGAVSAGKESVLFWGVDEKDSNVALKIYLVSTSNFKKREPYILGDPRFSNVKKGTKNLVYLWAKKEYRNLTQCFEVGIPVPKPLYVTNNVLAMEFVGENGAPAKLLLDSEVDENDYHQSIQIITDMYQKAKLVHGDFSEYNVFKTKNGLIVFDLGSAVDLRHPNTQEFLKRDINNITRFFKKRGISVEDPDELFGDIVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P1</accession>
    <name>A0A087S1P1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00634</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19645">
        <property type="protein sequence ID" value="KFM19645"/>
        <property type="gene ID" value="AAA799P11_00634"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.620"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="166" mass="18709" checksum="BE34C330C54FC442" modified="2014-10-29" version="1">MASKKGIAITIIILAAITGASFLVWTIPQQNETTFIVTDYENYLDGVKEIHEILQKSTDIEFQRLLDGEITPEQYVETAEVTSSQVTSQIGEFVTSKPPEEWQDSYISYMDAMRKFNAYIGETKVVANLIENESSQDEISEVMKKIESLKEESTELVKISDDSRPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P2</accession>
    <name>A0A087S1P2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19646">
        <property type="protein sequence ID" value="KFM19646"/>
        <property type="gene ID" value="AAA799P11_00635"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.621"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007254">
        <property type="entry name" value="DUF373"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38815">
        <property type="entry name" value="PTHR38815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04123">
        <property type="entry name" value="DUF373"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="149" mass="16120" checksum="026EC1309A39A8C6" modified="2014-10-29" version="1">MSQRSDKIEKDVNASTANRLLVICVDRDNDVGEKAGIVTPVVGRDACIEAAQRLALEDPEDADSNSIFSAIKTYEDLVSKGYQVEVVTIAGVKDRGVQADEKILSETRKVLERFSANGAVIVSDGEDDESVIPVIQNVLFSSKSCDESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W4</accession>
    <name>A0A087S1W4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Superoxide dismutase</fullName>
            <ecNumber evidence="2 6">1.15.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sodA</name>
        <name evidence="9" type="ORF">AAA799P11_00458</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Destroys radicals which are normally produced within the cells and which are toxic to biological systems.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2 H(+) + 2 superoxide = H2O2 + O2</text>
            <dbReference type="Rhea" id="RHEA:20696"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:18421"/>
            <dbReference type="EC" id="1.15.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the iron/manganese superoxide dismutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.15.1.1" evidence="2 6"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19718">
        <property type="protein sequence ID" value="KFM19718"/>
        <property type="gene ID" value="AAA799P11_00458"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.438"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004784">
        <property type="term" value="F:superoxide dismutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001189">
        <property type="entry name" value="Mn/Fe_SOD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019833">
        <property type="entry name" value="Mn/Fe_SOD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019832">
        <property type="entry name" value="Mn/Fe_SOD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019831">
        <property type="entry name" value="Mn/Fe_SOD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036324">
        <property type="entry name" value="Mn/Fe_SOD_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036314">
        <property type="entry name" value="SOD_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02777">
        <property type="entry name" value="Sod_Fe_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00081">
        <property type="entry name" value="Sod_Fe_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000349">
        <property type="entry name" value="SODismutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01703">
        <property type="entry name" value="MNSODISMTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46609">
        <property type="entry name" value="SSF46609"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54719">
        <property type="entry name" value="SSF54719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00088">
        <property type="entry name" value="SOD_MN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sod_Fe_N" evidence="7">
        <location>
            <begin position="3"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Sod_Fe_C" evidence="8">
        <location>
            <begin position="99"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000349-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="207" mass="24120" checksum="118E4658F3F93949" modified="2014-10-29" version="1">MVQYELPRLPYGYDELEPYIDTETMTIHHQKHHQSYVDGLNKSLAEIGSASHPQYITSILSDLTPIPESGRNKINFFGGGFENHRLFWETMTPNGDGSPGGKIEDAIDVYFDNFENFKQIFSNKAIAIQGSGWCWMVFNSTYNKIEIISTENQTSPWTLQKIPLLGLDVWEHAYYLKHQNRRPDYVKDWWNVVNWDYVENRFSELSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X9</accession>
    <name>A0A087S1X9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Mov34-MPN-PAD-1 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00473</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19733">
        <property type="protein sequence ID" value="KFM19733"/>
        <property type="gene ID" value="AAA799P11_00473"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.456"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028090">
        <property type="entry name" value="JAB_dom_prok"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14464">
        <property type="entry name" value="Prok-JAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Prok-JAB" evidence="6">
        <location>
            <begin position="16"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF14464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="132" mass="14562" checksum="476017E16E4A1CB1" modified="2014-10-29" version="1">MLFKKKKFERKVVLQKEVLDSILSYCQMKHPNEGILILKGKSKNGEINIDGLVIPPFNYTGPTFAGFPHSFLPFDMSYVGIVHSHPSGSAEPSVTDLNNFFGLVSIIVKSPYSDDSIFAWDSGGNAIPLSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S205</accession>
    <name>A0A087S205_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transposase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tnp1</name>
        <name evidence="4" type="ORF">AAA799P11_00504</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19759">
        <property type="protein sequence ID" value="KFM19759"/>
        <property type="gene ID" value="AAA799P11_00504"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032874">
        <property type="entry name" value="DDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13610">
        <property type="entry name" value="DDE_Tnp_IS240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="2">
        <location>
            <begin position="38"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="Integrase catalytic" evidence="3">
        <location>
            <begin position="190"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="379" mass="43878" checksum="6067A2E3E5BBA213" modified="2014-10-29" version="1">MNARKQRAIAMMEIKGHCSQIDSDNFSVRSQSNPKNRYTVSKTENGLRCQCKDYTCRKADCKHIKIVLEIIKNNQCYRNNTFRIMERSKLSLCKYCDSGKIRKDGMRNTKKGKVQRFKCLDCKKRFTTNFGFEKKQNDDSIITGSLEMYFSGMSVRDISRQYRRMGIKISHMTIYRWVAQYSKLGSEYVEKIVPRVGDWIRADEAFIRVNGKMNYLFSTMDDETRFWLIGEMADTKFQHQADKLLVSTVNMTQKTPRAFITDGLPAYAKSAKRVFGKETHHISNVGINSRRKSGKIHPTNNKMERLNGEIRDREKVFRGLKKKDTPLIAGLKLWYNFSKEHGGLGGDVTPSESALIKVDGDNKWKTIIQNASLYRENSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S217</accession>
    <name>A0A087S217_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-galactoside alpha-26-sialyltransferase sialyltransferase 1 protein</fullName>
            <ecNumber evidence="2">2.4.99.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00516</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.99.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19771">
        <property type="protein sequence ID" value="KFM19771"/>
        <property type="gene ID" value="AAA799P11_00516"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.498"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003835">
        <property type="term" value="F:beta-galactoside alpha-2,6-sialyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006334">
        <property type="term" value="P:nucleosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005819">
        <property type="entry name" value="H1/H5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00624">
        <property type="entry name" value="HISTONEH5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="120"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="164" mass="19528" checksum="B4DAD21DBF6B641C" modified="2014-10-29" version="1">MAAKRKAAPKRKAAPKRKAAKRKAAPKRKAAPKRREKQLKERLQLKKQLQREKPQKERQLQREKPQKERQLQREKQLQREKQLNEKPLQREKQLQREKQLNEKPLQREKQLQREAKRKTAAKKAAPKRKAAKRKAAPKRKAAPKRKAAPKRKAAPKRKAAKRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S299</accession>
    <name>A0A087S299_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative lipid phosphate phosphatase YodM protein</fullName>
            <ecNumber evidence="3">3.1.3.68</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yodM</name>
        <name evidence="3" type="ORF">AAA799P11_00382</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.68" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19853">
        <property type="protein sequence ID" value="KFM19853"/>
        <property type="gene ID" value="AAA799P11_00382"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.371"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003850">
        <property type="term" value="F:2-deoxyglucose-6-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="193"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="2">
        <location>
            <begin position="84"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="222" mass="24995" checksum="83BA833979459DCA" modified="2014-10-29" version="1">MQSWLFDIRSRSFVLLTILFLVLTGLVYSGITESFDQNIISFFSENVGNPTLDIIMQYVTESGDVFNMLIFGIVILIIPKTRRIGITLMILIVLSTLLTGYIKCGIDRDRPDFDYEGVEFPVEISRDTFALFCEGGFDASYPSGHAARAMIFGIILGYALSERFPRGAYLLFLYPVMISLSRIYVLQHYPMDVIGGTVIGIMLAGVMANRTKLYKIFDKSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D7</accession>
    <name>A0A087S2D7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00430</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19891">
        <property type="protein sequence ID" value="KFM19891"/>
        <property type="gene ID" value="AAA799P11_00430"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.409"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_L23/L15e_core_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="SSF54189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="107"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="126"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="149" mass="16539" checksum="50BB1752C0D43451" modified="2014-10-29" version="1">MKYLKDFGYMSIIETITDVDNTFLSRRELTCNFAGLAGKLKKLEAIDMITKEFKLDGKVVIPMRLQTHVGKPIVTGTFFVYEDEGLAKKHVNPTIFARLEKSKAKLAEAEAAEAPVEEAPAEVSSDDAPTEEKAAESPSEEPKEEEKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2D8</accession>
    <name>A0A087S2D8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00431</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19892">
        <property type="protein sequence ID" value="KFM19892"/>
        <property type="gene ID" value="AAA799P11_00431"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.410"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005500">
        <property type="entry name" value="DUF309"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023203">
        <property type="entry name" value="TTHA0068_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03745">
        <property type="entry name" value="DUF309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140663">
        <property type="entry name" value="SSF140663"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="186" mass="21476" checksum="5BAA84C78EC75EFE" modified="2014-10-29" version="1">MERYMLHLKNTRYGPENSREVVYKARDLASDMNASIRVARIAKKFVELDVSVEKEDLDTLIEKLSPIGPVDNIRHVVEEEIDKEKGIADGIFYFNNERFWESHEAFEGVWKKCFGREKEVVQGIILMAVAFAHAQKDELSIGLGMLRRVLEKLGTSPSTYHSIDVDRIRTKAVEMQQENKLTTFEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E6</accession>
    <name>A0A087S2E6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00439</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19900">
        <property type="protein sequence ID" value="KFM19900"/>
        <property type="gene ID" value="AAA799P11_00439"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="8379" checksum="3F455ED95B623F40" modified="2014-10-29" version="1">MTEIDSLKSENQKLREYVSLINAELELSQRVSEIKHNFVNSPVSERIIKPILDRISKIQSEKLSLQKELNLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E9</accession>
    <name>A0A087S2E9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">T-protein</fullName>
            <ecNumber evidence="2">1.3.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tyrA</name>
        <name evidence="2" type="ORF">AAA799P11_00442</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.12" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19903">
        <property type="protein sequence ID" value="KFM19903"/>
        <property type="gene ID" value="AAA799P11_00442"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.423"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008977">
        <property type="term" value="F:prephenate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004665">
        <property type="term" value="F:prephenate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006571">
        <property type="term" value="P:tyrosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003099">
        <property type="entry name" value="Prephen_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02153">
        <property type="entry name" value="PDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51176">
        <property type="entry name" value="PDH_ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prephenate/arogenate dehydrogenase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="283" mass="31443" checksum="24E325A0C9820581" modified="2014-10-29" version="1">MKKVTVIGAGGQMGQWFAKYFAGKGFEVTGFDSENKIPGKGIIQSESLVGAILKAEYVVLCTPTRRTPEIIRLIAKEMKRGTYLIEISSEKSKVVSSLSKMPAKINPICIHPMFGPGVKTIKGQNIISVPIKDAKKELTVTKSLFEGANFVTIDAAEHDKKIAVILGLTHLMNLVFANIVSKDEKMLLTEKMSGTTFRVQKTLAESIMTESPELIETIIANPEIRRVAEELWKDIGRLLTAVQESKTEEVVNYIKDCQDRLAKHTDINESYKKLTKMVKAVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2F5</accession>
    <name>A0A087S2F5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-dehydroquinate dehydratase protein</fullName>
            <ecNumber evidence="1">4.2.1.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">aroD</name>
        <name evidence="1" type="ORF">AAA799P11_00448</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19909">
        <property type="protein sequence ID" value="KFM19909"/>
        <property type="gene ID" value="AAA799P11_00448"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="30" mass="3281" checksum="8AFEE8497CAA1F06" modified="2014-10-29" version="1" fragment="single">SPYTYVSLGKPVAPGQFSVDEVNKITNLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M4</accession>
    <name>A0A087S2M4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00282</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19978">
        <property type="protein sequence ID" value="KFM19978"/>
        <property type="gene ID" value="AAA799P11_00282"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.275"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="97" mass="11482" checksum="B8D2CAFA5DA3DE46" modified="2014-10-29" version="1">MASIIVIPIIIVATIGLAGYLVYKYAMYDYICKRSVNKTLQKYNIGKTPSQIIKEYYEEKGEKKSHKEIQDLEKYYRQEEPDQFLAMYDSIREKQKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M9</accession>
    <name>A0A087S2M9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00287</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19983">
        <property type="protein sequence ID" value="KFM19983"/>
        <property type="gene ID" value="AAA799P11_00287"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.280"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="237" mass="27133" checksum="6681EEF1ABB2ED3D" modified="2014-10-29" version="1">MRFYIVLPVFFLLIIGTTASLAYAQVDALNDIKFLQTGIIETSENEFSISNDIAVREFFGGNIIRVYGQTIEGFPYITYSKILEGEINTHGIIFVGGEFLRLSFEEKPIQESPIEKEDDLQIIVQYTQRVYSKQYATIEIKTYDPEQNKLKDFNQNYGFLANINIEIIVLNENNEEFYSTNGITNNKGFFETEFYIPERYPQETLTVTINAEDNDSKSSKILQVFTLGAIPDNDSSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N0</accession>
    <name>A0A087S2N0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative C4-dicarboxylate response regulator DctR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00288</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19984">
        <property type="protein sequence ID" value="KFM19984"/>
        <property type="gene ID" value="AAA799P11_00288"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024187">
        <property type="entry name" value="Sig_transdc_resp-reg_cit/mal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040572">
        <property type="entry name" value="TackOD1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45526">
        <property type="entry name" value="PTHR45526"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18551">
        <property type="entry name" value="TackOD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="6"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="319" mass="36568" checksum="E7958492A8FA8735" modified="2014-10-29" version="1">MGEKNDILIVEDSAAVGMLLKSYLEKLGYTEIHTCDTGETAISTFAELVSQGKPPVVLLDYMLPDMDARSVLTQMLEVKPDVRVILETATEKEDAGIKELIRLGVYQYLEKPIRFEKLKDVFDTIEKEQSFFMKESKQMELLKQAEKEAEEKIQGHIDFILKSANQISFNKIVAILGFSDDTIINYLKKLQEEGKITPLGEKKEIACNRCDSVKTSQIFFCPNCKSSNFKLGKLIEHYDCGNITEESTYHNDECPNCNKQIKALGVDYRVMKNHYICNNCDEFFPEISIEYLCLKCENKFSMEDARWKSSVNYKAVNMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N2</accession>
    <name>A0A087S2N2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Poly-beta-16-N-acetyl-D-glucosamine synthase protein</fullName>
            <ecNumber evidence="3">2.4.1.214</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">icaA</name>
        <name evidence="3" type="ORF">AAA799P11_00290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.214" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19986">
        <property type="protein sequence ID" value="KFM19986"/>
        <property type="gene ID" value="AAA799P11_00290"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.283"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018392">
        <property type="term" value="F:glycoprotein 3-alpha-L-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="264"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="296"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="325"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="22"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="367" mass="41000" checksum="39DFAF2BFCE5259D" modified="2014-10-29" version="1">MAVLSKYREEIQPDVESYPKISIIIPAYNEEKVIANTIESLIETKYPKKEIIFVDDGSKDNTLRIATQYKDQIKILHKENGGKATALNYGIQYSTGEIIVIVDADTIIGRQSLKEIVKGFEVDEHVAAVAGNIKVRNANNWLTKCQALEYITGIQIVRRAFDVFGSITIVPGALGAFKKSYLSEAGAYGKDTIVEDFDQTIKLLKAGLITQGSAKATAYTEAPNTLKDFVAQRKRWYRGNMQVLKRHVDALTNPRYGYLQKLSLPYLFLGMVVTPIIGFTATANAILGVIMGDGWYVLQVSLIFTTVHYLMTALALRIDEEDQKLLWYAGFLVFGFKQIVDALLLKAIIEQLRNKKATWTSATRIGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R3</accession>
    <name>A0A087S2R3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00322</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20017">
        <property type="protein sequence ID" value="KFM20017"/>
        <property type="gene ID" value="AAA799P11_00322"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="41" mass="4333" checksum="7A814AFCC7ACC6EB" modified="2014-10-29" version="1">MSNGGKGVSNDTPLTEKVRATAQVSKQIGVSTTTFERANNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T2</accession>
    <name>A0A087S2T2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cobalamin adenosyltransferase protein</fullName>
            <ecNumber evidence="5">2.5.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00346</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.17" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20036">
        <property type="protein sequence ID" value="KFM20036"/>
        <property type="gene ID" value="AAA799P11_00346"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.335"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008817">
        <property type="term" value="F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016030">
        <property type="entry name" value="CblAdoTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036451">
        <property type="entry name" value="CblAdoTrfase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029499">
        <property type="entry name" value="PduO-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12213">
        <property type="entry name" value="PTHR12213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01923">
        <property type="entry name" value="Cob_adeno_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89028">
        <property type="entry name" value="SSF89028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00636">
        <property type="entry name" value="PduO_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cob_adeno_trans" evidence="4">
        <location>
            <begin position="3"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="178" mass="20051" checksum="1863E6B05DA73030" modified="2014-10-29" version="1">MKIYTKTGDDGNTGLQGKLRISKSHPRIIAYGAVDESNAALGIVLTNQLDEDILNILRKIQNDLFVVGADLSNPNLNDVKNRVTLEMIQELEKNIDKFESELPPLTSFILPGGSVPASQLHFTRTIVRRAETLIVQLAEKDEINSNCMIYLNRLSDLFFVMSRLINKRNGNEDIPWKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z6</accession>
    <name>A0A087S2Z6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00171</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20100">
        <property type="protein sequence ID" value="KFM20100"/>
        <property type="gene ID" value="AAA799P11_00171"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="143" mass="17414" checksum="BEBA351E421BFAA5" modified="2014-10-29" version="1">MKQSNKYSLKIVTKNDFEFLFELLKERKQYENISHKNLPTYKNHVKFVNSKPYSKWYIIFQNEDRVGSVYLTQINEIGMHIKNNTDIDEIFKEIISEVIKKNPRKRYLINLNPKNHKLVKNLKRNDFKLIQHTYELTSFKKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S368</accession>
    <name>A0A087S368_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative C4-dicarboxylate response regulator DctR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dctR</name>
        <name evidence="2" type="ORF">AAA799P11_00248</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20172">
        <property type="protein sequence ID" value="KFM20172"/>
        <property type="gene ID" value="AAA799P11_00248"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.242"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="1">
        <location>
            <begin position="4"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="116" mass="12817" checksum="E66757FD1A58A8A7" modified="2014-10-29" version="1">MSKSVIIIDDDEDTVRLFSEFLEEKGINVVGNGFDGVTAVKLYKKLKPDVTLIDLNMPNGSGFYAIKKIQELQPDAHIIAVTADTSAETEEKLTKLNVPVVQKPFNIEHIVSSIND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S387</accession>
    <name>A0A087S387_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">XRE family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00267</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20191">
        <property type="protein sequence ID" value="KFM20191"/>
        <property type="gene ID" value="AAA799P11_00267"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="81"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="254" mass="28496" checksum="10E4F0E694321346" modified="2014-10-29" version="1">MGISHGVHKYPLLGRVEYLREILLQLLVTEILFHVPSSKVLSYYTRVIQIRYSSGAKVLKNNINNPSLLLQYPSFPDLTQIKEMREALKISLPKLEKHTGVKRSLLRKLESGEASTSYKNATAIFSYLVNAVNTTKKTVGVFSNHDIVSVVPLDSVEKARNIMNENKFDVLPIITKSGALRGQINIFKLNPKKIKDESKITVEEIAEEAPVSVPHHIPVHWIRGFLQEPGSCVMITKGGKFIGIINLHHLIVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F5</accession>
    <name>A0A087S3F5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00006</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20259">
        <property type="protein sequence ID" value="KFM20259"/>
        <property type="gene ID" value="AAA799P11_00006"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="213" mass="22747" checksum="1DEAF42AB89EAF20" modified="2014-10-29" version="1">MKLLLLLLFSFIVSGGAVANAFAHTEVTVEDYVVDIGWGDEPPVVGFRNFIVIEILQEKDGELIKVPDAFQDLQAFARSGGASKELDIITDSESGAYHANIIPTKVGTIAIKLRGDISGTMVDIQVPIEDVEGTAVLDFPPTAGSSSDQDIASIKNAINSFQSDMSEVKSNLSGINVNSNQFDSEFIYNFGVIGMATGIAGTVLAIFSILKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H8</accession>
    <name>A0A087S3H8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Na antiporter NhaA 2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00029</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20282">
        <property type="protein sequence ID" value="KFM20282"/>
        <property type="gene ID" value="AAA799P11_00029"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.29"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="71"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="265" mass="29511" checksum="26C766AE6016F8FE" modified="2014-10-29" version="1">MSFEDGEIKQNEISQNKSRSNGLIIGLIVAVGAAAFFAGMYVSNINSNQISQEDLDNAIAKLELKMLQNRLPTNQPSPPVNISADDDPIIGNPDAPITIIEFSDFQCPFCARFHVQTLPLLLDEYIEQGKVKLVFRDFPIQSIHPNALPAAVAAECANEQGQFKAMHDMLFDNQNQWNDQETVEALTMFSQYATQIQLDQETFDSCLTSGKYIEEIRNDLEDGRSYDVTGTPGFFIGNDEIGYVELKGAQPFESFKKVIDAQLEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K6</accession>
    <name>A0A087S3K6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00057</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20310">
        <property type="protein sequence ID" value="KFM20310"/>
        <property type="gene ID" value="AAA799P11_00057"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="8517" checksum="47D68200E204A90C" modified="2014-10-29" version="1">MNLCKGVCERFEVKIKGQNIKYENNQKRCPVCEIFMICLDVRCPCCSCVLRVTPRANKARKSFHKRRNESRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M1</accession>
    <name>A0A087S3M1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00072</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20325">
        <property type="protein sequence ID" value="KFM20325"/>
        <property type="gene ID" value="AAA799P11_00072"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.69"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="132"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="235"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="324"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="500" mass="57312" checksum="18B53585574968D9" modified="2014-10-29" version="1">MRKPYSDETRNDVVEKYLLGESVREIHDSTGVSTGSISEYINDFVSKIERKTIDTIHDFFKIIRKNGMQPKDAFYGHVVFSILLKHNLDPKQIHSFVKSVLSMAKQNELSAERLIGLCNTVSTIQSNSDVPLHEIENHCAELVKTKDELELSIDKLSNQHKQSQSNLYALLKKNKLTEQQVEKTIHALKFLENFGFSLSDADSVCNMLQNAKSQGYDVSKICSYLGQDKSVDLRLREKQLKLDDVEKRTHKLEKNHEELSLMHENLLLRHKSVAESVDSVECLAKNGVLEKDIVYWQKIFDTFGLTPADFLAELEKAGNAKKLFRKLNSVNTKLKKECESLEKKKSWLEDKSEELSSEISNGAEFGKKNLKKITDHAELQINNAVTITKKSLGDFMKQNQIQMNLTQKQYKEYFSDLVSNLENLLEHSHKAEHSLSKMESLKPLYDLVNGKFDLLVSIPQVIIILDKLYVGLKNSNLDKHMLYSDVKRIRENLLDLLSHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M6</accession>
    <name>A0A087S3M6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Elongation factor 1-beta</fullName>
            <shortName evidence="6">EF-1-beta</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">aEF-1beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">ef1b</name>
        <name evidence="8" type="ORF">AAA799P11_00077</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the EF-1-beta/EF-1-delta family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20330">
        <property type="protein sequence ID" value="KFM20330"/>
        <property type="gene ID" value="AAA799P11_00077"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.74"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00292">
        <property type="entry name" value="EF1B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00043">
        <property type="entry name" value="EF1_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036219">
        <property type="entry name" value="eEF-1beta-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014038">
        <property type="entry name" value="EF1B_bsu/dsu_GNE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014717">
        <property type="entry name" value="Transl_elong_EF1B/ribosomal_S6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004542">
        <property type="entry name" value="Transl_elong_EF1B_B_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39647">
        <property type="entry name" value="PTHR39647"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00736">
        <property type="entry name" value="EF1_GNE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006521">
        <property type="entry name" value="Transl_elong_EF1B_B_arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00888">
        <property type="entry name" value="EF1_GNE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54984">
        <property type="entry name" value="SSF54984"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00489">
        <property type="entry name" value="aEF-1_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 8" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF1_GNE" evidence="7">
        <location>
            <begin position="3"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM20330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="10327" checksum="BF4629AEAC047E81" modified="2014-10-29" version="1">MAQLLFVTKILPEGTEVDLDKLAETLKNSLPEGISMKRHAKEPLAFGLEFLKAEFVLEDKEGQSDALENAVKGIEGVSEFEVLNMSRMSVDMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P4</accession>
    <name>A0A087S3P4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA-directed RNA polymerase subunit Rpo7</fullName>
            <ecNumber evidence="5">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">DNA-directed RNA polymerase subunit E</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pnp</name>
        <name evidence="5" type="synonym">rpo7</name>
        <name evidence="5" type="synonym">rpoE</name>
        <name evidence="8" type="ORF">AAA799P11_00095</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">DNA-dependent RNA polymerase (RNAP) catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the RNA polymerase complex. Forms a stalk with Rpo4 that extends from the main structure.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">Forms 2 domains with an elongated structure; Rpo4 packs into the hinge region between the 2 domains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20348">
        <property type="protein sequence ID" value="KFM20348"/>
        <property type="gene ID" value="AAA799P11_00095"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.92"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00865">
        <property type="entry name" value="RNApol_arch_Rpo7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036898">
        <property type="entry name" value="RNA_pol_Rpb7-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004519">
        <property type="entry name" value="RNAP_E/RPC8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046399">
        <property type="entry name" value="RNApol_Rpo7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045113">
        <property type="entry name" value="Rpb7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005576">
        <property type="entry name" value="Rpb7-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12709">
        <property type="entry name" value="PTHR12709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03876">
        <property type="entry name" value="SHS2_Rpb7-N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88798">
        <property type="entry name" value="SSF88798"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00448">
        <property type="entry name" value="rpoE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S1 motif" evidence="7">
        <location>
            <begin position="82"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="179"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM20348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="198" mass="21516" checksum="83D7A47159E7FE7E" modified="2014-10-29" version="1">MFSISTLVDVVRIPPSLFGTTLKKAAVNILKEKYESMINADLGYIIMILDAKVDEMGKMIAGDGGTFHRVQFEALTFYPKLQEIVQGEIVDITDFGAFVRIGPTDALLHLSQVMDDYLKSDVKSGMILANQSGRTLKVGSTLRARITAVSLGKAAAMGKIGITCRQPFLGADEWIEEEIKKSSGDAEEPAKEAKVEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P7</accession>
    <name>A0A087S3P7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TPR repeat domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00098</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20351">
        <property type="protein sequence ID" value="KFM20351"/>
        <property type="gene ID" value="AAA799P11_00098"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.95"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="54"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="15394" checksum="40F4E2F825BABACA" modified="2014-10-29" version="1">MTILVGLFSRTPKDPNHKKHAEKFKEFKKLAKQKKYDKALKSGTEYLRMVPNNHDALFTVGGIYYLKKKYKTAIYHFDKALEIGSYDVDVLLLKAYSHQKLGEKKRALQCCEKIQEVDPKNKTVSELLSQLNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T2</accession>
    <name>A0A087S3T2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00133</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20386">
        <property type="protein sequence ID" value="KFM20386"/>
        <property type="gene ID" value="AAA799P11_00133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="89" mass="10671" checksum="5486B2C478F45129" modified="2014-10-29" version="1">MEKLLHSKKPRILHEKNKTQKLFDTCKLGGRWKRTDRFVPHHYVSLDDGAFLKLTMDGANYTELFRFKKNSEIIIKDSIVEFYEKDLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T5</accession>
    <name>A0A087S3T5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00136</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20389">
        <property type="protein sequence ID" value="KFM20389"/>
        <property type="gene ID" value="AAA799P11_00136"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="91" mass="10764" checksum="D8E44903A4BC9941" modified="2014-10-29" version="1">MLNSADVNIRTKVIWELKYCMTKLQQLQKLVEEKGELMVMSDTGEKFELHKHNVKFDESSDLVEIDGGTKKFWLIPSKIAYYWTHDKAREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RMP4</accession>
    <name>A0A087RMP4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01528</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000105">
        <property type="protein sequence ID" value="KFM14748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14748">
        <property type="protein sequence ID" value="KFM14748"/>
        <property type="gene ID" value="AAA799P11_01528"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="19" mass="2214" checksum="DF075E6E8C952971" modified="2014-10-29" version="1" fragment="single">IDDLVEHYLLEHDGDINGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPM4</accession>
    <name>A0A087RPM4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01503</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000088">
        <property type="protein sequence ID" value="KFM15428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15428">
        <property type="protein sequence ID" value="KFM15428"/>
        <property type="gene ID" value="AAA799P11_01503"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="22" mass="2299" checksum="677F2837B8482763" modified="2014-10-29" version="1" fragment="single">MCDIKLGIGMAKGIFLFLAGSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQ48</accession>
    <name>A0A087RQ48_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein PmbA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pmbA</name>
        <name evidence="3" type="ORF">AAA799P11_01492</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000081">
        <property type="protein sequence ID" value="KFM15602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15602">
        <property type="protein sequence ID" value="KFM15602"/>
        <property type="gene ID" value="AAA799P11_01492"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1383"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045569">
        <property type="entry name" value="Metalloprtase-TldD/E_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036059">
        <property type="entry name" value="TldD/PmbA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19289">
        <property type="entry name" value="PmbA_TldD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111283">
        <property type="entry name" value="SSF111283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PmbA_TldD_C" evidence="2">
        <location>
            <begin position="5"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM15602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="146" mass="15976" checksum="3DAAAD611909680E" modified="2014-10-29" version="1" fragment="single">SNLFDSYKENQKSTGNASRIGSPMGRSSEPITISAPHNLKIDSGKSSQEDTIKDTKHGILIGRLWYTYAVNPIKGDFSCTARSGVRIIENGEIKNPGKSVRIIHNLPTMLKNISDIGNNQQNVIQWASLPSITPSIKAEKIKVTSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQV3</accession>
    <name>A0A087RQV3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01465</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000067">
        <property type="protein sequence ID" value="KFM15857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15857">
        <property type="protein sequence ID" value="KFM15857"/>
        <property type="gene ID" value="AAA799P11_01465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM15857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="136" mass="14244" checksum="FBF36E1CFF40D2F2" modified="2014-10-29" version="1" fragment="single">MIDQIWLIGLGFAAGILGSIIGLGGGIIVVPVLTFLGFPPTAAASNSLFAALSNAIASTISYSRQKRIEYSLGIKLGLLSIPGTILGAVISTDVTPGVFKILFGLVLIASAAYIFLRKKIESKEKKLSTQMMVFAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQY9</accession>
    <name>A0A087RQY9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Rhomboid family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01461</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000066">
        <property type="protein sequence ID" value="KFM15893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15893">
        <property type="protein sequence ID" value="KFM15893"/>
        <property type="gene ID" value="AAA799P11_01461"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1370"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="SSF144091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="90"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Rhomboid" evidence="6">
        <location>
            <begin position="2"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM15893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="129" mass="14117" checksum="825C4DE4F72FCF99" modified="2014-10-29" version="1" fragment="single">LAWGIGAGLAHIVIDPTSSIPAVGASGAISGVLGAYLAMFPRVKITTFLMLGFFWRMMHIQARWFLPFWLVFQNLLPFFIGGFGVAGGGVAYMAHIGGFAIGFATGYLYKKTHSSEYTYGTRYGYRPDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RR18</accession>
    <name>A0A087RR18_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000065">
        <property type="protein sequence ID" value="KFM15922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15922">
        <property type="protein sequence ID" value="KFM15922"/>
        <property type="gene ID" value="AAA799P11_01460"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="7755" checksum="A7F14A937252E721" modified="2014-10-29" version="1" fragment="single">MRGMGYMFAVGVFFAIFFNSAYAQTMGDQTTLSGDLQNNPVAQDILKKIEQSKKWIAQIEKRNFENSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSU9</accession>
    <name>A0A087RSU9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01422</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000047">
        <property type="protein sequence ID" value="KFM16553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16553">
        <property type="protein sequence ID" value="KFM16553"/>
        <property type="gene ID" value="AAA799P11_01422"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1347"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="59" mass="6866" checksum="1BC29151A03757CC" modified="2014-10-29" version="1" fragment="single">NEKLVLKQKLENKNIPKEPIRKGIEILEQLAKEHGIEYSPETLGRYVKKRLLTQIPTQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSV2</accession>
    <name>A0A087RSV2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000047">
        <property type="protein sequence ID" value="KFM16556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16556">
        <property type="protein sequence ID" value="KFM16556"/>
        <property type="gene ID" value="AAA799P11_01425"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1350"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="48" mass="5663" checksum="EF33108E041B40B5" modified="2014-10-29" version="1" fragment="single">NEKLVLKQKLENKNIPKEPIRKGIEILEQLAKEISEMGQDKVIEKYQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSX8</accession>
    <name>A0A087RSX8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">V-type ATP synthase subunit D</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5 6">V-ATPase subunit D</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">atpD</name>
        <name evidence="7" type="ORF">AAA799P11_01419</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Produces ATP from ADP in the presence of a proton gradient across the membrane.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the V-ATPase D subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000046">
        <property type="protein sequence ID" value="KFM16582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16582">
        <property type="protein sequence ID" value="KFM16582"/>
        <property type="gene ID" value="AAA799P11_01419"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1344"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042777">
        <property type="term" value="P:proton motive force-driven plasma membrane ATP synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00271">
        <property type="entry name" value="ATP_synth_D_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002699">
        <property type="entry name" value="V_ATPase_D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11671">
        <property type="entry name" value="PTHR11671"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01813">
        <property type="entry name" value="ATP-synt_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00309">
        <property type="entry name" value="V_ATPase_subD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="6" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM16582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="209" mass="23564" checksum="319F94D3B2D857C4" modified="2014-10-29" version="1">MSFGQNVAATKIELFKYKKSSQVAVMVQKILDDKRKVLLKNIEEMIEEASKARGGIWEPLQDIYNSVNEAYLALGSSTVDSVAESTPSVMEVDVNVRRVVDVKIPALSVTEKDTKSMPYGFADTNSSIDRAAKQIKELLPKICKAAEYENSIFSLAKALEKTQKLLNALENVIIPQYQEKVRFIVATLEEREREEFAKLKKVKAKMESR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RT64</accession>
    <name>A0A087RT64_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Deoxyguanosinetriphosphate triphosphohydrolase-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000045">
        <property type="protein sequence ID" value="KFM16668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16668">
        <property type="protein sequence ID" value="KFM16668"/>
        <property type="gene ID" value="AAA799P11_01415"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1342"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045509">
        <property type="entry name" value="HD_assoc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19276">
        <property type="entry name" value="HD_assoc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="7"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="364" mass="41349" checksum="18BA62B2EFF477BE" modified="2014-10-29" version="1" fragment="single">PAAQHTRFEHSLGVMHISSQAGRILNEKEFLKSDDIEILRLAGLLHDIGHGPFSHLFEEIIQEKKISHEDFGKEIILKSEIGDILTKNGFDKKLVTKIAFGDSKFQYMNEIVSGALSADMMDYLLRDGYFTGAEHAKIDHKRITQSLDVHKKKLALERSALYSFESMMHSRYQMFKAVYFHKTVRAAEVMLLEALRSSDDEFGFSTFNLDEFVQLTDEYVLSSLLSSKTSKLKRARKFAQDYQNRKLLKCVFESILTSRKNLKKTKTNELRSAISKKSKVDENEIFIDSSVTPSIPLAPSKNESKSVILITNESGKSSAKEMPISEIPVVSAISGFMNILRIYTHQKNRKKVEIAAKSIISELE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RT65</accession>
    <name>A0A087RT65_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uridylate kinase protein</fullName>
            <ecNumber evidence="2">2.7.4.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pyrH</name>
        <name evidence="2" type="ORF">AAA799P11_01416</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.22" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000045">
        <property type="protein sequence ID" value="KFM16669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16669">
        <property type="protein sequence ID" value="KFM16669"/>
        <property type="gene ID" value="AAA799P11_01416"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033862">
        <property type="term" value="F:UMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="7965" checksum="B344E077BBF5EDFC" modified="2014-10-29" version="1" fragment="single">MKKRIVIKLSGRVFAMDNVKLLKDWAEFLVNISKVCQPIIIAGGGNIARHYINHARSSGADESTLDELGIEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTL2</accession>
    <name>A0A087RTL2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01408</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000042">
        <property type="protein sequence ID" value="KFM16816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16816">
        <property type="protein sequence ID" value="KFM16816"/>
        <property type="gene ID" value="AAA799P11_01408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="134"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="241" mass="26812" checksum="1777975264CA035C" modified="2014-10-29" version="1">MELLLVLALIPFLVDVFQDPIFSTLAVIGTFGIGLFQGMILGRAILVRFPRLQNHLKTVSITLFVLFLANAILSVPRFASPEKIELSNLSAGNPAEFASVLFLIFGMNTGFLTVLAISVTVMTFVILKFTNLNGIVKLFVFFFSSLLLVFTGISRFTDLTPSTFEVLLYFLYQLGIXXGLQLESWVELYEKSNLKNWTWNNFKRLNQIICDVDLTSNSNRSGNKAGSPCVGLSAPFIKNLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTP0</accession>
    <name>A0A087RTP0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative BCR protein</fullName>
            <ecNumber evidence="6">6.3.2.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01396</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.12" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000040">
        <property type="protein sequence ID" value="KFM16844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16844">
        <property type="protein sequence ID" value="KFM16844"/>
        <property type="gene ID" value="AAA799P11_01396"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1325"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008841">
        <property type="term" value="F:dihydrofolate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003844">
        <property type="entry name" value="UPF0060"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36116">
        <property type="entry name" value="PTHR36116"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02694">
        <property type="entry name" value="UPF0060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM16844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="94" mass="10706" checksum="8801CAC319363108" modified="2014-10-29" version="1" fragment="single">VLEIGGGYLVWKWLRDHKGKIFGLVGGLILFSYGIIPTFQPADFGRVYATYGGIFIIVSVMWGYWIDKKRPDRFEIIGSVIVLIGVAVMFYFPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUK0</accession>
    <name>A0A087RUK0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative BCR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01380</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17154">
        <property type="protein sequence ID" value="KFM17154"/>
        <property type="gene ID" value="AAA799P11_01380"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003844">
        <property type="entry name" value="UPF0060"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02694">
        <property type="entry name" value="UPF0060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM17154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="166" mass="18586" checksum="51135D8342DED4DC" modified="2014-10-29" version="1" fragment="single">MFFLAGLCEIGGGYLVWLWLREDFSFIVGAAGGFVLFLYGKFIIVDLSSGTSDDITSFLGSIILHMIYVEAKKRVDNTQQLAVPFYIYIDEAHLFSPFALREILNTMRKFNVKVTLATQTINAYPKRVADEIPALARTILCFKCDTGTAHMFRNLLPLGADEMVGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ5</accession>
    <name>A0A087RVJ5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">7-cyano-7-deazaguanine synthase protein</fullName>
            <ecNumber evidence="1">6.3.4.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">queC</name>
        <name evidence="1" type="ORF">AAA799P11_01331</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.20" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17499">
        <property type="protein sequence ID" value="KFM17499"/>
        <property type="gene ID" value="AAA799P11_01331"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1271"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01995">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018317">
        <property type="entry name" value="QueC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42914">
        <property type="entry name" value="PTHR42914"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06508">
        <property type="entry name" value="QueC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006293">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="224" mass="24954" checksum="3F7134897C77FEFC" modified="2014-10-29" version="1">MKKAVVVFSGGVDSVCAVSFLKSKYELYGITFSYGQKANMEISAAKSFAKKLGLKQHKIIDIGFMKELYGDSNVLTSSKRKIPSKFEYSIVVPIRNAVFLSVASAWAYTLNASLVVYGAHTGDKHYPDCRPAFAKKLESAFNQGEIDGINSKLRKKIEIWSPYREGLSKSDLLKKGKTVLGDSIFKTWSCYSNKKLHCGVCESCNNRKIAFEKAGILDKTKYLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL3</accession>
    <name>A0A087RVL3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">TATA-box-binding protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Box A-binding protein</fullName>
            <shortName evidence="5">BAP</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">TATA sequence-binding protein</fullName>
            <shortName evidence="5">TBP</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">TATA-box factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tbp</name>
        <name evidence="7" type="ORF">AAA799P11_01313</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the TBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17517">
        <property type="protein sequence ID" value="KFM17517"/>
        <property type="gene ID" value="AAA799P11_01313"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1252"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00408">
        <property type="entry name" value="TATA_bind_prot_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000814">
        <property type="entry name" value="TBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030491">
        <property type="entry name" value="TBP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012295">
        <property type="entry name" value="TBP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10126">
        <property type="entry name" value="PTHR10126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00352">
        <property type="entry name" value="TBP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00686">
        <property type="entry name" value="TIFACTORIID"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00351">
        <property type="entry name" value="TFIID"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="repeat" description="1" evidence="5">
        <location>
            <begin position="10"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="repeat" description="2" evidence="5">
        <location>
            <begin position="101"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="187" mass="20898" checksum="93859EA17246E08E" modified="2014-10-29" version="1">MPQTKPIVSVENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLKSPRTATLIFRTGKMVCTGAKSEEMAIKAVNTVVQKLRKGKIKIKKDAVITVQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSVLEEKNLMIYDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL5</accession>
    <name>A0A087RVL5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17519">
        <property type="protein sequence ID" value="KFM17519"/>
        <property type="gene ID" value="AAA799P11_01315"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1254"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="194" mass="22761" checksum="F728D0184F4F52EB" modified="2014-10-29" version="1">MANDTRDLIDNLYEKTEPAQNDYKPQIIRKSQKAKYQIFDESEFTRGREVLGDLIVHGMRASGGTDIDWLIEHKGGFVILEFKGFHNDKINIAKGQMIAYEKLHEKLNQSAKCYLYVVGCDDIDFSNPDATVWVFEMSQWKSNAIPKNTSDIYGDDSNRQNKYIVYREYMEEISVEKLRDIIDSHWKEFERIML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT4</accession>
    <name>A0A087RWT4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Chaperone protein DnaK</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">HSP70</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Heat shock 70 kDa protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Heat shock protein 70</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">dnaK</name>
        <name evidence="7" type="ORF">AAA799P11_01291</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Acts as a chaperone.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the heat shock protein 70 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17938">
        <property type="protein sequence ID" value="KFM17938"/>
        <property type="gene ID" value="AAA799P11_01291"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1231"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00332">
        <property type="entry name" value="DnaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012725">
        <property type="entry name" value="Chaperone_DnaK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="PTHR19375"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="SSF100920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="SSF100934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02350">
        <property type="entry name" value="prok_dnaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00297">
        <property type="entry name" value="HSP70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00329">
        <property type="entry name" value="HSP70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 3 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="580"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="483"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="593"/>
            <end position="612"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="612" mass="66027" checksum="A689C771824957AC" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT5</accession>
    <name>A0A087RWT5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein GrpE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">grpE</name>
        <name evidence="6" type="ORF">AAA799P11_01292</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the GrpE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17939">
        <property type="protein sequence ID" value="KFM17939"/>
        <property type="gene ID" value="AAA799P11_01292"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1232"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000774">
        <property type="term" value="F:adenyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00446">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.22.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01151">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000740">
        <property type="entry name" value="GrpE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013805">
        <property type="entry name" value="GrpE_coiled_coil"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009012">
        <property type="entry name" value="GrpE_head"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237">
        <property type="entry name" value="PTHR21237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01025">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00773">
        <property type="entry name" value="GRPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51064">
        <property type="entry name" value="SSF51064"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58014">
        <property type="entry name" value="SSF58014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01071">
        <property type="entry name" value="GRPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM17939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="187" mass="21382" checksum="B84D42154FBF126A" modified="2014-10-29" version="1">MSNDNESDEIPVNVVSDNESDELIDESESSESIKENLSELLDAEKQKTLECEEKLKHILADFQNLSRKTQSDIENGVNAKVDEFLLDFLKIYDDFIRARDVFYENKINTEGLDSILKNMDSLLKKYDVAPINALGEIFDPNLHEAISVVTDPDLDDNTIIKEIRKGYISQKRVIRPTLVEISKKDDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT6</accession>
    <name>A0A087RWT6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01293</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17940">
        <property type="protein sequence ID" value="KFM17940"/>
        <property type="gene ID" value="AAA799P11_01293"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1233"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="379" mass="41890" checksum="044913F4113BA4B3" modified="2014-10-29" version="1">MGGTKVVVYGLSTEGYAIASQMAIKGADVYIIDESTPSAISLKAEIAKTYPNVSSLKEDEPLLAMEPIDVAISKAQYLFFTPRIRKTGQDIKTEIHSKFKDATASLKKKSSVVFTLPTGFGGNNENISLLEHVTGLEVGKDVSYFYYPLEGTDQQPKIIGSFNGKKDTTLSDLLTTGKKEKNFVAISSSEHFHAINVLSRFSSLCSVLEVCKYAQDEITKNDLSSDDFQETFLDDMVGGLLDLKSLGSSFEGANTLMYLINGSVKGIDGYIKRLIDEIRATLKKNDLKASRTKIAISWTLDQHSMRGDKIEMLQNLTSRLRDYIGDVEAYEDPNFDLFHSDKTTIVVACSKSDFTNIEKTKQDSDLIIVKANPLCETIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT8</accession>
    <name>A0A087RWT8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Lipid-A-disaccharide synthase protein</fullName>
            <ecNumber evidence="1">2.4.1.182</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">lpxB</name>
        <name evidence="1" type="ORF">AAA799P11_01295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.182" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17942">
        <property type="protein sequence ID" value="KFM17942"/>
        <property type="gene ID" value="AAA799P11_01295"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1235"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008915">
        <property type="term" value="F:lipid-A-disaccharide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007152">
        <property type="entry name" value="DUF354"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39662">
        <property type="entry name" value="PTHR39662"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04007">
        <property type="entry name" value="DUF354"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="160" mass="18331" checksum="C4D68B40E0CA7B73" modified="2014-10-29" version="1">MIRVEEEYASYVSKSSNIISIIKKIVKEFEKENIVILCRYPSQIKKIKNEISGKPKILSMSFDGKHLLKNSDVFIGSGGTMTAESSLLGTPTISYNAVPNIVEEYLVKKHLVKRETEPEKICDEIKKIFHSSKTQYVKKAKIEKLKMENPIEKLVKIIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW1</accession>
    <name>A0A087RWW1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01278</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17965">
        <property type="protein sequence ID" value="KFM17965"/>
        <property type="gene ID" value="AAA799P11_01278"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="5"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="91" mass="10297" checksum="E4D7D17B0F61B4DC" modified="2014-10-29" version="1">MIKNIVITLACIISIPVVIFFIPLVDEFETFNCITDPCESPKITIFESLQKQYSVIDSFEECVSAGNPVMESHPRQCRTTDGKHFVEKINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW8</accession>
    <name>A0A087RWW8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01285</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17972">
        <property type="protein sequence ID" value="KFM17972"/>
        <property type="gene ID" value="AAA799P11_01285"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1228"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034457">
        <property type="entry name" value="Organic_radical-activating"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352">
        <property type="entry name" value="PTHR30352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="86" mass="9420" checksum="EC934B73EB0FCE89" modified="2014-10-29" version="1">MTTILGKQAELYEKLPDDKVKCTACARYCEIGKGQIGLCGIRGNENGKLQLFAYGKVISGHVDPIEKKPLIHYYPGSRVYSIATTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWX0</accession>
    <name>A0A087RWX0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Radical SAM protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01287</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17974">
        <property type="protein sequence ID" value="KFM17974"/>
        <property type="gene ID" value="AAA799P11_01287"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1229"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034457">
        <property type="entry name" value="Organic_radical-activating"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30352">
        <property type="entry name" value="PTHR30352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="134" mass="15768" checksum="A456E74DD424688C" modified="2014-10-29" version="1">MIVPKVGDDLEHAKKLSNFILDEFGPEMPIHFLRFHPDYKMMEYPSTPVETLEKHYQIAKDVGLKYVYLGNVPGHKWEHTYCSECNNIVVNRYGFSIREWNLDKTNCCKFCGNKIPIEGKLQEGYKEDRFQFVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY5</accession>
    <name>A0A087RWY5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01254</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17989">
        <property type="protein sequence ID" value="KFM17989"/>
        <property type="gene ID" value="AAA799P11_01254"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="277" mass="33620" checksum="505F294848BC83FA" modified="2014-10-29" version="1">MIKSLSKDDSAILEKYVKFIPYLGERWSTYNQILKPYQFLLHRLLKRALDEIDISIQYRLHTKDNKFRPRIEEITKLVFEDRGLEIKQSELYYPAKEEERGIAYNTFLKKKEKLWKKFFSKESIKISNRMVNKLVFLFYFNAIKLEHDDRFGFHIFNDFHVNEFEEIKMEIPKEHEKIDDFESIKNEFKTKWDNYDKFWGTKRLKFASVIVKDIFEKDDLLYLFGDGFDPLRTAFYEKPTTFVEMDKAFMKKMIEKGIEYGIIKFKKPKDSETESEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX02</accession>
    <name>A0A087RX02_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-23-diacylglucosamine hydrolase protein</fullName>
            <ecNumber evidence="2">3.6.1.54</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01238</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.54" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18006">
        <property type="protein sequence ID" value="KFM18006"/>
        <property type="gene ID" value="AAA799P11_01238"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1194"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024173">
        <property type="entry name" value="Pesterase_MJ0037"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000887">
        <property type="entry name" value="Pesterase_MJ0037"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="1">
        <location>
            <begin position="22"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="249" mass="28000" checksum="227F69816BBF9440" modified="2014-10-29" version="1">MLQTRIIPSKPALILEGEKKHLVVTDLHIGFESSMASNEIFIGKNSTVNETIQELSQMADTEKPDSVILLGDIKSSVKSISKSEWDEVPLFFEKMSEKCEVVLVPGNHDANISRLVPQNITMISSTGMVEENILLTHGHTMPSENFSHVDKIIMGHVHPVFFQEDSVINGQRVWVSMKIEKEKIFPNKSGELEITIIPSFNKYFYATHRKKYKKSISPIIDRIKSVAKARIVTLDGTIIGNESIIDQVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX07</accession>
    <name>A0A087RX07_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-threonine 3-dehydrogenase protein</fullName>
            <ecNumber evidence="4">1.1.1.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tdh</name>
        <name evidence="4" type="ORF">AAA799P11_01243</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.14" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18011">
        <property type="protein sequence ID" value="KFM18011"/>
        <property type="gene ID" value="AAA799P11_01243"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1199"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003939">
        <property type="term" value="F:L-iditol 2-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="3">
        <location>
            <begin position="7"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="342" mass="37625" checksum="2569A069939394BA" modified="2014-10-29" version="1">MKTASVKEPSVISVSETENPSLESGDILVQMHACGICGSDLEKVFGQYGQPSMRLGHEPAGVVLDVGSDVTEFKKGDRVFTHHHVPCYDCHFCNHGNETMCKKYYETNLSPCGLSEQYVVPAWNVSHGGVLKISDSLSFEEAAMIEPLACCVRAWTKYHYQEGDSAAIFGVGPTGMMHVMLAQAKKLSKIFCFDVNDFRLDFAKKFNITESINSADETRKQKILDHTNNRGVDVAIVATSSLKALDDAIDMVRKGGAVMMFGVPSKGAKMDLDMSKIYSKEITLVTSYAASDNDTKEALNLIESSQIDVKQLITHTYPIDDTQKAFDHARSGENAMKIIITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX70</accession>
    <name>A0A087RX70_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01231</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000023">
        <property type="protein sequence ID" value="KFM18074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18074">
        <property type="protein sequence ID" value="KFM18074"/>
        <property type="gene ID" value="AAA799P11_01231"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1184"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="210" mass="21654" checksum="C80196EADA5F1B65" modified="2014-10-29" version="1">MKTTSAILLAGIMVAGVSGMILAFDETPLTSLAIAESATGISQPVQTVGHITFTVFDENGDIKQYRQTDNTVLNEGEDCLATLTFDSAIDGAGNCDHADVEFDGIWIGNQNAGAITESATNLTNPIDVANATNVNLTAASGATGSQTSLDATFSFTTALNIDEAGLANSVSNGTLGNVDAHADFLAIQTFTDIPVTSSDTLNVDWTITLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX71</accession>
    <name>A0A087RX71_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative cobalt-precorrin-4 C-methyltransferase protein</fullName>
            <ecNumber evidence="3">2.1.1.133</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cbiF</name>
        <name evidence="3" type="ORF">AAA799P11_01232</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.133" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000023">
        <property type="protein sequence ID" value="KFM18075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18075">
        <property type="protein sequence ID" value="KFM18075"/>
        <property type="gene ID" value="AAA799P11_01232"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1185"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046026">
        <property type="term" value="F:precorrin-4 C11-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="TP_methylase" evidence="2">
        <location>
            <begin position="8"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="12041" checksum="3AE1027A2810471B" modified="2014-10-29" version="1">MYLVCVSSIYGAIKEQIDNLAKKGIKSTVVPGVTAFLASAAALGTQLTLPGVTQTIIVTRAESRTTKKLSEMMKLDRCSKDFVFRISAIMYAVSYIKLIGNDVKHKQNLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM2</accession>
    <name>A0A087RXM2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpl23</name>
        <name evidence="5" type="ORF">AAA799P11_01143</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit. Contacts protein L29.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18226">
        <property type="protein sequence ID" value="KFM18226"/>
        <property type="gene ID" value="AAA799P11_01143"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1104"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01369_A">
        <property type="entry name" value="Ribosomal_L23_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_L23/L15e_core_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013025">
        <property type="entry name" value="Ribosomal_L25/23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11620">
        <property type="entry name" value="PTHR11620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00276">
        <property type="entry name" value="Ribosomal_L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="SSF54189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="88" mass="9905" checksum="8EB511A7FBB7B653" modified="2014-10-29" version="1">MNADQASKIIIKPYITEKTFAMVENESKICFIVDRSASKPEIADAVNTLYKEKVTNVNTARTIYGKKAFVQFENTEKARDLATKIGML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN6</accession>
    <name>A0A087RXN6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01162</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18240">
        <property type="protein sequence ID" value="KFM18240"/>
        <property type="gene ID" value="AAA799P11_01162"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1119"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="82" mass="9529" checksum="B3D500EA6AD3ACAF" modified="2014-10-29" version="1">MVRTRRANRYCVDCGARLVYYPRLSNPKAPNEHRVLVYACPDCTDDFEKPKMFSIKRNQVEDPLETVEIEITQLQKKAVAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP9</accession>
    <name>A0A087RXP9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphoribosylaminoimidazole-succinocarboxamide synthase</fullName>
            <ecNumber evidence="7">6.3.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">SAICAR synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">purC</name>
        <name evidence="9" type="ORF">AAA799P11_01175</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + ATP + L-aspartate = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:22628"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58443"/>
            <dbReference type="ChEBI" id="CHEBI:77657"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 7">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the SAICAR synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.6" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18253">
        <property type="protein sequence ID" value="KFM18253"/>
        <property type="gene ID" value="AAA799P11_01175"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1132"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004639">
        <property type="term" value="F:phosphoribosylaminoimidazolesuccinocarboxamide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00137">
        <property type="entry name" value="SAICAR_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028923">
        <property type="entry name" value="SAICAR_synt/ADE2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001636">
        <property type="entry name" value="SAICAR_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018236">
        <property type="entry name" value="SAICAR_synthetase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01259">
        <property type="entry name" value="SAICAR_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00081">
        <property type="entry name" value="purC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01057">
        <property type="entry name" value="SAICAR_SYNTHETASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01058">
        <property type="entry name" value="SAICAR_SYNTHETASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAICAR_synt" evidence="8">
        <location>
            <begin position="4"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="274" mass="31657" checksum="50DF92E66F7E7B97" modified="2014-10-29" version="1">MKFLTSGKVKDLYDVDENTLLFKFSDRVSAYDVKFKQDIPRKGEILCKFAEFWFNELDVPNHFIKRESETEILVKKMKMLPIECVVRGYFYGSLVSRWKKGEVQVPEGTDTTLAAKLPEPIFDPTTKSEHDIPINKTKAIEMNLVSEEQYIWLEKTSIEIYKKMAKIADDVGFILADLKLEFGILDGQITLGDSIGPDEYRLWPKDSFEVGKIQEAYDKQLLRDWLTANGYQKQFDDARDAGKEPIAPDIPDEIIQKMTQRYVIAYEKLTGNTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR1</accession>
    <name>A0A087RXR1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sec-independent protein translocase protein TatA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_01187</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18265">
        <property type="protein sequence ID" value="KFM18265"/>
        <property type="gene ID" value="AAA799P11_01187"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1144"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003369">
        <property type="entry name" value="TatA/B/E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02416">
        <property type="entry name" value="TatA_B_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="7575" checksum="101B2108C4C179BE" modified="2014-10-29" version="1">MFGVNLANFIAGQEWIFIVIIAVVLIFGAKKIPELAKTFGKAKGEFEKGKIEGEKELKDFKDKEAKSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR4</accession>
    <name>A0A087RXR4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18268">
        <property type="protein sequence ID" value="KFM18268"/>
        <property type="gene ID" value="AAA799P11_01190"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1147"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="47" mass="5460" checksum="2EE16131EEE1582D" modified="2014-10-29" version="1">MLYNFELQMAGVILLTAMAIGGITLWLKRRKERKEFEASFKNDEPSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ1</accession>
    <name>A0A087RXZ1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulatory protein AsnC</fullName>
            <ecNumber evidence="2">2.4.2.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.18" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18345">
        <property type="protein sequence ID" value="KFM18345"/>
        <property type="gene ID" value="AAA799P11_01120"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1082"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004048">
        <property type="term" value="F:anthranilate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="6"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="79" mass="8699" checksum="D6FCA7F987F8C184" modified="2014-10-29" version="1">MATAYVLVNCELGSEEAVISELKSIEGVVEVRGTFGAYDILAKVESSQVEALRETITWKIRKIPKIRSTLTLMGIQGQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY32</accession>
    <name>A0A087RY32_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01099</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18386">
        <property type="protein sequence ID" value="KFM18386"/>
        <property type="gene ID" value="AAA799P11_01099"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1060"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="32" mass="3607" checksum="C729853572395286" modified="2014-10-29" version="1">MSRIKQIAIWIGIIGGGIGFFFFSIEAAEFMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF5</accession>
    <name>A0A087RYF5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Aspartate-semialdehyde dehydrogenase</fullName>
            <ecNumber evidence="7">1.2.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">asd</name>
        <name evidence="9" type="ORF">AAA799P11_01079</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-aspartate 4-semialdehyde + NADP(+) + phosphate = 4-phospho-L-aspartate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:24284"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="1.2.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 2/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the aspartate-semialdehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.11" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18509">
        <property type="protein sequence ID" value="KFM18509"/>
        <property type="gene ID" value="AAA799P11_01079"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1041"/>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00016"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00463"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00464"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004073">
        <property type="term" value="F:aspartate-semialdehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000319">
        <property type="entry name" value="Asp-semialdehyde_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005676">
        <property type="entry name" value="Asp_semi-ald_DH_pep-lack"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000534">
        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012280">
        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00978">
        <property type="entry name" value="asd_EA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01103">
        <property type="entry name" value="ASD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="8">
        <location>
            <begin position="5"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="358" mass="39630" checksum="584D7BE33F02EEC7" modified="2014-10-29" version="1">MEKKRVAIIGVTGSVGQEFVQSLNNHPWFEVTQIAASERSAGKKYLDAIRNEGGIIMWDVGGEIPEYIKEMTVKRIDELDTSQLDLIFSAVESQAARDIETKMAAELPVVSTSSAYRYEEDVPILIPGVNDEQAELIETQKKNRNWKGFVAPLPNCTTTGLAITLKPLLEKYGAKKVMMTSMQAISGGGKSGVSAMGITDNILPYIPKEEGKVRLETRKILGKLKDGKIEDADIRVSCTCTRVPVIDGHTESVFVETSEDIDPAKAKDLYNGYNKDISVQGLPSAPKEYYAFHEDPTRPQPRMEREVGDGMTTTIGRVEKEELFDKGLKYMLFSHNKKMGSAKGAVLLAEMLYKKGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYG1</accession>
    <name>A0A087RYG1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF5679 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18515">
        <property type="protein sequence ID" value="KFM18515"/>
        <property type="gene ID" value="AAA799P11_01085"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1047"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044044">
        <property type="entry name" value="DUF5679"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18930">
        <property type="entry name" value="DUF5679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5679" evidence="2">
        <location>
            <begin position="326"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="111"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="163"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="185"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="370" mass="41793" checksum="59B77345F5BAC4D2" modified="2014-10-29" version="1">MDKWADYLISEVSYDAQHLISVAIRHQDTEKGITKGTPVDRLTISSDIKNGISYITIYSGKNSWKKGYKIQTFSIGGNPFLRIDGNKVELDSLGDLPAVSNLKLEELDLSPEPVTEEPAPEPTPPSPKGSLPKESAEELPQELDLAPEPVTEEPAPEPEEEEATPEQLARLEQLEKQIQELESRPEPEPEEEEATPEQFEQLEELQKQIDELETKLVAKPVPTVQSEPEVEPVIEEYTEFNDLEDQIDELEDELILKLHPSSDEPTQEQISKVEELEKEIEKLESADIEHEIIQTLQKQNKKLNDIEKKLGKSSNETSESPSVEAYCVKCRTKRKIKNPEETTMKNGRPAIKGTCSTCNCKVFRIGKLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYG3</accession>
    <name>A0A087RYG3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01087</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18517">
        <property type="protein sequence ID" value="KFM18517"/>
        <property type="gene ID" value="AAA799P11_01087"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1049"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="227" mass="26961" checksum="8DB94EB6382511BF" modified="2014-10-29" version="1">MNIEKAIDDCEIYLKQIKQHEPDPFYVNHFFSEFIDSLNNVLDGIFEEANRDFGLFITEKISYEKFLEKAKSKNDLKAIKFSEWYINKFEQEHKSRLPKAIKKICELKNKHNKLPEIKIMIRAQDRYENDINQQIMVSLSNEKLRSKDELEIEINRQLPVFLEVINNKRSKNNEPSVNENQITTSAFIDIEDISEIEIAYASEIYIPVLIRLVEESRKKIKELTSWN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYM1</accession>
    <name>A0A087RYM1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01062</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18575">
        <property type="protein sequence ID" value="KFM18575"/>
        <property type="gene ID" value="AAA799P11_01062"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1024"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="43" mass="4874" checksum="7865F63C52A8C79C" modified="2014-10-29" version="1">MAKCCICKLVEGTLKIKDGNPKYKGKPICKECQGYRKLLLETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ29</accession>
    <name>A0A087RZ29_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-containing ferredoxin-2 protein</fullName>
            <ecNumber evidence="2">1.2.7.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01023</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.7.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18733">
        <property type="protein sequence ID" value="KFM18733"/>
        <property type="gene ID" value="AAA799P11_01023"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.989"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13187">
        <property type="entry name" value="Fer4_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="63"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="123"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="178" mass="19709" checksum="00B3A04282F8DF19" modified="2014-10-29" version="1">MPIDEKFVENLEVTGKTLHSDGENKHFIWGSGRTDGEAFSNDDVKAAYEARGEEQVPLGIHGTTVAVDWDSCVAAGSCMSVCPVQTFQWYRTEKDIPAKDVNGATFDGTGLTEQDERLDYTDKSMPIREHDCTQCMACQEACPTHAILIEPSYQEYHEKADGSYVKMESGSVNPHAHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ36</accession>
    <name>A0A087RZ36_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase ral function prediction only protein</fullName>
            <ecNumber evidence="2">2.3.1.158</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.158" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18740">
        <property type="protein sequence ID" value="KFM18740"/>
        <property type="gene ID" value="AAA799P11_01035"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.996"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046027">
        <property type="term" value="F:phospholipid:diacylglycerol acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="158" mass="17082" checksum="014B9566998513A3" modified="2014-10-29" version="1">MVTNFISDKAKIGQNVSIWHFTYVGDNVEVGDNVKIGSLVHIDYDVKIGDNTKIEGSAYIPPLSRIGKNAFIGPAAVLTNDPYPMCDKMTGVTIEDGAIIGARAVIKAGVTVGKNSVVAMGSVVTRDVPENVVVMGSPATIRKTREEYDKKQKEWLEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ37</accession>
    <name>A0A087RZ37_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Trm112p-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01036</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18741">
        <property type="protein sequence ID" value="KFM18741"/>
        <property type="gene ID" value="AAA799P11_01036"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.997"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005651">
        <property type="entry name" value="Trm112-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03966">
        <property type="entry name" value="Trm112p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="89" mass="10510" checksum="340CCCB48E1DC0B4" modified="2014-10-29" version="1">MNKTMIDILACPIDKNHPLELFEIKEKENVVSEGALFCPKCSRFYPIIEEIPIMLPDELRDKKQEIQFLENFKDKLPEKIITKANPWHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ79</accession>
    <name>A0A087RZ79_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-N-acetylglucosamine 2-epimerase protein</fullName>
            <ecNumber evidence="2">5.1.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">wecB</name>
        <name evidence="2" type="ORF">AAA799P11_00992</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.14" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18783">
        <property type="protein sequence ID" value="KFM18783"/>
        <property type="gene ID" value="AAA799P11_00992"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.958"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008761">
        <property type="term" value="F:UDP-N-acetylglucosamine 2-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003331">
        <property type="entry name" value="UDP_GlcNAc_Epimerase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029767">
        <property type="entry name" value="WecB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43174">
        <property type="entry name" value="PTHR43174"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02350">
        <property type="entry name" value="Epimerase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00236">
        <property type="entry name" value="wecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase_2" evidence="1">
        <location>
            <begin position="26"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="354" mass="39759" checksum="84759991395B814C" modified="2014-10-29" version="1">MKTAIVLGTRPEIIKLAPLIKKLKNSSLIFTGQHYDYEMSLQFIKQLGLPTPNYSLKISKSNPSQQMGEIIIKLSKILSKIKPETVIVQGDTNTVLAASISSLKSKIPVSHVESGLRSFDWRMPEEHNRIATDHISELLFAPTKNSQKNLKNEKVHGKIFVTGNTVIDSINMYSKISATKSSLDVFYDEYVLMTLHRAENVDNKTTLSSIINAIVKSDADFIFPIHPRTIKRLKEFNLYKKLKNSKNVSLLNSVGYFEILELMKNCSFIISDSGGIQEEATAPSIRKKVLVLRKTTDRPESVKDGFSTVIGTQESKILKNIKKTMDDPVIKSRNNPFGKGNSSDKIIKILKTNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ89</accession>
    <name>A0A087RZ89_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Demethylmenaquinone methyltransferase protein</fullName>
            <ecNumber evidence="2">2.1.1.197</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01002</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.197" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18793">
        <property type="protein sequence ID" value="KFM18793"/>
        <property type="gene ID" value="AAA799P11_01002"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102130">
        <property type="term" value="F:malonyl-CoA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="52"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="197" mass="23066" checksum="DAA99432105FDF44" modified="2014-10-29" version="1">MSKHWFIAHLIKKYTNGKNIGLDVGVGKDNWSDFKKCDFIDVDINKQSKSDIIIDLEQHLPFKDSFFDVVISINVLNYVKKSRQVMKEINRVLKMDGIFVCIVDNPNSNNEKDDTWSQTYLDRILSLTGFKTILKNNLKDFLYAKWFNKTSVYAFAVVKKIENYETPLKKDVVTNKKTKQEIKWAKSYNIKTTHPED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ94</accession>
    <name>A0A087RZ94_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative asparagine synthetase glutamine-hydrolyzing protein</fullName>
            <ecNumber evidence="2">6.3.5.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">asnB</name>
        <name evidence="2" type="ORF">AAA799P11_01007</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.4" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18798">
        <property type="protein sequence ID" value="KFM18798"/>
        <property type="gene ID" value="AAA799P11_01007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004066">
        <property type="term" value="F:asparagine synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006529">
        <property type="term" value="P:asparagine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01991">
        <property type="entry name" value="Asn_Synthase_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001962">
        <property type="entry name" value="Asn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00733">
        <property type="entry name" value="Asn_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Asparagine synthetase" evidence="1">
        <location>
            <begin position="47"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="403" mass="46955" checksum="12090FCA2F3F5482" modified="2014-10-29" version="1">MLLKINKTQIQNYLTIRYDPSISNPNLASWVDFKPQSSDPSGKISEKLLVNSIKNSIPDTQTPISISLSSGIDSSICLALLRKCFPKRKIFAICGVFEDGFDESIEAKKIADTFSAEFKILQMNSIFTNMPEIISITKRPRWNTYNHLISKEARKNTNMLITGDGADELFGGYVFRYKKFLQLLKSKDNWMEKTKKYLECHNRDWVPDQNKMFDKSIRFNWNKIYNIFKTYFQNKLDPITQVMLADFNGKLLFDFMPTGKSISNHYKIKNIPIFLDDSVMSFAQKLPLSQKFDEKNTKGKLVLRMISKRLGIKHIDEKKGFSPSLLFDWKKNGKSICQSFLLDKNSNIYAKNLINFDWVLMAFDKVEYDGDIRYLNRLISILALEIWIRLFITHEIKNSKKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG7</accession>
    <name>A0A087RZG7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1722 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00902</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18871">
        <property type="protein sequence ID" value="KFM18871"/>
        <property type="gene ID" value="AAA799P11_00902"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.864"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013560">
        <property type="entry name" value="DUF1722"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08349">
        <property type="entry name" value="DUF1722"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1722" evidence="1">
        <location>
            <begin position="45"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="175" mass="20532" checksum="CB0004E466B537F3" modified="2014-10-29" version="1">MSEKQEMASTPRLSEQDIKEYILERFEDVKQGKIKNLVSFQAMNKYMIMAHNQDELKILGNIVASYKKISLLDTMSEYEKHLKSALEKPPTIKSHSNVIMHIFGYFSKNFSQPEKEQFFKLLNDFKKEEITIGKILSEINPIIYRFNNTYLASQTYFLLYSDPQPGNLFQILSQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZJ0</accession>
    <name>A0A087RZJ0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18894">
        <property type="protein sequence ID" value="KFM18894"/>
        <property type="gene ID" value="AAA799P11_00925"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.888"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="142" mass="16009" checksum="421DCC339DB76568" modified="2014-10-29" version="1">MSKNEQTQSNPKDLFSVYQQNVDKFFNGIRTSVPQYHQAITNVQQEFIQAYENIADSTLTLQKEFAKKAGIAANIPEATIKVMQDTTEEVVKATSIQNQVTLATIDATQQNIKTFNDNAKSFAELNRNILQSWISAFTTKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZJ3</accession>
    <name>A0A087RZJ3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein</fullName>
            <ecNumber evidence="2">3.1.1.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00928</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.61" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18897">
        <property type="protein sequence ID" value="KFM18897"/>
        <property type="gene ID" value="AAA799P11_00928"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.891"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008984">
        <property type="term" value="F:protein-glutamate methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="8"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="143" mass="15709" checksum="CBF51E01F10DB998" modified="2014-10-29" version="1">MIKKKILKILVPLDGSKNSQRGLETAITLARQCGAIITGVFSIHAPPHSEFRGVGSVEKSLNREVKKIMEESKVLAAKNGIVFKEKIMRGDIGYNIVKLAQGKEKFDMIVIGSRGRSSTKELFFGSVSNYVIHTAKIPVLVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL8</accession>
    <name>A0A087RZL8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0284 protein AAA799P11_00863</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00863</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0284 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18922">
        <property type="protein sequence ID" value="KFM18922"/>
        <property type="gene ID" value="AAA799P11_00863"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.829"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008939">
        <property type="term" value="F:nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02439">
        <property type="entry name" value="DMB-PRT_CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01086">
        <property type="entry name" value="UPF0284"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003200">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002805">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036087">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38811">
        <property type="entry name" value="PTHR38811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02277">
        <property type="entry name" value="DBI_PRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52733">
        <property type="entry name" value="SSF52733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00303">
        <property type="entry name" value="TIGR00303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="352" mass="37336" checksum="0253795CA67943AA" modified="2014-10-29" version="1">MEDFELYGNIDLAHNFIDSVKSGKFLFSFVISYTETSEIPGITFAGADKDSVQFTPPADAEYLHYGYCKTIDKIPMTPDGKPTPGVLTKTALESASIPHLTINAGSKIAPQLPFIESGLPFGKNISIQDAMTDTIVSHAVEYGQILGRSLASLTDCLIIGECIPGGTTTALALLKALDYDAKVSSSIPNNPVELKNQIVTSALDRIDSEHPYSIVAKIGDPMIPFVAGMLSSASSVSKVMLAGGTQMAAVLAFASKIGFNGENTAIGTTSYITNDKTANFKELVNDIADIPVISVDPGMKNSKFSGLKAFSEGFAKEGVGAGGSIISSMLKTGSNSENFLNLVEKEYQRLFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR9</accession>
    <name>A0A087RZR9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Secreted periplasmic Zn-dependent protease protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18973">
        <property type="protein sequence ID" value="KFM18973"/>
        <property type="gene ID" value="AAA799P11_00825"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="13850" checksum="104FE50F6F3FA68D" modified="2014-10-29" version="1">MRTVVFGIFLVSLIIQSFANTVFSETQENHLTLSSHEITKTEYSTEVKKLTVTGYISNYERGEIVHLLNVFPSGEITKLNTTGTDDGNFFTIIHINKSFDAGEYTLILEYDGKQIASTTYVIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS1</accession>
    <name>A0A087RZS1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00827</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18975">
        <property type="protein sequence ID" value="KFM18975"/>
        <property type="gene ID" value="AAA799P11_00827"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="284" mass="32254" checksum="18B5F8EF6A08A13A" modified="2014-10-29" version="1">MAVLLVNPAWAAEDFMLTVSSLSEYKEGEHSVISGKTMTLDERPVADVQIHVYFPSGIIKTVTNSTGQFLVTSPGILEIGEYDTTVSAKKDNKYTNAEIAYRVVEYKAKNIQTLEPEIDPPKTTDGKVELDPFSKMIQELEKQKTQEVKRETDIKEQQEIGEKRRLAQLDLQNDLKESEKQNEVNSPRNVFYRFIQEIDSSVRGIFWQQFLFTEKITQQAQEAKEKALLDGKSSLEATKIFQDEAAVTQKEVMDVNKNLSIKYGNATSGVQNMFDENGKLPRED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU4</accession>
    <name>A0A087RZU4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc finger C2H2 type domain signature protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18998">
        <property type="protein sequence ID" value="KFM18998"/>
        <property type="gene ID" value="AAA799P11_00850"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.817"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="65" mass="7534" checksum="FCBE34F115BE97F7" modified="2014-10-29" version="1">MDKPSRNNVSKVYCEKCDLVFESRERFEKHLDSHSSGVQCEVCPIDTAIAKFTNLFKRKSSHNLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0K9</accession>
    <name>A0A087S0K9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cobalt-precorrin-5B C(1)-methyltransferase</fullName>
            <ecNumber evidence="5">2.1.1.195</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Cobalt-precorrin-6A synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">cbiD</name>
        <name evidence="6" type="ORF">AAA799P11_00781</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Co-precorrin-5B + S-adenosyl-L-methionine = Co-precorrin-6A + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:26285"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:60063"/>
            <dbReference type="ChEBI" id="CHEBI:60064"/>
            <dbReference type="EC" id="2.1.1.195"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Cofactor biosynthesis; adenosylcobalamin biosynthesis; cob(II)yrinate a,c-diamide from sirohydrochlorin (anaerobic route): step 6/10.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the CbiD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.195" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19263">
        <property type="protein sequence ID" value="KFM19263"/>
        <property type="gene ID" value="AAA799P11_00781"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.752"/>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00227"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043780">
        <property type="term" value="F:cobalt-precorrin-5B C1-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046140">
        <property type="term" value="P:corrin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00787">
        <property type="entry name" value="CbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002748">
        <property type="entry name" value="CbiD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036074">
        <property type="entry name" value="CbiD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35863">
        <property type="entry name" value="PTHR35863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01888">
        <property type="entry name" value="CbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026782">
        <property type="entry name" value="CbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111342">
        <property type="entry name" value="SSF111342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00312">
        <property type="entry name" value="cbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="361" mass="39242" checksum="5BB351B416C70B89" modified="2014-10-29" version="1">MAEEKKLRTGYTTGSSATAAAKAALLSIIKQQKVNEIEITLPKKTIIKIPVNSCQFEKNKGKCSVIKDGGDDPDVTHGAEIIAELTFNENKNQIEIDGGEGVGIVTKPGLGLEINKPAINPVPKKMITENLQEIGKDILKEKGIRVVISVPKGKELGPKTDNPRLGIKDGISILGTSGIVIPFSTASYAASIRQNLDVSIAMGNDTVVLTTGGRSEDFAKKIVDLPEHCFVQMGDFSGYTIQQCGKKNIKKAYVVGFIGKLAKMASGVKQTHVKGSKVDMNFLAELAKQVNADEKIIESIKKANTARHVSEIIQENNVEGFFELICTEVYRHMRKHSEEKVPIDVILFDFEGNVLAREPKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S128</accession>
    <name>A0A087S128_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Zinc finger C2H2 type domain signature protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00756</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19432">
        <property type="protein sequence ID" value="KFM19432"/>
        <property type="gene ID" value="AAA799P11_00756"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.729"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="57" mass="6712" checksum="8C1243357BB9419C" modified="2014-10-29" version="1">MVLPLVDEHKPKCYLCHKGFENLEDLREHQNSKHSDFFESHEKEMNKEPAPGDVTVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S140</accession>
    <name>A0A087S140_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00768</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19444">
        <property type="protein sequence ID" value="KFM19444"/>
        <property type="gene ID" value="AAA799P11_00768"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.741"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="9158" checksum="17A0EC9A5FBC07B5" modified="2014-10-29" version="1">MGLLYTKFYMDFDDSDWNQISNDPIIFETKKENVSLEIDDASHNFYKLHFKKGGKIRMFRVTGRFRLTWDDEDVLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B4</accession>
    <name>A0A087S1B4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rps10</name>
        <name evidence="6" type="ORF">AAA799P11_00719</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the binding of tRNA to the ribosomes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="A0A087S1B4"/>
    <dbReference type="EnsemblBacteria" id="KFM19518">
        <property type="protein sequence ID" value="KFM19518"/>
        <property type="gene ID" value="AAA799P11_00719"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.690"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00508">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001848">
        <property type="entry name" value="Ribosomal_S10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027486">
        <property type="entry name" value="Ribosomal_S10_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036838">
        <property type="entry name" value="Ribosomal_S10_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005729">
        <property type="entry name" value="Ribosomal_S10_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11700">
        <property type="entry name" value="PTHR11700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00338">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00971">
        <property type="entry name" value="RIBOSOMALS10"/>
    </dbReference>
    <dbReference type="SMART" id="SM01403">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54999">
        <property type="entry name" value="SSF54999"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01046">
        <property type="entry name" value="uS10_euk_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_S10" evidence="5">
        <location>
            <begin position="6"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11419" checksum="431FAA4B6655D1C7" modified="2014-10-29" version="1">MTQTARVKLTSTSLPKLDGVCGEIMGIGKKTGVKVKGPTPLPVKRLHVATRKSPCGNGTETYEKWEMKMHRRIININADDKAIRQLMRLKIPDDVYIELSLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C3</accession>
    <name>A0A087S1C3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00728</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19527">
        <property type="protein sequence ID" value="KFM19527"/>
        <property type="gene ID" value="AAA799P11_00728"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="156" mass="18462" checksum="A7220421E155C145" modified="2014-10-29" version="1">MKLEYASIRIIDYLDSDNLKKFEKELEQSDIFTVEKDNKWEETSISQGRRKTIASEKHPPELEFIESIQIDQIQYKNFSSAIMLVIEGTLSQEIFEKLMSQDINQNQTLLKQFQVKLWNYWKKNITSTYYVTKGHMVTNQFKSTSSNLVSIIMQNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C4</accession>
    <name>A0A087S1C4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00729</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19528">
        <property type="protein sequence ID" value="KFM19528"/>
        <property type="gene ID" value="AAA799P11_00729"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="240" mass="27304" checksum="48A96C9A9CAB12F6" modified="2014-10-29" version="1">MLSQLERLKDEFDVLKEQYKILGEELSEILNFSIAQTNIKLASESEKTQKSLKKQGKLSFISSIAIIGLTIVLLGITLQQFSIDNAEPDFLVNRGHINVIHANTFDQVEYLSPILLSTSTSHNFKYNVVLTEDSVEKYDFGNCFFKETPKVNYAEPLVFFLSSGVDERELDPKFRLSYETQMPKFSEKALERSVLHSIGEIEFKIIAQDAQGDNESIVIPAKADLSMRIPWNYNTTAICY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I3</accession>
    <name>A0A087S1I3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GMP synthase protein</fullName>
            <ecNumber evidence="2">6.3.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00576</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19587">
        <property type="protein sequence ID" value="KFM19587"/>
        <property type="gene ID" value="AAA799P11_00576"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.561"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="FeS_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="FeS_cluster_insertion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017870">
        <property type="entry name" value="FeS_cluster_insertion_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00049">
        <property type="entry name" value="TIGR00049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01152">
        <property type="entry name" value="HESB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-S_biosyn" evidence="1">
        <location>
            <begin position="10"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="116" mass="12687" checksum="879DDD9EE013C131" modified="2014-10-29" version="1">MATEQTQKMITVTAKAAEKIKEFMKEEAESPEYLRVYVQGGGCSGLSYGMGFEKAPEEDDLVMEENGVKLLVDSYSVDHLQGANVDYIESLMGSGFKINNPNVTKSCSCGHSFSTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1J0</accession>
    <name>A0A087S1J0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GMP synthase glutamine-hydrolyzing protein</fullName>
            <ecNumber evidence="2">6.3.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">guaA</name>
        <name evidence="2" type="ORF">AAA799P11_00583</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19594">
        <property type="protein sequence ID" value="KFM19594"/>
        <property type="gene ID" value="AAA799P11_00583"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.567"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01741">
        <property type="entry name" value="GATase1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044992">
        <property type="entry name" value="ChyE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42695">
        <property type="entry name" value="PTHR42695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GATase" evidence="1">
        <location>
            <begin position="29"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="227" mass="25688" checksum="5BDCDFFE33BA96FA" modified="2014-10-29" version="1">MSDVLLVQNTRIEGSGYLGELLKEDGFNITSVNAKHEKLPNKDFSLVVILGAPESANDDLPYLKEEQQLIKNSVEKNIPVLGICLGSQLIAKTFGSNVYSGPKKEIGFYNDLTISNDSGLFLGFKNPFTVFHWHGDTFDLPEGAVKLASSEHYQNQAFRYKSAVGLQFHLEVNEEMVNLWLDNTEEKLQNIPYIDPKKIRSDIDENISTVKSNMKNFYNNFKSEFQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M6</accession>
    <name>A0A087S1M6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MG2 domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00619</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19630">
        <property type="protein sequence ID" value="KFM19630"/>
        <property type="gene ID" value="AAA799P11_00619"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.605"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="719" mass="78154" checksum="41D64F98351E0CC6" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N4</accession>
    <name>A0A087S1N4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Type 2 DNA topoisomerase 6 subunit A</fullName>
            <ecNumber evidence="6">5.6.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Type II DNA topoisomerase VI subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">top6A</name>
        <name evidence="8" type="ORF">AAA799P11_00627</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Relaxes both positive and negative superturns and exhibits a strong decatenase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer. Heterotetramer of two Top6A and two Top6B chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the TOP6A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19638">
        <property type="protein sequence ID" value="KFM19638"/>
        <property type="gene ID" value="AAA799P11_00627"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.613"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006268">
        <property type="term" value="P:DNA unwinding involved in DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00223">
        <property type="entry name" value="TOPRIM_TopoIIB_SPO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00132">
        <property type="entry name" value="Top6A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002815">
        <property type="entry name" value="Spo11/TopoVI_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013049">
        <property type="entry name" value="Spo11/TopoVI_A_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036078">
        <property type="entry name" value="Spo11/TopoVI_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004085">
        <property type="entry name" value="TopoVI_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034136">
        <property type="entry name" value="TOPRIM_Topo6A/Spo11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10848">
        <property type="entry name" value="PTHR10848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04406">
        <property type="entry name" value="TP6A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01550">
        <property type="entry name" value="TOP6AFAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01552">
        <property type="entry name" value="TPISMRASE6A"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56726">
        <property type="entry name" value="SSF56726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="TP6A_N" evidence="7">
        <location>
            <begin position="82"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="256"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="370" mass="41959" checksum="1453229749E914EA" modified="2014-10-29" version="1">MKASEKKAKAISKKAKEKQKSILEALKKHGAKIYEDLENGQFPKFSIPSRSVSNIVYDKKLRQYILGNSTALRSAKNSAQLRSFTQLMWLAFFANRLTQEKKSSTLRDVYYSSQAFAIEFDDQSESDNIIVDLEAVTSRPREDFHIFPEERSSIFGDLNIEYTIPGYEGKKMNLSNHPDGYSIGPSLTTAELVDTSAEIVIAIEKGGLFTRFVEEQVDKKFKSIIINTGGQAPRSTRTLLKRLHDEMGLPVIILTDGDVYGEHIAMVIKSGSANAAHLRELTVPDAKWVGVWATDIEKYKLPTIPMTESDIKRCYDLQKDPRYESGIWKKELEVFLRLKRKAELEAFAKYGLTNITDKYLPQKLELAKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S3</accession>
    <name>A0A087S1S3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AIPR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00671</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19677">
        <property type="protein sequence ID" value="KFM19677"/>
        <property type="gene ID" value="AAA799P11_00671"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.656"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018891">
        <property type="entry name" value="Abortive_phage_infection"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10592">
        <property type="entry name" value="AIPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="583" mass="67209" checksum="4E69E4D8BF078B96" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1V6</accession>
    <name>A0A087S1V6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19710">
        <property type="protein sequence ID" value="KFM19710"/>
        <property type="gene ID" value="AAA799P11_00450"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="211" mass="24544" checksum="D11DB93077B66E34" modified="2014-10-29" version="1">MVIGIAIGMFLAGLGFGYVAFMGTTHTGNMMINNQAIMQDPQFQQQMMNQFLADPESRNQMMEFITQDPTMMRSWMENTQHVDEMVAVMRENHDFSMQMMYTMMDDPALRLQMIGHMTENPETMQQMTSMMGSGMQGMMNQDMMMQMMQDPETKEKMLQIMSEHVDEMQKLLSSELTDKEFDAQMVELMQDHMSDMQSLMMSSQPMNDSMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1V8</accession>
    <name>A0A087S1V8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Nitrous-oxide reductase protein</fullName>
            <ecNumber evidence="8">1.9.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nosZ</name>
        <name evidence="8" type="ORF">AAA799P11_00452</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.9.3.1" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19712">
        <property type="protein sequence ID" value="KFM19712"/>
        <property type="gene ID" value="AAA799P11_00452"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019020">
        <property type="entry name" value="Cyt-c552/DMSO_Rdtase_haem-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028096">
        <property type="entry name" value="EfeO_Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13473">
        <property type="entry name" value="Cupredoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09459">
        <property type="entry name" value="EB_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2" id="KW-0349">Heme</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_CUA" evidence="7">
        <location>
            <begin position="36"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="362" mass="39947" checksum="FFE63EDAA91B9EC2" modified="2014-10-29" version="1">MVSKKSINSTVVGSVVAVIVIGFVMMNYTPMGGISGETKSFDIVSFQWGFEPQFIEVNKGDHVTLNLKTDDVPHGIAIEEYQINEPIMIEKDGKLEFVADKPGTFEFYCSIPCGAGHAEQGGFLIVRDPSEPETKLLTSIKSDGGIIVDGIVDEKWNKVSETIFPTVYVHENREVKAKSLNDGERIYFLLRWYDDDANDNGTTETDRIALGFDISGDSDIAMGAAGVPHIKIPQRTIGDGVVDIWHWKAFDSHTESPNVIDDEFAGPFEQLKDHYYRDDDNNQGGENDLIATGVYDMNAKEWTVEISRLLVTGDTDVPGFGMTDKQFAVGNEYKIGFAIWDGGQGETAGEHAVTDWGVLKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1W0</accession>
    <name>A0A087S1W0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonucleoside-triphosphate reductase protein</fullName>
            <ecNumber evidence="3">1.17.4.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00454</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.4.2" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19714">
        <property type="protein sequence ID" value="KFM19714"/>
        <property type="gene ID" value="AAA799P11_00454"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.434"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008998">
        <property type="term" value="F:ribonucleoside-triphosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13192">
        <property type="entry name" value="Thioredoxin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin-like_fold" evidence="2">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="73" mass="8364" checksum="68E1F525641B874A" modified="2014-10-29" version="1">MKVEILTTPGCSNCSVVERMLDDMKIPYNVIDVTEKPEYLEKYPIYTAPGIVIDDKLEFTGVPKKQELERKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X1</accession>
    <name>A0A087S1X1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Regulatory protein spx</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">spxA</name>
        <name evidence="1" type="ORF">AAA799P11_00465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19725">
        <property type="protein sequence ID" value="KFM19725"/>
        <property type="gene ID" value="AAA799P11_00465"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.446"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006660">
        <property type="entry name" value="Arsenate_reductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30041">
        <property type="entry name" value="PTHR30041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03960">
        <property type="entry name" value="ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51353">
        <property type="entry name" value="ARSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="90" mass="10558" checksum="B0AC635712AE4A57" modified="2014-10-29" version="1">MSKDIEKRDFFKDPFSETELKKIIKMTGKKPSELLRKRDKMYKELDLENVKKTDTQIIKLMVKYPGLILRPIIISKNKAYVGKVDAAKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y0</accession>
    <name>A0A087S1Y0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00474</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19734">
        <property type="protein sequence ID" value="KFM19734"/>
        <property type="gene ID" value="AAA799P11_00474"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.457"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="188"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="426" mass="48526" checksum="FF0815679C710240" modified="2014-10-29" version="1">MVFGWGKKKQEEKPVETAPQTKEISLNEVKNIVAELEKLRESQTVSEVKHLRNSTAPLIDELIKVGKMLEKDTLNVDDIDKHLAIIVVRGKKQVIDVIKKGVVSLPEVSNIENAKKLDTSLNQILKKVGDVLGRQTRVIHIFAKKYATQLKDNLEVMNQNHSEIHDILQNYDNTKSSSSEILDTLKKIDTLKSKKIEKTQKIADTNNELESVKEHISSLEKSIDEIKSSDEYRKYIESKKSLESFKTQKSKIKDEINSQFTKISRPLGRYEYASSLDKEQKSILTTLAENPFDVLTPQNKDSIIVILENVRKGITSGSISVKDVDKTLSQITETEETLDGFISKVSEYFQKYQQMSDVLNSLRSEKLISLESELTKTSENRDDLQLKSETFQGEVDEIDSSIPQLVSEIEKKLRLFSNTKYTLLMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S202</accession>
    <name>A0A087S202_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ADP-dependent (S)-NAD(P)H-hydrate dehydratase</fullName>
            <ecNumber evidence="1">4.2.1.136</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">ADP-dependent NAD(P)HX dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">nnrD</name>
        <name evidence="2" type="ORF">AAA799P11_00501</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6S)-NADHX + ADP = AMP + H(+) + NADH + phosphate</text>
            <dbReference type="Rhea" id="RHEA:32223"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.2.1.136"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6S)-NADPHX + ADP = AMP + H(+) + NADPH + phosphate</text>
            <dbReference type="Rhea" id="RHEA:32235"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.2.1.136"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NnrD/CARKD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.136" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19756">
        <property type="protein sequence ID" value="KFM19756"/>
        <property type="gene ID" value="AAA799P11_00501"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.479"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052855">
        <property type="term" value="F:ADP-dependent NAD(P)H-hydrate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046496">
        <property type="term" value="P:nicotinamide nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01171">
        <property type="entry name" value="YXKO-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01965">
        <property type="entry name" value="NADHX_dehydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000631">
        <property type="entry name" value="CARKD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01256">
        <property type="entry name" value="Carb_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00196">
        <property type="entry name" value="yjeF_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51383">
        <property type="entry name" value="YJEF_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0520">NAD</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="287" mass="30491" checksum="541524F8BDECF834" modified="2014-10-29" version="1">MVRKTLTTALVKKFIPARKAKSRKGENGIVLVVGGSYIYHGAPILSSIAALRSGTDLVYTSVPKINVSSTRSVSPNLIVIPLVDQKLTRGAVNKLLGALPRKLDSATIGMGLAIQEKNALLHLVKSLLDRDVRLSLDASALIPEVLPLLANKNVVVTPHAGEFKRLFGQAPPDSKNNKIKLVEEKAKEFGITILLKGATDVISNGTTTYLYTKKIPAMTVGGTGDVLSGLTAGLLSKNRKPLESAAAAAFINGLAGKAVQKKLGLHMTSMDLLTEIPSVMKPFDKIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S206</accession>
    <name>A0A087S206_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Type II methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.113</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">N-4 cytosine-specific methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">AAA799P11_00505</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = an N(4)-methyl-2'-deoxycytidine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:16857"/>
            <dbReference type="Rhea" id="RHEA-COMP:11369"/>
            <dbReference type="Rhea" id="RHEA-COMP:13674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:85452"/>
            <dbReference type="ChEBI" id="CHEBI:137933"/>
            <dbReference type="EC" id="2.1.1.113"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.113" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19760">
        <property type="protein sequence ID" value="KFM19760"/>
        <property type="gene ID" value="AAA799P11_00505"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.486"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015667">
        <property type="term" value="F:site-specific DNA-methyltransferase (cytosine-N4-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017985">
        <property type="entry name" value="MeTrfase_CN4_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00093">
        <property type="entry name" value="N4_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0680">Restriction system</keyword>
    <keyword evidence="5 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="8">
        <location>
            <begin position="35"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="277" mass="31942" checksum="CB65720AE4DC4E0A" modified="2014-10-29" version="1">MSLIKTVRKQKKIELNTIYNENCLKTMSQIPDNFVDLVVTSPPYDNMRKYSGNNFDEFEEIATDLYRITKEGGVVVWIISDQTKQGNESGTSFRHALYFKQIGFNLFDTMIYLKPPRGAAGNNKTYWQTFEYMFIFSKGNPKTINLILDRENKEARNGDNGTKRLYDGSLKKLSRGGYSKKGRRTNVWQYNIGNGHSATDSIAHEHPAIFPEKLAEDHILSWSNKNDVVYDPFMGSGTTAKMAFLNKRKFLGSEISKDYYRISKKRIKNCQTQMRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S216</accession>
    <name>A0A087S216_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19770">
        <property type="protein sequence ID" value="KFM19770"/>
        <property type="gene ID" value="AAA799P11_00515"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="45" mass="5341" checksum="E68A4FD9DC3BB0CA" modified="2014-10-29" version="1">MTKTKQELVFLPEMATYKRRRKYKCTICGKTSWLQGRRPSAEGVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S229</accession>
    <name>A0A087S229_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein YxiE</fullName>
            <ecNumber evidence="2">3.1.1.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00528</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.61" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19783">
        <property type="protein sequence ID" value="KFM19783"/>
        <property type="gene ID" value="AAA799P11_00528"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.510"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008984">
        <property type="term" value="F:protein-glutamate methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="6"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="143" mass="15518" checksum="88B1377B0178ED7C" modified="2014-10-29" version="1">MAIKTKKILVPLDGSKNSIRGLDMAIHLARQSQGVIVALSVKSVPGIYAIHPLGFLDFNSTKEMKKTLDDAKLRAAKKGIKLIPKAVSGDPGYDIARFANNKKNRIDLVVIGARGRSSAKELFLGSVSNYVLHKSKKPVLIVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S291</accession>
    <name>A0A087S291_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00374</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19845">
        <property type="protein sequence ID" value="KFM19845"/>
        <property type="gene ID" value="AAA799P11_00374"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.363"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="58" mass="7070" checksum="645B9BC135FF1144" modified="2014-10-29" version="1">MEYDIKKKIHITCPHCEKAIETEIELELEIEEKKKKDKKKDKKKDKKEKKKSKKKSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A5</accession>
    <name>A0A087S2A5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative HD superfamily hydrolase ral function prediction only protein</fullName>
            <ecNumber evidence="2">2.1.1.206</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00393</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.206" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19859">
        <property type="protein sequence ID" value="KFM19859"/>
        <property type="gene ID" value="AAA799P11_00393"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.378"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006675">
        <property type="entry name" value="HDIG_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00277">
        <property type="entry name" value="HDIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="22"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="23814" checksum="239ADE51DB249F13" modified="2014-10-29" version="1">MKALELLKKDVKKIMENDPAHDYEHIMRVYKNAQKICKKEKANEKLVLSAALLHDIVSYPKSDKRSKISSIESAKKSKQILKKYDFDDDEITIVSDAIRDHSFSQKKTPKTIEGKILQDSDRLDALGAIGIARVFATGGSLKRPFYNIDDPFCKKRTPDDKTWTVDHFFQKLLKLESLMNTKSGKIEAKRRTRILKEYLKQLKQEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C6</accession>
    <name>A0A087S2C6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative zinc</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00414</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19880">
        <property type="protein sequence ID" value="KFM19880"/>
        <property type="gene ID" value="AAA799P11_00414"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.399"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005358">
        <property type="entry name" value="Puta_zinc/iron-chelating_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03692">
        <property type="entry name" value="CxxCxxCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="198" mass="23134" checksum="09D637C28E082B8D" modified="2014-10-29" version="1">MSFMRWEQKEIVEFKCIEECSQCCIEREYYPSKKFGKIGVLILPEEKERVEKLADENNLDVKILPRIGVSKDRDTIPTKILAYQMMGIEKNGNTCPFLDTESGNKSPHNGFPCKIYKDRPLACRTYPLIESDPITLDEKCKFCKEYKTADENLNSEIESLMKIKEQMNTEYPFIWRFATEIGEGEDNNLFESGWILEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M3</accession>
    <name>A0A087S2M3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protein HflC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hflC</name>
        <name evidence="4" type="ORF">AAA799P11_00281</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19977">
        <property type="protein sequence ID" value="KFM19977"/>
        <property type="gene ID" value="AAA799P11_00281"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.274"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03401">
        <property type="entry name" value="SPFH_prohibitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000163">
        <property type="entry name" value="Prohibitin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23222">
        <property type="entry name" value="PTHR23222"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00679">
        <property type="entry name" value="PROHIBITIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="PHB" evidence="3">
        <location>
            <begin position="27"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="182"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="279" mass="30953" checksum="485D327A3E5D59FD" modified="2014-10-29" version="1">MNVNMNAAKGVAIGIVILIIIGVVAFASVKIVDAGHRGVLLHWNAVDLTQPPLDEGLHFVVPFQDDVVNIEIRTLKYANDARSASRDLQTVETTVTVNYHPDRESVHRLYKNLGLDYEDRVIQPAIEETVKQVTARYNAEELITKRPLVKDDIESSIRERLDQFDIVTEVISITDFEFSPLFAQAIEAKVEAEQNALKAENDLRRIEVEARQREANAIGLANANIAEAKGEAEAIAIINKALAENPNYLEWLKTQAWDGKLPLVVGEGGTPFIQIPVSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M5</accession>
    <name>A0A087S2M5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00283</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19979">
        <property type="protein sequence ID" value="KFM19979"/>
        <property type="gene ID" value="AAA799P11_00283"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.276"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="182" mass="20937" checksum="ABE4FDE3E5BF227A" modified="2014-10-29" version="1">MDEEVNPIKDYLFDYIKKSQTIPQLISEKKFDVVINEIIQNCYDKIITMDEKDTAVGVLATGILHYLLTNALVNSQRKIEYQGMELDIIVPDIKTLEKDPKMTLVICIPKTSDKQIIEKKITQLEKVQPIKENIWVVLSEDVSIRQKKFVLSKENSSFSKIIFDIAQFSNVGGANKFKILRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M8</accession>
    <name>A0A087S2M8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative disulfide bond formation protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bdbD</name>
        <name evidence="4" type="ORF">AAA799P11_00286</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19982">
        <property type="protein sequence ID" value="KFM19982"/>
        <property type="gene ID" value="AAA799P11_00286"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.279"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="40"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="236" mass="25970" checksum="1E5E521C59939C76" modified="2014-10-29" version="1">MIHGPSLAIGAVISAAVLVVVFLSFDVIGNEPELVIQPTPTIQPEGPAKVTMETFLANGSPMLGDSDAPVTLVEFGDYQCHFCNVFFHSTEGNILKNYVETGKVRMIFKDYNIIGPDSINASHGAHCANDQGMFWEYHDILYNNWTGENNGWASSENLLRFAQEIGLDVDKWSECMKSGVHSQIIVASNDDARALELTGTPAFFVIGPDGKVTKLFGAQPYETFERLFETELEKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N4</accession>
    <name>A0A087S2N4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00292</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19988">
        <property type="protein sequence ID" value="KFM19988"/>
        <property type="gene ID" value="AAA799P11_00292"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="55" mass="6490" checksum="F61D71BDC2FE6119" modified="2014-10-29" version="1">MHESFYEATMVEFTIWEDEKEMVISKYNTFSDLPPHLHDELEKDSSIITIKGRNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R1</accession>
    <name>A0A087S2R1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20015">
        <property type="protein sequence ID" value="KFM20015"/>
        <property type="gene ID" value="AAA799P11_00320"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.313"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="128" mass="14697" checksum="38222D05D92D31BC" modified="2014-10-29" version="1">MVKTPADKWKSTIIKYRKQCQKILEVSKSVRYAGVINIYGRTLAGIVQPNLKPLLKSEQVKNEFFIISTLMSLRKNTANTVGKLEHVILQHQKVTIVILQKNDITYYVSINRKEKGLEKIISSIKKII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T6</accession>
    <name>A0A087S2T6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20040">
        <property type="protein sequence ID" value="KFM20040"/>
        <property type="gene ID" value="AAA799P11_00350"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.339"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="115" mass="12713" checksum="1502DD26DB0E8E26" modified="2014-10-29" version="1">MQYFQALKLGQKRVADAREYLNKLTDGKAMPALALTDTKSDVWKPVGEENLYAFVDESAGFVLTDNSGYILALVDNSGASKTIVQGVTKEQKERLEKAFESDNIPKFEGKVILPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U8</accession>
    <name>A0A087S2U8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00362</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20052">
        <property type="protein sequence ID" value="KFM20052"/>
        <property type="gene ID" value="AAA799P11_00362"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.351"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="7801" checksum="82DE84C124828F16" modified="2014-10-29" version="1">MVLTDKEKIVAVISNGIAVFSLLQEREELPKNTTMYDFVLKVIPEDLKSELSAELIDEVFQYVTSAHNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X1</accession>
    <name>A0A087S2X1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00146</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20075">
        <property type="protein sequence ID" value="KFM20075"/>
        <property type="gene ID" value="AAA799P11_00146"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="122" mass="14346" checksum="D9C41D39FB4A996B" modified="2014-10-29" version="1" fragment="single">MHATKLFRIKKEFSSQQMNLDDTLIPSTLIEMYKKIPDYNTSQYIFMINNGKAVPSETLSFSLQYPKNYLLPKLQEFFDEFSELKNSITKKDNIIRGHEKSIKEQKIYTETALTEKDNIIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X2</accession>
    <name>A0A087S2X2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycoprotein 3-alpha-L-fucosyltransferase</fullName>
            <ecNumber evidence="1">2.4.1.214</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00147</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.214" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20076">
        <property type="protein sequence ID" value="KFM20076"/>
        <property type="gene ID" value="AAA799P11_00147"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018392">
        <property type="term" value="F:glycoprotein 3-alpha-L-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="247" mass="28623" checksum="BDEBA387C46BD892" modified="2014-10-29" version="1">MTSKIVVMYRLKNEERWIKQSIESIYDLCDEIVVLDDNSTDNTKTICSQFDKVVDIHTKTDSTFDEARDRNFLLDMALKRNPDILLSLDGDEIFLPNSSKIIQEEIDILHPEAQVFEFQFLTLWDSSNQIRFDGAFSSHWQKRMFRLKDQPNDLKINDSPYPRNLHCGSIPTNTIGIENPVRSNAKIFHCASFDESLRKTTHAWYVSHDPDNPLTDNYQHLLNAKGRFSGSALKFQTIPSDLSYDLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X7</accession>
    <name>A0A087S2X7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Demethylmenaquinone methyltransferase protein</fullName>
            <ecNumber evidence="3">2.1.1.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ubiE</name>
        <name evidence="3" type="ORF">AAA799P11_00152</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.41" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20081">
        <property type="protein sequence ID" value="KFM20081"/>
        <property type="gene ID" value="AAA799P11_00152"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003838">
        <property type="term" value="F:sterol 24-C-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3130.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025282">
        <property type="entry name" value="DUF4214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038255">
        <property type="entry name" value="PBS_linker_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13946">
        <property type="entry name" value="DUF4214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DUF4214" evidence="2">
        <location>
            <begin position="19"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="141"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="296" mass="34241" checksum="EEBC23B0B9C38193" modified="2014-10-29" version="1">MKSFSRLGLMNEEDLKKIVRKCYLDYLNREPDDKGLKHYVNLMKTKKITKQELIDTFKASPEYKLSHPVELESDTAINVRMKKEWNERAKMNPLFVIATDHSESEEDFWASGVTECNFILGKDIGRFQKIIENKDPSKMNVLEIGCGIGRILIPMGKIFGNVVGIDVSSEMVMLGQKHVADIPNCSIVENNGIDLSKFTENSFDFCYSFIVFQHIPDKNVVEKYISEVSRVLKPNCLFRFQVRGTITTKPNEITTWDGVQFTSEEIHKIADLNNFEIIEEGNDHEEYYWLTFKTKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S328</accession>
    <name>A0A087S328_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Threonine synthase</fullName>
            <ecNumber evidence="5">4.2.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">thrC</name>
        <name evidence="9" type="ORF">AAA799P11_00203</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the gamma-elimination of phosphate from L-phosphohomoserine and the beta-addition of water to produce L-threonine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>H2O + O-phospho-L-homoserine = L-threonine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10840"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57590"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="EC" id="4.2.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 5 6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the threonine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.1" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20132">
        <property type="protein sequence ID" value="KFM20132"/>
        <property type="gene ID" value="AAA799P11_00203"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.202"/>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004795">
        <property type="term" value="F:threonine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004450">
        <property type="entry name" value="Thr_synthase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026260">
        <property type="entry name" value="Thr_Synthase_bac/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038945">
        <property type="entry name" value="Thr_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00260">
        <property type="entry name" value="thrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 5 6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="PALP" evidence="8">
        <location>
            <begin position="68"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="372"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="7">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR038945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR038945-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR038945-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="404" mass="43742" checksum="D94B961985AF2084" modified="2014-10-29" version="1">MTRTSLQCRECKKEYETAFKYICDDCFGPLDVKYDFPTITKETFSSRDQTYWRYFELLPIENKSNIVSIGTGMTPLTKAENLGKKLGLNNLYIKNDSVNPTFSFKDRPAGVAISKAKEFGLSAVGCASTGNLASATAAHAAKGGFPCHVFAPSNIEMAKIAQALSYGANYVAVDGTYDDANRIAAQIGDSKGIGIVNINMRSHYVEGSKTFSYEVAEQLDWQVPDQLIVPVGSGAMLNAICKGFEELQTVSLVGDVSNMHMIAAQPHGCAPIVDAFKKNSTDVIPVENPDTVAKSLAIGDPGDGRYVLKRLQQYNGFAEESDNREILDAILLLAKTEGIFTEPAGGVSISVLRKMVEQGKIDKNDKVVCYVTGNGLKATESIMEVLEKPQVLKADISEVSAVVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S353</accession>
    <name>A0A087S353_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GTPase HflX</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">GTP-binding protein HflX</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">hflX</name>
        <name evidence="9" type="ORF">AAA799P11_00233</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5">Monomer. Associates with the 50S ribosomal subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="5">May associate with membranes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20157">
        <property type="protein sequence ID" value="KFM20157"/>
        <property type="gene ID" value="AAA799P11_00233"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.227"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11060">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00900">
        <property type="entry name" value="GTPase_HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030394">
        <property type="entry name" value="G_HFLX_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032305">
        <property type="entry name" value="GTP-bd_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016496">
        <property type="entry name" value="GTPase_HflX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025121">
        <property type="entry name" value="GTPase_HflX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042108">
        <property type="entry name" value="GTPase_HflX_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10229">
        <property type="entry name" value="PTHR10229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16360">
        <property type="entry name" value="GTP-bdg_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13167">
        <property type="entry name" value="GTP-bdg_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006809">
        <property type="entry name" value="GTP-binding_hflX_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03156">
        <property type="entry name" value="GTP_HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51705">
        <property type="entry name" value="G_HFLX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="9" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hflx-type G" evidence="8">
        <location>
            <begin position="184"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="190"/>
            <end position="197"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="215"/>
            <end position="219"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="236"/>
            <end position="239"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="304"/>
            <end position="307"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="333"/>
            <end position="335"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR006809-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR006809-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="370" mass="42074" checksum="E9A831E9A33EA359" modified="2014-10-29" version="1">MKSAILITYDKEDVISEAKGLCDAAGFQVVHTMKQKFLKKPKYGISGGILEQLEEISEKIRPDVIVFDEVLKPSQNYNLASVLHREILDREALILEIFESRASSAESKLQVKLAQLRYEMARAKEKVRLSSMGEQPGFMGIGKFEVDVYYNDIKHRMNTIRSKLEKAGKQRELHRQGRKRMGFKTISLAGYTSAGKTTLFNTMTGETRDQSSELFTTLSTTTRRVTINQEPFLISDTVGFISKLPAYMIDAFKSTLEELGHTDIIIVVIDISDSIFELKKKFSSCMRTLSELGVEKDRMVYALNKSDLLENSEIEEKIETLNLADNKKWIPVSAKTGKNVKQLKELIRDILESYNSHKFEKQGVEKTFGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S380</accession>
    <name>A0A087S380_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA repair protein RAD50</fullName>
            <ecNumber evidence="4">3.6.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00260</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.-.-" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20184">
        <property type="protein sequence ID" value="KFM20184"/>
        <property type="gene ID" value="AAA799P11_00260"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.254"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024975">
        <property type="entry name" value="NOV_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13020">
        <property type="entry name" value="DUF3883"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="113"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="471"/>
            <end position="627"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="440"/>
            <end position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="1111" mass="128593" checksum="1CC4D5E19C2B9591" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F4</accession>
    <name>A0A087S3F4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Virginiamycin B lyase protein</fullName>
            <ecNumber evidence="11">3.1.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">vgb</name>
        <name evidence="11" type="ORF">AAA799P11_00005</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.17" evidence="11"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20258">
        <property type="protein sequence ID" value="KFM20258"/>
        <property type="gene ID" value="AAA799P11_00005"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.5"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004341">
        <property type="term" value="F:gluconolactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006825">
        <property type="term" value="P:copper ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046688">
        <property type="term" value="P:response to copper ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032694">
        <property type="entry name" value="CopC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007348">
        <property type="entry name" value="CopC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008457">
        <property type="entry name" value="Cu-R_CopD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014755">
        <property type="entry name" value="Cu-Rt/internalin_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34820">
        <property type="entry name" value="PTHR34820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04234">
        <property type="entry name" value="CopC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05425">
        <property type="entry name" value="CopD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0186">Copper</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="178"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="220"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="249"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="289"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="320"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="358"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="410"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="884"/>
            <end position="904"/>
        </location>
    </feature>
    <feature type="domain" description="CopC" evidence="9">
        <location>
            <begin position="11"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="CopD" evidence="10">
        <location>
            <begin position="321"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF05425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="918" mass="102829" checksum="05252501AA58F111" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G0</accession>
    <name>A0A087S3G0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator TrmB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00011</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20264">
        <property type="protein sequence ID" value="KFM20264"/>
        <property type="gene ID" value="AAA799P11_00011"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.11"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="245" mass="28182" checksum="F309A98C09840E52" modified="2014-10-29" version="1">MAQKFTLDSFDDEFSYKILKSTKKFKTVSEISADCKIPISTTYRRIKDLQKNGVLEATGFIMDGVRFNKYKCTKLLKYGKYNPKVKQILSIITSNLGICYNELQENSKIPNGTLSHYISSMVKDAKIIVKRTSRRSWYFLPDTKPSEINLIINLRKETGRKILSFLLLHGPSSFTDIQKSTIKAPATISLTITHLVELELVKRILGTRPKYELANRDLTFECIKKIEPNTSDKIKERFADTFSYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H5</accession>
    <name>A0A087S3H5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00026</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20279">
        <property type="protein sequence ID" value="KFM20279"/>
        <property type="gene ID" value="AAA799P11_00026"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.26"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="94" mass="11243" checksum="02662E92554AE41F" modified="2014-10-29" version="1">MKHIILVGILVAGIVIGFFSIQFIMNSNLDVMKIFCDRHDDQMYELAEKMRNIRLLQNESTLGNDEYDRLEQEFQKFTDDALERKEWYVENCVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K1</accession>
    <name>A0A087S3K1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Virginiamycin B lyase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00052</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20305">
        <property type="protein sequence ID" value="KFM20305"/>
        <property type="gene ID" value="AAA799P11_00052"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.51"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="534" mass="59137" checksum="4191A9BE85396FD7" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L2</accession>
    <name>A0A087S3L2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Virginiamycin B lyase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00063</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20316">
        <property type="protein sequence ID" value="KFM20316"/>
        <property type="gene ID" value="AAA799P11_00063"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.61"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="518" mass="58604" checksum="57A4C03D7EF3B629" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q0</accession>
    <name>A0A087S3Q0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00101</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20354">
        <property type="protein sequence ID" value="KFM20354"/>
        <property type="gene ID" value="AAA799P11_00101"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027560">
        <property type="entry name" value="PEFG-CTERM"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04296">
        <property type="entry name" value="PEFG-CTERM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="181" mass="20460" checksum="30818320519151A6" modified="2014-10-29" version="1">MVVTPANVYAEHVLEIEAFAQYLDISQLESEKVTFVFDEKSYDIYYGYRGSLDDMSSHSSYPTLSSMDINEENKSIDIVMEAVPEKTDFWIRVPDDVLYAENEKFTVLVDGIDTGYDLMKFPTDHVIGFIIDGDTKNIEIIGTHVIPEFGAYATLILAISIVGLVFFARKFTFGNSLPRIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R1</accession>
    <name>A0A087S3R1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkyl hydroperoxide reductase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00112</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20365">
        <property type="protein sequence ID" value="KFM20365"/>
        <property type="gene ID" value="AAA799P11_00112"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.111"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016209">
        <property type="term" value="F:antioxidant activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="3"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="221" mass="24944" checksum="17F6799C77AC9026" modified="2014-10-29" version="1">MSAVIGEKVPNFGVSEWVQGAPTNFDQEKDHIVLVEVFQVNCPGCFMHALPEAIEIYNKYKDEGVRVIGIATAFEDFDKNTLDNLKMLAETGEVVGETKSAFQMSGQLQEGNKLPYKIPFPLAMDNLVKTTGEISQEKIMQFIYPQIPEFDSQPEEYKNQIIQRVKDYMKSKEYSAETFEKFALQGTPSTILVDRKGILRDVSFGQVGQAEAMIQKLLNED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R2</accession>
    <name>A0A087S3R2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00113</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20366">
        <property type="protein sequence ID" value="KFM20366"/>
        <property type="gene ID" value="AAA799P11_00113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="30" mass="3345" checksum="D67961B9D3702BBE" modified="2014-10-29" version="1">MEEGQIIVPLLIAAAVGIFVGTRLWIMFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R6</accession>
    <name>A0A087S3R6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00117</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20370">
        <property type="protein sequence ID" value="KFM20370"/>
        <property type="gene ID" value="AAA799P11_00117"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.115"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="171" mass="19602" checksum="5CA70828F78C8585" modified="2014-10-29" version="1">MNKYSVITTIAIIVIVTPFVFSIMNIAGSQQLEYRWHSPGTFSFFTMLNDGETEFCNTLPFWMTFEKFEVSVFYTEKYLGSYVITPLTLNPLSSSVQEGIFSSEDIEEAQHIFMNFDFSFDSGETRMDTNKFVVEVHTDTPILGIIPYSSTTHMSAFEFDEKMNAEDLTCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S8</accession>
    <name>A0A087S3S8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Multidrug resistance protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">blt</name>
        <name evidence="3" type="ORF">AAA799P11_00129</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20382">
        <property type="protein sequence ID" value="KFM20382"/>
        <property type="gene ID" value="AAA799P11_00129"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.128"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="2">
        <location>
            <begin position="6"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="155" mass="17069" checksum="2B91979CA23878C9" modified="2014-10-29" version="1">MQKVQVNNLVRSATFFQHAGISIIFVFMPIIAQGVTDSVFEIGLLVASFSFAQILSEIYFGRHSDKKGTRLKFIRIGFIGCAIAFGMHYFATDLSMFFLVRIAAGVASGIMIPAMVAYTYEANVDKKRAATVISFHALGWMAGIAARMALKEMQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T3</accession>
    <name>A0A087S3T3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00134</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20387">
        <property type="protein sequence ID" value="KFM20387"/>
        <property type="gene ID" value="AAA799P11_00134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="58" mass="6926" checksum="542F02DE04A2A315" modified="2014-10-29" version="1">MNLYDKKIIKCSRCKKTVGEIDMDVKIVDVVCKNCKKYDQDELSYEYLNKRMIETVFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RN99</accession>
    <name>A0A087RN99_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase protein</fullName>
            <ecNumber evidence="1">4.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01521</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000099">
        <property type="protein sequence ID" value="KFM14953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14953">
        <property type="protein sequence ID" value="KFM14953"/>
        <property type="gene ID" value="AAA799P11_01521"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="104" mass="11279" checksum="AEE588BE616BD5E6" modified="2014-10-29" version="1" fragment="single">IERISCYAMPMNILKKTSEELKKMNEAGLDMFYLGIESGSDIVLKKVTKGAIGKTIIKSVNKAKDAGYIMSCMVILGLGGRKYSKEHIKGTAEVISACSPNYVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNH7</accession>
    <name>A0A087RNH7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01517</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000096">
        <property type="protein sequence ID" value="KFM15031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15031">
        <property type="protein sequence ID" value="KFM15031"/>
        <property type="gene ID" value="AAA799P11_01517"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="13018" checksum="9100FC035CA54566" modified="2014-10-29" version="1" fragment="single">KLYNKEKFDLVINDGDMGSNILAKNRNIPSLFITNQFRPKLYSSRSYLYPSLIFVAKQIQKASKILVADSPPPYTMCEYNLNFIKEAEDKVTYVGHFTNSKKINKTESSDLEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPV0</accession>
    <name>A0A087RPV0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01498</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000085">
        <property type="protein sequence ID" value="KFM15504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15504">
        <property type="protein sequence ID" value="KFM15504"/>
        <property type="gene ID" value="AAA799P11_01498"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="37" mass="4298" checksum="AB8A9E276A8644E2" modified="2014-10-29" version="1" fragment="single">MYPERTDETNPDVKESFFELLLKTDFAILEPPKIAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQF2</accession>
    <name>A0A087RQF2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partition protein Smc</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01486</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000077">
        <property type="protein sequence ID" value="KFM15706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15706">
        <property type="protein sequence ID" value="KFM15706"/>
        <property type="gene ID" value="AAA799P11_01486"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="7"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="191" mass="22065" checksum="56BB8B07192F8B6E" modified="2014-10-29" version="1" fragment="single">MKNAXXEKEELQTKINELETQKESKNEVLVKLREKEQELIETSGSSIGQLKEFDDKLKVLSDKDRELTKQINTLERQSDSLNRDLRDLVENETKLQQILSAFGFDKDMETFDVESIVQGLSAELASLNALNAKAPETYLEVSYGYRSMSTRKNSLEEERNSIVKCIEDIEKDKRQTFLDAFDKVDKEIKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQI9</accession>
    <name>A0A087RQI9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01477</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000074">
        <property type="protein sequence ID" value="KFM15743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15743">
        <property type="protein sequence ID" value="KFM15743"/>
        <property type="gene ID" value="AAA799P11_01477"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="71" mass="7903" checksum="2C0AFBE482597293" modified="2014-10-29" version="1" fragment="single">MQDGLGNVFVEVVLTFSIGNISEKFLINAKTDLKFFETLANTSMFVLNSPESQYGKDNVIAVQLPRPEKAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQT7</accession>
    <name>A0A087RQT7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Prefoldin subunit beta protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pfdB</name>
        <name evidence="3" type="ORF">AAA799P11_01467</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000069">
        <property type="protein sequence ID" value="KFM15841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15841">
        <property type="protein sequence ID" value="KFM15841"/>
        <property type="gene ID" value="AAA799P11_01467"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1374"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016272">
        <property type="term" value="C:prefoldin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002777">
        <property type="entry name" value="PFD_beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009053">
        <property type="entry name" value="Prefoldin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01920">
        <property type="entry name" value="Prefoldin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM15841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="99" mass="11345" checksum="E44822030ADEE775" modified="2014-10-29" version="1" fragment="single">KQHLEMEKAETEKALEELKKVGDADAVYKQAGTVLLKSTKKELVDELEEKQEMAKTRATVLEKQETRVKETLKEQEAKITEMMKSGSETPKPEEDNPRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTD5</accession>
    <name>A0A087RTD5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01413</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000044">
        <property type="protein sequence ID" value="KFM16739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16739">
        <property type="protein sequence ID" value="KFM16739"/>
        <property type="gene ID" value="AAA799P11_01413"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1340"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="29187" checksum="36B45E2381BCA59D" modified="2014-10-29" version="1">MSLIVGFTILFSVLVVDDAFGTFRESRDTIKISQTNEYANYVHFQPEWKSYPRNLIVDVTTTWEREVIPGEEEQSDITKHGAKQRQNGLQYVNSKPVVAVQYDYRDCESQWFHYAKTGLDFIGYNLNFFEENSSIPNSAYSDDSQKQKLQNGFAQFVPICTSKESTTYEYTVSVNDNTIGFDVYFVPSYVQQWYYFLYPENFEHYSNEGCFANNFQKFSGTCSGVNKNGGLLIVIPDELSRPMTKISVNLVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RU44</accession>
    <name>A0A087RU44_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nucleoside-diphosphate kinase protein</fullName>
            <ecNumber evidence="3">2.7.4.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01390</name>
        <name evidence="3" type="ORF">AAA799P11_01395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.6" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000039">
        <property type="protein sequence ID" value="KFM16993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="JOSZ01000039">
        <property type="protein sequence ID" value="KFM16998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16993">
        <property type="protein sequence ID" value="KFM16993"/>
        <property type="gene ID" value="AAA799P11_01390"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16998">
        <property type="protein sequence ID" value="KFM16998"/>
        <property type="gene ID" value="AAA799P11_01395"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004550">
        <property type="term" value="F:nucleoside diphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.141">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034907">
        <property type="entry name" value="NDK-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036850">
        <property type="entry name" value="NDK-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00334">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54919">
        <property type="entry name" value="SSF54919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NDK" evidence="1">
        <location>
            <begin position="3"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="24" mass="2617" checksum="ED698D3675F99909" modified="2014-10-29" version="1" fragment="single">MTEKSLFIVKPDAVARNLVGEVIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUJ3</accession>
    <name>A0A087RUJ3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Succinyl-CoA synthetase beta subunit protein</fullName>
            <ecNumber evidence="1">6.2.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01368</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.5" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17147">
        <property type="protein sequence ID" value="KFM17147"/>
        <property type="gene ID" value="AAA799P11_01368"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1303"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004775">
        <property type="term" value="F:succinate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="43" mass="4657" checksum="E3F5D2AC5E4422C6" modified="2014-10-29" version="1">MPVFSRLKGTESEKATEMLQGSRTKIFGTVEEAINAAVMGVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUJ9</accession>
    <name>A0A087RUJ9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01379</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000036">
        <property type="protein sequence ID" value="KFM17153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17153">
        <property type="protein sequence ID" value="KFM17153"/>
        <property type="gene ID" value="AAA799P11_01379"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="129" mass="14754" checksum="CC6A5A5F239EDDBA" modified="2014-10-29" version="1">MRNEATMLKESLKEELSRLKKKSGINANFEVLWIPKTDSAKEGEVIGNKIYIYSTNFTDALETLRHEFFDAMICSATTPYLELINVLLSVISEKAYQKKEEIVESLVRMMRHSNPVFADAFSEKDLATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUT8</accession>
    <name>A0A087RUT8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter protein</fullName>
            <ecNumber evidence="2">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17242">
        <property type="protein sequence ID" value="KFM17242"/>
        <property type="gene ID" value="AAA799P11_01360"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="20"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="68" mass="7451" checksum="1B66BD08DAFA09EA" modified="2014-10-29" version="1" fragment="single">MLKVVEIKNLSVKYPDVKALDNVSFEVNEGDFLGIIGPNGAGKSTLFASMLNLHTDYEGTIKFFGQDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV94</accession>
    <name>A0A087RV94_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DITP-XTP pyrophosphatase protein</fullName>
            <ecNumber evidence="2">3.6.1.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01356</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAM1 NTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.19" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17398">
        <property type="protein sequence ID" value="KFM17398"/>
        <property type="gene ID" value="AAA799P11_01356"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1293"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047429">
        <property type="term" value="F:nucleoside-triphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009143">
        <property type="term" value="P:nucleoside triphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002637">
        <property type="entry name" value="Ham1p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01725">
        <property type="entry name" value="Ham1p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="67" mass="7776" checksum="BFFB88D21CA8B1C8" modified="2014-10-29" version="1">MRKLYDLYFVSSNSHKYKEAKSILDSFGINLGFFKSNLEEIQSNSLKEIAEKKAKDAFSKCKKPMIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVI6</accession>
    <name>A0A087RVI6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01322</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17490">
        <property type="protein sequence ID" value="KFM17490"/>
        <property type="gene ID" value="AAA799P11_01322"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1262"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="213" mass="23602" checksum="F48DD13B24115809" modified="2014-10-29" version="1">MVKPQNRTIGVIAVLLMLAASPITVTYSFADDTEVYETKGSSKNERLGVILTEKMVDGKLKVQRYALPSDMSKEDMQRMLSSEISGWAIMSYKAYNAGITLFDGKAIKVGQDLWEISTNGVLSLEEKEFDLELSGKSNGSHVKLHGTASDEDLSYKVVFSGKITENEKVFEVFFNSAVNPEMGQNIKFLQIGATSFEKSVDSNQEFKNSISVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ9</accession>
    <name>A0A087RVJ9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17503">
        <property type="protein sequence ID" value="KFM17503"/>
        <property type="gene ID" value="AAA799P11_01335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="50" mass="5996" checksum="21AF5F408D21ED26" modified="2014-10-29" version="1">MIQNVLEKEARLKELVIKLLEEKNLSDFELLDSLFDEIKEELQNHQKNLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVK1</accession>
    <name>A0A087RVK1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-acyl-carrier-protein reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01337</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17505">
        <property type="protein sequence ID" value="KFM17505"/>
        <property type="gene ID" value="AAA799P11_01337"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="11281" checksum="2F14F1439DDF815E" modified="2014-10-29" version="1" fragment="single">MDFKNKSVLITGASSGIGKQSAIEFAKLGANLILVARRKEKLDELANELEKFNVTVLVCQCDVSNKEQVKEMSKTVLEKFDSIDILVNNAGFAIYGSVKNLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL1</accession>
    <name>A0A087RVL1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pyridoxal-5'-phosphate-dependent protein subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01311</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17515">
        <property type="protein sequence ID" value="KFM17515"/>
        <property type="gene ID" value="AAA799P11_01311"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1250"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="209" mass="22738" checksum="7DB766081D80D678" modified="2014-10-29" version="1">MTLYNPQAYTEHEVDFENAKLILKYMVDKGHDIGESSALELYAALEMAYKGEIKKAVVIIADGIEKYKKNFEMIGKSDVPMRVSLEDAAAVAGDYDNIIWVHTQYTPKDEGIEIIAKSLGVDKSKITIPKASTINNLLSTQQVPEELSKELEGSKGKSLLVCMAGNTSLMTAQVLASKGIVAQSLNGGITNLPEGRGKNPGEYIQAARE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL2</accession>
    <name>A0A087RVL2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ASCH domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01312</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17516">
        <property type="protein sequence ID" value="KFM17516"/>
        <property type="gene ID" value="AAA799P11_01312"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1251"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007374">
        <property type="entry name" value="ASCH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04266">
        <property type="entry name" value="ASCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ASCH" evidence="1">
        <location>
            <begin position="4"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="17861" checksum="EABD3A6C92F550A0" modified="2014-10-29" version="1">MKCLSVSQPFADLIILGKKTIELRKWNTNYRGELLIHAPLKIRKEDCKRLRIGKKFVTGAIVGKVEIYDVKKYESRNQVRLDQRFHFASRDFHDRTFGFLLKNPKAFRVPIPYKGQLGLFEAELPKTKINNKEIVSDIIDEEYRYQWIGHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW4</accession>
    <name>A0A087RWW4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01281</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17968">
        <property type="protein sequence ID" value="KFM17968"/>
        <property type="gene ID" value="AAA799P11_01281"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="299" mass="34942" checksum="FE21F2E3503E8F0F" modified="2014-10-29" version="1">MQNLSLFLVFSAILGILFIPLHDSFAESVIPPRHQWKQFNDIEQLSCREGLVLLQKSNGAPACVSPTAYLKLVDRGYGDFDSKIMKNRPSMMSNLMENLASNTSIMNHWREMMQNNPTMMKNTIQDWVSKMKDNPEFLKNTLGPMTSDTELRQEMIEHMKEHPAMEQSLKEHPRWMESVHDSMMSSGMGPGMNQGMHTGMCPWCPEYERHIESQINIGFTNSDRMMNMMHHMWIDEEMAQDMHEFMLEHPVHMAHMSDQMMGPMLGFMMDDPEIRQQMIDLMLEHQDFMNSIRHNNQPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX01</accession>
    <name>A0A087RX01_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Carbamoyl-phosphate synthase pyrimidine-specific large chain protein</fullName>
            <ecNumber evidence="12">6.3.5.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pyrAB</name>
        <name evidence="12" type="ORF">AAA799P11_01237</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-arginine biosynthesis; carbamoyl phosphate from bicarbonate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.5" evidence="12"/>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18005">
        <property type="protein sequence ID" value="KFM18005"/>
        <property type="gene ID" value="AAA799P11_01237"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1193"/>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00171"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006275">
        <property type="entry name" value="CarbamoylP_synth_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005480">
        <property type="entry name" value="CarbamoylP_synth_lsu_oligo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036897">
        <property type="entry name" value="CarbamoylP_synth_lsu_oligo_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005483">
        <property type="entry name" value="CbamoylP_synth_lsu_CPSase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011607">
        <property type="entry name" value="MGS-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036914">
        <property type="entry name" value="MGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02787">
        <property type="entry name" value="CPSase_L_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02142">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00098">
        <property type="entry name" value="CPSASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01096">
        <property type="entry name" value="CPSase_L_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00851">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48108">
        <property type="entry name" value="SSF48108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52335">
        <property type="entry name" value="SSF52335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01369">
        <property type="entry name" value="CPSaseII_lrg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51855">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 12" id="KW-0436">Ligase</keyword>
    <keyword evidence="7 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ATP-grasp" evidence="10">
        <location>
            <begin position="47"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="10">
        <location>
            <begin position="590"/>
            <end position="781"/>
        </location>
    </feature>
    <feature type="domain" description="MGS-like" evidence="11">
        <location>
            <begin position="848"/>
            <end position="994"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM18005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="994" mass="110567" checksum="A6BA13947209F8FA" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXD3</accession>
    <name>A0A087RXD3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01228</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000022">
        <property type="protein sequence ID" value="KFM18137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18137">
        <property type="protein sequence ID" value="KFM18137"/>
        <property type="gene ID" value="AAA799P11_01228"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1181"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="300" mass="35040" checksum="E7FA829CFC1182EA" modified="2014-10-29" version="1">MRPWIYPKSCRVSELTLDEMFGDGLTSSPCVYLNQDRELSVAIETCVQYLESLVDSIVIRDDEKNVLGIVGGYDLLYYIRRNPFRDFQYETKVKDIMFNELTVVGKTTTFHELMEKWNKTRRAFAIIPNRFQGYSPISARKMLEIGIKCKTNISLSSFPEKEVITFHSDDSLETIVDLMFKHKTRKLLLEFSNQYISDRLVLKEISKILKFQPTVENLLEIPVNQMELDDVTVVKEDMRLDQVCQMMYEMAHPYIIYKDISITPWDVCNVLMSEKMIPSYDVETTIVCPHCGKDFENPKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH3</accession>
    <name>A0A087RXH3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DZANK-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01203</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18177">
        <property type="protein sequence ID" value="KFM18177"/>
        <property type="gene ID" value="AAA799P11_01203"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025874">
        <property type="entry name" value="DZR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12773">
        <property type="entry name" value="DZR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="DZANK-type" evidence="5">
        <location>
            <begin position="8"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="129" mass="14725" checksum="17D9455879DF66AC" modified="2014-10-29" version="1">MVEINKLCPKCDTPTTLEQEFCNKCGNSVDFEKSTQHCGSCGGLVQYPEKFCNKCGNKVNLSTFQYKDDKQSPTYWWYVFPLVFAIFGGVTAWALLREKHYKMATNCLLVSIGVTFVYVIIFVSNTEFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI3</accession>
    <name>A0A087RXI3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Anaerobic ribonucleoside-triphosphate reductase protein</fullName>
            <ecNumber evidence="6">1.17.4.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nrdD</name>
        <name evidence="6" type="ORF">AAA799P11_01218</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.4.2" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18187">
        <property type="protein sequence ID" value="KFM18187"/>
        <property type="gene ID" value="AAA799P11_01218"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1171"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008998">
        <property type="term" value="F:ribonucleoside-triphosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005144">
        <property type="entry name" value="ATP-cone_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012833">
        <property type="entry name" value="NrdD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13597">
        <property type="entry name" value="NRDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51161">
        <property type="entry name" value="ATP_CONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-cone" evidence="5">
        <location>
            <begin position="142"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="8"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="722" mass="79643" checksum="FE33576072755149" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM8</accession>
    <name>A0A087RXM8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">30S ribosomal protein S17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rps17</name>
        <name evidence="3" type="ORF">AAA799P11_01149</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the universal ribosomal protein uS17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18232">
        <property type="protein sequence ID" value="KFM18232"/>
        <property type="gene ID" value="AAA799P11_01149"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1110"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01345_A">
        <property type="entry name" value="Ribosomal_S17_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000266">
        <property type="entry name" value="Ribosomal_S17/S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028333">
        <property type="entry name" value="Ribosomal_S17_arc-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019978">
        <property type="entry name" value="Ribosomal_S17_archaeal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744">
        <property type="entry name" value="PTHR10744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00366">
        <property type="entry name" value="Ribosomal_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00973">
        <property type="entry name" value="RIBOSOMALS17"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03630">
        <property type="entry name" value="uS17_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 3" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="107" mass="11909" checksum="17E67A65F7E5DB1B" modified="2014-10-29" version="1">MTKNIGLKVKEPKRECTDKHCPFHGELAIRGKLFDGKVTGSKARQTITLQKDAPIYFNKFKRYARGKSSIHAHVPGCMDVESGDSVLTAECRPISKSVSYVVVEVRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP1</accession>
    <name>A0A087RXP1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01167</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18245">
        <property type="protein sequence ID" value="KFM18245"/>
        <property type="gene ID" value="AAA799P11_01167"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="51" mass="5857" checksum="78ED44C645F78253" modified="2014-10-29" version="1">MKINSLQIDESSINESFATTNNLFDEFRILSSEIFTQVSELIGELTQNFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP2</accession>
    <name>A0A087RXP2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01168</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18246">
        <property type="protein sequence ID" value="KFM18246"/>
        <property type="gene ID" value="AAA799P11_01168"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="175" mass="18073" checksum="3D44228703405722" modified="2014-10-29" version="1">MTHTKAILGFSLAALFVAMIVPVMADGHLGLLNGEVNNKKGNFEATLTSNFNDCPSGTVCGVGAFTAVPTAGHAATMLAITSHDFFNDHPDQDDDVTVAHTHTLEFDADDDCAAGVALNGAASGIIPGAKHEVDGAHVEVSNLTTDLDTTVHSFTVSFGPHGEICPVLIDDASDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ6</accession>
    <name>A0A087RXQ6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit PurS</fullName>
            <shortName evidence="5">FGAM synthase</shortName>
            <ecNumber evidence="5">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Formylglycinamide ribonucleotide amidotransferase subunit III</fullName>
            <shortName evidence="5">FGAR amidotransferase III</shortName>
            <shortName evidence="5">FGAR-AT III</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit III</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">purS</name>
        <name evidence="6" type="ORF">AAA799P11_01182</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PurS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18260">
        <property type="protein sequence ID" value="KFM18260"/>
        <property type="gene ID" value="AAA799P11_01182"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1139"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01926">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003850">
        <property type="entry name" value="PurS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036604">
        <property type="entry name" value="PurS-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34696">
        <property type="entry name" value="PTHR34696"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02700">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82697">
        <property type="entry name" value="SSF82697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00302">
        <property type="entry name" value="TIGR00302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 5 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="86" mass="9665" checksum="CC09F924F3AFC475" modified="2014-10-29" version="1">MATYNVHVTIENKPGISDPEGDTILNDLVLKGTHKTVSKIKTAKMLKFTIKEKDKKTAQSKIQEICDDLRIYNPMVSKVTIDVFDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR0</accession>
    <name>A0A087RXR0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Sec-independent protein translocase protein TatC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">tatC</name>
        <name evidence="6" type="ORF">AAA799P11_01186</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Forms a complex with TatA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TatC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18264">
        <property type="protein sequence ID" value="KFM18264"/>
        <property type="gene ID" value="AAA799P11_01186"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1143"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033281">
        <property type="term" value="C:TAT protein transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043953">
        <property type="term" value="P:protein transport by the Tat complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00902">
        <property type="entry name" value="TatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002033">
        <property type="entry name" value="TatC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30371">
        <property type="entry name" value="PTHR30371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00902">
        <property type="entry name" value="TatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01840">
        <property type="entry name" value="TATCFAMILY"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00945">
        <property type="entry name" value="tatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="18"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="86"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="164"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="211"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="263" mass="29246" checksum="6B07F2CFADCAF67E" modified="2014-10-29" version="1">MSELDGINQHFEELRKRLLRIVLVIGVITAFILTFHAEPIQFGQTTLYYPTPEPLNNIAAQITNHMKINLVPEDVQLIQTAPGQAFFAQVYIAALVGIVVGMPVIIKELVGFIKPALKENEINVSRSITIPALGLFIAGCAFSYSLVIPYILEFLYRYGESAGLVTFLNVIEFVTFVLQFLLAFGFSFQLPLVMYAISASGMVDADFWRKNIRYAIVIIVIFGAVITPDGSGVTMWFIAGPMIALYATGMALIERKERKKLNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXR3</accession>
    <name>A0A087RXR3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Flavin prenyltransferase UbiX</fullName>
            <ecNumber evidence="5">2.5.1.129</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pad1</name>
        <name evidence="5" type="synonym">ubiX</name>
        <name evidence="7" type="ORF">AAA799P11_01189</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>dimethylallyl phosphate + FMNH2 = phosphate + prenyl-FMNH2</text>
            <dbReference type="Rhea" id="RHEA:37743"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:87467"/>
            <dbReference type="ChEBI" id="CHEBI:88052"/>
            <dbReference type="EC" id="2.5.1.129"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the UbiX/PAD1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.129" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18267">
        <property type="protein sequence ID" value="KFM18267"/>
        <property type="gene ID" value="AAA799P11_01189"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1146"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106141">
        <property type="term" value="F:flavin prenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01984">
        <property type="entry name" value="ubiX_pad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036551">
        <property type="entry name" value="Flavin_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003382">
        <property type="entry name" value="Flavoprotein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004507">
        <property type="entry name" value="UbiX-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43374">
        <property type="entry name" value="PTHR43374"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02441">
        <property type="entry name" value="Flavoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52507">
        <property type="entry name" value="SSF52507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00421">
        <property type="entry name" value="ubiX_pad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 5" id="KW-0288">FMN</keyword>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="1 5" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Flavoprotein" evidence="6">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="9"/>
            <end position="11"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="86"/>
            <end position="89"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>dimethylallyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:88052"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>dimethylallyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:88052"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="185" mass="20358" checksum="8A694985CC492480" modified="2014-10-29" version="1">MKLVIGITGSTGVIYGIRMLETLKKLNIETHLIMSEWGEKCIPMETEFTADYVKSLATEVSDEKNMAASVSSGTHRIDGMVVAPCSMKTLAAIANGYDDTLVARAAGVTIKESRKLILMVRETPLSAIHLENMLKLSRLGIVILPPVTEFYTKPKSIDDIVNHGVGKCLDQFDIEHNLYSRWGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ9</accession>
    <name>A0A087RXZ9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">EVE domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01128</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18353">
        <property type="protein sequence ID" value="KFM18353"/>
        <property type="gene ID" value="AAA799P11_01128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004919">
        <property type="entry name" value="DUF262"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002740">
        <property type="entry name" value="EVE_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007421">
        <property type="entry name" value="Schlafen_AlbA_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038461">
        <property type="entry name" value="Schlafen_AlbA_2_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04326">
        <property type="entry name" value="AlbA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03235">
        <property type="entry name" value="DUF262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01878">
        <property type="entry name" value="EVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EVE" evidence="1">
        <location>
            <begin position="3"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="DUF262" evidence="2">
        <location>
            <begin position="183"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="domain" description="AlbA_2" evidence="3">
        <location>
            <begin position="756"/>
            <end position="891"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="905" mass="104828" checksum="78AD49FBF205E5D2" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY33</accession>
    <name>A0A087RY33_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18387">
        <property type="protein sequence ID" value="KFM18387"/>
        <property type="gene ID" value="AAA799P11_01100"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="47" mass="5260" checksum="BC37C0AA4ECFC1CD" modified="2014-10-29" version="1">MASIKDVGKFFVFIAGGLVAIIVGSFMIRGTMHMWDNPEDDKDQKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY43</accession>
    <name>A0A087RY43_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18397">
        <property type="protein sequence ID" value="KFM18397"/>
        <property type="gene ID" value="AAA799P11_01110"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1071"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="211" mass="23551" checksum="91F98B8BF347A21D" modified="2014-10-29" version="1">MRGIFESLIVFGIMTGLLLPARLLFVEFISDDWLGSFGVITAISLSIIILAKKKKLGIFGPMLERQIYKFQKGKRGIAVFGESVFLLLVLGTMIVAIDQGSSIHSEYMLQNSQNMSMIDSPEQVLEMTNEMTPTDWIVGFLLAPSALLTEFPKMSAAIASIDQSLDGWLMHFYTVGFVEYLELLGILIFYRVSFKRKISSATNQLYAKAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE8</accession>
    <name>A0A087RYE8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">50S ribosomal protein L44e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rpl44e</name>
        <name evidence="4" type="ORF">AAA799P11_01072</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Binds to the 23S rRNA.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="2">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the eukaryotic ribosomal protein eL42 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18502">
        <property type="protein sequence ID" value="KFM18502"/>
        <property type="gene ID" value="AAA799P11_01072"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1034"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070180">
        <property type="term" value="F:large ribosomal subunit rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01476">
        <property type="entry name" value="Ribosomal_L44e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000552">
        <property type="entry name" value="Ribosomal_L44e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10369">
        <property type="entry name" value="PTHR10369"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00935">
        <property type="entry name" value="Ribosomal_L44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="zinc finger region" description="C4-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="27"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="10602" checksum="E219D05987EEC6B6" modified="2014-10-29" version="1">MNIPKVIRKYCAKCKTHTEQKVSIYKAGKRRGSARGERRHAERKHGYGGQKFPKLAKPAKVTKKVTPIMTCTVCKKKYNKLGVRIKKFELVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF1</accession>
    <name>A0A087RYF1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 19">Adenosylcobinamide-GDP ribazoletransferase</fullName>
            <ecNumber evidence="7 19">2.7.8.26</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18 19">Cobalamin synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17 19">Cobalamin-5'-phosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19 20" type="primary">cobS</name>
        <name evidence="20" type="ORF">AAA799P11_01075</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="20 21" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16 19">Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 19">
            <text>adenosylcob(III)inamide-GDP + alpha-ribazole 5'-phosphate = adenosylcob(III)alamin 5'-phosphate + GMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23560"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57918"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="ChEBI" id="CHEBI:60493"/>
            <dbReference type="EC" id="2.7.8.26"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 19">
            <text>adenosylcob(III)inamide-GDP + alpha-ribazole = adenosylcob(III)alamin + GMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16049"/>
            <dbReference type="ChEBI" id="CHEBI:10329"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="EC" id="2.7.8.26"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 19">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5 19">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 7/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="19">Cell membrane</location>
            <topology evidence="19">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="4">Membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6 19">Belongs to the CobS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="20">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.26" evidence="7 19"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18505">
        <property type="protein sequence ID" value="KFM18505"/>
        <property type="gene ID" value="AAA799P11_01075"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1037"/>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051073">
        <property type="term" value="F:adenosylcobinamide-GDP ribazoletransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008818">
        <property type="term" value="F:cobalamin 5'-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00719">
        <property type="entry name" value="CobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003805">
        <property type="entry name" value="CobS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34148">
        <property type="entry name" value="PTHR34148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02654">
        <property type="entry name" value="CobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00317">
        <property type="entry name" value="cobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 19" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 19" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="13 19" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 19 20" id="KW-0808">Transferase</keyword>
    <keyword evidence="12 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="30"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="102"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="174"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00010561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00015850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00025228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00032605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00032853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="KFM18505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="241" mass="25209" checksum="A785E47B6809C65F" modified="2014-10-29" version="1">MLKEIGSVFSFLTIFPSSNATLENIAKYMYVFPIVGIAIGLLVGSFGFGLSFFLDPLLVSLLVVTSIAIVTGIHHADGLADFADGLMVKGTKEKKIKAMKDLSTGSAGIVGLVLYLIGLIITISLTSGSDLFKAILISEILAKFSMVLLASLGNSAASGSNSPFVRLMKDKKKLAAAFIIMLIPVALIGETIGLIMLGVTIALTLFLLGVSTRSFGGITGDVIGATNELTRLASLMVFVSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK4</accession>
    <name>A0A087RYK4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18558">
        <property type="protein sequence ID" value="KFM18558"/>
        <property type="gene ID" value="AAA799P11_01045"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1007"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="118" mass="13089" checksum="2876825080894E8D" modified="2014-10-29" version="1">MADPLKERLEKLRKISESAKRRASLYSDVAKMDDRHTARSLGALQKAPAPGKKLQKIGFLMLWIPEPTGVTCAVGGPMIVAGRYLEKKYNSATIHDIGHQTKNTFSSISDFKSSVMNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ16</accession>
    <name>A0A087RZ16_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleoside diphosphate kinase</fullName>
            <shortName evidence="1">NDK</shortName>
            <shortName evidence="1">NDP kinase</shortName>
            <ecNumber evidence="1">2.7.4.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Nucleoside-2-P kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 4" type="primary">ndk</name>
        <name evidence="4" type="ORF">AAA799P11_01010</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:44640"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a ribonucleoside 5'-diphosphate + ATP = a ribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:18113"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the NDK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.6" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18720">
        <property type="protein sequence ID" value="KFM18720"/>
        <property type="gene ID" value="AAA799P11_01010"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.976"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004550">
        <property type="term" value="F:nucleoside diphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006241">
        <property type="term" value="P:CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006183">
        <property type="term" value="P:GTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006165">
        <property type="term" value="P:nucleoside diphosphate phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006228">
        <property type="term" value="P:UTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.141">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00451">
        <property type="entry name" value="NDP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034907">
        <property type="entry name" value="NDK-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036850">
        <property type="entry name" value="NDK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001564">
        <property type="entry name" value="Nucleoside_diP_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00334">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01243">
        <property type="entry name" value="NUCDPKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00562">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54919">
        <property type="entry name" value="SSF54919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NDK" evidence="3">
        <location>
            <begin position="2"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="active site" description="Pros-phosphohistidine intermediate" evidence="1">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="14683" checksum="2B2E2A7E957A846D" modified="2014-10-29" version="1">MTEKSLFIVKPDAVARNLVGEVISRFERKGFKILKLKMFTFTQEQAENFYGVHKDKPFFGELTSFITSGPVVAAIIEGNNAIATTRIMIGATKSFEAAPGSIRGDFGLGFSENIIHASDSQESFDHESRVAFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ24</accession>
    <name>A0A087RZ24_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01018</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18728">
        <property type="protein sequence ID" value="KFM18728"/>
        <property type="gene ID" value="AAA799P11_01018"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.984"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="45" mass="5318" checksum="65D723C4CF68EA56" modified="2014-10-29" version="1">MISNFFYVIIPLKFMLAQEDSEFIEKLAKWAELIGVNLDRDLEQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ31</accession>
    <name>A0A087RZ31_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GINS complex protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01030</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18735">
        <property type="protein sequence ID" value="KFM18735"/>
        <property type="gene ID" value="AAA799P11_01030"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.991"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2050">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021151">
        <property type="entry name" value="GINS_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038437">
        <property type="entry name" value="GINS_Psf3_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05916">
        <property type="entry name" value="Sld5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sld5" evidence="2">
        <location>
            <begin position="45"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="172" mass="19994" checksum="C2CEEB194168A198" modified="2014-10-29" version="1">MEIDKIEKVHSIGYRLKDAKVTINQDYKFNVAGLKTEGKQGEVNNMPQWVGKILADNNLGTLDSPDMITELKQALSKEKMVGEYQISTLDPHFYIKLKESMKELNRDDFDKVESMMLELFRMRRGKLVKLADSIKLNSDLYNKLTVEEVIFYKTIYENSVEFENQIKGETNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ35</accession>
    <name>A0A087RZ35_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01034</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18739">
        <property type="protein sequence ID" value="KFM18739"/>
        <property type="gene ID" value="AAA799P11_01034"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.995"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8508" checksum="ADE650A8D648E3AB" modified="2014-10-29" version="1">MRAGIYGFLFAMWILILIGGGIVVTILGPIEVTGYGDANWFIASVIKAIIAIILVVIWILILSKMKNWIFKKEIRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ55</accession>
    <name>A0A087RZ55_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF5655 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00968</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18759">
        <property type="protein sequence ID" value="KFM18759"/>
        <property type="gene ID" value="AAA799P11_00968"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.932"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043714">
        <property type="entry name" value="DUF5655"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18899">
        <property type="entry name" value="DUF5655"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5655" evidence="1">
        <location>
            <begin position="14"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="13017" checksum="91DC61CB38863E23" modified="2014-10-29" version="1">MEGMISFGNKRSYDDFKKQIPPQVLPLFDSIREFCFSLGENVVEDVRMHRVVFCKSMTFRWFIDVEPQKDGAVIKIQKNRKEPIEIIQINKSQQISEFGNFIKEAYEQVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ71</accession>
    <name>A0A087RZ71_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00984</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0047 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18775">
        <property type="protein sequence ID" value="KFM18775"/>
        <property type="gene ID" value="AAA799P11_00984"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.950"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001602">
        <property type="entry name" value="UPF0047"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035917">
        <property type="entry name" value="YjbQ-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30615">
        <property type="entry name" value="PTHR30615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01894">
        <property type="entry name" value="UPF0047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004681">
        <property type="entry name" value="UCP004681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111038">
        <property type="entry name" value="SSF111038"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00149">
        <property type="entry name" value="TIGR00149_YjbQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="139" mass="15882" checksum="4BED2AFD10212E6C" modified="2014-10-29" version="1">MNSLTEYLTFNVEARRGFVNITPDIRKLVEKSKVKEGLCLVNAMHITASVFINDNEGGLLHDYEKWLEELAPHAPVDQYRHNDTGEDNADAHLKRQVMGREIVVAITNGELDFGPWEQIFYGEFDGKRPKRVLVKIIGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ80</accession>
    <name>A0A087RZ80_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">12-diacylglycerol 3-glucosyltransferase protein</fullName>
            <ecNumber evidence="3">2.4.1.157</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00993</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.157" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18784">
        <property type="protein sequence ID" value="KFM18784"/>
        <property type="gene ID" value="AAA799P11_00993"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047228">
        <property type="term" value="F:1,2-diacylglycerol 3-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13579">
        <property type="entry name" value="Glyco_trans_4_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="15"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="191"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="381" mass="42863" checksum="B91EDAFCB4AB4BDE" modified="2014-10-29" version="1">MHILLMVFRFAPHSGGSVIVGTEIANNLAKMGHKVTVITPDLELKGKKYSPNLHPNIKIVYVQTPSRSNLKVAARRCKANLEREGIKLGKKEKFDFVLTIFHPFHLVPNAAISCAKKLSIPAIVKIDDAVYDKSTGLKSLQRKIEKMISTRALKNASKILVANKNTEKIMHTFYNVPFEKIEIIPNGVDLKFFKSTKKLPKKIIFSGVMYHHRGLDVLLESLPDVIRKFSDVNVVLLGDGPEMEKLQSIVKEKHLENNVEFRGWIDRNNLPDQISDASIAIGPLKRTTVTENALPIKVLEYMASSLPILAISGTLPDDVLIHEKNGYFVKDSKELGEKICKLLDSPKLTESMGNESLKMVQKFSWEKIVSDIVKSYENIRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ86</accession>
    <name>A0A087RZ86_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00999</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18790">
        <property type="protein sequence ID" value="KFM18790"/>
        <property type="gene ID" value="AAA799P11_00999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="403" mass="47464" checksum="0A99ED03A9329E6E" modified="2014-10-29" version="1">METSKHSAYLVEKNLPKEPWHIFIIWNKSLPKKDQIINDVKNKFELKTIFEMNWSQNLFLDNLKRFYGATLPDPEKKLEDCGNGAFFIVLVQDKNPVYRENGTGLQKKLVNGNVFDAKMTYRKWLGVDFAVHGSNTQQETNHDLSLLFGKSLSEITTNFASQTNQTIKISRDLVGANGWSSLKELFHVLNNSTNYVILRNFEDLIEPFQLKNLKDIDILTDDFWQISYIVNKKLRKEGESGPSSYVEVVGKRIKFDFKTPGDGYYDKAWEEDLLKKRRLFQNEFYILDDENYFYSLLYHMLIHKQKLNEKYLERLCIIAKKLKIDNFYDVKDKSTNLKEFLDKFLQKKNYSYTNTRGYRLTHNELTRLTTNAIKISKKQGIGKLFRAAKDKLYRNNLIKSEKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB2</accession>
    <name>A0A087RZB2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Response regulator MprA protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mprA</name>
        <name evidence="2" type="ORF">AAA799P11_00937</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18816">
        <property type="protein sequence ID" value="KFM18816"/>
        <property type="gene ID" value="AAA799P11_00937"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="1">
        <location>
            <begin position="6"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="128" mass="14133" checksum="522D4CF9A23D49A1" modified="2014-10-29" version="1">MQTKSKILIVDDNKSITKMMTKLLTHEGYDCTFCNESTNAIPLMTGTKFDFVLLDLAMPGKSGVEIVDELHQTGQIKNQKIIVLTASSTLQSSFADLKQKGVLTTLKKPIDIDTLLEIISQSPYPRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB3</accession>
    <name>A0A087RZB3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sensory-regulatory protein RpfC</fullName>
            <ecNumber evidence="5">2.7.13.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpfC</name>
        <name evidence="5" type="ORF">AAA799P11_00938</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18817">
        <property type="protein sequence ID" value="KFM18817"/>
        <property type="gene ID" value="AAA799P11_00938"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="235"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="4">
        <location>
            <begin position="292"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="313"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="522" mass="59889" checksum="D80D76E32FD5269A" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI3</accession>
    <name>A0A087RZI3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00918</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18887">
        <property type="protein sequence ID" value="KFM18887"/>
        <property type="gene ID" value="AAA799P11_00918"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.881"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="50"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="12909" checksum="F2CE10955470758D" modified="2014-10-29" version="1">MEKVGAGNIIYELRKKIQQAQAELAELGEPVSDIPELVETANLIRSNEYLQKANLKQNELLATYEKYSEALEELLSTVFEIQNDLKEIVKEQSSLISKPKRTSTKRKTKNTKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL9</accession>
    <name>A0A087RZL9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydroxyacylglutathione hydrolase protein</fullName>
            <ecNumber evidence="2">3.1.2.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gloB</name>
        <name evidence="2" type="ORF">AAA799P11_00864</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.6" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18923">
        <property type="protein sequence ID" value="KFM18923"/>
        <property type="gene ID" value="AAA799P11_00864"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.830"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004416">
        <property type="term" value="F:hydroxyacylglutathione hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050313">
        <property type="term" value="F:sulfur dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07724">
        <property type="entry name" value="POD-like_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044528">
        <property type="entry name" value="POD-like_MBL-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="12"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="202" mass="22728" checksum="415ACBD2D2173B0A" modified="2014-10-29" version="1">MIVHQIQVGNMQNFSYIVEDEDTSESIVIDPSWDLIELEMVIKENSLKIKYIVNTHHHFDHTLGNEAMVESTKASIIQHENSELKHDIAVKDGDVIEFGNSKLKVLHTPGHSKDSICLIGDGKIFSGDTLFVGNCGRIDLPGGSAKELYHSLFDVLYSLDDNLILYPGHNYGHKETSTIGQEKITNMVLQKRTEQQFLDMMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM6</accession>
    <name>A0A087RZM6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">1-deoxy-D-xylulose-5-phosphate synthase protein</fullName>
            <ecNumber evidence="2">2.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dxs</name>
        <name evidence="2" type="ORF">AAA799P11_00871</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18930">
        <property type="protein sequence ID" value="KFM18930"/>
        <property type="gene ID" value="AAA799P11_00871"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.838"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004802">
        <property type="term" value="F:transketolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006082">
        <property type="term" value="P:organic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901576">
        <property type="term" value="P:organic substance biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044272">
        <property type="term" value="P:sulfur compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Transket_pyr" evidence="1">
        <location>
            <begin position="2"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="319" mass="34446" checksum="FB0ED35C41511B3E" modified="2014-10-29" version="1">MTDMRSEYAKSLIQLGKENPNIVVLGADTTDSLKTSGFGKEFPNRFFNVGIAEANLVTTSAGLAVSGKIPFASTYAIFLPGRAVDQIRNNVAYPSPPGKKGLNVKFVVSHGGLSVGPDGGSHQQIEDIAIMRVIPNFRVFIPADTIAVSKLTSLMANEYGPFYMRMARSKTPLVHSGSQNFETGKGITLRDGSDCTIAACGITVRMALEAAEILQQDGISCRVLDMFSIKPIDHEILEKAARETGCIVTTEEHNIMGGMGSAVAESVSESYSVPIKRIGAQDMFGESARDKEIPLLLEKHGITSFNMVKQVKEIRSKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM7</accession>
    <name>A0A087RZM7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Probable transaldolase</fullName>
            <ecNumber evidence="9">2.2.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">tal</name>
        <name evidence="10" type="ORF">AAA799P11_00872</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate = beta-D-fructose 6-phosphate + D-erythrose 4-phosphate</text>
            <dbReference type="Rhea" id="RHEA:17053"/>
            <dbReference type="ChEBI" id="CHEBI:16897"/>
            <dbReference type="ChEBI" id="CHEBI:57483"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="2.2.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the transaldolase family. Type 3B subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.2" evidence="9"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18931">
        <property type="protein sequence ID" value="KFM18931"/>
        <property type="gene ID" value="AAA799P11_00872"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.839"/>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016832">
        <property type="term" value="F:aldehyde-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004801">
        <property type="term" value="F:transaldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00956">
        <property type="entry name" value="Transaldolase_FSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00494">
        <property type="entry name" value="Transaldolase_3b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001585">
        <property type="entry name" value="TAL/FSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022999">
        <property type="entry name" value="Transaldolase_3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004731">
        <property type="entry name" value="Transaldolase_3B/F6P_aldolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018225">
        <property type="entry name" value="Transaldolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033919">
        <property type="entry name" value="TSA/FSA_arc/bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10683">
        <property type="entry name" value="PTHR10683"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00923">
        <property type="entry name" value="TAL_FSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00875">
        <property type="entry name" value="fsa_talC_mipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01054">
        <property type="entry name" value="TRANSALDOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00958">
        <property type="entry name" value="TRANSALDOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0570">Pentose shunt</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0704">Schiff base</keyword>
    <keyword evidence="6 9 10" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="222" mass="24400" checksum="F37F90CB229378FF" modified="2014-10-29" version="1">MKIFLDTANLESIKKFNDMGLLDGITTNPSLMSKEKGNPKDAMEEITKIIKGDVSLEVVSTEFSGMVEEGKRLREYGENVVVKVPMTPDGLKACKSLSSEGIPVNVTLVFSPNQALLAAKSGAKYVSPFIGRLDDIGQDGMNLIQDIKDIFKNYPHLKTEILVASVRHPMHVVEAAKIGADVVTLPPGVLDKMLQHPLTKIGLENFLKDWEKVKTENPDVKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN7</accession>
    <name>A0A087RZN7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acylpyruvate hydrolase protein</fullName>
            <ecNumber evidence="2">3.7.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00887</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.7.1.5" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18941">
        <property type="protein sequence ID" value="KFM18941"/>
        <property type="gene ID" value="AAA799P11_00887"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.849"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047621">
        <property type="term" value="F:acylpyruvate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="79"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="289" mass="32383" checksum="5D0F56FE483AA44F" modified="2014-10-29" version="1">MKIARLVHENYETYGFVKGDKVATKDEITYLTGVPIPHNVKDFLFDGWFDEIKNKIQDLHYEENLSKFKLLAPIPNPNKIICLAFNYVDHAKEQGLTAPEDPAIVIKPRTALNGNNSHIECPDFVTQLDYEVELALIIGKDCKNISHDEAKNVIFGYMVFNDVSARDIQFKDKQFTRGKSFDSFAPCGPWITTADEIQDAQNLKLTTKINGELRQNSSTSNMFIKIPEIISKISKVMTLEKGDIISTGTPAGVMLNKPNAAFLKDGDKVEMEIEGLGILNNTVKVVKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZP1</accession>
    <name>A0A087RZP1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Isopentenyl phosphate kinase</fullName>
            <ecNumber evidence="3">2.7.4.26</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00891</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + isopentenyl phosphate = ADP + isopentenyl diphosphate</text>
            <dbReference type="Rhea" id="RHEA:33963"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:65078"/>
            <dbReference type="ChEBI" id="CHEBI:128769"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.26"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the isopentenyl phosphate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.26" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18945">
        <property type="protein sequence ID" value="KFM18945"/>
        <property type="gene ID" value="AAA799P11_00891"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.853"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102043">
        <property type="term" value="F:isopentenyl phosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024192">
        <property type="entry name" value="Fosfomycin_R_FomA-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43654:SF1">
        <property type="entry name" value="PTHR43654:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="6">
        <location>
            <begin position="12"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00017267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="144" mass="16141" checksum="5B6F2A64FF69B942" modified="2014-10-29" version="1">MTGNKPIPKKVKEIEKISKSGLIPVTFGDALWYGQNKTFILSGDKIMTHLAKILKPKLCIFALNEDGVYSNLKSKKLIHELKGENPSISENKMDVTGGMTRKIEEATKISKMGMNVFFVNGNKPERIVKAVKNRKFEGTLFRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU5</accession>
    <name>A0A087RZU5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative disulfide bond formation protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00851</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18999">
        <property type="protein sequence ID" value="KFM18999"/>
        <property type="gene ID" value="AAA799P11_00851"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.818"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="22"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="220" mass="24114" checksum="7CB9D69548FC8E05" modified="2014-10-29" version="1">MNKKGMIIGVVAIAIIAGVAASLSSTPTETVNLDMTRTHGTISTAMGSPILGDPSAPVTIVEFGDYQCHQCYNWFHNTKPAITRDYIDTGKANLVFVDMAFLGRDSGPAAQATYCAEDQGKYWEYHDMLYNAQEDKIDSGWANTERLKAFAFSMGLDMELFESCLDSGKYSKRVQYNTQQARDHGVRGTPGFFIVGPDGQQQIGGAQPFSVFKQVLDPMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L4</accession>
    <name>A0A087S0L4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cobyrinic acid ac-diamide adenosyltransferase protein</fullName>
            <ecNumber evidence="1">2.5.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">btuR</name>
        <name evidence="1" type="ORF">AAA799P11_00786</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.17" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19268">
        <property type="protein sequence ID" value="KFM19268"/>
        <property type="gene ID" value="AAA799P11_00786"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.757"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008817">
        <property type="term" value="F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00561">
        <property type="entry name" value="CobA_CobO_BtuR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003724">
        <property type="entry name" value="CblAdoTrfase_CobA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02572">
        <property type="entry name" value="CobA_CobO_BtuR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015617">
        <property type="entry name" value="Adensltrnsf_CobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00708">
        <property type="entry name" value="cobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="176" mass="19448" checksum="9A1E8B03D789FFDF" modified="2014-10-29" version="1">MSGGLTIVYTGKGKGKTTAALGLALRATGYNKKICMIQFIKGSWHYGEMESTKKLEPRFEMVAVGKGFVGIIDDKSPKGDHEKIAKEAIKISNEKIQSGKYDIVILDEINYAVNLNLISIDDVLQLIKSKPEDIDLVLTGNHAKEKVIEIADLVTEMKEIKHPFQKGIKAKKGIDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M7</accession>
    <name>A0A087S0M7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DNA primase large subunit PriL</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">priB</name>
        <name evidence="7" type="synonym">priL</name>
        <name evidence="8" type="ORF">AAA799P11_00804</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="7">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterodimer of a small subunit (PriS) and a large subunit (PriL).</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the eukaryotic-type primase large subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19281">
        <property type="protein sequence ID" value="KFM19281"/>
        <property type="gene ID" value="AAA799P11_00804"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.771"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003896">
        <property type="term" value="F:DNA primase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06560">
        <property type="entry name" value="PriL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00701">
        <property type="entry name" value="DNA_primase_lrg_arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007238">
        <property type="entry name" value="DNA_primase_lsu_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023642">
        <property type="entry name" value="DNA_primase_lsu_PriL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10537">
        <property type="entry name" value="PTHR10537"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04104">
        <property type="entry name" value="DNA_primase_lrg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 7" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5 7" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2 7" id="KW-0639">Primosome</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="7">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="312"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="321"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="327"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="341" mass="38498" checksum="2E074787C514DA5C" modified="2014-10-29" version="1">MLALGQDEIAKYPFLADAGQYLKDKGFTLEQFGTDPDLKELITKAYERINVAADGKIYKSDLIGDQVSKEAALPREVFSFLLAIVLLKLSGMHTLIKRFALAEARRAEKYLEKDLANISDESKKQLAIRVIDDLFSIQIEKLDDYFVIPISDYLKHSINFHEREWKLINRHVENGQVFLTPHETVRLIRKELGTYINSKIINAKTPTMIPGFEESVNKLVMLSKKFSAFTVTTGEYPPCIKHAIDVLEKGENLPHSGRFMLATFLLSKGQSVQQIAPLFKNAPDYNERVTLYQLNHLAGTSGSGTQYSCPSCEKLKTQSLCFATPECDGIITPLQFGKKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S113</accession>
    <name>A0A087S113_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipoprotein NlpI</fullName>
            <ecNumber evidence="2">2.4.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nlpI</name>
        <name evidence="2" type="ORF">AAA799P11_00741</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19417">
        <property type="protein sequence ID" value="KFM19417"/>
        <property type="gene ID" value="AAA799P11_00741"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.714"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="4"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="38"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="8597" checksum="3EDA0193FD4B2EB4" modified="2014-10-29" version="1">MEKIQELVSQGKALLEDGKFDDALGFFEQALLLNQDDPDLWNYKGIALRSLGRYQEAMDCFNKSLNIDPRDRNSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A2</accession>
    <name>A0A087S1A2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-carboxymuconolactone decarboxylase protein</fullName>
            <ecNumber evidence="2">4.1.1.44</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00707</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.44" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19506">
        <property type="protein sequence ID" value="KFM19506"/>
        <property type="gene ID" value="AAA799P11_00707"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.677"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047575">
        <property type="term" value="F:4-carboxymuconolactone decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin type-1" evidence="1">
        <location>
            <begin position="39"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="17404" checksum="CDB5B582C1B6F62B" modified="2014-10-29" version="1">MKKTNISGTNDKRNVNPNWFTSKTWMKVLSEKIKSEDQDIYHVHFEKGSRTKLHAHNGNQVLIATKGKGSLEVFRKYGTSKNNFKIKKTQKINLNEGDIVHIPAKTLHTHGSVDKKKTFSHIAINILPRKNAEYKTVWWESDFKTKATTII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A4</accession>
    <name>A0A087S1A4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ferredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dnaJ</name>
        <name evidence="9" type="ORF">AAA799P11_00709</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19508">
        <property type="protein sequence ID" value="KFM19508"/>
        <property type="gene ID" value="AAA799P11_00709"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.679"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001080">
        <property type="entry name" value="3Fe4S_ferredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00352">
        <property type="entry name" value="3FE4SFRDOXIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0249">Electron transport</keyword>
    <keyword evidence="3 5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="J" evidence="7">
        <location>
            <begin position="5"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="147"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="59"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU368020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="221" mass="25945" checksum="D6E2AB3C2B43DCE5" modified="2014-10-29" version="1">MNTYQALKVLDIDSNSSQEEIKSAFRKKALEHHPDKNKNKNEDVEFKKITEAYEYLKKNHHQRNDVYHKPQSKPKSNFKRKPWGAPDDEKIPEQDWGKYTKEFEEGDPDFWKEYEKNFWKEYNARVRPDGRNGEYEKAKEPKKQPNLFVDVDKSLCIGCCSCEIIAPDVFQINKERMMNPKSSVIDPKGAGVNKIMDAAMTCPTKAIIVEDIDTKERMYPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A9</accession>
    <name>A0A087S1A9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00714</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19513">
        <property type="protein sequence ID" value="KFM19513"/>
        <property type="gene ID" value="AAA799P11_00714"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.684"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="82" mass="9472" checksum="8739BA776B8441A4" modified="2014-10-29" version="1">MPIENDQECKELIDKLDKGLPPQMIDELISYLEKTKNSEFTMTLIKYLNNQNIQSRNSLLALSSQISMLGEDITEIKKRLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C8</accession>
    <name>A0A087S1C8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative cobalt transporter subunit protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00733</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19532">
        <property type="protein sequence ID" value="KFM19532"/>
        <property type="gene ID" value="AAA799P11_00733"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.706"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012667">
        <property type="entry name" value="CbtB_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09489">
        <property type="entry name" value="CbtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="94" mass="10405" checksum="2412C8C27078F1CA" modified="2014-10-29" version="1">MPKLYKLDKSSNSLSISCFLHVLLSQSKEITISKSRTPVSAIVILAAIFVTGLFVVGYDQGHIFSIALGEQAFEDLYIHELTHDMRHAAGFPCH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I2</accession>
    <name>A0A087S1I2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA primase DnaG</fullName>
            <ecNumber evidence="1">2.7.7.101</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">dnaG</name>
        <name evidence="3" type="ORF">AAA799P11_00575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Forms a ternary complex with MCM helicase and DNA. Component of the archaeal exosome complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the archaeal DnaG primase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.101" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19586">
        <property type="protein sequence ID" value="KFM19586"/>
        <property type="gene ID" value="AAA799P11_00575"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.559"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000178">
        <property type="term" value="C:exosome (RNase complex)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003896">
        <property type="term" value="F:DNA primase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008143">
        <property type="term" value="F:poly(A) binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01029">
        <property type="entry name" value="TOPRIM_primases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00007">
        <property type="entry name" value="DNA_primase_DnaG_arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020607">
        <property type="entry name" value="Primase_DnaG_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034154">
        <property type="entry name" value="TOPRIM_DnaG/twinkle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13662">
        <property type="entry name" value="Toprim_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00493">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="1" id="KW-0271">Exosome</keyword>
    <keyword evidence="1 3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="1" id="KW-0639">Primosome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0804">Transcription</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Toprim" evidence="2">
        <location>
            <begin position="170"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="381" mass="41091" checksum="0D978ACB43B9126C" modified="2014-10-29" version="1">MPQSGIVKYHVKLSYEVDGLVERADIIGAIFGQTEGLLGPEMNLNELQRVSKVGRIEVSARTTANTTAGDALIPMSTDIDTCALIAAGIESIDKVGPFDCKFTLEAIDDVRAAKKDDIVKRAKEIKQKWATKTVSEGESMLNDVHQGDSKKLTTYGPSKLTCSSGLADSNWVILVEGRADVINLLRAGYDNALAIEGAKIDESIKELCNSKDTIVAFLDGDRSGGFILKELKSVVPIDYELRADNDVEVEELTPQRIDEILSPIAEEIKGGKPATPTLQNEDDKPLAEMAAKVFPTLNETLEAVALDSDNNEIFKVPISEVVSKLSTQSGIKYLLLDGIITQRLLEGAKNAGIECVIGHRVAKLSNSDGMTLKTFGDLGVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L3</accession>
    <name>A0A087S1L3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative threonylcarbamoyladenosine tRNA methylthiotransferase protein</fullName>
            <ecNumber evidence="2">4.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00606</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19617">
        <property type="protein sequence ID" value="KFM19617"/>
        <property type="gene ID" value="AAA799P11_00606"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.593"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Elp3" evidence="1">
        <location>
            <begin position="268"/>
            <end position="510"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="574" mass="65157" checksum="4B0746BF2FD83371" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M8</accession>
    <name>A0A087S1M8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">S-methyl-5'-thioadenosine phosphorylase</fullName>
            <ecNumber evidence="3">2.4.2.28</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5'-methylthioadenosine phosphorylase</fullName>
            <shortName evidence="3">MTA phosphorylase</shortName>
            <shortName evidence="3">MTAP</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">mtnP</name>
        <name evidence="5" type="ORF">AAA799P11_00621</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible phosphorylation of S-methyl-5'-thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + S-methyl-5'-thioadenosine = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11852"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="EC" id="2.4.2.28"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; S-methyl-5-thio-alpha-D-ribose 1-phosphate from S-methyl-5'-thioadenosine (phosphorylase route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homohexamer. Dimer of a homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.28" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19632">
        <property type="protein sequence ID" value="KFM19632"/>
        <property type="gene ID" value="AAA799P11_00621"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.607"/>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00873"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017061">
        <property type="term" value="F:S-methyl-5-thioadenosine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd09010">
        <property type="entry name" value="MTAP_SsMTAPII_like_MTIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01963">
        <property type="entry name" value="MTAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010044">
        <property type="entry name" value="MTAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018099">
        <property type="entry name" value="Purine_phosphorylase-2_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42679">
        <property type="entry name" value="PTHR42679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01694">
        <property type="entry name" value="MTAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01240">
        <property type="entry name" value="PNP_MTAP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PNP_UDP_1" evidence="4">
        <location>
            <begin position="7"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="3">
        <location>
            <begin position="55"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="3">
        <location>
            <begin position="88"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="210"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="3">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="3">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="263" mass="29002" checksum="0B5F1C0067EA331E" modified="2014-10-29" version="1">MGKDVEIGIFGGTGIYDSGLLEDAKEVDVDTPYGKPSDTITVGTFKGRKIAFLPRHGKKHTIPPHMINFKANIWAFKELGVTRIIAPSAVGSLKEELEPGHFVLPSQFLDFTKSRDGSFSEDGRVIHISVADPFCPELQSSITQVTDNQNIHIHKDCTYVCIEGPRFSTKAESKFFRSTGADIIGMTLVPECQLAREAQICYASISTVTDYDVWAEKPVTAKEVLETLSKNVEGTKKILTELIEKIPKTRSCSCAKALEEAEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N6</accession>
    <name>A0A087S1N6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA-processing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00629</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19640">
        <property type="protein sequence ID" value="KFM19640"/>
        <property type="gene ID" value="AAA799P11_00629"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.615"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019964">
        <property type="entry name" value="KH_domain_protein_archaea"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039912">
        <property type="entry name" value="PNO1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12826:SF13">
        <property type="entry name" value="PTHR12826:SF13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="SSF54791"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03665">
        <property type="entry name" value="arCOG04150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="KH" evidence="1">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="KH" evidence="1">
        <location>
            <begin position="84"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="190" mass="20875" checksum="CC38C58873643301" modified="2014-10-29" version="1">MSFEKLLRIPNDRIAVLIGKSGNVKSKIEKACHVSLNIDGETGEVVIKSDGDVEKIQPFKAMEIVTAIGRGFSPENAMTLLKGENTLHVIDLREFAGKSNANVERIKGRIIGEGGRARRNMENLSSTHISVYGKTVSIIGDASKLRLAVDAISSISSGSMHGAVYDKLEAANRKEKQEKMKLWEDQDVFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P4</accession>
    <name>A0A087S1P4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific)</fullName>
            <ecNumber evidence="2">2.5.1.89</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Undecaprenyl diphosphate synthase</fullName>
            <shortName evidence="2">UDS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Undecaprenyl pyrophosphate synthase</fullName>
            <shortName evidence="2">UPP synthase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">uppS</name>
        <name evidence="3" type="ORF">AAA799P11_00637</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>geranylgeranyl diphosphate + 7 isopentenyl diphosphate = 7 diphosphate + tri-trans,hepta-cis-undecaprenyl diphosphate</text>
            <dbReference type="Rhea" id="RHEA:27622"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57533"/>
            <dbReference type="ChEBI" id="CHEBI:60388"/>
            <dbReference type="ChEBI" id="CHEBI:128769"/>
            <dbReference type="EC" id="2.5.1.89"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="2">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.89" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19648">
        <property type="protein sequence ID" value="KFM19648"/>
        <property type="gene ID" value="AAA799P11_00637"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.623"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004659">
        <property type="term" value="F:prenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00475">
        <property type="entry name" value="Cis_IPPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01139">
        <property type="entry name" value="ISPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001441">
        <property type="entry name" value="UPP_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018520">
        <property type="entry name" value="UPP_synth-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291">
        <property type="entry name" value="PTHR10291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01255">
        <property type="entry name" value="Prenyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="SSF64005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00055">
        <property type="entry name" value="uppS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01066">
        <property type="entry name" value="UPP_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2 3" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="35"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="79"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="212"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="257" mass="30164" checksum="4B9737C7C245C1C6" modified="2014-10-29" version="1">MILQLSGLYKIYGKRLENEIQSGDIPNHVALILDGNRRWAKRHLTIPKAGHWRGADAVENLLDWCEEFNIKIVTLYALSAENLDRNDEELEHLYELIRMRLEKLYNDPRIHRCKMRVKGIGRIELLPDSIKDILKKLDDATKDYDNHFLNIALAYGGQYELVDAVKKIGEKIKDGKMDVDKITKKEIESNLYTSHLPQSSPDMILRTSGEKRLSGFLMWQSAYSELVFMDIFWPEFRKIDLMRAIRTFQERKRRLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q0</accession>
    <name>A0A087S1Q0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative Fe-trafficking protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00643</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19654">
        <property type="protein sequence ID" value="KFM19654"/>
        <property type="gene ID" value="AAA799P11_00643"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.629"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3880.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007457">
        <property type="entry name" value="Fe_traffick_prot_YggX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036766">
        <property type="entry name" value="Fe_traffick_prot_YggX_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04362">
        <property type="entry name" value="Iron_traffic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111148">
        <property type="entry name" value="SSF111148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="10780" checksum="09EEF17C374EA4F1" modified="2014-10-29" version="1">MTRTCTKCKNAIPDTEQLGPVAEKYPTCNKCWAEWKEYQIMVMNEMKLDMSMPDHRKLLKKHEKIFVGVMSPEGEVIDYTNEDNRKPDEPSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q1</accession>
    <name>A0A087S1Q1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00644</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19655">
        <property type="protein sequence ID" value="KFM19655"/>
        <property type="gene ID" value="AAA799P11_00644"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.630"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="7596" checksum="678B3F69E34F8E86" modified="2014-10-29" version="1">MKIKCPKCKEDAELAPDFSFVKCGSCDLDMSYGEYIKFVAHNEATYSDILGDYAGSTEGQTAGSLDEWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R6</accession>
    <name>A0A087S1R6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00659</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19670">
        <property type="protein sequence ID" value="KFM19670"/>
        <property type="gene ID" value="AAA799P11_00659"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.647"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023486">
        <property type="entry name" value="TFIIB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="TF_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00782">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CYCLIN" evidence="5">
        <location>
            <begin position="123"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="CYCLIN" evidence="5">
        <location>
            <begin position="217"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="306" mass="34210" checksum="68C42351E137C235" modified="2014-10-29" version="1">MVTLAKNSNCLRCGKNSLLTDSVTGEQFCSKCGYVVSEKLNESGPEWRSFQTETGDNPARTGAPSSLLMHDMGLSTVINPINKDSTGRPLSTSMKSTIERLRTWDSRSQSREPVDRNLRQALNELSRMKDKIALSSNVLEKAAYLYRKALEKKLVRGRSISAMIAASLYAACRDTETPRTLKDLSDAANVKRKDIARCYRLLHYELELKMPVVNSIQCISRIASKLELSEKTKRHAVKILQKVQDNKESAGKDPMGLAATALYVSCIKNQENITQRNLAEAANVTEVTIRNRFKGLKKQNLKIDVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S1</accession>
    <name>A0A087S1S1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Proton-sodium-glutamate symport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gltT</name>
        <name evidence="7" type="ORF">AAA799P11_00664</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19675">
        <property type="protein sequence ID" value="KFM19675"/>
        <property type="gene ID" value="AAA799P11_00664"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.653"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PTHR42865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="60"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="97"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="216"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="248"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="339"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="380"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="439" mass="46982" checksum="D28FAC966CC33736" modified="2014-10-29" version="1">MEIRSFTQPIPQIKYLVKNKLWAQVLVALFVGLLVGLALGPETGWVEKETAEVITDWLSIPANLFLKIIQMIIVPLIFASIIRGLTSSGSIEQLQKIGLGAAVYFVITTAIALTIGITIATTIEPGNFIDSDLIRESFGIEDAEPVESYDLSIHDIPQSIVGLVPSNPLSSFMSGEMLSIIIFALIVGVAMITLPPKSSRPILDLLESIQDFTMKVVSWAMRLAPFAAFGLMAGIVSKIGLSALTGLGAYMATVVAGLFVMLIVYIIIIKFFAKRPLSSTLATIKEPQLLAFSTSSSAATMPVSIKTAEEKLKVKPKVSQFIIPLGATINMDGTAMYQIIAVFFLAQLFDINLSFTTIILIALTSLAASIGAPSAPGTGIVILSTILIAAGVPAVGVVLLLGVDRILDMTRTMVNVTGDLTACMFFDRRTKIEEPPDTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X7</accession>
    <name>A0A087S1X7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00471</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19731">
        <property type="protein sequence ID" value="KFM19731"/>
        <property type="gene ID" value="AAA799P11_00471"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.454"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="11928" checksum="1AAC08F192F8ED6D" modified="2014-10-29" version="1">MSLDEIRQKVIFHNSVDVWIFACGEKNKDWTNPEDYKQFIAHLLKNNLNLKAFNLCTHEAGATEEEKTKFTEILAETKATDPNSQTYTIKLNDSAIDIIRSYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z3</accession>
    <name>A0A087S1Z3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00492</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19747">
        <property type="protein sequence ID" value="KFM19747"/>
        <property type="gene ID" value="AAA799P11_00492"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.470"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="97" mass="11168" checksum="EE2689EA14A78F3A" modified="2014-10-29" version="1">MIQREELEQILNFVSNRWSEVDKEKDSKVMENLPSDFWMNSVGGKTANKGFWVTTLMYTENEADAAAFKEVLLRWQAKGQEGDKDKGPDLIQIGKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z9</accession>
    <name>A0A087S1Z9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Proteasome subunit beta</fullName>
            <ecNumber evidence="9">3.4.25.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">20S proteasome beta subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Proteasome core protein PsmB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">psmB1</name>
        <name evidence="9" type="synonym">psmB</name>
        <name evidence="10" type="ORF">AAA799P11_00498</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>Cleavage of peptide bonds with very broad specificity.</text>
            <dbReference type="EC" id="3.4.25.1"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="9">The formation of the proteasomal ATPase PAN-20S proteasome complex, via the docking of the C-termini of PAN into the intersubunit pockets in the alpha-rings, triggers opening of the gate for substrate entry. Interconversion between the open-gate and close-gate conformations leads to a dynamic regulation of the 20S proteasome proteolysis activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">The 20S proteasome core is composed of 14 alpha and 14 beta subunits that assemble into four stacked heptameric rings, resulting in a barrel-shaped structure. The two inner rings, each composed of seven catalytic beta subunits, are sandwiched by two outer rings, each composed of seven alpha subunits. The catalytic chamber with the active sites is on the inside of the barrel. Has a gated structure, the ends of the cylinder being occluded by the N-termini of the alpha-subunits. Is capped at one or both ends by the proteasome regulatory ATPase, PAN.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the peptidase T1B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="9"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19753">
        <property type="protein sequence ID" value="KFM19753"/>
        <property type="gene ID" value="AAA799P11_00498"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.476"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019774">
        <property type="term" value="C:proteasome core complex, beta-subunit complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004298">
        <property type="term" value="F:threonine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010498">
        <property type="term" value="P:proteasomal protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02113_A">
        <property type="entry name" value="Proteasome_B_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019983">
        <property type="entry name" value="Pept_T1A_Psome_bsu_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000243">
        <property type="entry name" value="Pept_T1A_subB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016050">
        <property type="entry name" value="Proteasome_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00141">
        <property type="entry name" value="PROTEASOME"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00854">
        <property type="entry name" value="PROTEASOME_BETA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 9" id="KW-0645">Protease</keyword>
    <keyword evidence="7 9 10" id="KW-0647">Proteasome</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0888">Threonine protease</keyword>
    <keyword evidence="8 9" id="KW-0865">Zymogen</keyword>
    <feature type="propeptide" id="PRO_5005006524" description="Removed in mature form; by autocatalysis" evidence="9">
        <location>
            <begin position="1"/>
            <end position="7"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5023460209" description="Proteasome subunit beta" evidence="9">
        <location>
            <begin position="8"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="198" mass="21344" checksum="26D6DE620D6B4D32" modified="2014-10-29" version="1">MSMYMPGATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVDKPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGLDVLVITKDGTEEFTEEIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S211</accession>
    <name>A0A087S211_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19765">
        <property type="protein sequence ID" value="KFM19765"/>
        <property type="gene ID" value="AAA799P11_00510"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="97" mass="10508" checksum="27486B8FA0C9146B" modified="2014-10-29" version="1">MAQTKAQRSAAAKKAARTRKRNAKLKAEAAAKAAVKRKRTAAAKKRAVASAPKKRSVSKRSTSKRKTVSKKAPTKRKASKKAVPKRKTAVKSKGNKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S224</accession>
    <name>A0A087S224_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Malate dehydrogenase protein</fullName>
            <ecNumber evidence="7">1.1.1.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mdh</name>
        <name evidence="7" type="ORF">AAA799P11_00523</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the LDH/MDH superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.37" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19778">
        <property type="protein sequence ID" value="KFM19778"/>
        <property type="gene ID" value="AAA799P11_00523"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.505"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004459">
        <property type="term" value="F:L-lactate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030060">
        <property type="term" value="F:L-malate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018177">
        <property type="entry name" value="L-lactate_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00086">
        <property type="entry name" value="LLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00064">
        <property type="entry name" value="L_LDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ldh_1_N" evidence="5">
        <location>
            <begin position="2"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="Ldh_1_C" evidence="6">
        <location>
            <begin position="141"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="300" mass="32784" checksum="F779E9139E0F6B62" modified="2014-10-29" version="1">MISIVGTGRVGASIAFLCVSHGLDDVLLVNRTKEKAIGESLDVASAIPADSKFSVRGTDNYSELVGSDIVIIAASVGVYTKDRSENIDLQVKMIKGIAEKTKQYCPSAIVLIVSNPLDVLTYYFQKTSEFPRFKVIGIASSLDTSRFRYYISETLSVPQSSISNALVLGEHGDTMVPIFSGVSVGGNPLFSMIDSRDAITENVRNYWRTLRNYKSRSQFGIAKNTFDVVNAILNKKEITIPASVVLDGEYGEQNIAMGVPVKINQNGVSEIQQIKLDDTESSSLKKSSEKIRNDINSVHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S225</accession>
    <name>A0A087S225_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein</fullName>
            <ecNumber evidence="2">3.1.1.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00524</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.61" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19779">
        <property type="protein sequence ID" value="KFM19779"/>
        <property type="gene ID" value="AAA799P11_00524"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.506"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008984">
        <property type="term" value="F:protein-glutamate methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006276">
        <property type="entry name" value="UspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="1"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="143" mass="15893" checksum="A11B81E3A06BC551" modified="2014-10-29" version="1">MFKNILIPFDLSAPSTRAFKVAVDVAKKYDSKLTLLTCLEGDAWHHKYYDSRADSELIKKQKKVSQKHIEKLEVIAEKNNVSVKSHILKSKSVVNDIVVFAKSRKHDLIVIGSHGRTGLDKVLLGSVANGVSQKAKCPVLIVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S234</accession>
    <name>A0A087S234_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00533</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19788">
        <property type="protein sequence ID" value="KFM19788"/>
        <property type="gene ID" value="AAA799P11_00533"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="21" mass="2491" checksum="8B37AA11E34402A4" modified="2014-10-29" version="1" fragment="single">MSEDEFENCLKDAKHMSELAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S288</accession>
    <name>A0A087S288_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable porphobilinogen deaminase</fullName>
            <ecNumber evidence="3">2.5.1.61</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">hemC</name>
        <name evidence="10" type="ORF">AAA799P11_00371</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>dipyrromethane</name>
            <dbReference type="ChEBI" id="CHEBI:60342"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HMBS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.61" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19842">
        <property type="protein sequence ID" value="KFM19842"/>
        <property type="gene ID" value="AAA799P11_00371"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.360"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004418">
        <property type="term" value="F:hydroxymethylbilane synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006779">
        <property type="term" value="P:porphyrin-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000860">
        <property type="entry name" value="HemC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022417">
        <property type="entry name" value="Porphobilin_deaminase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022418">
        <property type="entry name" value="Porphobilinogen_deaminase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036803">
        <property type="entry name" value="Porphobilinogen_deaminase_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11557">
        <property type="entry name" value="PTHR11557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01379">
        <property type="entry name" value="Porphobil_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03900">
        <property type="entry name" value="Porphobil_deamC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001438">
        <property type="entry name" value="4pyrrol_synth_OHMeBilane_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00151">
        <property type="entry name" value="PORPHBDMNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54782">
        <property type="entry name" value="SSF54782"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00212">
        <property type="entry name" value="hemC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Porphobil_deam" evidence="8">
        <location>
            <begin position="11"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="Porphobil_deamC" evidence="9">
        <location>
            <begin position="193"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="240"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="240"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="283" mass="31033" checksum="5A8E8783667B205C" modified="2014-10-29" version="1">MNYCNRCFFVQTASNDDSRPLFTIDQKGIFEKEIDRAVAQKEVDFAVHSLKDVPSELDENLTLACIPKRETVNDVFISPDGSSLDSIKPGSVIGTSSLRRAVQVSRKRPDVTVKPIRGNIETRIKKASGENYDAIVLAKAGITRLGVDVKYTKLSTDDFSPSPGQGAIAIVARADDSKTIEMLKRIEDSDSRLEIEAERALSDFVDSGCRFPVGAYAKSNGTEMTLTVTAFSVDGKQSLHVSKTGDKNNPKSLGQSAGEELQEKGVNDLALNWREKVEEWNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S289</accession>
    <name>A0A087S289_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Siroheme synthase protein</fullName>
            <ecNumber evidence="6">2.1.1.107</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cysG</name>
        <name evidence="6" type="ORF">AAA799P11_00372</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.107" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19843">
        <property type="protein sequence ID" value="KFM19843"/>
        <property type="gene ID" value="AAA799P11_00372"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.361"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004851">
        <property type="term" value="F:uroporphyrin-III C-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019354">
        <property type="term" value="P:siroheme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11642">
        <property type="entry name" value="SUMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006366">
        <property type="entry name" value="CobA/CysG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01469">
        <property type="entry name" value="cobA_cysG_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00839">
        <property type="entry name" value="SUMT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00840">
        <property type="entry name" value="SUMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="5">
        <location>
            <begin position="4"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="246" mass="26828" checksum="A55FA0D9165953EB" modified="2014-10-29" version="1">MTGKVYLVGAGPGDSKLITLRAVELLQKADVVLYDRLVSKKIISMVPKKTEKVYVGRAVGDDTTHQNTTNDLMVKYAKSKKNVVRLKGGDPIIFGRGGEEAEFLKENKVKYEIVPGITSGIGSATYAGIPLTHRKHASSVVFVTGHEDPEKKQEIVKWKRLAKSVDTIVIMMGLSRINIICKQLIAGGLDKKTPVAVIQNGTTPKQKMIKGNVTNIAKKVKENKITPPANIIIGNVVDLSETIGWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S292</accession>
    <name>A0A087S292_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">FeS cluster assembly protein SufB</fullName>
            <ecNumber evidence="3">2.1.2.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sufB</name>
        <name evidence="3" type="ORF">AAA799P11_00375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0051 (ycf24) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.2" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19846">
        <property type="protein sequence ID" value="KFM19846"/>
        <property type="gene ID" value="AAA799P11_00375"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.364"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004644">
        <property type="term" value="F:phosphoribosylglycinamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010231">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01980">
        <property type="entry name" value="sufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SufBD_N" evidence="2">
        <location>
            <begin position="133"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="466" mass="52598" checksum="988495B349B74E14" modified="2014-10-29" version="1">MATENLDMDYSKYDFKDSTEMYVHLSKKGLTKETVIGISKMKDEPQWMLDFRLRSYEIFMKKPMPTWGGDLSVIDFQNIYYYAKASEKTEKNWDDVPEDVKNTFDKLGIPEAEKKFLAGVGAQYESEVVYHNLREDLQKQGVLFLDTDSALKEHPEIFKKYFGKVIPPEDNKFAALNSAVWSGGSFIYVPPGVKVDMPLQAYFRINAENIGQFERTLIVVDEGADVHYIEGCTAPVYSSESLHSAVVELVAHKDAHLRYTTIQNWSNDVYNLVTKRAYAYEGATVEWIDGNIGSKLTMKYPGVYLMGERAYGETLSIAFAGKGQHQDTGAKMVHLAPNTTSKITSKSVSRLDGRSTYRGLLNVAKGATNVKSTVRCDALLLDDTSKTDTYPYMEINQEDATITHEATVGKIGDEQIFYLMSRGFSEEEALSLIVNGFMEPFTKELPMEYAVELNRLIKLEMDDSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A8</accession>
    <name>A0A087S2A8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 13">Glutamyl-tRNA reductase</fullName>
            <shortName evidence="8">GluTR</shortName>
            <ecNumber evidence="4 8 13">1.2.1.70</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 17" type="primary">hemA</name>
        <name evidence="17" type="ORF">AAA799P11_00396</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 13">
            <text>(S)-4-amino-5-oxopentanoate + NADP(+) + tRNA(Glu) = H(+) + L-glutamyl-tRNA(Glu) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:12344"/>
            <dbReference type="Rhea" id="RHEA-COMP:9663"/>
            <dbReference type="Rhea" id="RHEA-COMP:9680"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57501"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="EC" id="1.2.1.70"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8 13">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from L-glutamyl-tRNA(Glu): step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="8">During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 13">Belongs to the glutamyl-tRNA reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.70" evidence="4 8 13"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19862">
        <property type="protein sequence ID" value="KFM19862"/>
        <property type="gene ID" value="AAA799P11_00396"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.381"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008883">
        <property type="term" value="F:glutamyl-tRNA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00087">
        <property type="entry name" value="Glu_tRNA_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000343">
        <property type="entry name" value="4pyrrol_synth_GluRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015896">
        <property type="entry name" value="4pyrrol_synth_GluRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015895">
        <property type="entry name" value="4pyrrol_synth_GluRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018214">
        <property type="entry name" value="GluRdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036453">
        <property type="entry name" value="GluRdtase_dimer_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036343">
        <property type="entry name" value="GluRdtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00745">
        <property type="entry name" value="GlutR_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05201">
        <property type="entry name" value="GlutR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000445">
        <property type="entry name" value="4pyrrol_synth_GluRdtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69075">
        <property type="entry name" value="SSF69075"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69742">
        <property type="entry name" value="SSF69742"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01035">
        <property type="entry name" value="hemA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00747">
        <property type="entry name" value="GLUTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 11" id="KW-0521">NADP</keyword>
    <keyword evidence="6 8 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7 8 13" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GlutR_N" evidence="16">
        <location>
            <begin position="10"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="Shikimate_DH" evidence="15">
        <location>
            <begin position="169"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="GlutR_dimer" evidence="14">
        <location>
            <begin position="317"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="49"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="112"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8 9">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 11">
        <location>
            <begin position="187"/>
            <end position="192"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for activity" evidence="8 12">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000445-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000445-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000445-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000445-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF05201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="KFM19862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="421" mass="47386" checksum="C69ECA0EB5197691" modified="2014-10-29" version="1">MNQNIINARVTFRNSPIHILEQFTIKDIEDAYEQFKKHSGLDECVIIQTCNRIELFGKSNNQEVDKIKKTWASLAGLEEQVFDENMEFEENQNALHHLLKLTSGLDSMVLGEEQILGQIKNSITSARERKASGQHLNTLFDKAIRIGTRIRNSSGIGKGGISVGSMAVKLAEENIDELKTKKTLLIGTGEVSTLVAKSLQRRGYAFDVTSRTLSRSKTFCETMGGNPVKFEEVLSGFDNYDVIFVATTAPYFLVTYERITEAMKDKNKGMMILDLSNPRTVDEKVATIGGIKLMNLDQIAEMVEKNMNARLNKVKTVENIINEEVSVLEASMKRLEAEPLVKDVFKNIESLRAKELQKALQMLDEKDEKRIKIIDELTKAVVESIVSTPMNNIRKASEQGNPEVVDLASKLFDYKKQEQAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B3</accession>
    <name>A0A087S2B3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ferrochelatase protein</fullName>
            <ecNumber evidence="4">4.99.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00401</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.99.1.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19867">
        <property type="protein sequence ID" value="KFM19867"/>
        <property type="gene ID" value="AAA799P11_00401"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.386"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004325">
        <property type="term" value="F:ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010644">
        <property type="entry name" value="ChdC/CLD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36843">
        <property type="entry name" value="PTHR36843"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06778">
        <property type="entry name" value="Chlor_dismutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0349">Heme</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="225" mass="26504" checksum="9255BEB877E12186" modified="2014-10-29" version="1">MSESNEQYYFNFSFFKVDPKWRWMADLAKEESAKEVENILKNSGIRYRAYSNLGLRDDADFLLWFVGNSLEEIQKAIEKLYKTVFGKYIIPSRTYLSCSRPSIYVKGQGKEHGFITGMEPKKHVIVYPFTKTREWYLLPQEKRQEIMDEHIEVSKKYPQVILNTTYSFGIHDEDFMLAFEVDNVRDFQDLIMDLRETQVSSYVKNDIPMIVCIKKDIVPLISSLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C0</accession>
    <name>A0A087S2C0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Segregation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">scpB</name>
        <name evidence="4" type="ORF">AAA799P11_00408</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19874">
        <property type="protein sequence ID" value="KFM19874"/>
        <property type="gene ID" value="AAA799P11_00408"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.393"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051304">
        <property type="term" value="P:chromosome separation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005234">
        <property type="entry name" value="ScpB_csome_segregation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34298">
        <property type="entry name" value="PTHR34298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04079">
        <property type="entry name" value="SMC_ScpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="192" mass="21664" checksum="93DDDC59F0D624B3" modified="2014-10-29" version="1">MAKIEDINVATARVEAALYSAGRPLRIEDIIRASGTESRTKTLDILQNIMKKTKSAFKALEVVILPDGSYVMQLKPEYSATVKRYASKPVLPNATLKTLSYIAYQQPISSKQLVEVRGSGVYAHLKELRQLDYITHQNVGRIKIYTTTEKFQKYFGIQGDVEDLKQRLFSKVRKTASTRHTNPISQIATEVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C2</accession>
    <name>A0A087S2C2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">NAD-dependent alcohol dehydrogenase protein</fullName>
            <ecNumber evidence="5">1.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00410</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19876">
        <property type="protein sequence ID" value="KFM19876"/>
        <property type="gene ID" value="AAA799P11_00410"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.395"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="4">
        <location>
            <begin position="8"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="350" mass="37064" checksum="C9DA2CC788492A27" modified="2014-10-29" version="1">MKSAKIPGPNEPLTISESENPKPSGTQVLLKVKSEGVCHSDLHLWEGGYDLGDGQFLKVTDRGVKYPVTPGHEIVGTIEQVGENVSNVSVGDDVLVFPWMGCGECPACKVGNENLCDAPKSMGLFQNGGYADYVLVPNSKYLAKLDGVDPDSATSLACSGLTAYTAIKKANQNSPEFIVIVGAGGLGLMGVQIASEITNAKIICVDLDDAKLETAKEMGAHFTVNSKDPDTVQKIMSICNDKGADSVVDFVNAPPTVKTGLAVLRKRGNLVLVGLFGGSLELSLVTIPLKSITIQGAYTGNYNDMVELLALARKGTINPVISKRYSLDEANSALQDLKDRKILGRAVINP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C4</accession>
    <name>A0A087S2C4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulatory protein QseB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">qseB</name>
        <name evidence="2" type="ORF">AAA799P11_00412</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19878">
        <property type="protein sequence ID" value="KFM19878"/>
        <property type="gene ID" value="AAA799P11_00412"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.397"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="1">
        <location>
            <begin position="77"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="204" mass="22626" checksum="B15528F5D7C67FCA" modified="2014-10-29" version="1">MLAAECKKQHGKDSENEIAEAGNLFLKYSNRKDADNVKGALLCASKCFLSLGDFDKARDTYQQAKTMFTESPQVTRPIVIIDDSKAMALKLQTYVEKLGYSDIRVFENGKTGVKGCKNLFSEGKHPILLLDMGLPDLEGDVVAEKLLKEKLDLQIVVITADEKTTERVNKTLSSGVSAFIQKPFTLDEVKKAIDVAESEYDLLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M2</accession>
    <name>A0A087S2M2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19976">
        <property type="protein sequence ID" value="KFM19976"/>
        <property type="gene ID" value="AAA799P11_00280"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.273"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="131" mass="15544" checksum="EFDEBDDDDDE38286" modified="2014-10-29" version="1">MVEPNFSWIYLIIFLAIPLARIIPRIIAKKRQGSRNYSRQENQYQENMEWNPKQESVKQQTKDMQVLGIMHQGANTFEKIQRSTKIDSKELDSILQQLEKRDLIKVIQKQGMFGPKIELYSTDKGFKEYYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P1</accession>
    <name>A0A087S2P1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Resolvase Holliday junction-type protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00299</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19995">
        <property type="protein sequence ID" value="KFM19995"/>
        <property type="gene ID" value="AAA799P11_00299"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.293"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002732">
        <property type="entry name" value="Hjc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01870">
        <property type="entry name" value="Hjc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="184" mass="21653" checksum="5DEF1A474BADBFFE" modified="2014-10-29" version="1">MRTKTLTISKESRITKNKINNQRAAKTRRQRGYQWEDTLVKRFNTSPNWKAFRLGSPSIALPDVLAVNTENSTIFTIEAKSGTSTSLPVPFDQIERCLEWVKTFDIYKKRHVLLAFKFLSKKRVGVCKYENRELREFYKIWDETLDITDCVCTYEGKIYAKINGSRKEIHLKECSMPFKTKQRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R2</accession>
    <name>A0A087S2R2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Integrase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00321</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20016">
        <property type="protein sequence ID" value="KFM20016"/>
        <property type="gene ID" value="AAA799P11_00321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="123"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="297"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="380" mass="44922" checksum="0DE7FA47D14151AB" modified="2014-10-29" version="1">MVLRQLARNKTTFMEKIASKDQSTKESYRYVIENFENYCMEKTGNANYVLELKESSTEEIFDFLQAWINHNSRLSASTTRLYFSKLKKYLYHMGIKLHPQDIKEELSFKHSVQEDLYGLKLEDIQNIVKSLRYKHKVQFICQASSLMRISELIQLRKKHLISNGENIIVKIPAQIAKFKKGRTTFFSKEASKLLRPILREKEDNDLIFGSSENKVNSKLNSEQILRKALIRIGLDMKYETTNRFMINTHSFRAYGITRLSRHDPNFAKKIAGQKGYLLQYDRMTDEEKLELYQKFEIDLIIDNNTKLKKEKQILESELETTENLKARIKALEEEKEESKESKALYKQEMELMSKKKHITIEDLQEQMQEMAKAIKELKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z0</accession>
    <name>A0A087S2Z0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase protein</fullName>
            <ecNumber evidence="4">4.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00165</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.-.-.-" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20094">
        <property type="protein sequence ID" value="KFM20094"/>
        <property type="gene ID" value="AAA799P11_00165"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="2">
        <location>
            <begin position="11"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="Radical SAM core" evidence="3">
        <location>
            <begin position="197"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="702" mass="80917" checksum="5782CD0C2F648E58" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S300</accession>
    <name>A0A087S300_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">1-deoxypentalenic acid 11-beta-hydroxylase protein</fullName>
            <ecNumber evidence="1">1.14.11.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pntH</name>
        <name evidence="1" type="ORF">AAA799P11_00175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.18" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20104">
        <property type="protein sequence ID" value="KFM20104"/>
        <property type="gene ID" value="AAA799P11_00175"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048244">
        <property type="term" value="F:phytanoyl-CoA dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008775">
        <property type="entry name" value="Phytyl_CoA_dOase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05721">
        <property type="entry name" value="PhyH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="289" mass="33767" checksum="61BDBA952378DCE7" modified="2014-10-29" version="1">MTVESFEHYEKEGFFIVRNLIPIQRIDTLLESVFELYCKYSGKSEDFKDIEKPWNTELFHQKLIELRKNNSESFGAIYDSLKTCLSLNQLVSDDTITDYVSQFLRKKQSEISMSDPVVRLDPPRDTRNIHGWHQDRSYFPQNRDGHNGLVCWAPLNKATIENGAIHVCPESHKEGLLQLKAEEKKDESYTTRFVIPEDIVKKYKDIIVELNPGDAVFFDMLLFHRSGDNISNEIRMSIQCRFHTATAEDYIPFDLINYYSPFIKQKLLENNYDCSDIPDNIRQPPVVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S350</accession>
    <name>A0A087S350_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nascent polypeptide-associated complex protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">nac</name>
        <name evidence="6" type="ORF">AAA799P11_00230</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Contacts the emerging nascent chain on the ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Interacts with the ribosome. Binds ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NAC-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20154">
        <property type="protein sequence ID" value="KFM20154"/>
        <property type="gene ID" value="AAA799P11_00230"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.224"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00814">
        <property type="entry name" value="NAC_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044034">
        <property type="entry name" value="NAC-like_UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038187">
        <property type="entry name" value="NAC_A/B_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005231">
        <property type="entry name" value="NAC_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002715">
        <property type="entry name" value="Nas_poly-pep-assoc_cplx_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19026">
        <property type="entry name" value="HYPK_UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01849">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01407">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="SSF46934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51151">
        <property type="entry name" value="NAC_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="NAC-A/B" evidence="5">
        <location>
            <begin position="3"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="12698" checksum="AFC82190315D332C" modified="2014-10-29" version="1">MMRGGNREMRRMMDKMGLDMNELSNVQEVTIKTDKKEIILSKPSVTEMKAKDNSIFTVTADSYEERELEVPIFSEEDIQLVSQQAGVDEEKAKSALEEAKGDLARAILLLTTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S383</accession>
    <name>A0A087S383_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20187">
        <property type="protein sequence ID" value="KFM20187"/>
        <property type="gene ID" value="AAA799P11_00263"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.257"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="310" mass="36345" checksum="8EB1E3CCEB7CDC02" modified="2014-10-29" version="1">MRIFQSRDNNLVEIHEESFDLERTIQNLVEKNLDSIFPGLEFVETEFQIDDLRPDTIVFDSEKKSFVIIEYKKIENRSLIDQGVSYYQLLHERKENFVLLYNKKMSKTSDVNDINWDETRVIFISPEYTKYQKRASNFQGLPIELYEIKKYQDNMITLNRIGDSQIQSPDSSKSTKTRTTLSEYIEEDYLAGKYHNQYPTEETKKLWNQLKEAIENTFEDAEFRQKKIYGGYYLRDGGSSVCTLEALKTRIVLNYSTSDMTLLETSEFVEDVSNVGHHGIGNFRSSIESSEDVAKAIPFIQKIYHSKKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G1</accession>
    <name>A0A087S3G1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative periplasmic serine endoprotease DegP protein</fullName>
            <ecNumber evidence="2">3.4.21.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mucD</name>
        <name evidence="2" type="ORF">AAA799P11_00012</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20265">
        <property type="protein sequence ID" value="KFM20265"/>
        <property type="gene ID" value="AAA799P11_00012"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.12"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PDZ" evidence="1">
        <location>
            <begin position="269"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="381" mass="40299" checksum="4214B607100ED2C4" modified="2014-10-29" version="1">MNKLKISLRGMSIVSAVVVITAISSMSFVSGTMDEKIETQPSKILDSVVGDKSTVNSLEDLSLTQIFEQTENGIVSIAVTKSQLMQSSGVGSGFVYDGMGNIITNSHVVENAKRIIVTFIDGRSYNAEMVGSDSYSDLAVITIDVDESILNPLTLGDSDSLKVGEDVAAIGNPYGLSGSMTAGIVSQIGRVIPAQNSGFSIPDVIQTDAAINPGNSGGPLLDMKGDVIGVTTAIYSRDGDFSGVGFAIPSNTVSKIVPFLIKDGTYKHPWIGITSTNITPDLSDILELEEATGIMIMNVVKDGPANKASLKGSSEIVEKHGIEFTVGGDIILAIDDTKVRKVDDLISHLQKEKMVGDVTTLTILRDGNISTVDILLEKRPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I4</accession>
    <name>A0A087S3I4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20288">
        <property type="protein sequence ID" value="KFM20288"/>
        <property type="gene ID" value="AAA799P11_00035"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.35"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="15559" checksum="B79B0BF0491EB09F" modified="2014-10-29" version="1">MIAGYFDPDYGDIYPKENSEQIISSMLKNHDKISRGMMMVPLVKFGLFDRDLDTSLSDVRENVMRVNVHLEKWNDVLSEINCKFHSVHISHTDQDMLTITFPILFSKPTPLQKEELIKEFFPTLDLLQKRDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K5</accession>
    <name>A0A087S3K5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00056</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20309">
        <property type="protein sequence ID" value="KFM20309"/>
        <property type="gene ID" value="AAA799P11_00056"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.54"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="205"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="235"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="274"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="308"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="342" mass="39259" checksum="B3CE2ADB937A1DF2" modified="2014-10-29" version="1">MKKQVRMIFFFFALLFLIPNFLPNSHAHLEQSSSGGVMEGKYFSYIGFEPKNPTPGETVKIIFSIQDENGNDIYDIETMVEIYAANMKQRIFYEPWTKQNIGDFETSFVFEESGTYQIVLSISEENNTIEHVIPPRHMLSSSLECDCTRMLFNISISENWNNIWNSLMVIIVVLPFSVFGYAMWNNYQNKKNSRQKLSRYEILRYVIMFLAFAGGLIHLSIYVDHAPLRVEYGLFLLLAAISQIGFGVLFLSILLVNSNISLNELKYSHRRNSLIYLFGLIGSAVLLGLYIYAVIYPPPLSPENHPEHIDVAGIVAKALEISLVGTIVYIMNWENKLKNKHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K7</accession>
    <name>A0A087S3K7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATP-dependent DNA ligase AMP-binding site protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00058</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20311">
        <property type="protein sequence ID" value="KFM20311"/>
        <property type="gene ID" value="AAA799P11_00058"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.56"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003909">
        <property type="term" value="F:DNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016059">
        <property type="entry name" value="DNA_ligase_ATP-dep_CS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00697">
        <property type="entry name" value="DNA_LIGASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="512" mass="57976" checksum="1DF506EFF536226B" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N3</accession>
    <name>A0A087S3N3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00084</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20337">
        <property type="protein sequence ID" value="KFM20337"/>
        <property type="gene ID" value="AAA799P11_00084"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="5"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="73" mass="8323" checksum="D21691FAA2094A59" modified="2014-10-29" version="1">MVLPIIILVVIPIFLGVSYVAPFDPPSEFEEPQIPESSGATVLYVLLMGIWVVFLLRIIILMRRGSYKITQRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N5</accession>
    <name>A0A087S3N5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein YxiE</fullName>
            <ecNumber evidence="2">3.1.1.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yxiE</name>
        <name evidence="2" type="ORF">AAA799P11_00086</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.61" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20339">
        <property type="protein sequence ID" value="KFM20339"/>
        <property type="gene ID" value="AAA799P11_00086"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.83"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008984">
        <property type="term" value="F:protein-glutamate methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="6"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="15513" checksum="32DE72BB3F4B6247" modified="2014-10-29" version="1">MVGKISKILVPLDGSSNSFRGLDMAIHMARESHSTITGIYILGITKPRTNDPITPVEKILLEHAQKIMKKAKLKAAKKGIVFFDRVSYGDEGKRIVEIADKNNFDMIVIGSRGMGAAKEMFLGSTSNYVLHKSKKPVLIAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P0</accession>
    <name>A0A087S3P0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">K(+)-insensitive pyrophosphate-energized proton pump</fullName>
            <ecNumber evidence="10">7.1.3.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Membrane-bound proton-translocating pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Pyrophosphate-energized inorganic pyrophosphatase</fullName>
            <shortName evidence="10">H(+)-PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">hppA2</name>
        <name evidence="10" type="synonym">hppA</name>
        <name evidence="11" type="ORF">AAA799P11_00091</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>diphosphate + H(+)(in) + H2O = 2 H(+)(out) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:13973"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="7.1.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.3.1" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20344">
        <property type="protein sequence ID" value="KFM20344"/>
        <property type="gene ID" value="AAA799P11_00091"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.88"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004427">
        <property type="term" value="F:inorganic diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009678">
        <property type="term" value="F:pyrophosphate hydrolysis-driven proton transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01129">
        <property type="entry name" value="PPase_energized_pump"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004131">
        <property type="entry name" value="PPase-energised_H-pump"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31998">
        <property type="entry name" value="PTHR31998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03030">
        <property type="entry name" value="H_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001265">
        <property type="entry name" value="H+-PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01104">
        <property type="entry name" value="V_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="57"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="79"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="121"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="222"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="245"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="280"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="307"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="368"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="394"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="462"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="500"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="574"/>
            <end position="607"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="658"/>
            <end position="678"/>
        </location>
    </feature>
    <feature type="site" description="Determinant of potassium independence" evidence="10">
        <location>
            <position position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="679" mass="69744" checksum="DF6AE90C8D8F47EE" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q5</accession>
    <name>A0A087S3Q5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00106</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20359">
        <property type="protein sequence ID" value="KFM20359"/>
        <property type="gene ID" value="AAA799P11_00106"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.103"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="99" mass="11312" checksum="21E9DB23CFEF0FA7" modified="2014-10-29" version="1">MNQQTFTSEKKCDSCFLESSACRCFAFVFSVPNETVNSPTSDVKFVFSNAKPVDIRFFLDDNGEIHSSLRIVPKTVKKENEEISKHNVQKTFQKSNQII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R5</accession>
    <name>A0A087S3R5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00116</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20369">
        <property type="protein sequence ID" value="KFM20369"/>
        <property type="gene ID" value="AAA799P11_00116"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.114"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="219" mass="24601" checksum="486D364880EEBFBA" modified="2014-10-29" version="1">MKIITVIIATVLAFSLVVFPSAYAEPTVKIIMEKTTYSYCEKLFYTIKVSEVTGNPAIIHIRDETGKGSSAIPIPITDLENPVPSRVAFEKEIFPLGKYFIDVEYSGVETTAEFTLIDTGKTCIPETVKPIMANWLSGNISDGFLIDAFQKFTEGLDLFKIPFDINETTVYDVQIPEWVKNVGYWWLEGAISDDELVNAINNLVERNIISLEQETENEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S6</accession>
    <name>A0A087S3S6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Methionine synthase protein</fullName>
            <ecNumber evidence="11">2.1.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">metH</name>
        <name evidence="11" type="ORF">AAA799P11_00127</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the vitamin-B12 dependent methionine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.13" evidence="11"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20380">
        <property type="protein sequence ID" value="KFM20380"/>
        <property type="gene ID" value="AAA799P11_00127"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.126"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008705">
        <property type="term" value="F:methionine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042558">
        <property type="term" value="P:pteridine-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.196.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003759">
        <property type="entry name" value="Cbl-bd_cap"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011822">
        <property type="entry name" value="MetH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036594">
        <property type="entry name" value="Meth_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004223">
        <property type="entry name" value="VitB12-dep_Met_synth_activ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037010">
        <property type="entry name" value="VitB12-dep_Met_synth_activ_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02607">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02965">
        <property type="entry name" value="Met_synt_B12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00809">
        <property type="entry name" value="Pterin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000381">
        <property type="entry name" value="MetH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01018">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47644">
        <property type="entry name" value="SSF47644"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56507">
        <property type="entry name" value="SSF56507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50974">
        <property type="entry name" value="ADOMET_ACTIVATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51337">
        <property type="entry name" value="B12_BINDING_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="4 5" id="KW-0170">Cobalt</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pterin-binding" evidence="7">
        <location>
            <begin position="21"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="B12-binding N-terminal" evidence="10">
        <location>
            <begin position="308"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="B12-binding" evidence="9">
        <location>
            <begin position="426"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="domain" description="AdoMet activation" evidence="8">
        <location>
            <begin position="570"/>
            <end position="832"/>
        </location>
    </feature>
    <feature type="region of interest" description="Methylcob(III)alamin binding" evidence="6">
        <location>
            <begin position="436"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="6">
        <location>
            <begin position="829"/>
            <end position="830"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="5">
        <location>
            <position position="439"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
        <ligandPart>
            <name>Co</name>
            <dbReference type="ChEBI" id="CHEBI:27638"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="484"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="621"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="775"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000381-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000381-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM20380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="832" mass="92341" checksum="F015F18D47F0B3AB" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RN79</accession>
    <name>A0A087RN79_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">V-type ATP synthase beta chain protein</fullName>
            <ecNumber evidence="4">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01522</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000100">
        <property type="protein sequence ID" value="KFM14933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14933">
        <property type="protein sequence ID" value="KFM14933"/>
        <property type="gene ID" value="AAA799P11_01522"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006754">
        <property type="term" value="P:ATP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902600">
        <property type="term" value="P:proton transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022879">
        <property type="entry name" value="V-ATPase_su_B/beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43389">
        <property type="entry name" value="PTHR43389"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-synt_ab_N" evidence="3">
        <location>
            <begin position="2"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM14933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="11084" checksum="8A161A3D20F264E2" modified="2014-10-29" version="1" fragment="single">IVDDVENAAFDELVEVETKDGERRLGKVLEVGNGKAIVQVFEGTTGLSIAATNAKFVGKVMEMPVSREVLGRVFDGLGRPKDGLPDPIADKFIDINGEPMNPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQD8</accession>
    <name>A0A087RQD8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01487</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000078">
        <property type="protein sequence ID" value="KFM15692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15692">
        <property type="protein sequence ID" value="KFM15692"/>
        <property type="gene ID" value="AAA799P11_01487"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="37" mass="4356" checksum="2D822CC9ED79D85E" modified="2014-10-29" version="1" fragment="single">LEKSLRQSISKIGKLVEVIEKPFLIEELENMIKKQPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQI2</accession>
    <name>A0A087RQI2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nitrogen regulatory protein P-II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000075">
        <property type="protein sequence ID" value="KFM15736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15736">
        <property type="protein sequence ID" value="KFM15736"/>
        <property type="gene ID" value="AAA799P11_01480"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1380"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30115">
        <property type="entry name" value="PTHR30115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="109" mass="11780" checksum="6D95A67E35CCAA27" modified="2014-10-29" version="1">MLKIEAILGENDVMAISEALKNIGIGGLTVTKVKGRGKRPGPEIHASKGSEIFVPQFNEKYFIEAIIPDSKEDEVVNIIKENGRVGKIFVSQVLRAVDIATGDEGESTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQL1</accession>
    <name>A0A087RQL1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thrombospondin type 3 repeat-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01476</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000073">
        <property type="protein sequence ID" value="KFM15765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15765">
        <property type="protein sequence ID" value="KFM15765"/>
        <property type="gene ID" value="AAA799P11_01476"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003367">
        <property type="entry name" value="Thrombospondin_3-like_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028974">
        <property type="entry name" value="TSP_type-3_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02412">
        <property type="entry name" value="TSP_3"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103647">
        <property type="entry name" value="SSF103647"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="52"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM15765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="137" mass="14973" checksum="EC0377C41A481455" modified="2014-10-29" version="1" fragment="single">FQDEDGCPDTNPQGGPGGLPDSDKDGFVDTVDNCPTQPETFNGILDTDGCPDDFGSGDRDRDGVPDAVDQCPLNPETYNRFQDLDGCPDTVTDFAFVDTDNDGIQDSIDLCPTEPEVYNDYRDXXXXXXXXXXXXXY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQR2</accession>
    <name>A0A087RQR2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01472</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000071">
        <property type="protein sequence ID" value="KFM15816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15816">
        <property type="protein sequence ID" value="KFM15816"/>
        <property type="gene ID" value="AAA799P11_01472"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="37" mass="3902" checksum="D6E1C4D877605548" modified="2014-10-29" version="1" fragment="single">MRSYTEEIAVDDGTVATSLTITQNLTEEIAVSDGTVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQV2</accession>
    <name>A0A087RQV2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01464</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000067">
        <property type="protein sequence ID" value="KFM15856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15856">
        <property type="protein sequence ID" value="KFM15856"/>
        <property type="gene ID" value="AAA799P11_01464"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="8073" checksum="20FBD4239877FAB9" modified="2014-10-29" version="1" fragment="single">TMIEILVCDCWEDLQPGGFESVDAWLSTAAEKYATSSQATLKSKIEGIENVNLILEITSNDESYLWTLIVFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS99</accession>
    <name>A0A087RS99_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01441</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000054">
        <property type="protein sequence ID" value="KFM16353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16353">
        <property type="protein sequence ID" value="KFM16353"/>
        <property type="gene ID" value="AAA799P11_01441"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="27" mass="3250" checksum="D30B46D848CA4FCF" modified="2014-10-29" version="1" fragment="single">MKIFWIIIPLILFVTIDIVQSFAEDHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSG7</accession>
    <name>A0A087RSG7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase IS4 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01432</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000050">
        <property type="protein sequence ID" value="KFM16421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16421">
        <property type="protein sequence ID" value="KFM16421"/>
        <property type="gene ID" value="AAA799P11_01432"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="126"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="334" mass="38492" checksum="23A98A778054C0F5" modified="2014-10-29" version="1">MTNHVKIPSKIRCESFLIGVLYMLGTLSLYEDVTRRGRPYVYPTVMMLQLLIIKTWMRIPSNNMLHYFLSLDTSQNRKIRSICNLDNLPDRRTFDRRFKIIPLKEIIGTMGSVFLSEKIVENTTASLDSSLIKAKGPVWHKSDMKQNRIPIAGIDIHARWGFSKTRGWVFGYKLHMSCSTGRLIVPLSADFTTANIADCQMYRSLVDSLAGMLQNIIADPAYDDGKLYQYSKENNLRLICPIKKYDSTPPDRLKLVEFYESVEGQEIYSDRKISIEPLFEILKSTFGIRVMPAKGFENTRSFVLVCVLAYQLMVYYNCVTGMENPRIIKRMLCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSS1</accession>
    <name>A0A087RSS1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01426</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000048">
        <property type="protein sequence ID" value="KFM16525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16525">
        <property type="protein sequence ID" value="KFM16525"/>
        <property type="gene ID" value="AAA799P11_01426"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1351"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="120" mass="13280" checksum="47239C5235AA358B" modified="2014-10-29" version="1" fragment="single">TPSIGEKIGDVVKPKGALKPRVQEGVKKLRLQIQKLDKMLSGLQERDGQLFSRIVEATQKHDTQTAKVLGNELAEIRKVIKIMSGARIALEQIELRLTTFSDLGDTVVAIMPTMGLMKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUT9</accession>
    <name>A0A087RUT9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Zinc-binding protein AdcA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">adcA</name>
        <name evidence="4" type="ORF">AAA799P11_01361</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17243">
        <property type="protein sequence ID" value="KFM17243"/>
        <property type="gene ID" value="AAA799P11_01361"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1296"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030001">
        <property type="term" value="P:metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006129">
        <property type="entry name" value="AdhesinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006128">
        <property type="entry name" value="Lipoprotein_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006127">
        <property type="entry name" value="ZnuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01297">
        <property type="entry name" value="ZnuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00691">
        <property type="entry name" value="ADHESINB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00690">
        <property type="entry name" value="ADHESNFAMILY"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="314" mass="34969" checksum="60ABE610A7995814" modified="2014-10-29" version="1">MNTQSKTAIIAIVIVIPLTIFAVYGTDPSKNLETVNDSKLKVISSFYPLHEFSQNIGQDKIDAALLTPIGVEPHDWEPTIRDVQQMESSDLIIINGIGFETWVESLEENNFSGTIVDTSNGILIKTIDESDEEHEEESEEDSHDEHALGDPHIWLNPVLAKIQVQNIANAFSNSDPENRDFYQTNAAAYIKQLDSLDSKIRTDLSTCTNDFIAFHDAFSYFADEYGLTQHTILSLSDPHGDVSARTLEKVISEARDLNIKVIFSEEAVNHKTSEIIANEIGGKVLILSPLEVVEDGTYISKMNDNLENLKEALC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RV92</accession>
    <name>A0A087RV92_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01354</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000034">
        <property type="protein sequence ID" value="KFM17396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17396">
        <property type="protein sequence ID" value="KFM17396"/>
        <property type="gene ID" value="AAA799P11_01354"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1291"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="107" mass="12361" checksum="BAB88F1959943615" modified="2014-10-29" version="1">MEDGEKRLKQEDCSEDVLGSGILTLTNKRLAFDKTRARMMDFSKHMGDTILDVTLDNVTKTWKEGLLMKKVCFIVKTDEGEKTYKFGVFNTKSWLKSIDEAIKNYKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVB4</accession>
    <name>A0A087RVB4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01344</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000033">
        <property type="protein sequence ID" value="KFM17418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17418">
        <property type="protein sequence ID" value="KFM17418"/>
        <property type="gene ID" value="AAA799P11_01344"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="52" mass="5311" checksum="6C15A2A636E278A1" modified="2014-10-29" version="1">MTLDFAVTATMLIIATASIIIAIVPNSGTTFVNTTSSPIGPVLGSDTPYLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVF4</accession>
    <name>A0A087RVF4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydropteroate synthase protein</fullName>
            <ecNumber evidence="2">2.5.1.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sul</name>
        <name evidence="2" type="ORF">AAA799P11_01339</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.15" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000032">
        <property type="protein sequence ID" value="KFM17458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17458">
        <property type="protein sequence ID" value="KFM17458"/>
        <property type="gene ID" value="AAA799P11_01339"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004156">
        <property type="term" value="F:dihydropteroate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009396">
        <property type="term" value="P:folic acid-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045031">
        <property type="entry name" value="DHP_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20941">
        <property type="entry name" value="PTHR20941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00809">
        <property type="entry name" value="Pterin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pterin-binding" evidence="1">
        <location>
            <begin position="15"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="248" mass="27567" checksum="815223C01026D036" modified="2014-10-29" version="1">MTRIANVSVGGKNPVRIMGILNTSPESFYKKSIQTTKTQIKNSVKEMENDGVDFIDIGGMSTAPYLSTIVSEKTESKRILDAVKIIQNVSNIPISVDTCRAKPAKDALEHGVEIINDISGLKYDEKMKDVVSDFTPSLILCAFSSKIMTGNTVSTTKKLLQESLKIAKKSHIPSDKIVLDPSIGLFRKEGKGPFFTKIKSDWVKRDLTIVQNLNSIKGKYPILISVSNKSFLVXXXXXXWRNFEQRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVI9</accession>
    <name>A0A087RVI9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17493">
        <property type="protein sequence ID" value="KFM17493"/>
        <property type="gene ID" value="AAA799P11_01325"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1265"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="69" mass="8356" checksum="736B5C260BE7E6EE" modified="2014-10-29" version="1">MREDDKDIVRFISENGGEVFESELRKKFLQPRTTMWRAVKRLERLGVVEIYKKDLLNMVKLRNDLEEEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ6</accession>
    <name>A0A087RVJ6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Homoserine kinase protein</fullName>
            <ecNumber evidence="2">2.7.11.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">thrB</name>
        <name evidence="2" type="ORF">AAA799P11_01332</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.19" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17500">
        <property type="protein sequence ID" value="KFM17500"/>
        <property type="gene ID" value="AAA799P11_01332"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1272"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004689">
        <property type="term" value="F:phosphorylase kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GHMP_kinases_C" evidence="1">
        <location>
            <begin position="114"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="211" mass="22102" checksum="962E8D0C72D38F01" modified="2014-10-29" version="1">MGSSAASAFDKLFGLKLDGNSLVEYAGYGEKASAGSVHYDNVAASVLGGFVIVKTNPLQVTRIDPPTNLRMCIAVPKLDVPKKKTKVSRGVIPKKIKLTDSILNLSNATTIVAGFMKKDPELIGNSIKDVIVEPARQHMIPGFVKVKQNALKAGALGVTISGAGPSVIAFSKSSADLKKISSAMSRGFASANTKCQTVICKPSKGAADKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ8</accession>
    <name>A0A087RVJ8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Septum site-determining protein MinD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">minD</name>
        <name evidence="4" type="ORF">AAA799P11_01334</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GPN-loop GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17502">
        <property type="protein sequence ID" value="KFM17502"/>
        <property type="gene ID" value="AAA799P11_01334"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1274"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004130">
        <property type="entry name" value="Gpn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030230">
        <property type="entry name" value="Gpn1/Npa3/XAB1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231">
        <property type="entry name" value="PTHR21231"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231:SF8">
        <property type="entry name" value="PTHR21231:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03029">
        <property type="entry name" value="ATP_bind_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="280" mass="30582" checksum="2C929E027B816C29" modified="2014-10-29" version="1">MIFSTKLVFYKLENQASLKYEQIMNQTGLKTIFVSGTAGSGKSLLSSKLYDYYTKNGAFTSILNLDPGVENLPYSCDIDVRDFVDIVSIMQQYDLGPNGALVIAADLIASKIDEIQNEVNRVNPDYLIVDTPGQIELFAYRSSGRFLIDNITSEEKTSIFLFDGALITTPVNFVSIALLATSIRLRLNLPTVNVLTKTDLIGANLKNILQWSTSLSTLENAIAKDADGDTYTLTTNILRGLNLSGFAQGLIPISNVTGDGFVNLEGALSRILNLGEEVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL4</accession>
    <name>A0A087RVL4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01314</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17518">
        <property type="protein sequence ID" value="KFM17518"/>
        <property type="gene ID" value="AAA799P11_01314"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1253"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="73" mass="8638" checksum="25AE8A787C64EB8B" modified="2014-10-29" version="1">MTEDNFKEEKKKLTPDNGFDLIGIDYFSEPGNQLYLVEHFEMYQDALNAKKERKNPDEYFILYKGAGGEFFCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL6</accession>
    <name>A0A087RVL6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01316</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17520">
        <property type="protein sequence ID" value="KFM17520"/>
        <property type="gene ID" value="AAA799P11_01316"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1255"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="235" mass="25444" checksum="961617D88D1FF2DE" modified="2014-10-29" version="1">MDDLLDDVKALLEKDFGDDRILKQIRRACENNEVISNFERNYVKKLAEKHLGRKPDTPALVEKTVVPDVVLPETESAQNTPYVQKTQTIRTEPPRVSSASSKNSKLMIGIGGVALVVIIAITASFSGITNVTPDAVKNPTETVTESLVIQTDFTSYNNKDIISINGVSDTSGSVNLSIENQKGELVWAEQLSLKSDGRYSTLAIAGGPGWESSGTYTIKVDNGAETKSSTFSFTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT3</accession>
    <name>A0A087RWT3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chaperone protein DnaJ</fullName>
            <ecNumber evidence="8">2.7.13.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_01290</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17937">
        <property type="protein sequence ID" value="KFM17937"/>
        <property type="gene ID" value="AAA799P11_01290"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1230"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031072">
        <property type="term" value="F:heat shock protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01152">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012724">
        <property type="entry name" value="DnaJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001305">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00684">
        <property type="entry name" value="DnaJ_CXXCXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="SSF49493"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="SSF57938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02349">
        <property type="entry name" value="DnaJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51188">
        <property type="entry name" value="ZF_CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="6">
        <location>
            <begin position="6"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="CR-type" evidence="7">
        <location>
            <begin position="141"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="5">
        <location>
            <begin position="141"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM17937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="361" mass="39242" checksum="390300138AFECCB1" modified="2014-10-29" version="1">MSSKRDYYEVLGVSKSSSPDEIKKQYRKLALKFHPDRNQSAEAAEHFKEISEAYAVLSDSEKKQLYDQHGHAGVDGRYSSEDIFQGARGDFSDIFGRGGGGFDSIFESIFGRGGGGFGFGQERGSDILYQTSVTLEDVLHGKQMEIELQKQIQCDTCSGSGCKPGTDKKTCSACNGQGQVRQTRNMGFASFVTAAPCSSCRGQGSIIETPCGDCKGKGQKKGSKKVTFDIPPGIDSGDYTVPNEGNEVPGGSNGDLIVRVRVQPHSKFNRDGKDIFYDQDVSMVDAALGCEVVVPTLEGTEKIKVDSGSQPNTIIKLKGKGVPHINSRGRGDQYVRIVVNIPKKLNKHQKNLLDEFKQTSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV7</accession>
    <name>A0A087RWV7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">PRC-barrel domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01269</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17961">
        <property type="protein sequence ID" value="KFM17961"/>
        <property type="gene ID" value="AAA799P11_01269"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1217"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027275">
        <property type="entry name" value="PRC-brl_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011033">
        <property type="entry name" value="PRC_barrel-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026870">
        <property type="entry name" value="Zinc_ribbon_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05239">
        <property type="entry name" value="PRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13240">
        <property type="entry name" value="zinc_ribbon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50346">
        <property type="entry name" value="SSF50346"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRC" evidence="2">
        <location>
            <begin position="171"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="zinc_ribbon_2" evidence="3">
        <location>
            <begin position="240"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="110"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="125"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="263" mass="28525" checksum="E34EB2AC03C39844" modified="2014-10-29" version="1">MSSELRVKKLRGSGGYVMARVTDEQQMKGNLGGPDLFLAPIGRLDADKISKHFCNTCEKEFDGAPKIEFENPNEEVAENLILAERGQYICNTCESSIAEYREFKKQDEAGDVGNAKPLEPQTEVAPQVETPQPTVESTPQPTVESTPQPVEEPEIQSPQETTTQPSPTTSVSSIEGRAVYDENANKIGSAKQVGIDSTQSMVLVITQNDGTEGSIPWKNIKKIGEVILLGNPEESTPPGKCSNCGFSNKEGSKFCEECGTPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW2</accession>
    <name>A0A087RWW2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chaperone protein DnaJ 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">dnaJ1</name>
        <name evidence="1" type="ORF">AAA799P11_01279</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17966">
        <property type="protein sequence ID" value="KFM17966"/>
        <property type="gene ID" value="AAA799P11_01279"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1222"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="87" mass="9539" checksum="B55FC7213220140B" modified="2014-10-29" version="1">MTEDVCDFCKGVGSSGSNVCVYCNGTGEWNQAAQAYVKNHICQCIVMDRKFCPVCNKPCHHDTSLNPKQKIDPGYGGMSEKEVTVMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY1</accession>
    <name>A0A087RWY1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17985">
        <property type="protein sequence ID" value="KFM17985"/>
        <property type="gene ID" value="AAA799P11_01250"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1205"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="197"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="223" mass="24361" checksum="8ACF2507A2305908" modified="2014-10-29" version="1">MIKIILVLILFSGVLTTPAFAQDVKNPSLIINTIEIPATGFHTTQRDAPIVKFDKIHAVSWQVTIDNNLIYSIPDGNAVLRLYDAESQDRFVEVGMGSIPDNKFWVAVQTLKEGYVVVHSDLERGWYPEAKSIISFTDRAGLTVNNGARIVVTNLDIGEFAIGSYAVHGMEGSIEPPAANSGIMSVEFLSGDPAKNVFAFFPFYMAAGIGTITGIMYLTKKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY3</accession>
    <name>A0A087RWY3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01252</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17987">
        <property type="protein sequence ID" value="KFM17987"/>
        <property type="gene ID" value="AAA799P11_01252"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="286" mass="33543" checksum="B5FE96384E9EC2AE" modified="2014-10-29" version="1">MGIQKNKNQTLDSFLCPASEQSNSTLQNVADFVSEHKFLTNWMDIEYQGWTLPATHEPHDWCGLWKTIGCNRTDLHEKLGKGRLTYVKQFRRSCYRAKCKSCYTNWIARQANVSTRRVEAYFEKSKQRPIHLILAVPENQRELPVKLLRQRMSHILKLGNIKGGSVIFHPFRFSKTQHRWYASPHFHLVGFGKSSDIKNAFGRYGWYVKEAGERESVFQTFCYLLSHCGVQKGYQAVTWFGSLSYSKLHVEKEPRITKCPLCNGEFEEIYYEEWIHPIIPPDKHFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI6</accession>
    <name>A0A087RXI6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-ketoacyl-CoA thiolase protein</fullName>
            <ecNumber evidence="3">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fadA</name>
        <name evidence="3" type="ORF">AAA799P11_01221</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18190">
        <property type="protein sequence ID" value="KFM18190"/>
        <property type="gene ID" value="AAA799P11_01221"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1174"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="1">
        <location>
            <begin position="18"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="2">
        <location>
            <begin position="250"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="384" mass="40269" checksum="02889856DC800F96" modified="2014-10-29" version="1">MEKVCVLGAGSTKDGKLADSIADITTQASVAAIESAGISPKDIDASYISNVFGVADKQVHIGPVLMSRLGIPDKPSLTIESACGSGSVSFREAYANVAAGFYDCLLVTGVEKVTHTGTEWTTTYFAYCSDFFYEGQAGASFPGLFASMARAYMTEFNTTEEDFARVAVKNHDNGVLNPKAHMQKKITIDDVMNSAVVASPLKLFDCCPFSDGASSVILCSEKFAKEHGGDYVECIGSGRGGSPAALQGRDHMTTIPSTKLAAASAYKMAGITAKDVDFAEVHDCFTIAEVVDTEDLGFFEKGKGVEAVREGRTSLNSDISINPSGGLKSKGHPIGATGVGQVVEVYDQLTGNAGERTVKDAKIGLTHNFGATGASCAVHVFQSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL7</accession>
    <name>A0A087RXL7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Proteasome subunit alpha protein</fullName>
            <ecNumber evidence="4">3.4.25.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01138</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase T1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18221">
        <property type="protein sequence ID" value="KFM18221"/>
        <property type="gene ID" value="AAA799P11_01138"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1100"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019773">
        <property type="term" value="C:proteasome core complex, alpha-subunit complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004175">
        <property type="term" value="F:endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000426">
        <property type="entry name" value="Proteasome_asu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10584">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00948">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 2 4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PROTEASOME_ALPHA_1" evidence="3">
        <location>
            <begin position="8"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="245" mass="26823" checksum="AB48B928D9631791" modified="2014-10-29" version="1">MLPAQQGYDRAITVFSPDGRLYQVEYAIETVRRGTIAVGVKCKDGIVIAVEEKPRKLQISNTAQKIFQIDDHVGVAAAGYIPDARSQVDNARFFSQSNKMIYDEPVEVETIAKHLADQSQQYTQYAGVRPFGVALILGGVVSGKPQLFLTDPSGTYISYDAIAIGSGSDQVTDFLEKTYKNDLSIDEASALASAGIYLSSEDKEGTSHIRMTHIKTDSGLYEIVSDEQVANYANAAKEKYPHDKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM3</accession>
    <name>A0A087RXM3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">30S ribosomal protein S19P</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rps19</name>
        <name evidence="5" type="synonym">rps19p</name>
        <name evidence="7" type="ORF">AAA799P11_01144</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5 6">Belongs to the universal ribosomal protein uS19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18227">
        <property type="protein sequence ID" value="KFM18227"/>
        <property type="gene ID" value="AAA799P11_01144"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1105"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00531">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020934">
        <property type="entry name" value="Ribosomal_S15/S19_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002222">
        <property type="entry name" value="Ribosomal_S19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023575">
        <property type="entry name" value="Ribosomal_S19_S15_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005713">
        <property type="entry name" value="Ribosomal_S19A/S15e"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880">
        <property type="entry name" value="PTHR11880"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00203">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002144">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00975">
        <property type="entry name" value="RIBOSOMALS19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54570">
        <property type="entry name" value="SSF54570"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01025">
        <property type="entry name" value="uS19_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00323">
        <property type="entry name" value="RIBOSOMAL_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="131" mass="14944" checksum="BF8CE7A5B5FC4D5B" modified="2014-10-29" version="1">MVKEFSYRGIPKEELENMSLEKLFQLFNARQRRSLTRGINDGKRKLIEEIKAAKAGKLKNPIKTHVRDLIILPYMVDVTVNVFSGKEFRPVTIRTEMIGHYLGEYVITNKKVQHGAPGVGASRSSLYVPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN2</accession>
    <name>A0A087RXN2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">rpl5</name>
        <name evidence="8" type="ORF">AAA799P11_01153</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit; contacts the 5S rRNA and probably tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the universal ribosomal protein uL5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18236">
        <property type="protein sequence ID" value="KFM18236"/>
        <property type="gene ID" value="AAA799P11_01153"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1114"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01333_A">
        <property type="entry name" value="Ribosomal_L5_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002132">
        <property type="entry name" value="Ribosomal_L5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022804">
        <property type="entry name" value="Ribosomal_L5_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031309">
        <property type="entry name" value="Ribosomal_L5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022803">
        <property type="entry name" value="Ribosomal_L5_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031310">
        <property type="entry name" value="Ribosomal_L5_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11994">
        <property type="entry name" value="PTHR11994"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00281">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00673">
        <property type="entry name" value="Ribosomal_L5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002161">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55282">
        <property type="entry name" value="SSF55282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="4" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L5" evidence="6">
        <location>
            <begin position="7"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L5_C" evidence="7">
        <location>
            <begin position="64"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="173" mass="18865" checksum="D4F7D21EECCE69CB" modified="2014-10-29" version="1">MSQTTESPMKKISLEKVVLNMGVGKSGDVIDIAKRALEQISGKKPSARNAKETQRDWGIRKGEPIGVAVTIRGDDAKALLKRLFEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGISVTLTRPGYGIRRRSKHKASVGKSHIITNQEAKDYLVKEFGVTVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXP8</accession>
    <name>A0A087RXP8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01174</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18252">
        <property type="protein sequence ID" value="KFM18252"/>
        <property type="gene ID" value="AAA799P11_01174"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11331" checksum="32825BE7C7727D89" modified="2014-10-29" version="1">MESEDRKELETLLDIVINQIPSYTNMVHSANWDVNSDDCIFGMVYHSFVAKSTEYLKNKLTDTEQATNAESTFEMMDSISEVFNNRLADIKQAIVSAANT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ2</accession>
    <name>A0A087RXQ2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Amidophosphoribosyltransferase</fullName>
            <shortName evidence="5">ATase</shortName>
            <ecNumber evidence="5">2.4.2.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Glutamine phosphoribosylpyrophosphate amidotransferase</fullName>
            <shortName evidence="5">GPATase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 11" type="primary">purF</name>
        <name evidence="11" type="ORF">AAA799P11_01178</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = 5-phospho-alpha-D-ribose 1-diphosphate + H2O + L-glutamine</text>
            <dbReference type="Rhea" id="RHEA:14905"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58681"/>
            <dbReference type="EC" id="2.4.2.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5 8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5 9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Purine metabolism; IMP biosynthesis via de novo pathway; N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5 6">In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.14" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18256">
        <property type="protein sequence ID" value="KFM18256"/>
        <property type="gene ID" value="AAA799P11_01178"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1135"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004044">
        <property type="term" value="F:amidophosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009113">
        <property type="term" value="P:purine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01931">
        <property type="entry name" value="PurF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005854">
        <property type="entry name" value="PurF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000485">
        <property type="entry name" value="Amd_phspho_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5 6 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5 9" id="KW-0408">Iron</keyword>
    <keyword evidence="5 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5 6" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="10">
        <location>
            <begin position="16"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5 7">
        <location>
            <position position="16"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="300"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="365"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="366"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="402"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="461"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="464"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM18256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="489" mass="53364" checksum="A7FDC176A04C69A4" modified="2014-10-29" version="1">MDKPQHTLDDKPKENCGVIGIYSLSGANVIPMAIDALRALQHRGQEAWGLAIPNKPPLKRLGLVSAASSEFKTISQEYSSPCVIGHVRYSTMGRSSLENAQPLKVKDLCVAHNGTIANVQELSNLVGGCSFTPQNASDTLVAAQRLVSLISENGQMGKALSVLKNEMVGSYCFTFISDDNSVFAARDPKGFRPMVLGHKESDDTYIVASESSAVSAVGAKMERNVTPGELIRMSKDGIETEMFSDDPKRAHCSFEFTYFAHPTSNMEGTNIYVARKNIGRFLAKKFPIKDADLVIPVPDSARPAALGYAQELGVSFDEGLLKDRYSKKGPLRSFIEPHQTDRVEINRWIIPIREIIDGKHVVVIDDSLVRGTSSKAIIKALRRAGARKISMVITYPPIKFPCYAGIDFPSQEELATFSNGKDMSDEETVDMVRKDIGADFLGYNDAENLAAAVGIPTDSMCFTCASGNYESLGITPEFKSREEIKGEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ4</accession>
    <name>A0A087RXZ4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Site-specific DNA-methyltransferase (adenine-specific)</fullName>
            <ecNumber evidence="2">2.1.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01123</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyadenosine in DNA + S-adenosyl-L-methionine = an N(6)-methyl-2'-deoxyadenosine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:15197"/>
            <dbReference type="Rhea" id="RHEA-COMP:12418"/>
            <dbReference type="Rhea" id="RHEA-COMP:12419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90615"/>
            <dbReference type="ChEBI" id="CHEBI:90616"/>
            <dbReference type="EC" id="2.1.1.72"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.72" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="A0A087RXZ4"/>
    <dbReference type="EnsemblBacteria" id="KFM18348">
        <property type="protein sequence ID" value="KFM18348"/>
        <property type="gene ID" value="AAA799P11_01123"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1086"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022749">
        <property type="entry name" value="D12N6_MeTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003356">
        <property type="entry name" value="DNA_methylase_A-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038333">
        <property type="entry name" value="T1MK-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12161">
        <property type="entry name" value="HsdM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02384">
        <property type="entry name" value="N6_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HsdM_N" evidence="5">
        <location>
            <begin position="10"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="N6_Mtase" evidence="4">
        <location>
            <begin position="129"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="465"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="492" mass="56015" checksum="62F5A2A1E9DC8642" modified="2014-10-29" version="1">MSNEAPAVVAKLWNFCNVLRDDGVSYGDYVQQLTNLLFLKMADEQTKPPFKKESIIPKKYDWTTLTNKTGDDLETHYRHVLENLATEKGLLGVIFRKSQNKIQDPAKLERLVKLIDGDSKDEILWSGMDIDVKGEIYEGLLEKNAEDVKSGAGQYFTPRALISTMVDVIQPKPKETIGDPACGTGGFFLSAHKYLTENFNLDPEQKKFLRDGTFKGWDIVTEVVRLCAMSMYLHGIGSTESQITAGDSLISDSGDRFDIIMTNPPFGKKSSTIIFSEEGKAERETLSYERDDFWATTSNKQLNFLQHVKTILKVNGRCAIVVPDNVLFEGGAGETVRQKMLEQMNCHTLLRLPTGIFYAGGVKANVLFFDKKPARTDGKPWTEKMWIYDFRTNQHFTLKENQLTREHLDDFVKCYNAKNILKRKETDQFHAYSYAELIKRDKVSLDIFWLKDESLEDIENLPPPEEIAEEIKDNLESALDSINELIDNLGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY29</accession>
    <name>A0A087RY29_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01096</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18383">
        <property type="protein sequence ID" value="KFM18383"/>
        <property type="gene ID" value="AAA799P11_01096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="66" mass="7144" checksum="6F5168F494542E5F" modified="2014-10-29" version="1">MVHSEHNKSKNSGGFALIILGALLLIIGPQEAIVPKSMSVATWVAGLVIGGLGFYLKFIRHRTKQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY48</accession>
    <name>A0A087RY48_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18402">
        <property type="protein sequence ID" value="KFM18402"/>
        <property type="gene ID" value="AAA799P11_01115"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1076"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009409">
        <property type="entry name" value="DUF1059"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06348">
        <property type="entry name" value="DUF1059"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="67" mass="7666" checksum="3DE87B8AF9D48F39" modified="2014-10-29" version="1">MKYNIQKNITKSKLIKLKCSDYGFECGFSVEGDTEAVIEEFGAHTENEHGIDYSKEALMQFILRKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF0</accession>
    <name>A0A087RYF0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative molybdenum cofactor guanylyltransferase protein</fullName>
            <ecNumber evidence="2">2.7.7.60</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mobA</name>
        <name evidence="2" type="ORF">AAA799P11_01074</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.60" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18504">
        <property type="protein sequence ID" value="KFM18504"/>
        <property type="gene ID" value="AAA799P11_01074"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1036"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050518">
        <property type="term" value="F:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025877">
        <property type="entry name" value="MobA-like_NTP_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12804">
        <property type="entry name" value="NTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transf_3" evidence="1">
        <location>
            <begin position="3"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="194" mass="21821" checksum="9CC833A2D68D4DD3" modified="2014-10-29" version="1">MIGIVMAGGKGTRMNLDNEKLLLHYKKPIIFHVIDSLKNSNCFSKVIAVTSPNSPKTKKLLEENNIETFDTSGLGYVEDLNLVLQKFNDLVFVTSGDMPLLDEKIIQTIVNQHDSNKIWTSILVTEKLLTSIGTNSEYSMIHNNQKCNFTGISLIDSQKINSLENLEENFVILDDKRIALNLNTKQDYDLLSTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF9</accession>
    <name>A0A087RYF9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01083</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18513">
        <property type="protein sequence ID" value="KFM18513"/>
        <property type="gene ID" value="AAA799P11_01083"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="52" mass="6182" checksum="044EB9323296A120" modified="2014-10-29" version="1">MQCSISECKSKAIQTVQISFRETRNLCKEHFELFQNKDKKHTINFTKASEFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ32</accession>
    <name>A0A087RZ32_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA replication licensing factor MCM4 protein</fullName>
            <ecNumber evidence="5">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_01031</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the MCM family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18736">
        <property type="protein sequence ID" value="KFM18736"/>
        <property type="gene ID" value="AAA799P11_01031"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.992"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041562">
        <property type="entry name" value="MCM_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027925">
        <property type="entry name" value="MCM_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033762">
        <property type="entry name" value="MCM_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="PTHR11630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17855">
        <property type="entry name" value="MCM_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14551">
        <property type="entry name" value="MCM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17207">
        <property type="entry name" value="MCM_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01657">
        <property type="entry name" value="MCMFAMILY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00350">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM" evidence="4">
        <location>
            <begin position="300"/>
            <end position="505"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="695" mass="78091" checksum="5E744C5B7188F407" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ38</accession>
    <name>A0A087RZ38_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Rhizopine catabolism protein MocA</fullName>
            <ecNumber evidence="3">1.1.1.267</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mocA</name>
        <name evidence="3" type="ORF">AAA799P11_01037</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.267" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18742">
        <property type="protein sequence ID" value="KFM18742"/>
        <property type="gene ID" value="AAA799P11_01037"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.998"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030604">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="2"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="156"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="311" mass="35255" checksum="FFD02062A71994B4" modified="2014-10-29" version="1">MKIVQIGTGGWGKNHARVLSELGVLSAICDTDAQRSKEFGEKHSVNHYKSLEEMLTSEEFDGAFVVTPTSTHADIAKKLLEAKKHVFVEKPLTYKTEEGEELAKLAEKNKVILTCGYIERFNPAVGVVKNLVKEKKYGELIMLEFHRENRMPLHIKDVGIIYDTSVHDIDTANWLFDEMPNVVFARTGQIKHEHEDFATIMLGYKDNKVAIITSNWITPKRIRKFYAICNDARISSDFITQEIKVEKQEEIENIENEKQEPLLVEIQSFLDAIEGKSKHIVTAQQAVNVSKIAEAALLSSQKGVPIYLDLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ41</accession>
    <name>A0A087RZ41_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase FAD-NAD-binding subunit protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01040</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18745">
        <property type="protein sequence ID" value="KFM18745"/>
        <property type="gene ID" value="AAA799P11_01040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="36" mass="4048" checksum="5DB6EF3A94DA94E9" modified="2014-10-29" version="1" fragment="single">SFASSSPSSVLYVRGFVTEHDKREDGSFEVKYESYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ84</accession>
    <name>A0A087RZ84_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycogen synthase protein</fullName>
            <ecNumber evidence="3">2.4.1.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00997</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.11" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18788">
        <property type="protein sequence ID" value="KFM18788"/>
        <property type="gene ID" value="AAA799P11_00997"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004373">
        <property type="term" value="F:glycogen (starch) synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="34"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="193"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="377" mass="43515" checksum="07C9C86B5208B450" modified="2014-10-29" version="1">MKKICVFPNDPLLAYHKKGEIKPRYFNPKNMFDEVHVISLFDSDVDEDKVKIVAGDAKFKIHVTGKVNLLNRKSKKKEVIKIIQDIAPDVIRAYNPLLQGWMAAQIKKELKIPLVVSLHGDYDRDRRHFAKKNRDYKSYFKLLYSKNTLESESLKNANEVIIIYEFLRKYAEKMGAKNINLIHNRIDLNQFMEKNQPAFNESKPTIVCVGRLIKEKNQECLIRAIKDLDVILVIIGDGVEYDNLVKLVKELGISEKVRFERSIPHKKIQNYYAAADIFALPIKYGGFAIPSIEAAASELPVILPKQEFDSNPDIISDFALLVENNPESFKEAILKILENEELREKLIKKGKDVVNKINSDVMEEKEKNLYLKLLEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ85</accession>
    <name>A0A087RZ85_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PTS system polysaccharide transporter protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00998</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18789">
        <property type="protein sequence ID" value="KFM18789"/>
        <property type="gene ID" value="AAA799P11_00998"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="141"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="277"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="363"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="393"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="425"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="456"/>
            <end position="479"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="498" mass="56384" checksum="3373EF2C437238D0" modified="2014-10-29" version="1">MEGIRVTYSGLISFLVGASTIFTGLIFTLIITRQLTQDEFGTWAIIGTLTGYVLLLNPIISYWNTREIARGKETGKTAIVSTGFFSAVAFFVYLVIAHVYSNGVEIDQTILLFAAMLIPLQFFRGTLIGIANGYKPQLEEFGMIAFEILKIVLALVFLYFLDLGLYGLIIVIFFSTLASIIVMIVNLKNKIKGNFSKELVKNWLKRFWIPIYPQIPVAVLSTEMIIFSIFTGGVGGIAYWTAAFTVSRIVRNSRLISKAVYPKVLQGGPKEIFEKNFTHVLFFAFPLAAISLVFAKPGLFALNPIYEVAFPIVLWIVPTIFLRTITEVFGSVLQGLDKVDTKEDSTFKDYIKSKLVFIPTLKIIHRISYVSIFALVLFLLSLQKLEEIELVKYWAVVALTTQIPLTIYVYILLQKEIKPEFETKAILKYFLSAIIVFNIMYFVIENNLEYNESIFIFLPELLGYLAISAIGYFGLTFAIDKKTRKLVKRVLKEIRGNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ88</accession>
    <name>A0A087RZ88_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Heparan sulfate-glucosamine 3-sulfotransferase 3 protein</fullName>
            <ecNumber evidence="3">2.8.2.30</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01001</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.2.30" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18792">
        <property type="protein sequence ID" value="KFM18792"/>
        <property type="gene ID" value="AAA799P11_01001"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033872">
        <property type="term" value="F:[heparan sulfate]-glucosamine 3-sulfotransferase 3 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037359">
        <property type="entry name" value="NST/OST"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10605">
        <property type="entry name" value="PTHR10605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sulfotransfer_1" evidence="2">
        <location>
            <begin position="44"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="299" mass="36117" checksum="7A24BC1A709237DC" modified="2014-10-29" version="1">MAKIQSQTRKYIRHKLDKHKKLQNISTSLYLKYCSLVGPLHVLPNFMIIGFPKCGTTSLYDYLTQHPQIIPPLGKEIDFFDRLYERGVNWYRVRFPSKTQVLFKQITSNKKILTGEATPRYAFHPLALERIKQLIPDGKFIILLRNPIDRAYSHYNMNFQNGYEYRNFEDAIEHEEERILDRYQKMESTSNYYSWDFDLFGYLEQGKYAQYITKWLKLFPKENFLILQSEEFLKNPQLVYHQTLNFLDLPKWEPEKYSPAKKRDYSSPIDESFRIKLSKYFQKYNDDLYELIGKKFHWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ91</accession>
    <name>A0A087RZ91_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-inositol 3-phosphate glycosyltransferase protein</fullName>
            <ecNumber evidence="2">2.4.1.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mshA</name>
        <name evidence="2" type="ORF">AAA799P11_01004</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.11" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18795">
        <property type="protein sequence ID" value="KFM18795"/>
        <property type="gene ID" value="AAA799P11_01004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004373">
        <property type="term" value="F:glycogen (starch) synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="170"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="367" mass="42601" checksum="F6F2DF4F9C75DB13" modified="2014-10-29" version="1">MKILHTGNMANLGYFITKQLRERSLNVELLMEKSPKKLSDPLTFDTSLNGKYPNWIHFFDKSKFLWFIRILKQMRSKDIELIHAYVEFPIFALFSNKPYVAYAQGSDLRELAFSNSVKGILLRLAYKKAKLVITAQPDHIPFIKNLKIPNWIFLPVPWNDEIIMENQTCQKNKQKFTIFHPSDLNWSLKGNDIFIKGFAKFVKKFPNSILIIIERGKDSSNTKKLIHELKIEDHIQFIKGPLLKDELFSYYGSCDVVVDQFIVGSLGTIALEAMLHEKPVITFIHKTLYQNAYSEMPPVQIASNSDEILCRLESLINEKNRLSVGKKSREWVQTFHSSNLIIKNLIMIYDSILKKKSIDEIKSKIDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB8</accession>
    <name>A0A087RZB8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00943</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18822">
        <property type="protein sequence ID" value="KFM18822"/>
        <property type="gene ID" value="AAA799P11_00943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009409">
        <property type="entry name" value="DUF1059"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06348">
        <property type="entry name" value="DUF1059"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="54" mass="6440" checksum="233A3964C8FFCE93" modified="2014-10-29" version="1">MSALNCRYYGFECNFEVKGDIKDIVNKMREHAFEEHKIDLSKEFLSQMSLRKIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB9</accession>
    <name>A0A087RZB9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">N-acetylglucosamine-6-phosphate deacetylase protein</fullName>
            <ecNumber evidence="10">3.5.1.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">AAA799P11_00944</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ammonia transporter channel (TC 1.A.11.2) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.25" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18823">
        <property type="protein sequence ID" value="KFM18823"/>
        <property type="gene ID" value="AAA799P11_00944"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.910"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008519">
        <property type="term" value="F:ammonium transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047419">
        <property type="term" value="F:N-acetylgalactosamine-6-phosphate deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008448">
        <property type="term" value="F:N-acetylglucosamine-6-phosphate deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029020">
        <property type="entry name" value="Ammonium/urea_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001905">
        <property type="entry name" value="Ammonium_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018047">
        <property type="entry name" value="Ammonium_transpt_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024041">
        <property type="entry name" value="NH4_transpt_AmtB-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43029">
        <property type="entry name" value="PTHR43029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00909">
        <property type="entry name" value="Ammonium_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01219">
        <property type="entry name" value="AMMONIUM_TRANSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0924">Ammonia transport</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="196"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="224"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="265"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="303"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="338"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="366"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="390"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="421"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="465"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="domain" description="Ammonium_transp" evidence="9">
        <location>
            <begin position="74"/>
            <end position="518"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="521" mass="54876" checksum="4931FE68DF397EC6" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC3</accession>
    <name>A0A087RZC3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">1-pyrroline-5-carboxylate dehydrogenase protein</fullName>
            <ecNumber evidence="3">1.2.1.88</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rocA</name>
        <name evidence="3" type="ORF">AAA799P11_00948</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.88" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18827">
        <property type="protein sequence ID" value="KFM18827"/>
        <property type="gene ID" value="AAA799P11_00948"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003842">
        <property type="term" value="F:1-pyrroline-5-carboxylate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="2">
        <location>
            <begin position="55"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="523" mass="58065" checksum="8E03C106E10807EB" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG1</accession>
    <name>A0A087RZG1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00896</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18865">
        <property type="protein sequence ID" value="KFM18865"/>
        <property type="gene ID" value="AAA799P11_00896"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="218" mass="24908" checksum="F5EBA6F27D39453B" modified="2014-10-29" version="1">MKKIILIIFVLAMISTNYASAHKPISHDDSHRSFDSALVIPDHKISWAIYENLGISEAKFYTFEAKKGDSFYASIVIPKIQGLENYAPTLQLVGEDNFIIEKAIYEKGFPGNEFYEPFGQVTYWERQELRAEIPQDGTYFIVVTDEKNQSGKYSLAVGEIEDFSGENMFTLLPKAWLDTKLFVNDYFSITIVFGIFIALCSIPTVVIFKKKKNKIEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG2</accession>
    <name>A0A087RZG2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00897</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18866">
        <property type="protein sequence ID" value="KFM18866"/>
        <property type="gene ID" value="AAA799P11_00897"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.859"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="10806" checksum="4293CB5E565E4498" modified="2014-10-29" version="1">MNAWNKFWKWYENKILGSVIVIAIIQFIQVPHMVWNADIMLEAGFVSRVHPVIDWFLYGVDLIEIVSIVNVGMIMYSLLKKRQSQKRLAAKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG5</accession>
    <name>A0A087RZG5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18869">
        <property type="protein sequence ID" value="KFM18869"/>
        <property type="gene ID" value="AAA799P11_00900"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.862"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007366">
        <property type="entry name" value="DUF432"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04254">
        <property type="entry name" value="DUF432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019202">
        <property type="entry name" value="UCP019202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="258" mass="29070" checksum="075AB45D9A8E023A" modified="2014-10-29" version="1">MCEIPCFDMSSDPEQNFLNYGIYTITDDVEFNFPGTEIKFKKLSENAFLYQKNDLTEKIVEKNVPSASGSIQIEICPIRPLNYPAKRTDYVYLDFTTPVFLPSGSSVVLNALCQIEVGIFVIHDSTKDSLDWFDCNLSDSRFALYGTPDSGVLCKYSKSPIVSSDIDSDPYENASIQITIKNELSDGRSVRRIVFPATAFSLYYKDNKAKFDNASAILKKKLALEMIDVSPEKIQTDWQKSTTYEITSTVKHSQMGVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI8</accession>
    <name>A0A087RZI8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Poly(3-hydroxyalkanoate) polymerase subunit PhaE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00923</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Biopolymer metabolism; poly-(R)-3-hydroxybutanoate biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18892">
        <property type="protein sequence ID" value="KFM18892"/>
        <property type="gene ID" value="AAA799P11_00923"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.886"/>
    <dbReference type="UniPathway" id="UPA00917"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042619">
        <property type="term" value="P:poly-hydroxybutyrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010123">
        <property type="entry name" value="PHA_synth_III_E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09712">
        <property type="entry name" value="PHA_synth_III_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0583">PHB biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="161"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="192" mass="22379" checksum="889B304D9E6FEF58" modified="2014-10-29" version="1">MQSESTKDITDYYKHLSLFWTDIIHLMSSKPQALASIGPMRAFAANSKKISTELIEINEDLMEFNKHLTEYYKQLADTWADAQKKVNLKAPEIPQDVEQIEAVKRIWIDIFDNDFTELFDSGKFGDNYGKLVSKELELTKHWNNITNVILQSVNLPSKEEIDEVYKEIHSLKKRVAKLELELKKKEMKKNAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN6</accession>
    <name>A0A087RZN6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phospholipiddiacylglycerol acyltransferase protein</fullName>
            <ecNumber evidence="2">2.3.1.158</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00886</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.158" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18940">
        <property type="protein sequence ID" value="KFM18940"/>
        <property type="gene ID" value="AAA799P11_00886"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.848"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046027">
        <property type="term" value="F:phospholipid:diacylglycerol acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="258" mass="30494" checksum="F828CF7CD7881FD1" modified="2014-10-29" version="1">MIRNAKLSDKHQVLKFCQNTFSWGDYVEHVWDFWLAEDFLFVYEKESPIGICHAFFSKNQVWIEGIRVDPNFRKQKIASDLVKHVESIGRKDNVPFSFMLIDTENHISLSMAKSLEYEIFQTWNFYSLEPEKNSNFNIFFANSLNEQICTHYVKSWRWLPLDTSIISEFSKQNKIIQSKIDDKTSTAILSDSEHFEKTLIVTLFSGSEKTTLQILLFLQNHAMENNYSRIQILTKEKLPNLELLEHKLSFHLLRKKLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZT2</accession>
    <name>A0A087RZT2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00838</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18986">
        <property type="protein sequence ID" value="KFM18986"/>
        <property type="gene ID" value="AAA799P11_00838"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.805"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="99" mass="11923" checksum="91C7E7827E08EB7E" modified="2014-10-29" version="1">MGFLSNFRKELQSAKAKKASQINGKTLKGLLKTFKEERDRIEKETGSRPEIDETTRMYMQKVLNVWISEGKRIDEEKFWREVDYNRQFSHPVEYYEIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0K7</accession>
    <name>A0A087S0K7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Methionine adenosyltransferase</fullName>
            <ecNumber evidence="6">2.5.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">metK</name>
        <name evidence="17" type="ORF">AAA799P11_00779</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + L-methionine = diphosphate + phosphate + S-adenosyl-L-methionine</text>
            <dbReference type="Rhea" id="RHEA:21080"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.5.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; S-adenosyl-L-methionine biosynthesis; S-adenosyl-L-methionine from L-methionine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the AdoMet synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19261">
        <property type="protein sequence ID" value="KFM19261"/>
        <property type="gene ID" value="AAA799P11_00779"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.750"/>
    <dbReference type="UniPathway" id="UPA00315">
        <property type="reaction ID" value="UER00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006556">
        <property type="term" value="P:S-adenosylmethionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00086">
        <property type="entry name" value="S_AdoMet_synth1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022631">
        <property type="entry name" value="ADOMET_SYNTHASE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022630">
        <property type="entry name" value="S-AdoMet_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022629">
        <property type="entry name" value="S-AdoMet_synt_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022628">
        <property type="entry name" value="S-AdoMet_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="PTHR11964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02773">
        <property type="entry name" value="S-AdoMet_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02772">
        <property type="entry name" value="S-AdoMet_synt_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00438">
        <property type="entry name" value="S-AdoMet_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000497">
        <property type="entry name" value="MAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="SSF55973"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01034">
        <property type="entry name" value="metK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00376">
        <property type="entry name" value="ADOMET_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00377">
        <property type="entry name" value="ADOMET_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="13" id="KW-0630">Potassium</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 17" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-AdoMet_synt_N" evidence="14">
        <location>
            <begin position="4"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_M" evidence="15">
        <location>
            <begin position="118"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_C" evidence="16">
        <location>
            <begin position="236"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="KFM19261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="388" mass="43015" checksum="E2B9030A512EE8D1" modified="2014-10-29" version="1">MTNNFLFTSESVTEGHPDKICDNISDAFLDEFLRQDPDSRVAVETMVTTDFVAVAGEVTSKADFDKKAQEELVRKTIREIGYNNKDLMFDTESCEVTLRLHSQSPDISQGVTATEDKEQGAGDQGLMFGYATNETEELMPMPILLSQKLAQKLSEVRKNNTLPWARPDGKTQVSVRYEDDKPTKIETVVVSTQHAPEISQEEIEREIIDKVIKPVLGNLWNDDIKIHINPTGKFVIGGPHGDAGLTGRKIIVDTYGGFGRHGGGAFSGKDPSKVDRSACYMCRYIAKNLVAAGLTDRCEVQLAYAIGVAEPVSLYVNTFGTNKIPESQIEDLVRKNFDMKPSGIISQLDLKRPIYKKTASYGHFGRNEPEFGWEKTNKVDVLKQGAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0K8</accession>
    <name>A0A087S0K8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADH dehydrogenase protein</fullName>
            <ecNumber evidence="2">1.6.5.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.3" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19262">
        <property type="protein sequence ID" value="KFM19262"/>
        <property type="gene ID" value="AAA799P11_00780"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.751"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="1">
        <location>
            <begin position="7"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="289" mass="33006" checksum="2C35EA633541E449" modified="2014-10-29" version="1">MEKSLQIVITGASGFVAKNLRKYLSENNVHLISISRKNFKSFKNETKIISKNYDQKSLLPKIKNSDALIHLVGIGKQSVKTDYESINFRLTQKIVNLSKKAKIKKIIYTSGLGASSDTSLGYFISKFKAEQSIIDSKINYAIFRPSYIVGKNDLFTRYLKKSIKKNKIIVPGSGKYFIQPIFINDVTKLIFQSIVDKKFNNKIIDLVGPEIISFEKYIQLFLQKKKTKLCYMNIEKAYHLAITDSKFDYGVDDLNILVGNFVGDYKKLKNLSKMDFQSVKELLKTGALF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S112</accession>
    <name>A0A087S112_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp</name>
        <name evidence="5" type="ORF">AAA799P11_00740</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19416">
        <property type="protein sequence ID" value="KFM19416"/>
        <property type="gene ID" value="AAA799P11_00740"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.713"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="3"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="147" mass="16632" checksum="D1B96D129535AB69" modified="2014-10-29" version="1">MNLDKTDEKILKNLMVDARLSARQLALKLGMSTVTVLSRIKKMEKEKIINGYTAIIDHEKLGYSLTAIIEIIAKNDKMVDIEEEISKFENVCGVYDITGSTDTIIIAKFKERNELSKFVKEIASIPNVENTITHVVLNTAKEDFRLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S117</accession>
    <name>A0A087S117_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Site-specific DNA-methyltransferase (adenine-specific)</fullName>
            <ecNumber evidence="2">2.1.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hsdM</name>
        <name evidence="5" type="ORF">AAA799P11_00745</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyadenosine in DNA + S-adenosyl-L-methionine = an N(6)-methyl-2'-deoxyadenosine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:15197"/>
            <dbReference type="Rhea" id="RHEA-COMP:12418"/>
            <dbReference type="Rhea" id="RHEA-COMP:12419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90615"/>
            <dbReference type="ChEBI" id="CHEBI:90616"/>
            <dbReference type="EC" id="2.1.1.72"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.72" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19421">
        <property type="protein sequence ID" value="KFM19421"/>
        <property type="gene ID" value="AAA799P11_00745"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.718"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022749">
        <property type="entry name" value="D12N6_MeTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003356">
        <property type="entry name" value="DNA_methylase_A-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004546">
        <property type="entry name" value="Restrct_endonuc_T1M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038333">
        <property type="entry name" value="T1MK-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12161">
        <property type="entry name" value="HsdM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02384">
        <property type="entry name" value="N6_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00497">
        <property type="entry name" value="hsdM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HsdM_N" evidence="4">
        <location>
            <begin position="10"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="N6_Mtase" evidence="3">
        <location>
            <begin position="147"/>
            <end position="466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="502" mass="57040" checksum="1980EC2B3C2CBD5F" modified="2014-10-29" version="1">MSDKITLEALKAHLWKASDILRGSLDAQEYRQPVMTILFLKRLNDTFEENVTKLVAEGNSPKKAEQKFRHKFFVPDTARWSVLSEASSNLGEIIDNVCRDIEKEVPTLEGVLTNTKYNDKKKYPDDKLRKLVAHFNELPLQNKNLEKEDLFGDAYEYLLETFADETKKKGGEFFTPREIVQLLVNITKPKEAMKISDPTCGSGGMLVVSRRYVADHKGDVNNLVLEGQESNYGNLGMCKMNLVLHGLEDFGIEYGDTLADPKLVESGKLKQYDRVLANFPFSMDWDNGSASKDPYNRFAYGIPPAKDKADYAFILHMLASLNEKGQAGIVCSQGVLFRGGEEGKIRKNMILGDKENNLQGDCIEAIIALPQKMFWGTSIPACIMVLNKNKPAKRKNKILFIYGAKDFAEGKNRNKLREEDIKKIVTAFDKFEDIDKYCHVADITELKENEFNLNVPRYVDISEPEEEIDIQEAYDSLKESYSEQDKLRKLVEADLKGLNIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S119</accession>
    <name>A0A087S119_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative type-1 restriction enzyme MjaXP specificity protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00747</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type-I restriction system S methylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19423">
        <property type="protein sequence ID" value="KFM19423"/>
        <property type="gene ID" value="AAA799P11_00747"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.720"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.220.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000055">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044946">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01420">
        <property type="entry name" value="Methylase_S"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0680">Restriction system</keyword>
    <feature type="domain" description="Methylase_S" evidence="4">
        <location>
            <begin position="24"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Methylase_S" evidence="4">
        <location>
            <begin position="232"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="437" mass="49595" checksum="504BB8C9539333CD" modified="2014-10-29" version="1">MSLVTPKKGYKSVPWLFGKKIEIPDEWEVKSIKELGEIVTGNTPDTTNNEYYHSDFLWASPIDLQKEKYVKQTNVMVSKKGFSISRKIPKDSVLVVCIGSTIGKIGIASVEMSTNQQINSIICNENDSHFIYYQLLHNNYLIKNIANQSAIPILNKTEFGKLKLFIPTKITEQQKIATILSNVDNLIESTGMVITNSKKVKKGLMQKLLTQGIGHTKFKKVPWLFGKDIEIPEEWEVKKTDDIFDFLISGTNARSDLNDVGEIHYIHYGDIHTKWNNELNFDSEKTPRIDKEKVSRLPLLKEGDLIIADASEDVEGSGTSISLKNIKNKKIVAGLHTLVLRRKDETISFEFMKYLTSISYVKIQITSWVTGAKVFGLNKKSCKEIKVPLPPLSEQQKIATILSNIDSKIESQEQYKENLQKLKKSLMQKLLTGEVRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S133</accession>
    <name>A0A087S133_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00761</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19437">
        <property type="protein sequence ID" value="KFM19437"/>
        <property type="gene ID" value="AAA799P11_00761"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.734"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="96" mass="10918" checksum="27B076747681AAC4" modified="2014-10-29" version="1">MGDGIGGAVINILTNNAFELLISHTRKDNQEEYGKVEKIIMSKVDNPDQPQYEEKTKEDLERALKGKFVSCNVQYRDKKTDALICNVFVQRPPEGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S145</accession>
    <name>A0A087S145_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">O-methyltransferase MdmC protein</fullName>
            <ecNumber evidence="4">2.1.1.104</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mdmC</name>
        <name evidence="4" type="ORF">AAA799P11_00773</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.104" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19449">
        <property type="protein sequence ID" value="KFM19449"/>
        <property type="gene ID" value="AAA799P11_00773"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.746"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042409">
        <property type="term" value="F:caffeoyl-CoA O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002935">
        <property type="entry name" value="SAM_O-MeTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01596">
        <property type="entry name" value="Methyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51682">
        <property type="entry name" value="SAM_OMT_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="205" mass="23475" checksum="E68B25F33BFB18D4" modified="2014-10-29" version="1">MKTVIFEVLEKLENQSVLEKSRKVDVPADERMLAITKETGEILNMIIRIKNAKNMLEVGMSVGYSTLWCAEAITENDGKIITIEQNPKKIKRAKENFQNANVSDAITIKEGLAMQILREFNLQEKYKEFFDFVLIDADKENVIEYFDMILPLVTVGGVIVTDNILYPEKYREDMKKYSAHIRATPNVRTITSPIGNGEEITIKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S193</accession>
    <name>A0A087S193_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00688</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19497">
        <property type="protein sequence ID" value="KFM19497"/>
        <property type="gene ID" value="AAA799P11_00688"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="43" mass="4761" checksum="4ABF10C022D44717" modified="2014-10-29" version="1">MKAKFATSCVSCGDKIQPGKEISKNKDEKWVHKHCAEDSEGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B6</accession>
    <name>A0A087S1B6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15">Fructose-1,6-bisphosphate aldolase/phosphatase</fullName>
            <shortName evidence="15">FBP A/P</shortName>
            <shortName evidence="15">FBP aldolase/phosphatase</shortName>
            <ecNumber evidence="6 15">3.1.3.11</ecNumber>
            <ecNumber evidence="15">4.1.2.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">fbp</name>
        <name evidence="17" type="ORF">AAA799P11_00721</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:14729"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.1.2.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 15">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 15">Homooctamer; dimer of tetramers.</text>
    </comment>
    <comment type="domain">
        <text evidence="15">Consists of a single catalytic domain, but remodels its active-site architecture via a large structural change to exhibit dual activities.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 15">Belongs to the FBP aldolase/phosphatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.11" evidence="6 15"/>
    <dbReference type="EC" id="4.1.2.13" evidence="15"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19520">
        <property type="protein sequence ID" value="KFM19520"/>
        <property type="gene ID" value="AAA799P11_00721"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.692"/>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042132">
        <property type="term" value="F:fructose 1,6-bisphosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004332">
        <property type="term" value="F:fructose-bisphosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02067">
        <property type="entry name" value="FBP_aldolase_phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002803">
        <property type="entry name" value="FBPase_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036076">
        <property type="entry name" value="FBPase_V_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38341">
        <property type="entry name" value="PTHR38341"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01950">
        <property type="entry name" value="FBPase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015647">
        <property type="entry name" value="FBPtase_archl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111249">
        <property type="entry name" value="SSF111249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 15" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="8 15" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="10 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12 15" id="KW-0456">Lyase</keyword>
    <keyword evidence="11 15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13 15" id="KW-0704">Schiff base</keyword>
    <feature type="region of interest" description="FBP binding" evidence="15">
        <location>
            <begin position="101"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="FBP binding; shared with dimeric partner" evidence="15">
        <location>
            <begin position="238"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="358"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for FBP phosphatase activity" evidence="15">
        <location>
            <position position="11"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor; for FBP aldolase activity" evidence="15">
        <location>
            <position position="225"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with DHAP; for FBP aldolase activity" evidence="15">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="18"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>dihydroxyacetone phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="228"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="229"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>dihydroxyacetone phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="KFM19520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="378" mass="41448" checksum="E0D97059AB9F5A59" modified="2014-10-29" version="1">MKITVSVIKADVGGVGGHTKPSDGLLDAIRNTVKNSADLLIDYYIGYCGDDTHIVMSHTHGVDNQQIHKLAWDAFMAGTQVAKDEGLYGAGQDLLKDSFSGNVKGMGPGVAEMEFEERPNEAFTVFAADKTEPGAFNYPIYRMFVDALSNTGLIVNKNLASGVKMNIMDVEKAQIAELELWEDKPTIEAALMYPGRYVVDSVTTKDGEPILAASTDRLHNIAGTYVGKDDPICVVRTQKKFPATEEVGSVFNNPHFVAGNTRGSHNMPLMPVKLNSAATINFCIPIVEALVFSMHNGKFTGPFDGFSTPDWDLIRERATEKAMAIRSQGFIHPATLVPSELEYAEGYRARMDVLESKMKSMEETTSSSDRKENYEDPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E8</accession>
    <name>A0A087S1E8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00541</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19552">
        <property type="protein sequence ID" value="KFM19552"/>
        <property type="gene ID" value="AAA799P11_00541"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="59" mass="7248" checksum="E3CABB4B7EEBF6FB" modified="2014-10-29" version="1">MENFFEPEKSYLSCEKNIKKYLESISDSQLKNFFDNLEYTPFPILLMKEYKKRFRTPNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E9</accession>
    <name>A0A087S1E9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator protein-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00542</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19553">
        <property type="protein sequence ID" value="KFM19553"/>
        <property type="gene ID" value="AAA799P11_00542"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.525"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="264" mass="31134" checksum="7421C8C197F498E2" modified="2014-10-29" version="1">MDFEETSAEFLELASEVRLRILFDLLEKPARLTTLSKRYKVSPQEIHRNFERMVNSNLVSKQENNFYSLTTFGKAICTQIHSFSYLSQNKDYFKTHNFETLPPKFLRRIGDLNNSQEIVGVSKVLESWKKIYKTADDFIFNVLSETPLELMDLVVKRVKRGTKYRHIISENASIPKGRRNLLEKSGFYDLLNSEKIERRMLKSVNISVILNEHSAGLMFPDSSGSPDLRTMFYSDDEYFREWCLDYFKHCWNVSDPFKEFKLKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F0</accession>
    <name>A0A087S1F0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ectoine hydroxylase protein</fullName>
            <ecNumber evidence="5">1.14.11.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ectD</name>
        <name evidence="5" type="ORF">AAA799P11_00543</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.-" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19554">
        <property type="protein sequence ID" value="KFM19554"/>
        <property type="gene ID" value="AAA799P11_00543"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.527"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016706">
        <property type="term" value="F:2-oxoglutarate-dependent dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012774">
        <property type="entry name" value="EctD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008775">
        <property type="entry name" value="Phytyl_CoA_dOase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05721">
        <property type="entry name" value="PhyH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02408">
        <property type="entry name" value="ectoine_ThpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="304" mass="34547" checksum="55332EFC16E2FE31" modified="2014-10-29" version="1">MSQSNTEMDFYPTRLNSESKIISRTDPVVYPSSFSSLSEEQEKFFENNGYLIFENLFTTDEVSALFEELKSLSEDSSKKDLPQFILEESNKEVRSIFEIHKLSEIYSRLCRDKRIVNTAQHLLGSKVYIHQSRVNLKPGFDGKEFYWHSDFETWHSEDGMPNMRAVSCSISLTKNYEFNGPLMVIPGSHKEFVSCSGKTPENHYIQSLKKQEIGTPDKALLEKMVEKGGIVSAKGDAGSAIFFDCNIMHGSNGNITPYPRSNAFFVFNSVNNSLTEPFCGLSPRPNYIGSRDFTPLEPIETFLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F2</accession>
    <name>A0A087S1F2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Diaminobutyrate--2-oxoglutarate transaminase protein</fullName>
            <ecNumber evidence="4">2.6.1.76</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ectB</name>
        <name evidence="4" type="ORF">AAA799P11_00545</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.76" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19556">
        <property type="protein sequence ID" value="KFM19556"/>
        <property type="gene ID" value="AAA799P11_00545"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.529"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045303">
        <property type="term" value="F:diaminobutyrate-2-oxoglutarate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047307">
        <property type="term" value="F:diaminobutyrate-pyruvate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019491">
        <property type="term" value="P:ectoine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004637">
        <property type="entry name" value="Dat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012773">
        <property type="entry name" value="Ectoine_EctB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43552">
        <property type="entry name" value="PTHR43552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43552:SF2">
        <property type="entry name" value="PTHR43552:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00709">
        <property type="entry name" value="dat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02407">
        <property type="entry name" value="ectoine_ectB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="431" mass="47728" checksum="92E1A3EDDCB8D55F" modified="2014-10-29" version="1">MNKINSLESKVRSYCRAYPVMFTKAKNSHLIDKDGKKYLDFLCGAGSLNYGHNNPDLKNKVIDYLNQDGIIHSLDLATESKEEFLDSFSKNILSPRNLDYKIQFTGPTGTNAVEAALKIARKVTGRTKIISFTNGFHGVTLGSVAATGNKHHRGGAGISLNDVMFMPFDGYMGKKLDTIDYLRRLLEDNSSGIDLPAAVILETVQGEGGINIASSKWLQSLQELCREFGILIIVDDIQVGCGRTGTFFSFEGMGITPDLVVLSKSLSGFGLPFSLLLLKPELDKWKPGEHNGTFRGNNLAFVTAKTAIEQYWTTDELEKQIILNSKILQTRLEEISKEFPSSDIQVRGKGMIYGIDCILGDFASEIRQKCFENGLILETCGADDQVVKLLPPLNIYEDDLMLGLDILETSIKQVISESDFDKLLEAEVIQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F4</accession>
    <name>A0A087S1F4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00547</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19558">
        <property type="protein sequence ID" value="KFM19558"/>
        <property type="gene ID" value="AAA799P11_00547"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.531"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="125" mass="13716" checksum="FE08213D271D0D10" modified="2014-10-29" version="1">MTTTESMVKNLINTFEKDGLQVIQANCSGFENPTEVEGVEPDVIWWNPHKELYHVGVVADSQSISSDLIKQKILTLSKLMMGKGSSEGERLPFVIGIPPEASNVVDKTLSENNISSQGNTQKIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1G2</accession>
    <name>A0A087S1G2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitroreductase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19566">
        <property type="protein sequence ID" value="KFM19566"/>
        <property type="gene ID" value="AAA799P11_00555"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="77"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="195" mass="21852" checksum="AAE5C0379DBAD59F" modified="2014-10-29" version="1">MATSAPPRDGIGEVWINTQFETSQGNANYGSSTAVDTTTWQVTKKVFGNGADNMNHPHNMWTNTENSMIYQTQWFDNKLSSLDRDAAVLVVVVSKSKAEHKEADYPTHAFDTGSAWENLAIESVSRGFVTHAMAGFDYEKARSELEIPDVFEVMAMFAIGKQGPKENLPQELQEREKPADRKELSEIIMEGKFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H6</accession>
    <name>A0A087S1H6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alpha-aminoadipate--LysW ligase LysX protein</fullName>
            <ecNumber evidence="6">6.3.2.n4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00569</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RimK family. LysX subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.n4" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19580">
        <property type="protein sequence ID" value="KFM19580"/>
        <property type="gene ID" value="AAA799P11_00569"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.553"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009085">
        <property type="term" value="P:lysine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013651">
        <property type="entry name" value="ATP-grasp_RimK-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011870">
        <property type="entry name" value="LysX_arch"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004666">
        <property type="entry name" value="RpS6_RimK/Lys_biosynth_LsyX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08443">
        <property type="entry name" value="RimK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02144">
        <property type="entry name" value="LysX_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00768">
        <property type="entry name" value="rimK_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="5">
        <location>
            <begin position="31"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="218" mass="24154" checksum="F80A9461D9725F11" modified="2014-10-29" version="1">MHSTAALEGLGVKVINCLNTGIFAGNKLFTHMLLKKAGVPTPDATVAFSKDSALQALDTQGYPKIIKPTVGSWGRLISKLNDKDSAEGIIESRENMYPIYQVHYLEEFVKRPPRDIRAIMVGDKIVAAIYRNSEHWKTNMALGGVAEPCKVTQEMEEMCIKAKKAVQGDIVGVDLMESEEKGLVVHEVNNTTEYKNTVRVCEVDIPSLMLDYALKIDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L4</accession>
    <name>A0A087S1L4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative dihydroorotate dehydrogenase B electron transfer subunit protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pyrK</name>
        <name evidence="4" type="ORF">AAA799P11_00607</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="2">Binds 1 [2Fe-2S] cluster per subunit.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19618">
        <property type="protein sequence ID" value="KFM19618"/>
        <property type="gene ID" value="AAA799P11_00607"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.594"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006221">
        <property type="term" value="P:pyrimidine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012165">
        <property type="entry name" value="Cyt_c3_hydrogenase_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019480">
        <property type="entry name" value="Dihydroorotate_DH_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10418">
        <property type="entry name" value="DHODB_Fe-S_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006816">
        <property type="entry name" value="Cyc3_hyd_g"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="1 2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="3">
        <location>
            <begin position="8"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="233"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR006816-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="272" mass="29882" checksum="2A27A5C7C720BA59" modified="2014-10-29" version="1">MVLQRNHNHTTIVTVEKVIDETPTVRTLVFSDEVMSNVLPGQFAMVWIPGINELPMSVMISDESGKAAFTVRKHGAASTGLFNVKVGEQIGIRGPYGNSFDLKEGKLLLVGGGTGLVPMMRLLTHVKPTDDVTVLIGAKSKDEVFFEDLANRLLKNNPHKVIVSTDDGSYGEKGFVTDLVEKHVDQTKYDGVYVCGPEIMMYKTVQSAHSRGIFVQASLERMMKCGVGICGSCCMGEDLVCKDGTVFDGKHLSQNQEFGKYHRNKAGFLENY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L9</accession>
    <name>A0A087S1L9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Ribonuclease HII</fullName>
            <shortName evidence="10">RNase HII</shortName>
            <ecNumber evidence="10">3.1.26.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">rnhB</name>
        <name evidence="13" type="ORF">AAA799P11_00612</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 10 11">Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10 11">
            <text>Endonucleolytic cleavage to 5'-phosphomonoester.</text>
            <dbReference type="EC" id="3.1.26.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 10 11">Belongs to the RNase HII family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.4" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19623">
        <property type="protein sequence ID" value="KFM19623"/>
        <property type="gene ID" value="AAA799P11_00612"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.599"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006401">
        <property type="term" value="P:RNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00052_A">
        <property type="entry name" value="RNase_HII_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004649">
        <property type="entry name" value="RNase_H2_suA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001352">
        <property type="entry name" value="RNase_HII/HIII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024567">
        <property type="entry name" value="RNase_HII/HIII_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020787">
        <property type="entry name" value="RNase_HII_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023160">
        <property type="entry name" value="RNase_HII_hlx-loop-hlx_cap_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10954">
        <property type="entry name" value="PTHR10954"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01351">
        <property type="entry name" value="RNase_HII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00729">
        <property type="entry name" value="TIGR00729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 10 11" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="9 10 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="7 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10 11" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase_HII" evidence="12">
        <location>
            <begin position="4"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="7"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM19623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="205" mass="23175" checksum="6B5D8AF1223B90D6" modified="2014-10-29" version="1">MRVCGVDDAGRGSMLGPLVISGISIDKRKLRKLSSLGVKDSKKLSPKNRELLYKKIIKLVDDYYITKIPPRSIDASVKRHGLNELEAKYMAKVVSKLNPDTSYVDSCDVNPKRFGKEISKLSDNHKIKSYHHADSRFVIVSAASILAKVTRDRAIKKLSKNHDLGSGYPSDLKTVKFVTRYYKTNHSLPTFVRKSWKPVQKIMNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N0</accession>
    <name>A0A087S1N0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00623</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19634">
        <property type="protein sequence ID" value="KFM19634"/>
        <property type="gene ID" value="AAA799P11_00623"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.609"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="15107" checksum="6EEBFDDD9612267B" modified="2014-10-29" version="1">MDTETCKHQPVYFGVVNINIDERTIGSVDVWRCGVCKKRFCEEKQLGIEELADLVGMPKIDPDAKWGVTVCKLQQGKYKWKLVKLKENGEIKHECLDEKIIPLKVKDYKVEDEKHWSFLIDDNINKAVEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N8</accession>
    <name>A0A087S1N8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00631</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19642">
        <property type="protein sequence ID" value="KFM19642"/>
        <property type="gene ID" value="AAA799P11_00631"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.617"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007355">
        <property type="entry name" value="DUF424"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04242">
        <property type="entry name" value="DUF424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="98" mass="10814" checksum="BB117A1E4BD37041" modified="2014-10-29" version="1">MPFAVRQTDYQKNPMLSICDAELLGKTIVEGELNMHISESYYGERFVEKDEAQTLLKNSAIINMVGDETVSLSIGLGIGSENGIKKISGVPFLIVFKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q6</accession>
    <name>A0A087S1Q6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sulfur carrier protein ThiS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00649</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CGI121/TPRKB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19660">
        <property type="protein sequence ID" value="KFM19660"/>
        <property type="gene ID" value="AAA799P11_00649"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.635"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013926">
        <property type="entry name" value="CGI121/TPRKB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036504">
        <property type="entry name" value="CGI121/TPRKB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08617">
        <property type="entry name" value="CGI-121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143870">
        <property type="entry name" value="SSF143870"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="SSF54285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="257" mass="28257" checksum="78C96FC722B655BA" modified="2014-10-29" version="1">MITVKLVGGAKKSFSTDKLQIEKSDITIAELVDLLLQLKPDDSPKLDTENVLVAVNGVDSSAMDGKSTIIKNNDVVSIIPVIHGGASKKMLYKVSSKQIHIVQIKGQKSIDVKFLDVLRKKYPKIILQAVSSEFVLNGSHLKKILSLSLESQKNDVLLSNKLETDILMRFALTKQISAAIASAGIKTKTDFILVAIGNKTNLDSLYKELSSQCVPLFSKNNEEFLKKSFKISKKQLDSVYSKTPLEDILVEKAAVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R9</accession>
    <name>A0A087S1R9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-RNA-binding protein Alba</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">albA</name>
        <name evidence="2" type="ORF">AAA799P11_00662</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19673">
        <property type="protein sequence ID" value="KFM19673"/>
        <property type="gene ID" value="AAA799P11_00662"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.650"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036882">
        <property type="entry name" value="Alba-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002775">
        <property type="entry name" value="DNA/RNA-bd_Alba-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01918">
        <property type="entry name" value="Alba"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82704">
        <property type="entry name" value="SSF82704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alba" evidence="1">
        <location>
            <begin position="8"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="10161" checksum="66CB66FFD041EB89" modified="2014-10-29" version="1">MLDNKTDTIFIGKKPLMSYVTSAIIQLATLDKITIKARGHSIGLAVDVTQVLLKKTDAFEVGCVNINSESLESQDGRNRDVSTIEIPISKRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1V5</accession>
    <name>A0A087S1V5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00449</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19709">
        <property type="protein sequence ID" value="KFM19709"/>
        <property type="gene ID" value="AAA799P11_00449"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="73" mass="8579" checksum="80CD90C9CACE74C3" modified="2014-10-29" version="1">MANVCKGICIRYKAIGYKGRHRYEDGQKRCPVCEEFLRHSGVRCPCCNVKLRSTPRGNRARKEIHEKRNCVWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S212</accession>
    <name>A0A087S212_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Arginine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Arginyl-tRNA synthetase</fullName>
            <shortName evidence="8">ArgRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">argS</name>
        <name evidence="12" type="ORF">AAA799P11_00511</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg)</text>
            <dbReference type="Rhea" id="RHEA:20301"/>
            <dbReference type="Rhea" id="RHEA-COMP:9658"/>
            <dbReference type="Rhea" id="RHEA-COMP:9673"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78513"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.19"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.19" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19766">
        <property type="protein sequence ID" value="KFM19766"/>
        <property type="gene ID" value="AAA799P11_00511"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.493"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004814">
        <property type="term" value="F:arginine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006420">
        <property type="term" value="P:arginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00123">
        <property type="entry name" value="Arg_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001278">
        <property type="entry name" value="Arg-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005148">
        <property type="entry name" value="Arg-tRNA-synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036695">
        <property type="entry name" value="Arg-tRNA-synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035684">
        <property type="entry name" value="ArgRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008909">
        <property type="entry name" value="DALR_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11956">
        <property type="entry name" value="PTHR11956"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03485">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05746">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00750">
        <property type="entry name" value="tRNA-synt_1d"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01038">
        <property type="entry name" value="TRNASYNTHARG"/>
    </dbReference>
    <dbReference type="SMART" id="SM01016">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00836">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55190">
        <property type="entry name" value="SSF55190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arg_tRNA_synt_N" evidence="11">
        <location>
            <begin position="4"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="DALR_1" evidence="10">
        <location>
            <begin position="512"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="126"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM19766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="628" mass="70703" checksum="8A99B9CAB3870BC0" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S227</accession>
    <name>A0A087S227_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inosine-5'-monophosphate dehydrogenase protein</fullName>
            <ecNumber evidence="3">2.7.7.72</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00526</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.72" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19781">
        <property type="protein sequence ID" value="KFM19781"/>
        <property type="gene ID" value="AAA799P11_00526"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.508"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052929">
        <property type="term" value="F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052928">
        <property type="term" value="F:CTP:3'-cytidine-tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052927">
        <property type="term" value="F:CTP:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016437">
        <property type="term" value="F:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="11"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="76"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="141"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="233"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="284" mass="31784" checksum="3F76968C6E947148" modified="2014-10-29" version="1">MNIKKSNLTKILTKPITVGPNSTLVKVRESLLKNKVKRVVVVDKKKPIAVITEKDIAKKIYELGSKPIKSVLAKNFKPKKLFTLTRKNTVKECAKMMKKHRISVVIILNEDKTLGGIVTKTDLVKIFLTKGSESLKVSQVMKKKNLVTASPSDPILHIESLLLKYGISRVIIKRNQKPVGIITFRDFVPAKIPQWIAESADPKEVQEYKFKKGLEEHVNQMSYLFPFHATDIMASKPITIEADKEIRAAITLMIKHDISGLPVVKNSKLVGIITKSDIVSVLAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S293</accession>
    <name>A0A087S293_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphoribosylglycinamide formyltransferase 1 protein</fullName>
            <ecNumber evidence="2">2.1.2.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00376</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19847">
        <property type="protein sequence ID" value="KFM19847"/>
        <property type="gene ID" value="AAA799P11_00376"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.365"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004644">
        <property type="term" value="F:phosphoribosylglycinamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011542">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01981">
        <property type="entry name" value="sufD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SufBD_N" evidence="1">
        <location>
            <begin position="100"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="465" mass="52395" checksum="77C5B6613EB25CEA" modified="2014-10-29" version="1">MSQTLSKLDTSHIDEISSSYNEPGWLKDYRKDSLSVYDSLPIELSPLYNKYTDAKKMDPEKVSLSASTAQTTPSFLQKRLGELENEICVIQIGTHITKINLPEDLKSKGLVISSISDAIANNSELVKKALEASKSQDDKFTALNNAAFNSGIFIHIPRNLILEKPIHFLSCLSDDGLSVISRNIIFADESSKATVVQELYSPKSDSQQAYLELLNTNVAANAQLDVTTLQMIDQHAVNFSTRRTDLAQDAKINWYSGLFGSMLSRYKIDYFLNGTGASSNDSEVVFGNNEQSFDIQTNVNHESPATEGRVVEKSILRNKSKSLFKGMIRIKENAVKSNSFLSGRSILLDKDAKSDAIPGLEIFTNDVKATHSASVAQIDEEQVFYLKTRCLSHEEAERTIVEGFLEPLSRKMSYQVRAWIAYLIESKWENRELTVNTDEELTKFVEVEETRYNEDAEIEQHYKYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S297</accession>
    <name>A0A087S297_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19851">
        <property type="protein sequence ID" value="KFM19851"/>
        <property type="gene ID" value="AAA799P11_00380"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.369"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="114" mass="12970" checksum="5983FFD0E6ACD8A6" modified="2014-10-29" version="1">MSFTPEIPVELQIRKIIFEKFNEVDTIFTNDSIFEILKTDGDINPSWIIDDLEPFINDLCDSGLARNVAQNFTTIHLKLFDAVEKLHCNACNQDIFLGKSEDRVCPNSSCKSTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A1</accession>
    <name>A0A087S2A1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00384</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19855">
        <property type="protein sequence ID" value="KFM19855"/>
        <property type="gene ID" value="AAA799P11_00384"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.373"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="158"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="218"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="51"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="177"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="257" mass="29266" checksum="D91DA789AF116FBE" modified="2014-10-29" version="1">MFESLASLEKTVLQLRKKQQEATKLRKKAEKQLKEVLSAQRRSSSGLNSIDKKIETEKEDVSDVSDVLNQKNSQLASIERLVQAAEERLSREKEAIEQTEQEIEFSETPEEKQYAESRLRSLRDHVEELTSEIKSRQKTAKKIAEDVAKYDNIKSKISTKIQKQSKSKPSLRETMASSKKAAEKFVKEVERRTKSEESAKKALAKASAKLKELLAKRKTAAKKKATKKKPARKTAAKKKATKKKPARKTAAKKTRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A3</accession>
    <name>A0A087S2A3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00386</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19857">
        <property type="protein sequence ID" value="KFM19857"/>
        <property type="gene ID" value="AAA799P11_00386"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.375"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="104" mass="11221" checksum="3CE157F3DF0A01F2" modified="2014-10-29" version="1">MAEYIPISQVKKMRSGINAKAEVKSKGDPRTVNLKSGGTVDVCDAVIADGETEDDQMKLTLWGDDIKAVNVGDVVVITNGYTNEFKGEVSLTKGKFGQMEVNPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A9</accession>
    <name>A0A087S2A9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Precorrin-2 dehydrogenase</fullName>
            <ecNumber evidence="3">1.3.1.76</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00397</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>NAD(+) + precorrin-2 = 2 H(+) + NADH + sirohydrochlorin</text>
            <dbReference type="Rhea" id="RHEA:15613"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58351"/>
            <dbReference type="ChEBI" id="CHEBI:58827"/>
            <dbReference type="EC" id="1.3.1.76"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; siroheme biosynthesis; sirohydrochlorin from precorrin-2: step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.76" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19863">
        <property type="protein sequence ID" value="KFM19863"/>
        <property type="gene ID" value="AAA799P11_00397"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.382"/>
    <dbReference type="UniPathway" id="UPA00262">
        <property type="reaction ID" value="UER00222"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004325">
        <property type="term" value="F:ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043115">
        <property type="term" value="F:precorrin-2 dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019354">
        <property type="term" value="P:siroheme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028161">
        <property type="entry name" value="Met8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006367">
        <property type="entry name" value="Sirohaem_synthase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35330">
        <property type="entry name" value="PTHR35330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01470">
        <property type="entry name" value="cysG_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="217" mass="24569" checksum="EC79E65937ECC34E" modified="2014-10-29" version="1">MIVDLNLQEKSAIVIGGGNEAQKRINSLMNQECNVTVISDKVTPQITKLAKLKKIQLKKQKIQDTKFISEFKPDIIITTTNDKKLNQKIISAGKKKKIITYSSDNPEESDFSNPAIIDFEKMIQIAIFTGGRSPAMSKKLKKKSEQVFKKIITKEDINQIKIQKIARNAAKEKIATPAERKACLRSIMADNEIDQLIKDGQMKKAEKRAITIVRNWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M1</accession>
    <name>A0A087S2M1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent dethiobiotin synthetase BioD</fullName>
            <ecNumber evidence="5">6.3.3.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">DTB synthetase</fullName>
            <shortName evidence="5">DTBS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Dethiobiotin synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">bioD</name>
        <name evidence="6" type="ORF">AAA799P11_00279</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>(7R,8S)-7,8-diammoniononanoate + ATP + CO2 = (4R,5S)-dethiobiotin + ADP + 3 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15805"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:149469"/>
            <dbReference type="ChEBI" id="CHEBI:149473"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.3.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Cofactor biosynthesis; biotin biosynthesis; biotin from 7,8-diaminononanoate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the dethiobiotin synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.3.3" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19975">
        <property type="protein sequence ID" value="KFM19975"/>
        <property type="gene ID" value="AAA799P11_00279"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.272"/>
    <dbReference type="UniPathway" id="UPA00078">
        <property type="reaction ID" value="UER00161"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004141">
        <property type="term" value="F:dethiobiotin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009102">
        <property type="term" value="P:biotin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00336">
        <property type="entry name" value="BioD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004472">
        <property type="entry name" value="DTB_synth_BioD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43210">
        <property type="entry name" value="PTHR43210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006755">
        <property type="entry name" value="DTB_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00347">
        <property type="entry name" value="bioD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0093">Biotin biosynthesis</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="5">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="20"/>
            <end position="25"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="122"/>
            <end position="125"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="182"/>
            <end position="183"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="211"/>
            <end position="213"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="236" mass="26374" checksum="9AD753F8CC730DC1" modified="2014-10-29" version="1">MDYSKKYLLKSVFITGTDTDVGKTYITAGLAVALRKMDVDVGVMKPFAAGTAQKKGYKSEDVEILAKAAQTSDPENLVNPQFFPISASPYTAWKNLKTKPKISAILSNFKKLSKLHEMILVEGMGGIMTPILKNYYITNLIKEMKIPTVIVTRSKVGTVNHTIMTIQMCQKYKIPIKGIIINDFDDDGYSVKNLKRDLQNLTDVKVLGSIPFIKDMSDASLNRIFKKNIDLKTLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P2</accession>
    <name>A0A087S2P2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">N5-carboxyaminoimidazole ribonucleotide synthase</fullName>
            <shortName evidence="3 5">N5-CAIR synthase</shortName>
            <ecNumber evidence="3 5">6.3.4.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3 5">5-(carboxyamino)imidazole ribonucleotide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5 7" type="primary">purK</name>
        <name evidence="7" type="ORF">AAA799P11_00300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).</text>
    </comment>
    <comment type="function">
        <text evidence="5">Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 5">
            <text>5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + ATP + hydrogencarbonate = 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19317"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58730"/>
            <dbReference type="ChEBI" id="CHEBI:137981"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 5">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate from 5-amino-1-(5-phospho-D-ribosyl)imidazole (N5-CAIR route): step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the PurK/PurT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.18" evidence="3 5"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19996">
        <property type="protein sequence ID" value="KFM19996"/>
        <property type="gene ID" value="AAA799P11_00300"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.294"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034028">
        <property type="term" value="F:5-(carboxyamino)imidazole ribonucleotide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004638">
        <property type="term" value="F:phosphoribosylaminoimidazole carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01928">
        <property type="entry name" value="PurK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003135">
        <property type="entry name" value="ATP-grasp_carboxylate-amine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005875">
        <property type="entry name" value="PurK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040686">
        <property type="entry name" value="PurK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02222">
        <property type="entry name" value="ATP-grasp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17769">
        <property type="entry name" value="PurK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01161">
        <property type="entry name" value="purK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 4 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 3 5" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="6">
        <location>
            <begin position="108"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="179"/>
            <end position="182"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="264"/>
            <end position="265"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="380" mass="42522" checksum="A2DE21448F60DF06" modified="2014-10-29" version="1">MAKVLGIIGGGQLGMMIAEAAKKMPENVSKIIVLDPTENCPAAQVGAEQIIADFKDKDAIVELSEKSDIITYEIESGDSDVLKSVEKNAEINPSPETLHTIQDKFLQKTFLKEHNIPVPEFIEISNIDDVKEGLKKFGYPALLKARRDAYDGRGNFKVDSEDMIQTAYEYFKGQKLMLEKFVPFKMEVSVIAARNTKGQIKTFPLVENIHEENILRETIAPARVSEEITKNAEKIANQTMDVLKGAGVFGIEMFVTQDDQIVINEIAPRVHNSGHHTLQSSETSQFEQHLRAILGLELGSTKLLRPTIMYNILGTKTFQGEYKSLEIPEDNLFLKMYGKKVSKPMRKLGHFNIIATDNESIDDLLTKLESLKPRAVVQSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S6</accession>
    <name>A0A087S2S6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20030">
        <property type="protein sequence ID" value="KFM20030"/>
        <property type="gene ID" value="AAA799P11_00335"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.329"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="79" mass="8830" checksum="DEF12ACE7380EB4F" modified="2014-10-29" version="1">MRALCLITVKPGKVDPVVQILKKKRKVVKQVMVVTGRADISVLLQGGIEDINNMVIDFKKIKDIVTTETLIEVEVNLGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T8</accession>
    <name>A0A087S2T8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Preflagellin peptidase protein</fullName>
            <ecNumber evidence="3">3.4.23.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">flaK</name>
        <name evidence="3" type="ORF">AAA799P11_00352</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.23.52" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20042">
        <property type="protein sequence ID" value="KFM20042"/>
        <property type="gene ID" value="AAA799P11_00352"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.341"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009655">
        <property type="entry name" value="Preflagellin_peptidase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06847">
        <property type="entry name" value="Arc_PepC_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0966">Cell projection</keyword>
    <keyword evidence="3" id="KW-0969">Cilium</keyword>
    <keyword evidence="3" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="domain" description="Arc_PepC_II" evidence="2">
        <location>
            <begin position="162"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="214" mass="23817" checksum="96D5E2BF4A33F4A8" modified="2014-10-29" version="1">MLAIGGFFDIWKREVHDYVWVIFGSAGAMLLLFEPFQMTALYSTLFALIIAPVAIIIWRMGLFGGADAFALIALAIIAPQITFSENMVTPFTTLSNAAILFIIPLLVNVIRNIISELRGENIFEGFEESTSKKILASVLGYRSKNPKYGFLIEKTEGSVKKIVLSFHHVDNEKFSQKSNTWVTPGIPYLLMIAGGFLIQLVYGDVILVGISNWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U2</accession>
    <name>A0A087S2U2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00356</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20046">
        <property type="protein sequence ID" value="KFM20046"/>
        <property type="gene ID" value="AAA799P11_00356"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.345"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="87" mass="9742" checksum="AC7A717AB9CD431C" modified="2014-10-29" version="1">MSELTLEDIEFIKILATSDAPILQAGMNEATRKRLDEQIGVILREYYHENTTFSGTKRTEEFQKAGITEDHGKAAIACARRLGIDIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y3</accession>
    <name>A0A087S2Y3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphoheptose isomerase protein</fullName>
            <ecNumber evidence="3">5.3.1.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gmhA</name>
        <name evidence="3" type="ORF">AAA799P11_00158</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.28" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20087">
        <property type="protein sequence ID" value="KFM20087"/>
        <property type="gene ID" value="AAA799P11_00158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05006">
        <property type="entry name" value="SIS_GmhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035461">
        <property type="entry name" value="GmhA/DiaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13580">
        <property type="entry name" value="SIS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="31"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="11"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="195" mass="21617" checksum="77F7B3D4822891B5" modified="2014-10-29" version="1">MSIDNLIINNLEEQISTINKLKQNKQVIEEIYQKIKNARNNNNKIFVMGNGGSSSTASHFVSDLLKTSLIKGVNRPKAISLTDNIPVLMAWANDTEFKNIFANQLENFLEKDDIVIGISGSGNSENVVKAIEFANKTEAKTICLLGRDGGELAKISQTNLIIPNEDMLTIETMHLLVCHLITALLRLEGKPVFSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y4</accession>
    <name>A0A087S2Y4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">D,D-heptose 1,7-bisphosphate phosphatase</fullName>
            <ecNumber evidence="6">3.1.3.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gmhB</name>
        <name evidence="7" type="ORF">AAA799P11_00159</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HAD-like hydrolase superfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the gmhB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.-" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20088">
        <property type="protein sequence ID" value="KFM20088"/>
        <property type="gene ID" value="AAA799P11_00159"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.158"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006549">
        <property type="entry name" value="HAD-SF_hydro_IIIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004446">
        <property type="entry name" value="Heptose_bisP_phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006543">
        <property type="entry name" value="Histidinol-phos"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42891">
        <property type="entry name" value="PTHR42891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004682">
        <property type="entry name" value="GmhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01662">
        <property type="entry name" value="HAD-SF-IIIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01656">
        <property type="entry name" value="Histidinol-ppas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR004682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="163" mass="18651" checksum="B60D9EFA539C200C" modified="2014-10-29" version="1">MNKAVFLDRDGVINEERKDYVKTIKEFQVFDDVPKAIKQLKKLGFIVIVITNQSAVNRGIITLETLNEIHMELQKILKENNTSIDKFYFCPHKPDENCQCRKPNPEMLIRAAQDYNIDMKKSVMIGDSLTDIQAAHKAGCKGILLEKNQTLLQIVNSMVDDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y8</accession>
    <name>A0A087S2Y8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acylneuraminate cytidylyltransferase protein</fullName>
            <ecNumber evidence="1">2.7.7.43</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00163</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.43" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20092">
        <property type="protein sequence ID" value="KFM20092"/>
        <property type="gene ID" value="AAA799P11_00163"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008781">
        <property type="term" value="F:N-acylneuraminate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003329">
        <property type="entry name" value="Cytidylyl_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02348">
        <property type="entry name" value="CTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="493" mass="55017" checksum="1F4CF018C17563EA" modified="2014-10-29" version="1">MKILAIIPARGGSKEIPRKNLFPVNGKPLLYYTVSACLNSTLVNRTIVSTDDSEIANVAKNLNAEVVKRPKKLSGDSTSVEPVLKHVLNFLKDKENYVPDVIILPQNTSPLRTSQHIDEALSLLIKKNFDSVLSGYPYHIFVWNKINQSTIKPHSYDPQNRLNRQDTFEQILENGAIYATKTSAFKKSNCRISGKIGFYEMPTELSHNIDTLDDLKKAEKILQEQNQPQNLFSVKGKNIILTGASGLLGSYFARILLERGANMALIDHNPSVSESLKNEFSSTGQNICVYRCDLSKPKEINSTFKKIVKDFSTLDVLINNAAFVSAKSFGIKDFKNFETHPFELWKKSFEVNVDAPFLLCQNVLGIMKKQKSGSIINISSNYGLLGPDFDTYKDEKLWTPPGYAVTKSAILNLTRYIANLYGKDGIRCNTLSPSGVATDKLTNRFKKRYASRNAFKRMAKVSDYAGPMIFLCSDASGYMTGANLIIDGGWTAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z2</accession>
    <name>A0A087S2Z2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-N-acetylglucosamine 46-dehydratase protein</fullName>
            <ecNumber evidence="3">4.2.1.115</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pseB</name>
        <name evidence="3" type="ORF">AAA799P11_00167</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polysaccharide synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.115" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20096">
        <property type="protein sequence ID" value="KFM20096"/>
        <property type="gene ID" value="AAA799P11_00167"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.166"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05237">
        <property type="entry name" value="UDP_invert_4-6DH_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003869">
        <property type="entry name" value="Polysac_CapD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02719">
        <property type="entry name" value="Polysacc_synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Polysacc_synt_2" evidence="2">
        <location>
            <begin position="12"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="336" mass="37841" checksum="DFD9227AD47DAF13" modified="2014-10-29" version="1">MEIGKKINGKTIVITGGTGSLGQALTKRLLKTEVKTIRIFSRNENKQITMAENIEDKDGRLRFFIGDVRDDHRLKHALEGADIVFHAAALKHVPVIEYNPFEGIKTNVIGSQNVIDACLHQDVQIAVGIGTDKAVSPLNTYGATKLLMEKLFVTANNYLNPKKHKTKFLALRYGNVLGSSGSVIPRFINMIKQNKKITITDPNMTRFSLTMDQALDFILDSTFSGKGSEIFVPKLKAYTIKDLKDALFELLKDTGYKKIPVRQGEKFHETLINYDEMRNTWENKSKYIILNPLSANFDKVKSSYTKIDFQTPYSSETVKKMSIKELKASITNSNLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S308</accession>
    <name>A0A087S308_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative endonuclease 4 protein</fullName>
            <ecNumber evidence="2">3.1.21.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nfo</name>
        <name evidence="2" type="ORF">AAA799P11_00183</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20112">
        <property type="protein sequence ID" value="KFM20112"/>
        <property type="gene ID" value="AAA799P11_00183"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008833">
        <property type="term" value="F:deoxyribonuclease IV (phage-T4-induced) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="42"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="279" mass="32211" checksum="8F18F206B6DC54BF" modified="2014-10-29" version="1">MIYVSTSCLRNPINVIRVLQEYEKANIENVELGSVHNFFDVKKLKQFNFNFIVHNYFPPPKTKLIFNLASQNKSILKRSIKLAKDAINLCCDIESPLYTFHAGFTTDPKKLGVRFSQKNILKKETSLKIFVDSVSDVIDYAKNRGIKIAMEPNVVQKFNLTNNKNELLLFADYDEIKQFYKIFKKKDIGILLDLGHTAVTSYWLNFDKNKFVKLCLDKTFAVHVSNNNGRQDQHNSLTKKCWQTSKLKLFKDVPISLETMNLDISQIQKNMKIANSAIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S348</accession>
    <name>A0A087S348_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00228</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20152">
        <property type="protein sequence ID" value="KFM20152"/>
        <property type="gene ID" value="AAA799P11_00228"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.222"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="220" mass="25062" checksum="512874D7E76BC565" modified="2014-10-29" version="1">MSNIDPLLNSRIGIATTYGKPYYRFSTYLKALKLSFDSILPEEIQDYSGHLILTTHKESPKICDTPLLHEDIFEHPPTVIRGIMMQKLNLDFEENDLILGIDPGERTGLSVFYYGKEIESSFHSSVEELVAHIIRVLGGLRAKRKIVKIGNGNMGIAKQIVTMLNLNFCSSFELEFVDERKTSMKIKNFNQRGKRDMLSAKYISQRDGYRHSILPLSMTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S377</accession>
    <name>A0A087S377_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HEPN_Swt1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00257</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20181">
        <property type="protein sequence ID" value="KFM20181"/>
        <property type="gene ID" value="AAA799P11_00257"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041650">
        <property type="entry name" value="HEPN_Swt1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18731">
        <property type="entry name" value="HEPN_Swt1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HEPN_Swt1" evidence="1">
        <location>
            <begin position="79"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="218" mass="25910" checksum="BCB3CFC25E7E6AFE" modified="2014-10-29" version="1">MTVSKSLDPKYLVNIEIGMDVMILEDNQKENKLIPCKVKKKISTDSIVELGVKVECEDGKIGRVKFIGEEAEYREPDELLTLLEKRLRILIEEVLSKTSENWWQDRISKTIQENVELKNEKYEKLRNLLDVDEFSSLEQTDFVHLQWIITGKKNYQFFKDIFGEDKSAIAVKLFELSHFRNIDAHSKELKNLEKQKIRIYFHDIDYQIRRYYKKSSNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F0</accession>
    <name>A0A087S3F0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Plastocyanin protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">petE</name>
        <name evidence="3" type="ORF">AAA799P11_00001</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20254">
        <property type="protein sequence ID" value="KFM20254"/>
        <property type="gene ID" value="AAA799P11_00001"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="296"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="Copper-bind" evidence="2">
        <location>
            <begin position="48"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="336" mass="38522" checksum="DD26A3D61CA8E961" modified="2014-10-29" version="1">MNEKFIAFFIVTISVMFVGTAQNSFAEDFVVSIPYGAFNPELNTPAEVWYDPPELSITVGDTVTWTNDDREGHTVTSGYGAGRFDWMDTKNLGEADGLFDSLRFMPGESWSYTFEKEGSYNYFCVIHPWMEAIIFVDPYIPDFPHDATGKKYESFPTFLITPDRSVEINFSWEPQVIKTHEKVNFIYRFYDAVYDQLLRKLEYDIAILQNNEILYKDEKAVSGAGGDYRQWIFEEPGPIIVKISNIKPYGQVAESQINLSYDATARLGDFTAMVYDNPEKRVTTDKIVQPRETLQFYYEIAVAIIVVPAIMLAVLILYMKTKKNPPSYPERKASPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3G3</accession>
    <name>A0A087S3G3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Virginiamycin B lyase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00014</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20267">
        <property type="protein sequence ID" value="KFM20267"/>
        <property type="gene ID" value="AAA799P11_00014"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.14"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="381" mass="43230" checksum="6284334D90108C56" modified="2014-10-29" version="1">MWGMVITEDNEIWFTDETNDFLWKFSIDEKTYSKMDFPKEIENSFPQKLEYYNGYFLINDFTGNRIVVLNHDDLDNGESEYSVITIPEGYFTSQTSVDQEGNIWFVMWKYQKEAVLHKTNFDTQVTESYSLPSSVYAPNGVSVGPEGNVWIADTAGSSFYQFNPKDLKVTEFVTSDAPLWSFGNSSGLIKTPITRPYWNAFDSDGNMWYNQQTANRLAVFDPVSESMLEYDIPSRNPGWADCGDLADCGTAQSFAFTIQGDNVWFTEWVENNIGVLDASIPVPLSINLEQKEIQIKQGEQKEILLTMNPQTEQTELFLSAATNTDFINTEIKTSSMSISKQSQVPVTIYVDDNAHQGDYKILLSAQILDVVVSSYITVKII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L1</accession>
    <name>A0A087S3L1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator TrmB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00062</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20315">
        <property type="protein sequence ID" value="KFM20315"/>
        <property type="gene ID" value="AAA799P11_00062"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.60"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="244" mass="28514" checksum="D548C43BC99F04C0" modified="2014-10-29" version="1">MEYENDYSYIRDNYSRLILNSARSPKSAIAISKETKISLGTVYRRLEILKKYGFLKISGKIENGNKVMIYHNKPKRYHVQNPRISYILDIIDKNPGLSFRDLQRFSGYPMGTLSNSLSNLEKDSKIIVKRSKRRSNYFPRNISPSEFPTLINLRKETSRRIILFLVENQKGTFSEIRNFANKSPSTVSLTLTNLIENNIIRRVSGLRPYFELQNIQLIHNALMRSEPNTIDKMKDRFADTFSYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L4</accession>
    <name>A0A087S3L4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Copper-containing nitrite reductase</fullName>
            <ecNumber evidence="4">1.7.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_00065</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Fe(III)-[cytochrome c] + H2O + nitric oxide = Fe(II)-[cytochrome c] + 2 H(+) + nitrite</text>
            <dbReference type="Rhea" id="RHEA:15233"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16301"/>
            <dbReference type="ChEBI" id="CHEBI:16480"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="1.7.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Cu(+)</name>
            <dbReference type="ChEBI" id="CHEBI:49552"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Cu(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29036"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotrimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20318">
        <property type="protein sequence ID" value="KFM20318"/>
        <property type="gene ID" value="AAA799P11_00065"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.63"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050421">
        <property type="term" value="F:nitrite reductase (NO-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001287">
        <property type="entry name" value="NO2-reductase_Cu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00695">
        <property type="entry name" value="CUNO2RDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plastocyanin-like" evidence="7">
        <location>
            <begin position="92"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM20318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="474" mass="51388" checksum="BFC290C9EA16A72A" modified="2014-10-29" version="1">MNRRISTLFTIAVIAVMGATLFGSTYTQTQISGQSFDMSKMDIDVMDQIRQMGGLELVMPEAFAEINCGVLAETGRNVVEFNLTGESVELPIMGGKTYNAMTFSGQVPGPTLRVTQGDVVQMTLSIPDDEVTQHGNDMHASQMSASNFGAVGIGESRTYCFIAEAAGVFKYHCSGVDLIGMDQHVLSGMYGIAIVDPIDGYKKLMVEKTKVDGNGNVSLDRKFYDADALEFQLQYNQLYLTPEGNYDAGAMFKHQNTATVVNGMQFGYVPNMAHNLLVNGDVNKNIFVAQPWNGIELKQYQSQLLFVENDQHVRLFIENAGNEPVFFHIVGEILDRVTQGNRVQSAATETWLIGGSQNAIVDVVFDEPGAYAAVNHDYAAIYTGAATVFVAGDPFGLNPVLVEKGIIEAPVPSYAYALGNPSDAIPPMGKNSIAHPAINIHGLYTDELASEMQASGDYVALWEVIPVVAEILTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N9</accession>
    <name>A0A087S3N9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20343">
        <property type="protein sequence ID" value="KFM20343"/>
        <property type="gene ID" value="AAA799P11_00090"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.87"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="7222" checksum="7B8722EF680B96F3" modified="2014-10-29" version="1">MDEQKYSKWTVEGDKKTRWICGCFQTADNYFKFCDAHNETLKKAIQAQIDELDMTLIVEEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S4</accession>
    <name>A0A087S3S4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NUDIX hydrolase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20378">
        <property type="protein sequence ID" value="KFM20378"/>
        <property type="gene ID" value="AAA799P11_00125"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.124"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010945">
        <property type="term" value="F:CoA pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03426">
        <property type="entry name" value="CoAse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045121">
        <property type="entry name" value="CoAse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12992">
        <property type="entry name" value="PTHR12992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="24"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="183" mass="20592" checksum="14C1BAAAB0BA4034" modified="2014-10-29" version="1">MLNLEKIQSTFSTPIDPILENPRKYRLASVLVVIYGKEPKVVMTEKPKDMKFHAGEISFPGGKLESADSDLLDTALRETSEEIGLTITRDQVIGQLDPVITLNSGFLILPFISVVNEIPELTANCEVEKIFRIPLESFLKTMAKDPDPDHNIIQEMFTFEYQNKIVWGASARILKQIQSALKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T8</accession>
    <name>A0A087S3T8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00139</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20392">
        <property type="protein sequence ID" value="KFM20392"/>
        <property type="gene ID" value="AAA799P11_00139"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.139"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CYCLIN" evidence="4">
        <location>
            <begin position="120"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="CYCLIN" evidence="4">
        <location>
            <begin position="213"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="307" mass="34162" checksum="BCB3AFBA3F05E26D" modified="2014-10-29" version="1">MKQILECYFNDNHTSPITDTTTGEICCSDCGIVIKEKTVEQTNGLSTFSNEDFLKNARNGPPSKIAMSNMSKSSIISKKNVDAVGKRIVANNKAHFSRMRLWDSRSKNSNKERNLMRAFTVLDAHASKLSMPENAKEHAAYIYRKAVSKDIIRGSSIPSMMAASVFAACKQLGIPRSMNDTAKVANMSKKKLSRTYKRLVKNLELKVSSFEADYVSKISNSLSVSEKTARLAGKIIHDLKKEHLHVGKNPIGITAASLYLSAINYDEHVPIEKISKKTNISTVTIRKMIKLLRPFAAKYLKSIDLSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNE2</accession>
    <name>A0A087RNE2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01518</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000097">
        <property type="protein sequence ID" value="KFM14996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14996">
        <property type="protein sequence ID" value="KFM14996"/>
        <property type="gene ID" value="AAA799P11_01518"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="23" mass="2621" checksum="EF922AD2CE856D73" modified="2014-10-29" version="1" fragment="single">MKTAIVVDDDHDIVDVFSDILEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RPU9</accession>
    <name>A0A087RPU9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01497</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000085">
        <property type="protein sequence ID" value="KFM15503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15503">
        <property type="protein sequence ID" value="KFM15503"/>
        <property type="gene ID" value="AAA799P11_01497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="78" mass="9064" checksum="709B7A9487811B63" modified="2014-10-29" version="1" fragment="single">MSAGRTIYVLIKLLPSILALRKDRKKWSQQEKNTIDSEQFRKNARKTLDTFVSLGPVYIKLGQWLSSRADILPQPYLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQP3</accession>
    <name>A0A087RQP3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aquaporin Z protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">aqpZ</name>
        <name evidence="6" type="ORF">AAA799P11_01473</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000072">
        <property type="protein sequence ID" value="KFM15797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15797">
        <property type="protein sequence ID" value="KFM15797"/>
        <property type="gene ID" value="AAA799P11_01473"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1378"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015267">
        <property type="term" value="F:channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034294">
        <property type="entry name" value="Aquaporin_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000425">
        <property type="entry name" value="MIP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45724">
        <property type="entry name" value="PTHR45724"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00230">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00783">
        <property type="entry name" value="MINTRINSICP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81338">
        <property type="entry name" value="SSF81338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="18"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="129"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM15797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="160" mass="17084" checksum="A80E98C64152CD27" modified="2014-10-29" version="1" fragment="single">PAVTIGYYITGHISKIQILYYFAAEIIGALLGSLFVMKVIGEKASLGANAPNYDFSLGLIFPVEVLASAMLMGVIFYVVYTKGLRGFSGVAIGGIVGLDILFLAFISGASMNPARALAPALLSGALSDLWLYWTAPFVGTIIVAFLFRGKFQAQRASNYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQU2</accession>
    <name>A0A087RQU2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase, IS4 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tnp9B</name>
        <name evidence="2" type="ORF">AAA799P11_01466</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000068">
        <property type="protein sequence ID" value="KFM15846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15846">
        <property type="protein sequence ID" value="KFM15846"/>
        <property type="gene ID" value="AAA799P11_01466"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="3"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="6975" checksum="DCA410D0D12377CE" modified="2014-10-29" version="1" fragment="single">MEQNGLPISILLSSANQHDSTKFIDVIENISTHLDETAIEQIVQCYADKGYDAKYIREYLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQZ1</accession>
    <name>A0A087RQZ1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrilase-cyanide hydratase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01463</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000066">
        <property type="protein sequence ID" value="KFM15895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15895">
        <property type="protein sequence ID" value="KFM15895"/>
        <property type="gene ID" value="AAA799P11_01463"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="46" mass="5209" checksum="9048A056587CF1B1" modified="2014-10-29" version="1" fragment="single">MKAAVVQFKASTNKETNLKKIISYIEKAASKNATLCAFPEFMMFYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTK8</accession>
    <name>A0A087RTK8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Inorganic pyrophosphatase</fullName>
            <ecNumber evidence="5">3.6.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Pyrophosphate phospho-hydrolase</fullName>
            <shortName evidence="5">PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">ppa</name>
        <name evidence="6" type="ORF">AAA799P11_01404</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>diphosphate + H2O = H(+) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:24576"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="3.6.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.1" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000042">
        <property type="protein sequence ID" value="KFM16812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16812">
        <property type="protein sequence ID" value="KFM16812"/>
        <property type="gene ID" value="AAA799P11_01404"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1332"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004427">
        <property type="term" value="F:inorganic diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006796">
        <property type="term" value="P:phosphate-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00412">
        <property type="entry name" value="pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00209">
        <property type="entry name" value="Inorganic_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008162">
        <property type="entry name" value="Pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036649">
        <property type="entry name" value="Pyrophosphatase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10286">
        <property type="entry name" value="PTHR10286"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00719">
        <property type="entry name" value="Pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50324">
        <property type="entry name" value="SSF50324"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="5">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM16812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="179" mass="20499" checksum="47A6D4E10CCD53E2" modified="2014-10-29" version="1">MSKNFWHDIESGADIPEIINVVVEIPKGSMNKYEYDKKHNMIKLDRVLFSPFHYPGDYGLVPQTLSEDGDPLDALVLVTNPTYPGILIEARPIGLLQMKDAGDLDDKIICVSTNDPRYLHTTDISDIEDHYRSEIAHFFQVYKDLEGKKVEILGWQSAKEAKSIIVESIKRYKNTLKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTL3</accession>
    <name>A0A087RTL3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01409</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000042">
        <property type="protein sequence ID" value="KFM16817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16817">
        <property type="protein sequence ID" value="KFM16817"/>
        <property type="gene ID" value="AAA799P11_01409"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8544" checksum="2ADBF68866B96F47" modified="2014-10-29" version="1" fragment="single">MQKILWVLLSITLVGISTNFAYSQEMGLATFQETAQVIVDRSISQNVTASITLQSTSIQEIRIPAELEQNLREDEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUD8</accession>
    <name>A0A087RUD8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01388</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000038">
        <property type="protein sequence ID" value="KFM17092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17092">
        <property type="protein sequence ID" value="KFM17092"/>
        <property type="gene ID" value="AAA799P11_01388"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1318"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="438" mass="48569" checksum="AEC8A72EA8F9F49A" modified="2014-10-29" version="1">MAVKTTKKKTTTKAKKEAKKVTKREPSPSVLLKKVAAVSDSNKALQKEIKVMSKIFGENQKVLVSMKGMIDSLTSALEHIQKQSKQLNIIEDDTQKLYAGLNQVRTKSNMVDKINNQTAKLQEEINKISEVQKSTKTQEISQQVEDSMNSIRNNSQMIIKIAQRVDEVRDDLRKVSGKTDSFLEVGSEMDKLKNSIEEISGKTAKLETGAQIIDSLKQELTKITESVSDSSNLNSELDAIKVTIDAISSKASKIDSLGGVIEGLKQQFETVASKAGSVDNVSTESIKELAGKIDKIETEIGTLSHRADSTAFVGEGLKSVQEDFSRFKQNVFDKTNSIEQKISSATDMLKRQDASTVEFHKKTEKLFEEMQSVRSVTNKASDDSSKEMMALLKLSEYQSNIRMNAESKYGEAKDLEKMASQTADIVNLFDRISIESAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ4</accession>
    <name>A0A087RVJ4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17498">
        <property type="protein sequence ID" value="KFM17498"/>
        <property type="gene ID" value="AAA799P11_01330"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1270"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="84" mass="9830" checksum="190D04F4A9B266BB" modified="2014-10-29" version="1">MDDGRKIAHVPKESWPSFTWYAIEFAIVLAICMLIAREVVGILTELSPEIQNYVWWGITGLIFLAWYIGIRGFVLKKKILRNRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVK0</accession>
    <name>A0A087RVK0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01336</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17504">
        <property type="protein sequence ID" value="KFM17504"/>
        <property type="gene ID" value="AAA799P11_01336"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1276"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022791">
        <property type="entry name" value="L-PG_synthase/AglD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03706">
        <property type="entry name" value="LPG_synthase_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="112"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="219"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="303"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="331" mass="36299" checksum="0345095D36679681" modified="2014-10-29" version="1">MNWRIAAIPATLIPIFIIAIQFDIKPEDVLAIGFFPFVGAVVAMMIKLGLQGVKFAYIARKYLGNFDSVLKLTGVRVGSEFIKFTTPMFIGAEFIVIYYLHKKGVKPSNSTWIAIMDIVTEVFAAGLLSIMAGIIALLNGAYVVAAVVLGTSITVTTLWMVLFFLSSKRTFQVPKVLGKLAKRFGKEKGAKYIEQTNSWMEEVCTMSRENLKTSESKKVFTISFLFSIASWSFYGISFMIIAMGTGYVINALGANAIGNLPITIGGSGLAEFGIVAYLNNLNPFDFDASQGGLAWDTVIGWRIATYYVPIVITWLLLVKLALSRISKPQAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVP3</accession>
    <name>A0A087RVP3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01307</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000029">
        <property type="protein sequence ID" value="KFM17547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17547">
        <property type="protein sequence ID" value="KFM17547"/>
        <property type="gene ID" value="AAA799P11_01307"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1247"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="14247" checksum="FFFD24E76642A7F7" modified="2014-10-29" version="1">MFRPETILERKSTLFSVVVTGVIAILSVPIIVPHLLHGYHLIHIVLHVGGISLAVFITVLAAFAYQKLRTKRLLLSAIAFTNFIAAEAVLLVDATWPTLYDLDIMSIAEIGHLLTFATLGLLALGVFRND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWT7</accession>
    <name>A0A087RWT7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Lipid-A-disaccharide synthase related glycosyltransferase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01294</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17941">
        <property type="protein sequence ID" value="KFM17941"/>
        <property type="gene ID" value="AAA799P11_01294"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1234"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007152">
        <property type="entry name" value="DUF354"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39662">
        <property type="entry name" value="PTHR39662"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04007">
        <property type="entry name" value="DUF354"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="173" mass="19490" checksum="A46E292E65A1FA83" modified="2014-10-29" version="1">MKIWIDILTPKQLLFSEPIIEKLGKKHEILCTSREYGEVKKLAKIRRINLIFIGKHGGKNKTSKLEASIDRMNKITKKIKQFSPDLTISFASPEAARISFGLGVKHIAFCDSPHADAVMRLTIPLIQKLLIPKIISKKEFTKYGIESKNIISYNSIDAAVTINRKSMGGVQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV6</accession>
    <name>A0A087RWV6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptidase S26B signal peptidase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_01268</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17960">
        <property type="protein sequence ID" value="KFM17960"/>
        <property type="gene ID" value="AAA799P11_01268"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1216"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001733">
        <property type="entry name" value="Peptidase_S26B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027245">
        <property type="entry name" value="Sec11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10806">
        <property type="entry name" value="PTHR10806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10806:SF6">
        <property type="entry name" value="PTHR10806:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02228">
        <property type="entry name" value="sigpep_I_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S26" evidence="6">
        <location>
            <begin position="21"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="173"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="212"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="236" mass="26253" checksum="2A4D2AB35DDB756E" modified="2014-10-29" version="1">MGKKSISKGVIKDIVIVAVGVLVIWIGLQIAFGTQNPFYVVASGSMIPVLEVYDVLIVSGHEPFEDLKVGDIIVFDRPSDHNRVIVHRVASILDEDPRTIRTKGDANPASIPGTDFPITEEEYIGKVAYTLPQVGYVTQLLKPPINYVIIAIVIGIMVVKQFIKRKREKELSFTDPMDSENPNTIEELSGIDKIEGDSEYSEPVGLDTVENNKESSEIKSDEIIEPREESEEEKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY0</accession>
    <name>A0A087RWY0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01249</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17984">
        <property type="protein sequence ID" value="KFM17984"/>
        <property type="gene ID" value="AAA799P11_01249"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="67" mass="7539" checksum="380339C3E8BD440B" modified="2014-10-29" version="1">MHLTRKTKTIILLVIIWTVSTLPLPWIVNNPVVSESAFYTILGIIAIVSIPFVMLGVVWHLKPELTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY6</accession>
    <name>A0A087RWY6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Site-specific recombinase XerC DNA replication protein</fullName>
            <ecNumber evidence="3">3.2.1.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17990">
        <property type="protein sequence ID" value="KFM17990"/>
        <property type="gene ID" value="AAA799P11_01255"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1210"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="146"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="418" mass="48311" checksum="CFC9648CFFF9BEB8" modified="2014-10-29" version="1">MSTKQVQTSKEITIHDFAKSLKHTLDAVEKLSSRNTELIKKYDKEMVRNSLAKGTRLKHLLIILNLSRMLEKDWEGVTKQDIEELVFQFIQKYSPNGKETHHTWDHKKILKIFFRWVKLGSRNFRDVGNPEETKWIRLNRVKSNIVREQLITDEDISKILKSCINPRDKAFFDVHYEAGTRPGEILSLKIKNVKFDKFGAFINVDGKTGSRPIRLVKSVPNLANWLNVHPQKEDPESPVWIILEKPKFGEPMKYHTATSLLKRTMKRAGINKHFNLKLFRHSEATNSAKFMTEAQMKIRHGWTNDSKMPANYVHLVNSDVDETYLKHLGIKPQEEEIQDLPRKCTICSMMNSSDSSICTKCGKPLDLKKAMEMEEKLSQENFMVNKIAGKVLVQMLVTGQIPKLSKSEINSLIQSLNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RX09</accession>
    <name>A0A087RX09_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Acetolactate synthase</fullName>
            <ecNumber evidence="4 8">2.2.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">AAA799P11_01245</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="8">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="4 8"/>
    <dbReference type="EMBL" id="JOSZ01000024">
        <property type="protein sequence ID" value="KFM18013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18013">
        <property type="protein sequence ID" value="KFM18013"/>
        <property type="gene ID" value="AAA799P11_01245"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1201"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044272">
        <property type="term" value="P:sulfur compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd02015">
        <property type="entry name" value="TPP_AHAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012846">
        <property type="entry name" value="Acetolactate_synth_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039368">
        <property type="entry name" value="AHAS_TPP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00118">
        <property type="entry name" value="acolac_lg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6 8 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="11">
        <location>
            <begin position="6"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="9">
        <location>
            <begin position="193"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="10">
        <location>
            <begin position="390"/>
            <end position="537"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM18013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="562" mass="60994" checksum="7A0965D5B1D818AD" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXM0</accession>
    <name>A0A087RXM0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">50S ribosomal protein L3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rpl3</name>
        <name evidence="7" type="ORF">AAA799P11_01141</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18224">
        <property type="protein sequence ID" value="KFM18224"/>
        <property type="gene ID" value="AAA799P11_01141"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1102"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.960.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045077">
        <property type="entry name" value="L3_arc_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000597">
        <property type="entry name" value="Ribosomal_L3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019928">
        <property type="entry name" value="Ribosomal_L3_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019926">
        <property type="entry name" value="Ribosomal_L3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044892">
        <property type="entry name" value="Ribosomal_L3_dom_3_arc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11363">
        <property type="entry name" value="PTHR11363"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00297">
        <property type="entry name" value="Ribosomal_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03626">
        <property type="entry name" value="L3_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00474">
        <property type="entry name" value="RIBOSOMAL_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="113"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="331" mass="36789" checksum="1B78193FDBB9D983" modified="2014-10-29" version="1">MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEPKILAHCGFKAGCVQIVSIDDREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKNIAKEISLKNKQENAIENAEKSLKKIKEIFAIVAVSPSAAGLEQKKPYIFEASVSGGDIPKQFTHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKKKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMGNTEDDKLKINPDGGYKHFGLVKGDFIILKGSVPGTYRRLIKLRSQIRNVPAKVNKPNILEVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN0</accession>
    <name>A0A087RXN0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">50S ribosomal protein L24</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rpl24</name>
        <name evidence="4" type="ORF">AAA799P11_01151</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Located at the polypeptide exit tunnel on the outside of the subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="2">One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the universal ribosomal protein uL24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18234">
        <property type="protein sequence ID" value="KFM18234"/>
        <property type="gene ID" value="AAA799P11_01151"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1112"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06089">
        <property type="entry name" value="KOW_RPL26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01326_A">
        <property type="entry name" value="Ribosomal_L24_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041988">
        <property type="entry name" value="KOW_RPL26/RPL24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005825">
        <property type="entry name" value="Ribosomal_L24/26_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005756">
        <property type="entry name" value="Ribosomal_L26/L24P_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11143">
        <property type="entry name" value="PTHR11143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16906">
        <property type="entry name" value="Ribosomal_L26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01080">
        <property type="entry name" value="rplX_A_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01108">
        <property type="entry name" value="RIBOSOMAL_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="102"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="106"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="165" mass="18586" checksum="C4F00BA42A2B9113" modified="2014-10-29" version="1">MKPTKMRNKMIYRASYQTKSKQLGSALSKDLHKKYGKRSVRVIEGDSVTILRGEFKGVDGKVAEVSTDKSSVAIEGVKKEKTKGDKFDVFIHTSNLLVTSLNTDDKWRMAKLEGKDPRKQPKEAPKPAAKAEEKPAKEAPKKETPKEDPKETKVEKKAEKKEDEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY02</accession>
    <name>A0A087RY02_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01131</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18356">
        <property type="protein sequence ID" value="KFM18356"/>
        <property type="gene ID" value="AAA799P11_01131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="32" mass="3786" checksum="FEBD53274FACF521" modified="2014-10-29" version="1">MVKQNKLKNNGIDFVKQNFKNTAKRTMVYNNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY31</accession>
    <name>A0A087RY31_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase protein</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01098</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18385">
        <property type="protein sequence ID" value="KFM18385"/>
        <property type="gene ID" value="AAA799P11_01098"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1059"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011576">
        <property type="entry name" value="Pyridox_Oxase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01243">
        <property type="entry name" value="Putative_PNPOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative_PNPOx" evidence="1">
        <location>
            <begin position="4"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="148" mass="16579" checksum="A1923DFBFA8CE054" modified="2014-10-29" version="1">MSEITDEIKDFLNLQKLGYVATVSSDGTPNISPKGTIIGWSQNQLAFADIRSPDTIQNLKSNPNVEINVIDPLLRKGFLFKGLAKIIQDGTLYDDILKHYRDNDIKSPIGVIVLVDVTKISEVTSPLYDMGITEDEIKSKWKKHFDSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY34</accession>
    <name>A0A087RY34_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01101</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18388">
        <property type="protein sequence ID" value="KFM18388"/>
        <property type="gene ID" value="AAA799P11_01101"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1062"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11648" checksum="80B8A17EDB5FBB74" modified="2014-10-29" version="1">MLQDSTIRKSLDQYIKNRILEINIEIKQTFPNIKKIWKCENETDFLYGYYVGKIEEGALHYLLKATRASAGGYVDSFEIRGIIEEHKNELYDAIKSATNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY42</accession>
    <name>A0A087RY42_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inosine-5'-monophosphate dehydrogenase protein</fullName>
            <ecNumber evidence="3">1.1.1.205</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01109</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18396">
        <property type="protein sequence ID" value="KFM18396"/>
        <property type="gene ID" value="AAA799P11_01109"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1070"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="20"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="84"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="14522" checksum="AAD1F271C01C850F" modified="2014-10-29" version="1">MTMVSRKDFDYSSIKVQDIMTRALITVNPSTTALQVAKMMEQGRIGAVIVKDGENLVGIVTDRDYATKVAANNLPFDTTVEKIMSSPLITINQGESISAAAETMASKKIRKLAVSDNGNITGIITSTDLVNQLAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE2</accession>
    <name>A0A087RYE2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GMP synthase glutamine-hydrolyzing protein</fullName>
            <ecNumber evidence="2">6.3.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01066</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18496">
        <property type="protein sequence ID" value="KFM18496"/>
        <property type="gene ID" value="AAA799P11_01066"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1028"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001674">
        <property type="entry name" value="GMP_synth_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00958">
        <property type="entry name" value="GMP_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMP_synt_C" evidence="1">
        <location>
            <begin position="4"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="74" mass="8273" checksum="5479591EDA2D06A2" modified="2014-10-29" version="1" fragment="single">GDDRAVGVVGDERKYGNIVMIRVVDSIDAMTADWTRLPHGLLEKMSNRITNEIEDVTWVTYTISSKPPATIEPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL3</accession>
    <name>A0A087RYL3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Putative 3-methyladenine DNA glycosylase</fullName>
            <ecNumber evidence="5">3.2.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01054</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the DNA glycosylase MPG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.-" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18567">
        <property type="protein sequence ID" value="KFM18567"/>
        <property type="gene ID" value="AAA799P11_01054"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1016"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003905">
        <property type="term" value="F:alkylbase DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00540">
        <property type="entry name" value="AAG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00527">
        <property type="entry name" value="3MGH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011034">
        <property type="entry name" value="Formyl_transferase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003180">
        <property type="entry name" value="MPG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036995">
        <property type="entry name" value="MPG_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10429">
        <property type="entry name" value="PTHR10429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02245">
        <property type="entry name" value="Pur_DNA_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50486">
        <property type="entry name" value="SSF50486"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00567">
        <property type="entry name" value="3mg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4 5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="185" mass="21041" checksum="A5385A1C3F801C62" modified="2014-10-29" version="1">MNILPRKFYLQDTVTVAKNLLGKKIIRKIGKSEISGIITETEAYRHKDDPASHAYRKITDRNKAMFGDVGMAYVYFTYGMYYCFNVVARNPRVAAGAVLIRAIQPEKGIKRMQENRNKEDLKNLTNGPAKLTQALEITKEHYGIDLTKNSKLYIAEGIKAKNIVSSPRIGIKEATDKLWNFKINI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ18</accession>
    <name>A0A087RZ18_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thioredoxin-1 protein</fullName>
            <ecNumber evidence="3">1.8.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">trxA</name>
        <name evidence="3" type="ORF">AAA799P11_01012</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.9" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18722">
        <property type="protein sequence ID" value="KFM18722"/>
        <property type="gene ID" value="AAA799P11_01012"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.978"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000077">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="18"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="1">
        <location>
            <begin position="58"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000077-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="15189" checksum="F2380C81CB1D2F4E" modified="2014-10-29" version="1">MSEDPEIEKIKQRKLEEMLKQQNQPKVEPGIIDLDDSNFEQTILAENPTLVDFWAEWCGPCKMMHPVFESLSKKYPKVKFARVNVDNNQNIAMKFAVQSIPTFIMFKSGQIVDKMMGAVGAPGINMICQKHSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ19</accession>
    <name>A0A087RZ19_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01013</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18723">
        <property type="protein sequence ID" value="KFM18723"/>
        <property type="gene ID" value="AAA799P11_01013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="48" mass="5416" checksum="A757C7531DDF0E97" modified="2014-10-29" version="1">MGKLSRNLRICGDCGIAYTSVSFTKYIDQCPICNSRRFEAIPVKSEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ40</accession>
    <name>A0A087RZ40_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01039</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18744">
        <property type="protein sequence ID" value="KFM18744"/>
        <property type="gene ID" value="AAA799P11_01039"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1000"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="200" mass="22971" checksum="B1E7334FD3D25365" modified="2014-10-29" version="1">MITALYLAHLNPVTKAHVEIIEELKKEADVVKVMPVVFKEGEKEINSKSFPFNFKTRKKMLESVFGDSIQITDDYAFFAPFKKYMPPLLSPKSWKLRKQILRGVEGEFFSYTGDKAEGYMLKIYRLKPKIGERKSLSAASVKEKLYDAALGKESSWKEDVPENIAKVIEEDWETVKKFAGLEDMTTRVAGMKFPKEGWSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ53</accession>
    <name>A0A087RZ53_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rpl2</name>
        <name evidence="7" type="ORF">AAA799P11_00966</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18757">
        <property type="protein sequence ID" value="KFM18757"/>
        <property type="gene ID" value="AAA799P11_00966"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.930"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01320_A">
        <property type="entry name" value="Ribosomal_L2_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022666">
        <property type="entry name" value="Rbsml_prot_L2_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002171">
        <property type="entry name" value="Ribosomal_L2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023672">
        <property type="entry name" value="Ribosomal_L2_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022669">
        <property type="entry name" value="Ribosomal_L2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014726">
        <property type="entry name" value="Ribosomal_L2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691">
        <property type="entry name" value="PTHR13691"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00181">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03947">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002158">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01383">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01382">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L2_C" evidence="6">
        <location>
            <begin position="90"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="203"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="244" mass="25984" checksum="4218A78224BE8842" modified="2014-10-29" version="1">MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQHEGEIIDLVHERGREAPLAKVRFEDGSVSFVPAILGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEGVTVKLPSGKFTTLNPKNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDAPPGAKVGSIAARKTGRARIKERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ70</accession>
    <name>A0A087RZ70_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00983</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18774">
        <property type="protein sequence ID" value="KFM18774"/>
        <property type="gene ID" value="AAA799P11_00983"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.949"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="137" mass="15313" checksum="FD0A734DB3A0A640" modified="2014-10-29" version="1">MVAIDTPASVESFRRFIISSTCKSYAPRSYLDDSEVFAEREDSLGAIYVEAADKVTLKKIRDITFVNARDILGIIYNSKSGNTSLKWRQLKRNHGKVTGEASANSLTNLAESGVLTLDWVESYLKKKSEEKTNEVTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB1</accession>
    <name>A0A087RZB1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00936</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18815">
        <property type="protein sequence ID" value="KFM18815"/>
        <property type="gene ID" value="AAA799P11_00936"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="12806" checksum="9E1F3E9C51DFD1E4" modified="2014-10-29" version="1">MKYLDNQTIIKLSEIMGKTIGKSMSLAMRGVYDLDSWLDILNCRAKAAGFKFQKINSDDKIKIIVNHNMGQKWSLWYKHFYTSVIHDLGYKVDFETTNDVVVYTVFNNKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG9</accession>
    <name>A0A087RZG9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Periplasmic binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00904</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18873">
        <property type="protein sequence ID" value="KFM18873"/>
        <property type="gene ID" value="AAA799P11_00904"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.866"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="1">
        <location>
            <begin position="5"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="228" mass="25832" checksum="432E7402F0EF4CF0" modified="2014-10-29" version="1">MTVNRIVSFLPSATELLYEFGVEDKIYGVTHECRFPEEAISKPQVISAVIDSDKLSSNEINTQTCQLLNEGKDIFMLNEKNLKDANPDLIISQETCEVCAAYTNQVNKALQIIDRKPIIHSIDPHNISEILDTVIKLGKILEEEDKAKEISESLEKRIQKIKNTEHTNIPKILAIEWIEPFFTAGHWVPEMIEIAGGRNTISKTGEHSRRMDFEEISNSDADIIILMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL6</accession>
    <name>A0A087RZL6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">rps4</name>
        <name evidence="8" type="ORF">AAA799P11_00861</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="4">With S5 and S12 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18920">
        <property type="protein sequence ID" value="KFM18920"/>
        <property type="gene ID" value="AAA799P11_00861"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.827"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01306_A">
        <property type="entry name" value="Ribosomal_S4_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022801">
        <property type="entry name" value="Ribosomal_S4/S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005710">
        <property type="entry name" value="Ribosomal_S4/S9_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001912">
        <property type="entry name" value="Ribosomal_S4/S9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022802">
        <property type="entry name" value="Ribosomal_S4_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831">
        <property type="entry name" value="PTHR11831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01390">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01018">
        <property type="entry name" value="uS4_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_S4" evidence="7">
        <location>
            <begin position="5"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="S4" evidence="6">
        <location>
            <begin position="103"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="155"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="163"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM18920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="199" mass="22834" checksum="C9EA823C80A199BF" modified="2014-10-29" version="1">MGDPKYPRRVWRKPKRPLNYELKMEELKTLGTFGLRTKRELWKAHTELSRVRHQARSLLALRQEVRAEKEPILMKSLARIGLVSADATLDDVLSLTPNDLLSRRLQTIVTKKLGFKTPYQARQAVVHGHIMIGERKVDIPSYTVTVEEEDSIHFTPESKIPQVLEKTKNETPEEKVEAPAEEKVEAPAEEKKDESSSTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN3</accession>
    <name>A0A087RZN3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">tRNA-methyltransferase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cmoA</name>
        <name evidence="6" type="ORF">AAA799P11_00883</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18937">
        <property type="protein sequence ID" value="KFM18937"/>
        <property type="gene ID" value="AAA799P11_00883"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.845"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016279">
        <property type="term" value="F:protein-lysine N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026170">
        <property type="entry name" value="FAM173A/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025714">
        <property type="entry name" value="Methyltranfer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13610">
        <property type="entry name" value="PTHR13610"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13847">
        <property type="entry name" value="Methyltransf_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltranfer_dom" evidence="5">
        <location>
            <begin position="43"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="65"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="29162" checksum="88B4D503CB7BCEBB" modified="2014-10-29" version="1">MKIDEYLETLPENLLSGEDVQLPEKSLREIFKFVELGKEDIFYHLGCGNEKGIEIAKKEFQVEKAVGIDNNCEKIENAKKNLKEKQIQAEVKCQDILDSDISDATVILFWFTDENITNQMLKKFESLESDTKIITIWGPLPDCIPDKVNFPYIINKVPFKKAKNMQEQLLAIFGVKCVDFVTAWEFAERYTKAIGSSEIKNDRFLTIIQTLVIWINAKKLGVACGDEIPESIQTYIKLMKMNFDIDFEPMLKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN4</accession>
    <name>A0A087RZN4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0147 protein AAA799P11_00884</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00884</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0147 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18938">
        <property type="protein sequence ID" value="KFM18938"/>
        <property type="gene ID" value="AAA799P11_00884"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.846"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00342">
        <property type="entry name" value="UPF0147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023130">
        <property type="entry name" value="Ta0600-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005354">
        <property type="entry name" value="UPF0147"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03685">
        <property type="entry name" value="UPF0147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="89" mass="9945" checksum="BE38CA16A2E1BD86" modified="2014-10-29" version="1">MADEAQNKESMKEAIDTLNQIIASSSTPKTIKKSITDLITDLNNDEYSLSVRAANTISLLDDVTQDPNMPSYVRTQLWQAVSKLESIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZN9</accession>
    <name>A0A087RZN9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Short chain isoprenyl diphosphate synthase protein</fullName>
            <ecNumber evidence="3">2.5.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">idsA</name>
        <name evidence="3" type="ORF">AAA799P11_00889</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.1" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18943">
        <property type="protein sequence ID" value="KFM18943"/>
        <property type="gene ID" value="AAA799P11_00889"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.851"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004161">
        <property type="term" value="F:dimethylallyltranstransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="320" mass="35033" checksum="6FEFC10839783DFE" modified="2014-10-29" version="1">MKKNAKTVNKYLKSKLKGNPKKLYDAAGHLIIHGGKRLRPYMVIRSCQILGGKVSNAMPAASAVEMVHNFTLVHDDIMDNDEMRHGVPTTHRKYGMPVAILAGDVLFSKAYQVISDTKLSPTATTHLISRLAKACVDVCEGQLLDVKMAEEKKIPTQSQYITMIGKKTAALFDVSCAMGAICATNNDKDISNLSSFGRNLGIAFQITDDLIGVMGDPKITKKPVGNDLREGKKSLPILMAIKIAKGKDKKIILKAFGNSKISRNDLNKAVEVIRSLGIEESVRKQALKYAEKAEKSLSKYSGSVKTELITLLDFVVKRSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZP3</accession>
    <name>A0A087RZP3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 10">Mevalonate kinase</fullName>
            <shortName evidence="10">MK</shortName>
            <shortName evidence="10">MVK</shortName>
            <ecNumber evidence="2 10">2.7.1.36</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">mvk</name>
        <name evidence="13" type="ORF">AAA799P11_00893</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17065"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:36464"/>
            <dbReference type="ChEBI" id="CHEBI:58146"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.36"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="9 10">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via mevalonate pathway; isopentenyl diphosphate from (R)-mevalonate: step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the GHMP kinase family. Mevalonate kinase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.36" evidence="2 10"/>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18947">
        <property type="protein sequence ID" value="KFM18947"/>
        <property type="gene ID" value="AAA799P11_00893"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.855"/>
    <dbReference type="UniPathway" id="UPA00057">
        <property type="reaction ID" value="UER00098"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004496">
        <property type="term" value="F:mevalonate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019287">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, mevalonate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00217">
        <property type="entry name" value="Mevalonate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006203">
        <property type="entry name" value="GHMP_knse_ATP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006205">
        <property type="entry name" value="Mev_gal_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022937">
        <property type="entry name" value="Mevalonate_kinase_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43290">
        <property type="entry name" value="PTHR43290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00549">
        <property type="entry name" value="mevalon_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00627">
        <property type="entry name" value="GHMP_KINASES_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="6 10 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GHMP_kinases_N" evidence="11">
        <location>
            <begin position="89"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP_kinases_C" evidence="12">
        <location>
            <begin position="220"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM18947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="313" mass="34430" checksum="B1D5EAEE47425686" modified="2014-10-29" version="1">MKSKASAPGKVILFGEHFVVYGVKAILCAINKRIIVTAEEISERKISIKSNIGKLELEPNKPISEINSPLKPFYYLADKIIQDRDSGIKIEVESEIPLGVGLGSSSACCIAGAAAISKLFKNISKDEILKLAIEAEKTIFQNTSGADCTVCTFGGLMEYDKKNGFSKIESEPNFHLVIANSNVEHSTESVVAGVREFKENNEKEFSKLCEDESYLIENVLELLKEDNVKDLGQKAIQNQEYLEKIGISNDKLRDMIKIGQKASFGAKITGAGGGGCIFALTDESNLENTIKEFKENNYECFSVKIDFKGLDTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR6</accession>
    <name>A0A087RZR6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thrombospondin type 3 repeat domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00822</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18970">
        <property type="protein sequence ID" value="KFM18970"/>
        <property type="gene ID" value="AAA799P11_00822"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.785"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003367">
        <property type="entry name" value="Thrombospondin_3-like_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028974">
        <property type="entry name" value="TSP_type-3_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02412">
        <property type="entry name" value="TSP_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103647">
        <property type="entry name" value="SSF103647"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="492" mass="55183" checksum="BF3594732E28FCE6" modified="2014-10-29" version="1">MISRFFIIPVIIAIGLSVTVLFMNFEEIAETKLAGVDADKDKISDRIDNCPKIKNEDQDDFDQDAVGDPCDLDDDNDGIVDVLDVFDDNPEEWSDFDFDGIGSKEDPDDDNDGVIDSMDEAPVPVSEELVATYLENIQECAIRDDGTSRLLCYSQFFGRVAEDQENNSNALELSIALSKIGLIDDCHFVSHEVGHVAFNENPSVIENLVGMDGTMCRGGYFHGVLAAYFHDVQEDGDPFPSDYDTVCNDLIGTSNYQDCVHGLGHGMVHYFEEDLESSLQMCHNMSFYQNRLCVKGVMMQYTDNVLTRQGISKDIMSELCKESKLDDIDFVECSMSAGTTLAFFTNHDYEEGSKSCNLIENKQGRDHCLEGLKLEIQDSEKYEVEPLTLDKREKFQPQFVEEDSKVIDIQSPAVISNFQFVPEAGLISFVIDRPQYVVMYIPNEFLSSKMIVTVNGQIPDELYTKGNMLGERVSMIRFVPDDSGLVMITPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS3</accession>
    <name>A0A087RZS3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00829</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18977">
        <property type="protein sequence ID" value="KFM18977"/>
        <property type="gene ID" value="AAA799P11_00829"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="129" mass="15200" checksum="1CB9EEBF2FD2A9EE" modified="2014-10-29" version="1">MLIRKLRIKREWKDHDAEQYKVYDPTKGVRELVQPIWIKENDSNKWIVDFRSPAKISDFAYDEKTKMMQFSFDSPYRIIIYISTDLLTENPVVTVNGQIQNNLEITHGLYDNHSMIKILPDKSGVVVIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZU9</accession>
    <name>A0A087RZU9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM19003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19003">
        <property type="protein sequence ID" value="KFM19003"/>
        <property type="gene ID" value="AAA799P11_00855"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.823"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="83" mass="9882" checksum="D7F3BC7520781EA7" modified="2014-10-29" version="1">MDDYPVSVDENGVKIKPEKMEQEKLYHCIFKEKAMLVFKDSQDVMNCYEIEEKDLVEKIKQIDSDDDLEKLFDDYLKGQDLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M1</accession>
    <name>A0A087S0M1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S6e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rps6e</name>
        <name evidence="6" type="ORF">AAA799P11_00793</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19275">
        <property type="protein sequence ID" value="KFM19275"/>
        <property type="gene ID" value="AAA799P11_00793"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.764"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00512">
        <property type="entry name" value="Ribosomal_S6e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001377">
        <property type="entry name" value="Ribosomal_S6e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020924">
        <property type="entry name" value="Ribosomal_S6e_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018282">
        <property type="entry name" value="Ribosomal_S6e_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11502">
        <property type="entry name" value="PTHR11502"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01092">
        <property type="entry name" value="Ribosomal_S6e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01405">
        <property type="entry name" value="Ribosomal_S6e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00578">
        <property type="entry name" value="RIBOSOMAL_S6E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="114"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="137" mass="14854" checksum="84314B9A11EE7CE3" modified="2014-10-29" version="1">MANFKITISDTKGKSMSKELKDSDANPLLGLELGQETDASVVGLSGKLRLTGGSDKSGVPMRNDIHGATRKYVLLSKGVGLQDAEKGQRVRKLMRGNTVSEEIYQINCKFDGELPVEEAPAEDATESAEEKPEDKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M3</accession>
    <name>A0A087S0M3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TPR repeat domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00800</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19277">
        <property type="protein sequence ID" value="KFM19277"/>
        <property type="gene ID" value="AAA799P11_00800"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.767"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001440">
        <property type="entry name" value="TPR_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="239"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="320" mass="36395" checksum="FA918CE9A927A6DB" modified="2014-10-29" version="1">MEQEDHELLLPLVEEENICLPLPVNVVSKYWNIDLPMAEAIETAKKYAGFNGSILIEGIESAERHGLICKIVHSSLNELKKIIDSGIPPIVILPGIPEVTQHASIITGYNDEEKTILHYIQTGNQEGEMQEGAIPEDIFEKEWSEEGKLLIIIAPSDILSSIKLENDSFEKSNRLCFESERQSILKNNSEAIKSLNQAIELNPKNPTALHLLGTMMNEQKSPECIKFYEKCLELNNSSYLTYNGLGNFYLKTNDFKKAEDCYTKAIEINPKRSAKIYKNRAYLREQQNKNSDAKDDLKSYLKYFPKAPDRGIIEQAIREL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S111</accession>
    <name>A0A087S111_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Chaperone protein DnaJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00739</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19415">
        <property type="protein sequence ID" value="KFM19415"/>
        <property type="gene ID" value="AAA799P11_00739"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.712"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="3">
        <location>
            <begin position="117"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="138"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="182" mass="21537" checksum="B503D15F6E8BB710" modified="2014-10-29" version="1">MRIASIFLISIVLLLVQTSYGQEKELDMDLEVTDEEKIILFGGFAIAVIGLFLFLARDIILRRKTSYDKEELESKKDKTHEKYQSDWGDDYEEIGKRRNTIKDKEFRDAARNDELPNYYEVLGVSREATQEEIKKKFRELAKKTHPDRTKEDSEEEMSKLNKAYEVLSDEDNRARYDKYFVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S122</accession>
    <name>A0A087S122_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Guanosine-3'5'-bis 3'-pyrophosphohydrolase protein</fullName>
            <ecNumber evidence="1">3.1.7.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">spoT</name>
        <name evidence="1" type="ORF">AAA799P11_00750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.7.2" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19426">
        <property type="protein sequence ID" value="KFM19426"/>
        <property type="gene ID" value="AAA799P11_00750"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008893">
        <property type="term" value="F:guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="175" mass="20055" checksum="62195073ABFE14A1" modified="2014-10-29" version="1">MLQKAENFAKLKHQGQLRADKKTPYHSHLKQVVEQLKKMGVVNENILCTGWLHDTIEDTDTDYDTIMKNFNENIANYVASVTKDTRLVKVQQERQYVAQLTNAPWQSKVVKLADIIANFKDLPNGYSDKSIQDTKVKAKIPYIMAIKSELITRPETPHIESALASMPSRWCKLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S126</accession>
    <name>A0A087S126_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00754</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19430">
        <property type="protein sequence ID" value="KFM19430"/>
        <property type="gene ID" value="AAA799P11_00754"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011604">
        <property type="entry name" value="PDDEXK-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="137" mass="16183" checksum="A21CA0679C936801" modified="2014-10-29" version="1">MTEIESYVVQAFRNAQNDLLSQSTGSRIHTWHVSDFVSPCLRKTWYSKTQPRRPMSDKTRSVLYNGLIVHEYSKLSHFHEVTFCYDIIQEKSYTPQQVQSLKYEETRNIITGTLDDLVNFNFNLLFSILFDNDYKLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S134</accession>
    <name>A0A087S134_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">1,4-dihydroxy-6-naphtoate synthase</fullName>
            <ecNumber evidence="2">4.1.-.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Menaquinone biosynthetic enzyme MqnD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mqnD</name>
        <name evidence="3" type="ORF">AAA799P11_00762</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Quinol/quinone metabolism; menaquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MqnA/MqnD family. MqnD subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.-.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19438">
        <property type="protein sequence ID" value="KFM19438"/>
        <property type="gene ID" value="AAA799P11_00762"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.735"/>
    <dbReference type="UniPathway" id="UPA00079"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016830">
        <property type="term" value="F:carbon-carbon lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00996">
        <property type="entry name" value="MqnD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003773">
        <property type="entry name" value="Menaquinone_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030869">
        <property type="entry name" value="MqnD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37167">
        <property type="entry name" value="PTHR37167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02621">
        <property type="entry name" value="VitK2_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0474">Menaquinone biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="108"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="275" mass="30849" checksum="C2BAAEC8BDDDD452" modified="2014-10-29" version="1">MEISVGHTPDSDDAFMFYGMFTGKVLSPDFKVNHVIEDIEKLNRKATDPQLDVTAVSVYACAYIPGYTILRSGGSFGIGYGPIVTAREQMSIDEIKKCKIAIPGKMTSAFLLLQLMIGKFDYVEMNFSDIPEAVKSGKVDAGLVIHETQLSYEQEGNVKILDVGEWWDKTTNGLPVPLGINVMRTDLGMDTIHKFDKYLQASIEYGLEHLEDALEYAMQYSRGKPRDLIEKFVKMYVNQVTVNMGDSGEESIRKLFEMAKEKDLVPDFELSIAIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A0</accession>
    <name>A0A087S1A0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19504">
        <property type="protein sequence ID" value="KFM19504"/>
        <property type="gene ID" value="AAA799P11_00705"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.675"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="234" mass="27300" checksum="D1FEB228B3B8B987" modified="2014-10-29" version="1">MSKTYDVKTVVLRKNIELEDATEIIESKKTKPFKSLLSRPKKEQVHIHSIKLYYECILMVSGKYIADYYRKATHTISVPSNVKEVELGDGVFQIRSKSGFEKAFVGKRGKNKIDMKLEEHVFVEEEDDLAFDHHGREIKFPFKVNSKTVENYPKRLLQKNEPNVKRPEMTYDAALEKLQSQLKKPLETDVRELSEEFMLREITELYVPVFEARLIGPKKKVGIIRIDAVRKKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A3</accession>
    <name>A0A087S1A3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mannose-1-phosphate guanylyltransferase 2 protein</fullName>
            <ecNumber evidence="2">3.5.4.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">manC2</name>
        <name evidence="2" type="ORF">AAA799P11_00708</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19507">
        <property type="protein sequence ID" value="KFM19507"/>
        <property type="gene ID" value="AAA799P11_00708"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.678"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102480">
        <property type="term" value="F:5-fluorocytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004131">
        <property type="term" value="F:cytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="40"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="120" mass="13780" checksum="4EF34BD3CF7BF04F" modified="2014-10-29" version="1">MTIIRNSEIEPIQGNEGTSIKQFFHPHNTLERIGYSLAQFTLEPEKKSKLHKMKSSEIYYILEGKANLRINDNTMELEKDDSAYVPPNAKQSIENIGDGNLRFLCIVEPAWKAEDEIILE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E3</accession>
    <name>A0A087S1E3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator protein-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00536</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19547">
        <property type="protein sequence ID" value="KFM19547"/>
        <property type="gene ID" value="AAA799P11_00536"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.517"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="266" mass="30550" checksum="54785FDECFCF43B6" modified="2014-10-29" version="1">MADLIDEAADYVLELASSQRLSILIGLLTKQSTPTAFAKSIDSTKQEVHRNFSRLEKAGLIKKNVGGTYSLTTFGQVVCTQVPSLVFLSQNRKYFEEHNFGDIPHKFQMRCGQLANAQYVKGVSKVLETWKSIYKNSNEYIYEILSEVPLDLIEPLVKQVKKGVKFNYIFSESVVVPKGRKALLKKLGFDKLMEKGLIERKMEKDVKTVVVLNEKEACLMFPTLDGESDISEMLYSDDPMFHEWCLDYFRYCWYGSDIFKESKLKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1E7</accession>
    <name>A0A087S1E7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19551">
        <property type="protein sequence ID" value="KFM19551"/>
        <property type="gene ID" value="AAA799P11_00540"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="83" mass="9601" checksum="E05E66E9A49461C9" modified="2014-10-29" version="1">MKNYSQTYGNSKLQKLFDTCKLEGRWKRMDDSLPRCYVSLEDGAAISLSMLGVDYSESFIFKKNSKIVVKDSVAEFFEDDLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K7</accession>
    <name>A0A087S1K7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19611">
        <property type="protein sequence ID" value="KFM19611"/>
        <property type="gene ID" value="AAA799P11_00600"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="57" mass="6318" checksum="EDAD7E0A30C4E57A" modified="2014-10-29" version="1">MSLESSVASARKESKSLRATIPEGIVAYLDLKATDKLEWKMDTIKGKRVAIIRGVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M0</accession>
    <name>A0A087S1M0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">tRNA-dimethyltransferase protein</fullName>
            <ecNumber evidence="7">2.1.1.144</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">trm1</name>
        <name evidence="7" type="ORF">AAA799P11_00613</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.144" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19624">
        <property type="protein sequence ID" value="KFM19624"/>
        <property type="gene ID" value="AAA799P11_00613"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.600"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004809">
        <property type="term" value="F:tRNA (guanine-N2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002905">
        <property type="entry name" value="Trm1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10631">
        <property type="entry name" value="PTHR10631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02005">
        <property type="entry name" value="TRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51626">
        <property type="entry name" value="SAM_MT_TRM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="1 6" id="KW-0820">tRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="350" mass="39519" checksum="4900DCB7BC2C8632" modified="2014-10-29" version="1">MLEIPNESLQEIVEGKTKLLVPKGSITEKVPPKEPAFFNPKAKLNRDFSIIAYAAFLKNFQGPKIFLEGLSGIGARGLRVANELEIDNLVINDLNPTALKMAEYSAKLNGIKNVEFVEKEVCRFFSNFSKKGERGSIVDIDPFGSPAAFFDCAIRATMHGGILSVAATDLQVLNGLFQSACKRKYGGVPIRVEYGNEIAIRLVLGCLRMVAARLGVEVKPIFVESDMHYYRTYVKVLNRPDQEENIGYILHCKNCRHREVSLEQKQECDLCKSRIDTAGPLWIGKIFDKEFIENMLIQIPNLQVDKVCEKTLNKCLLEAEMPGTYYTLDEIAKKIISTKIRRCYRKITKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M2</accession>
    <name>A0A087S1M2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RNA polymerase Rpc34 subunit protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19626">
        <property type="protein sequence ID" value="KFM19626"/>
        <property type="gene ID" value="AAA799P11_00615"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.602"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="119" mass="13859" checksum="8CD99AF2EA2F8808" modified="2014-10-29" version="1">MERLTNKVYDILAERESEGMFQSELWKKLKLTSRDGSRLALKLERMGTITREKILEKNRWTYKLILKKTPISTQSIENAPCLVCPVEQKCSLEGEISPRNCQFIEDWVIAEMKKPAKAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N9</accession>
    <name>A0A087S1N9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Translation initiation factor 2 subunit beta protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">eif2b</name>
        <name evidence="5" type="ORF">AAA799P11_00632</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-2-beta/eIF-5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19643">
        <property type="protein sequence ID" value="KFM19643"/>
        <property type="gene ID" value="AAA799P11_00632"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.618"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045196">
        <property type="entry name" value="IF2/IF5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002735">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016189">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016190">
        <property type="entry name" value="Transl_init_fac_IF2/IF5_Zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23001">
        <property type="entry name" value="PTHR23001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01873">
        <property type="entry name" value="eIF-5_eIF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00653">
        <property type="entry name" value="eIF2B_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100966">
        <property type="entry name" value="SSF100966"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75689">
        <property type="entry name" value="SSF75689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eIF2B_5" evidence="4">
        <location>
            <begin position="25"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="140" mass="16299" checksum="27552B5670EC79FD" modified="2014-10-29" version="1">MTKAEYESLLKRIQDKLGDTEKQTTARFELPVVDVMWEGQKTFLRNFSEFPKVLRRDPDKVLQYLSKEFAVPAERIGDKAMFIGRRDPDDFTRLFQIYVKDYLECPTCKSPDTKILKENRISFLICEACGAKSTLKGKYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P7</accession>
    <name>A0A087S1P7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19651">
        <property type="protein sequence ID" value="KFM19651"/>
        <property type="gene ID" value="AAA799P11_00640"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.626"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="228" mass="26288" checksum="ADA206E838CDBCC9" modified="2014-10-29" version="1">MEQPSSPPVDKQPRYIQVHSTLEFTRLVCALERAPRVSFLHDHDGRKILSVQMDVLKEKPIVYFTPLDHNGHYLRYGLKGGKEESEIVDTTSDSSKLYSPIVRIKSLPKTLKPGNGTLDRYQPIELEDMSSLAKLTWGFEDIPFPLFLFPHNDKWLLGVFMNFHEEGTSYFCHVLLDEDPQKPFLKFSTSNVIEPVFVDSPSEHGYSYIKIIKLKETHPLVDYAHLQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R0</accession>
    <name>A0A087S1R0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_00653</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TFIIB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19664">
        <property type="protein sequence ID" value="KFM19664"/>
        <property type="gene ID" value="AAA799P11_00653"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.639"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023486">
        <property type="entry name" value="TFIIB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="TF_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00782">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51134">
        <property type="entry name" value="ZF_TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIB-type" evidence="7">
        <location>
            <begin position="4"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="40"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="298" mass="33156" checksum="CD6F8E57DAD31612" modified="2014-10-29" version="1">MSLQETKCPRCGKNTLVTDVESQEVFCSKCGMVINEKTNDTRPERSFSDSPVNKSHTGDKTSLMRHDRGLSTVINPLDKDSSGTPLSASMKSSLKRMRQWDNRSRVKSNDERNLQQALLELTKIKEKLSLPDAVAEKASYIYRKALEKKLIRGRSIVSLVAACLYTACRESETPRTLSEVATTIGIKRKEISATYRLIFRELDLKMPVVDSVSCIAKIASNAKVSEKAKRRAVKILKHAEKQNALAGKHPMGVAASALYIACINTQENQTQKDIADAAGITEVTIRNRCKSLREILDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R4</accession>
    <name>A0A087S1R4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00657</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19668">
        <property type="protein sequence ID" value="KFM19668"/>
        <property type="gene ID" value="AAA799P11_00657"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035923">
        <property type="entry name" value="TT1751-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103247">
        <property type="entry name" value="SSF103247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="53" mass="5855" checksum="6B3ABA533D27C601" modified="2014-10-29" version="1">MLPCTIAVYEKNGDNFISLAKPTELLSIASNTELESMGKEIETKLIQVIDDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S0</accession>
    <name>A0A087S1S0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Na antiporter protein</fullName>
            <ecNumber evidence="6">3.2.1.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">napA</name>
        <name evidence="6" type="ORF">AAA799P11_00663</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.20" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19674">
        <property type="protein sequence ID" value="KFM19674"/>
        <property type="gene ID" value="AAA799P11_00663"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.652"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032450">
        <property type="term" value="F:maltose alpha-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006812">
        <property type="term" value="P:cation transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="102"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="128"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="161"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="195"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="314"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="346"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="376"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="5">
        <location>
            <begin position="15"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="404" mass="42506" checksum="FBF7C63CE2F8B1BA" modified="2014-10-29" version="1">MVSEFDVIPTIIGVLFLVLPALLLGRVCAHFKISEVVGFVFTGIVLGPTALGGIIPIFERPIVELNEVMLALWQISGIIILFSAGLHFTFHDLIKAGPKAAIIGMFGVIVPLITGYFVMLWMGFDWTVAVLVGATLSATSIAVSVVILEELGKEKTKEGNILVNAAVLDDVLGLAILSAVISIVALNTIPTIESIAITTITEIGFWVLILLGAVYLLPKIVHVVSKTHPTTLEARGTRQGAALGSAFGLAAIAASLGLNPIVGAFAAGMGLAGSKLAVQVREFVGRLKVIVAPLFFAVIGAHVDITQISSINWILFAVILGVAVFSKVLGCGIPASILLKSKKRGFLIGYGMVARGEVAFIVAGIGLAFSVLSDEIYSTIVFVILATIFIAPILLRNAFKVDLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1V7</accession>
    <name>A0A087S1V7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thioldisulfide interchange protein DsbD</fullName>
            <ecNumber evidence="3">1.8.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dsbD</name>
        <name evidence="3" type="ORF">AAA799P11_00451</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.8" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19711">
        <property type="protein sequence ID" value="KFM19711"/>
        <property type="gene ID" value="AAA799P11_00451"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.431"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047134">
        <property type="term" value="F:protein-disulfide reductase (NAD(P)) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003834">
        <property type="entry name" value="Cyt_c_assmbl_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02683">
        <property type="entry name" value="DsbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="213"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="246"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="294"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="DsbD" evidence="2">
        <location>
            <begin position="55"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="322" mass="34644" checksum="8A3B6BDBC81D726A" modified="2014-10-29" version="1">MTQQATGAITKNVLLGILFVLFSVFVLGIIYLSTVDLIEEQVSATSYASWMLIAYAAGLSMIILPCTLPMVFIIVPLCMGQGYKKGLSIAVLFGIGLIITITAYGVVVALLGQYTGIDHATRVMWFFAGAIAFTFGLSELKLLNLKLPSYGGTPKFIEKRGDKLKPLLMGLLLGNAGVGCPNPFFYFLLTYIIGTGSVVVGGSLGLIHGIGRAIPLIFIAILAILGISATQSLVKKRIAVEKATGFGLLGVGAFILLLGLFGHSWWERSPIHLAWNEIMPLFGMESELTMGAHVIMPIPWTMLALLIAIPAIGYWVKEKYGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1V9</accession>
    <name>A0A087S1V9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper-translocating P-type ATPase protein</fullName>
            <ecNumber evidence="2">1.14.13.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00453</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.-" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19713">
        <property type="protein sequence ID" value="KFM19713"/>
        <property type="gene ID" value="AAA799P11_00453"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.620.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012348">
        <property type="entry name" value="RNR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011017">
        <property type="entry name" value="TRASH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007029">
        <property type="entry name" value="YHS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04945">
        <property type="entry name" value="YHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00746">
        <property type="entry name" value="TRASH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TRASH" evidence="1">
        <location>
            <begin position="4"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="49" mass="5712" checksum="C8E6AF44C1EE7297" modified="2014-10-29" version="1">MTKDLVCGMDIDEKTAAKKEHNGKTYHFCSPTCQWAFEMDPEQFIQKET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X4</accession>
    <name>A0A087S1X4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00468</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19728">
        <property type="protein sequence ID" value="KFM19728"/>
        <property type="gene ID" value="AAA799P11_00468"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="80" mass="9025" checksum="9B2B0C7038C63261" modified="2014-10-29" version="1">MNPSNSSTDEKLSAMAGFSVISERTWNTIPCFRIVSMFEPTREIVINSVIIKTPNIVAALVATYLFILNNPKYENQFIII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z2</accession>
    <name>A0A087S1Z2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CdvA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00491</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19746">
        <property type="protein sequence ID" value="KFM19746"/>
        <property type="gene ID" value="AAA799P11_00491"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.469"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041461">
        <property type="entry name" value="CdvA_CC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18822">
        <property type="entry name" value="CdvA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CdvA" evidence="2">
        <location>
            <begin position="95"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="231"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="231"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="288"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="303" mass="34011" checksum="708DB63364270A84" modified="2014-10-29" version="1">MLVIRISKVTHMTHDDIEIIGKNVKDMYGTFMGKVAGTITDIDGSIQSVGIDCGSQGLQQIQYEQLVVQGDVVIFIPKWRLDSQRLIREKQLTIRRLKALIDIVSENDDMKEDAEIIHEKYKSKLVSLDETESEIKAKLEARLTELDEQMKSAKMLSFDAKVQYKSNEISEETFETVKACTTEVIEHVTHEVSEIENVKSRIADLSLEVQEITAPPTPDIQESAVSYLETSEPQQVVQTSLPEAPTEPVTTPSEPIEAEATPIPEPPTESEVTFAFPEPPQQVTAETPKDDNDNDWLARMEAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S209</accession>
    <name>A0A087S209_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00508</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19763">
        <property type="protein sequence ID" value="KFM19763"/>
        <property type="gene ID" value="AAA799P11_00508"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="48" mass="4904" checksum="8E29CE20FB99A8EA" modified="2014-10-29" version="1">MSNMANQKCVSCGIGFFSPTGSDKCSRCAGKETEGHGGHDSCGCGHSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S219</accession>
    <name>A0A087S219_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Photosystem I assembly protein ycf3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00518</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19773">
        <property type="protein sequence ID" value="KFM19773"/>
        <property type="gene ID" value="AAA799P11_00518"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.500"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001440">
        <property type="entry name" value="TPR_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="34"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="68"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="102"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="373" mass="43353" checksum="B91D8018C3AC5E64" modified="2014-10-29" version="1">MKKPFGKKSEEKKEEPKVEKKAEETALVDIDYNRKKLFKKGVNLMADEKLEEAITVFEQALRIDPDNVETLLKLGYARFHIDDHHEALKVYDRVLDIDVTNPEAWNLKGLVHYEQKNYSKALDSVEKAIETDPTYGMAWYNKACFLSLLNQVPESLEALKRSIEIDVKNARKSIRDKDFVNVRVEEGFKRIQEVVVLESVRQGYHTIGSIVWTTFLDKKDAEDALRKLLEKGLIVQNEKRDGLSRIPVYDLAPNVAEKMGKEKKGLFGITRKKLPKPVKNLKELSQAIQIAKEAIEEENSEKAIEIFDEFIDPKKSGEQMIENFFDEHREIRLWKIRLKDRGDDYIAENKEKMLVLFDNVEVTITKKLRNEIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S223</accession>
    <name>A0A087S223_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00522</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19777">
        <property type="protein sequence ID" value="KFM19777"/>
        <property type="gene ID" value="AAA799P11_00522"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.504"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="256" mass="30374" checksum="1E47068EC62677E5" modified="2014-10-29" version="1">MKTSKIIIYDEPTVPEIRIEKLEKFLKDIFHTDVEVRANFFEDADEKLFQEISTSRIFELKKPFSKHIPTESEIEMERENIDNSQNEEKILYDGFEFQKIISKFIPTNEQNQDTLHIVLTNKLTCTFDESDFRYHARSLIGTNPSIISTTGIIEAPAKPKEYYLELMTNFSKENTDKIKEKFKGEFLEYHDPRLSEIVKGYMLQSIIYYETGEAFCENKECRLYNAHWQKELLHSQLNKKFCSKHEKSFKKLISYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A7</accession>
    <name>A0A087S2A7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Delta-aminolevulinic acid dehydratase</fullName>
            <ecNumber evidence="10">4.2.1.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">hemB</name>
        <name evidence="12" type="ORF">AAA799P11_00395</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>2 5-aminolevulinate = H(+) + 2 H2O + porphobilinogen</text>
            <dbReference type="Rhea" id="RHEA:24064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58126"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="4.2.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homooctamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the ALAD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.24" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19861">
        <property type="protein sequence ID" value="KFM19861"/>
        <property type="gene ID" value="AAA799P11_00395"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.380"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004655">
        <property type="term" value="F:porphobilinogen synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001731">
        <property type="entry name" value="ALAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030656">
        <property type="entry name" value="ALAD_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11458">
        <property type="entry name" value="PTHR11458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00490">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001415">
        <property type="entry name" value="Porphbilin_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00144">
        <property type="entry name" value="DALDHYDRTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01004">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00169">
        <property type="entry name" value="D_ALA_DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="5 10 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="7">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="7">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001415-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001415-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001415-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="KFM19861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="326" mass="35975" checksum="C8A750BBA279A205" modified="2014-10-29" version="1">MSFPTRRLRRLRISEKMRELVQQTTLSPKDFICPVFVQEDLKTRTKVESMTAIERLPLDDVNDEVGTISDLGIPAIMLFGIPTQKDDAGSSAFDDNGIVQKAISQIRENFGNKIAIMADVCLCQFTSTGHCGIIQGNKIDNDTSLDTLSKIAVSQAKAGVDTVSPSAMMDGQVAAIRKALDDEGFSDVSIMSHSAKHRSNFYAPFRDAAECAPKFGDRKTYQVPYTNAREAMMEVETDINEGVDIVMIKPALSYLDLIAETRRKFNVPVAAYSVSGEYALVKAASQLGYVNEKDMTEEILYSIKRAGADMIVTYFAKSASRFLQES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C7</accession>
    <name>A0A087S2C7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Translation initiation factor 1A</fullName>
            <shortName evidence="1">aIF-1A</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">eIF1A</name>
        <name evidence="1" type="synonym">eif1a</name>
        <name evidence="5" type="ORF">AAA799P11_00415</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the eIF-1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19881">
        <property type="protein sequence ID" value="KFM19881"/>
        <property type="gene ID" value="AAA799P11_00415"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.400"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd05793">
        <property type="entry name" value="S1_IF1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00216">
        <property type="entry name" value="aIF_1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001253">
        <property type="entry name" value="TIF_eIF-1A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21668">
        <property type="entry name" value="PTHR21668"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01176">
        <property type="entry name" value="eIF-1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00652">
        <property type="entry name" value="eIF1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00523">
        <property type="entry name" value="eIF-1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1 2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1-like" evidence="4">
        <location>
            <begin position="13"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="12101" checksum="F5F110810024226B" modified="2014-10-29" version="1">MGKRQVKSESALKEIRLPEEGELFGRVLKMLGGENVLIKCTDNVTRRGRIRGKLKRRVWIRDNDIVIIAPWDFNESEKGDIVWRFTLPQVEWLKENGHIPKDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E4</accession>
    <name>A0A087S2E4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydroxymethylpyrimidine-phosphomethylpyrimidine kinase protein</fullName>
            <ecNumber evidence="2">2.7.1.49</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">thiD</name>
        <name evidence="2" type="ORF">AAA799P11_00437</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.49" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19898">
        <property type="protein sequence ID" value="KFM19898"/>
        <property type="gene ID" value="AAA799P11_00437"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.417"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008902">
        <property type="term" value="F:hydroxymethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008972">
        <property type="term" value="F:phosphomethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004789">
        <property type="term" value="F:thiamine-phosphate diphosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01169">
        <property type="entry name" value="HMPP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045029">
        <property type="entry name" value="HMP/HMP-P_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004399">
        <property type="entry name" value="HMP/HMP-P_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013749">
        <property type="entry name" value="PM/HMP-P_kinase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019293">
        <property type="entry name" value="ThiN"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20858">
        <property type="entry name" value="PTHR20858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08543">
        <property type="entry name" value="Phos_pyr_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10120">
        <property type="entry name" value="ThiP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00097">
        <property type="entry name" value="HMP-P_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phos_pyr_kin" evidence="1">
        <location>
            <begin position="10"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="432" mass="47429" checksum="00287897E2BBBA03" modified="2014-10-29" version="1">MNILSIGGSDPSSGAGIQSDIRVFSKLKVHTLTAITAITSQNTSKFGIVEPVSPNMLKKQLESLFSDFKVDGIKIGMVYNSKIIKVIHQQLNKLKIPIVVDPVIKSTTGGSLIENNAKKDFQKYIIPLATIITPNKSEAEFLTKMKISAKNTPEKVAKTIQDMGAKSVVITGFKEDKNTVEDFVLEKNKKYIISGKKIPKINHGSGCNHSAAIVYSLARKKNVKESLFFAKKFTQNSIKNARSIGKGIVITDMGNKGIEEELSSAITKFTNIKGIYKNIPECQTNFVFSKRKPKSTKDVLGISGRIVKAGKNVLVAGDLEYGGSKHVATALLSMNKKHPEICSAINLKYQNSTLSKIKNSKLTVSSYDRSKEPKNVKIQGSTIRWGISSAIKNSKRIPDVIYHKGDFGKEPMIIVFGKTPENVLEKILKIKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L7</accession>
    <name>A0A087S2L7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycine C-acetyltransferase protein</fullName>
            <ecNumber evidence="2">2.3.1.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.29" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19971">
        <property type="protein sequence ID" value="KFM19971"/>
        <property type="gene ID" value="AAA799P11_00275"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.268"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008890">
        <property type="term" value="F:glycine C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="45"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="379" mass="42507" checksum="CDD79494E1920C38" modified="2014-10-29" version="1">MKKLASRHKLDFVDAELQAIKQNNLYRKLRYGKAQGAYITINGKKLLNLCSNDYLGIPITKIQANQLQSSSRLVSGNDESYKKLEKALAKHKSQQNSLIFPTGYMANLGSISAIAKKGDLILSDELNHASIIESCKLTDARVSIYKHNDMQDLQIKLKQKAKNKFIITEGVFSMDGDLSSLKQITEIAEKTNAITIVDDAHGDFVIGKDGKGTPNHFHVGKKIDLYISSLSKGLGSFGGYIATQNNVVDLCINKSMSFIYTSALPSFLVKHSLKRFESNREKQKKKLEKNTKSLSKGLREIGFEINSESQIIPIIVGNEKSAMDFGKFLFDNGIFVQPIRYPTVPKNQARLRISVTAWLKDKDIERALEIFQKSYVKFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L9</accession>
    <name>A0A087S2L9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Adenosylmethionine-8-amino-7-oxononanoate aminotransferase</fullName>
            <ecNumber evidence="4">2.6.1.62</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">7,8-diamino-pelargonic acid aminotransferase</fullName>
            <shortName evidence="4">DAPA AT</shortName>
            <shortName evidence="4">DAPA aminotransferase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">7,8-diaminononanoate synthase</fullName>
            <shortName evidence="4">DANS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Diaminopelargonic acid synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">bioA</name>
        <name evidence="6" type="ORF">AAA799P11_00277</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only aminotransferase known to utilize SAM as an amino donor.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(8S)-8-amino-7-oxononanoate + S-adenosyl-L-methionine = (7R,8S)-7,8-diammoniononanoate + S-adenosyl-4-methylsulfanyl-2-oxobutanoate</text>
            <dbReference type="Rhea" id="RHEA:16861"/>
            <dbReference type="ChEBI" id="CHEBI:16490"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:149468"/>
            <dbReference type="ChEBI" id="CHEBI:149469"/>
            <dbReference type="EC" id="2.6.1.62"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; biotin biosynthesis; 7,8-diaminononanoate from 8-amino-7-oxononanoate (SAM route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.62" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19973">
        <property type="protein sequence ID" value="KFM19973"/>
        <property type="gene ID" value="AAA799P11_00277"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.270"/>
    <dbReference type="UniPathway" id="UPA00078">
        <property type="reaction ID" value="UER00160"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004015">
        <property type="term" value="F:adenosylmethionine-8-amino-7-oxononanoate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009102">
        <property type="term" value="P:biotin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00834">
        <property type="entry name" value="BioA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005815">
        <property type="entry name" value="BioA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00508">
        <property type="entry name" value="bioA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-0093">Biotin biosynthesis</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4 5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="4">
        <location>
            <begin position="103"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="4">
        <location>
            <begin position="305"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="304"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="399"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Participates in the substrate recognition with KAPA and in a stacking interaction with the adenine ring of SAM" evidence="4">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="437" mass="49687" checksum="FE34DE757CD4258C" modified="2014-10-29" version="1">MKSSVWHPNTQMNEWNSFDKITKAKGMWLVDSKGHKMIDAVASMWCNVWGHSNPQLVKTITNQSKKLQHSSMFNITNEPAEQLAVNLVQISPGMHKVFYSDNGSSAMEIAIKIALQYWKNIGEKKTEIATVENGYHGDTFGAMSVGYVPQFFCKFKKQLFQTTQFPVPNKYRLPKGYTVLDYQNECLEKIEKKFSKNNKIAAFVMESGAQMAGGVIIYPKGFQRKISQLCKKYNVLFVLDEIATGFGRLGSMIQYQEQKSTPDIVAYGKMLTGGYLTMAATLANKKVYDSFSGEFNDWKHLFHGHTYTGNPIAASVANENIKMYKKNNLIKKIQKTSEVFEEWHDEIFEIDIVGDIRHKGMLMGIELVTDRKKKTPIHPKKSINKIFYETGKKNGIYLRTLGNIVMLVPPLAISEKELNSLLKRTIKTIKDAKSKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N5</accession>
    <name>A0A087S2N5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glyceraldehyde-3-phosphate dehydrogenase protein</fullName>
            <ecNumber evidence="1">1.2.1.59</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gap</name>
        <name evidence="1" type="ORF">AAA799P11_00293</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.59" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19989">
        <property type="protein sequence ID" value="KFM19989"/>
        <property type="gene ID" value="AAA799P11_00293"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.286"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043891">
        <property type="term" value="F:glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="350" mass="39413" checksum="3D3AEBE7B2348501" modified="2014-10-29" version="1">MKKVFVNGYGSIGSRITAFLKDDPEISVIGVGKYSPDDDVNVAISRGLDVYVPKRKLDDFKDFKISGSIESALDQSDLVIDAAPGGHGYKNKKNLYEPRNLPAIYQGGESAIGNEAVSDLLFNSRANYDLAIGKPHVMQGSCNVTGMGRILEPLRDKFGDDLIRFDVTLVRRWADIEQTEKKLSDTIEMTEKPHHGDDVKLYFGKDAPLYVRAIKVPTRQMHLHIMDIRFKDTAPKPSEIHELFADEFGVATLWTAKGTKDVRDYAQNMGFNFTDTNMIHIHANMTTSIGDTVQIMYSDDQTGIVIPENHMLMQAMLFEKSYADAFAHTESIFHMVEKKQKLQEHFAKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P9</accession>
    <name>A0A087S2P9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative acetyl-CoA acyltransferase protein</fullName>
            <ecNumber evidence="3">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00307</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20003">
        <property type="protein sequence ID" value="KFM20003"/>
        <property type="gene ID" value="AAA799P11_00307"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.301"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="1">
        <location>
            <begin position="8"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="2">
        <location>
            <begin position="247"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="369" mass="40074" checksum="5539790E11EE8297" modified="2014-10-29" version="1">MNKVGIAAYGITPFTKDDKKIESIILESAKNLFQNNSNIQKENIDTVLVSTNNNSKYLAPVLSESLGIQPKTAHSIENLCNSGTNSIVSAYSYIAAGLTDMVLVSGAERYDSPGQILEWDNSRGEFKHPIFWASIFTSSYKRKFNVTDEQLAIVPVKNHNQAQNNPNALSKRTYSIQDVMDSKKITDDIKLLDCSRSCTGSASLVLASENMLKKITDQPVWISGIGQKTISAGFTKNESFYSMESTKTATQAALQMADKKIQDIDVAEVHDAFSVCEPMALEALGLSDPGDGLTLVNEFYETKNLKINPRGGLIGCGHPLGATGIAQTIEITQQLQSNANNRQVENANVGLVHNMSAAATSSTILVLEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q5</accession>
    <name>A0A087S2Q5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Threonine ammonia-lyase</fullName>
            <ecNumber evidence="5">4.3.1.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">tdcB</name>
        <name evidence="9" type="ORF">AAA799P11_00314</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-threonine = 2-oxobutanoate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:22108"/>
            <dbReference type="ChEBI" id="CHEBI:16763"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="EC" id="4.3.1.19"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-isoleucine biosynthesis; 2-oxobutanoate from L-threonine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the serine/threonine dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.19" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20009">
        <property type="protein sequence ID" value="KFM20009"/>
        <property type="gene ID" value="AAA799P11_00314"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.307"/>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00054"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004794">
        <property type="term" value="F:L-threonine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006567">
        <property type="term" value="P:threonine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04886">
        <property type="entry name" value="ACT_ThrD-II-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044561">
        <property type="entry name" value="ACT_ThrD-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000634">
        <property type="entry name" value="Ser/Thr_deHydtase_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005789">
        <property type="entry name" value="Thr_deHydtase_catblc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01127">
        <property type="entry name" value="ilvA_1Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00165">
        <property type="entry name" value="DEHYDRATASE_SER_THR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0412">Isoleucine biosynthesis</keyword>
    <keyword evidence="9" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="8">
        <location>
            <begin position="327"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="402" mass="42815" checksum="8EB7E6120BEB4BD8" modified="2014-10-29" version="1">MNPTFAEIEKANSMRGNEIKKTPLIHSPTFSDLTKSEVYLKAEFRQKTGSFKIRGAYYKIKSLSDDEKKHGVVAASAGNHAQGVALASALEEIPCTIVMPKNASPAKVAATRGYGANVILEGINYDESSAKAKEIANETGATMIHAFDDPQIIAAQGVIGLEVLEDLPEVEEVYLPIGGGGLAAGTLIAIKENNPNIKVIGVQSRSFPSMYESIKQGAITASGGARTIADGISVKVPGQLTFSIINELIDEIVLVDDTEITKAMFLLMERMKFVVEPAGAISLAYLISKKPAPGKKVVAVLAGGNVDMYLLGQIVDKGLAAMGRLLKLSILLPDRPGAFKDIVDEITLANANIVEVVHDRLSSNVNAGSAAVTMNLETQGKEQADALIEALRRKNVQFTLLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q7</accession>
    <name>A0A087S2Q7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00316</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20011">
        <property type="protein sequence ID" value="KFM20011"/>
        <property type="gene ID" value="AAA799P11_00316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="40" mass="4568" checksum="6BCFA5C1767620B5" modified="2014-10-29" version="1">MTDSDFTCNDCEGEIVEYYNEGYHGKRGKCAQCGQEFPLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R8</accession>
    <name>A0A087S2R8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00327</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20022">
        <property type="protein sequence ID" value="KFM20022"/>
        <property type="gene ID" value="AAA799P11_00327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="65" mass="7373" checksum="5DE23DF3F7B2D5AA" modified="2014-10-29" version="1">MESQKKQLGIGTGILTNCKKCLEDRHDLCLNNGCKCAIEHQIQNPYHEKKEILANVLTEFSEVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S5</accession>
    <name>A0A087S2S5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00334</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20029">
        <property type="protein sequence ID" value="KFM20029"/>
        <property type="gene ID" value="AAA799P11_00334"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.328"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="15"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="7968" checksum="EE7559BB6CB531E8" modified="2014-10-29" version="1">MVRAIILVKSPKKLIAARLRKVTSVSDSFPTSGQFDAVAIIDVEQLSEIKEVANKIQKINGVERTETMVEVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S9</accession>
    <name>A0A087S2S9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00338</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20033">
        <property type="protein sequence ID" value="KFM20033"/>
        <property type="gene ID" value="AAA799P11_00338"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="32" mass="3657" checksum="6456B61E71E04A23" modified="2014-10-29" version="1">MSQEHLKILDEVSKIVNEAPKLFDALGKDSWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T3</accession>
    <name>A0A087S2T3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">5'-deoxynucleotidase</fullName>
            <ecNumber evidence="5">3.1.3.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00347</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyribonucleoside 5'-phosphate + H2O = a 2'-deoxyribonucleoside + phosphate</text>
            <dbReference type="Rhea" id="RHEA:36167"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18274"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:65317"/>
            <dbReference type="EC" id="3.1.3.89"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.89" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20037">
        <property type="protein sequence ID" value="KFM20037"/>
        <property type="gene ID" value="AAA799P11_00347"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.336"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002953">
        <property type="term" value="F:5'-deoxynucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039356">
        <property type="entry name" value="YfbR/HDDC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11845">
        <property type="entry name" value="PTHR11845"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13023">
        <property type="entry name" value="HD_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HDc" evidence="6">
        <location>
            <begin position="28"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="177" mass="20462" checksum="263E1C4F25334D92" modified="2014-10-29" version="1">MTEDFLKTAANLKKISRQGWIDKLSIKNPESVADHTFSMAVIGMVISDLENLNSEKILKMVLLHDLAESEIGDIVPEKMSVEEKQRLENSAFEKISKSLPEQLVTKYTKIWKEYQENNSFESQIVHQIDKLEMALQAKIYQSQGYPKEKLETFLDTARETITHPRLKELFTKITSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T4</accession>
    <name>A0A087S2T4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00348</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20038">
        <property type="protein sequence ID" value="KFM20038"/>
        <property type="gene ID" value="AAA799P11_00348"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.337"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="74" mass="8709" checksum="BE16008159AA2875" modified="2014-10-29" version="1">MSETEKDELIDAQKQVIGILFEVIKRLQANSDLDEEYFEIITKEEKDESRLNEILTQRKENAKIVGRLLEQLET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2U6</accession>
    <name>A0A087S2U6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aspartate--tRNA(Asp/Asn) ligase</fullName>
            <ecNumber evidence="6">6.1.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Aspartyl-tRNA synthetase</fullName>
            <shortName evidence="6">AspRS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Non-discriminating aspartyl-tRNA synthetase</fullName>
            <shortName evidence="6">ND-AspRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">aspS</name>
        <name evidence="8" type="ORF">AAA799P11_00360</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + L-aspartate + tRNA(Asx) = AMP + diphosphate + L-aspartyl-tRNA(Asx)</text>
            <dbReference type="Rhea" id="RHEA:18349"/>
            <dbReference type="Rhea" id="RHEA-COMP:9710"/>
            <dbReference type="Rhea" id="RHEA-COMP:9711"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 3 Mg(2+) cations per subunit. The strongest magnesium site (Mg1) is bound to the beta- and gamma-phosphates of ATP and four water molecules complete its coordination sphere.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.23" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20050">
        <property type="protein sequence ID" value="KFM20050"/>
        <property type="gene ID" value="AAA799P11_00360"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.349"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004815">
        <property type="term" value="F:aspartate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050560">
        <property type="term" value="F:aspartate-tRNA(Asn) ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006422">
        <property type="term" value="P:aspartyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02075">
        <property type="entry name" value="Asp_tRNA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004523">
        <property type="entry name" value="Asp-tRNA_synthase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43450">
        <property type="entry name" value="PTHR43450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00458">
        <property type="entry name" value="aspS_nondisc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 6 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="7">
        <location>
            <begin position="145"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="region of interest" description="Aspartate" evidence="6">
        <location>
            <begin position="200"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="221"/>
            <end position="223"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="229"/>
            <end position="231"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="359"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="362"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="366"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="407"/>
            <end position="410"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for tRNA non-discrimination" evidence="6">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM20050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="436" mass="49354" checksum="751A57AD3CF9A1CA" modified="2014-10-29" version="1">MIETELGTLRRSHYSDEINSSMDGTQVTVMGWVLTIRGHGNISFATIRDKNGDVSIVAKKGDCPDEIREKISSLKAHSSIAITGNVKSSEKAPSGYEIIPTELRVFSEVEKIPPFEPIAKTVKNIDTRLEVRPIDLRRKVLQHIFNTRSLVLKSIRSYFNDQNFVEINTPKMIATATEGGAALFPIFYYNKEAFLAQSPQLYKEQLTMSFEKVFEIAPIFRAEPSRTNRHLAEAISIDLEEAFVDYNDVMGRIEEIIKISIKTVNEYAKNNPDAEFTIPEVPDTIPQYSYDDLVDKMQKAGAKTEWGDDLYPSNLKKIGLEGFYFIKDWPLAPKPFYVKDSKSNPKISESFDLMFGDLELSSGSTRIEKRDELAERMKNKGMKTDAFEYHLGAFDYGVPPHAGCGIGLERLIMALTGTENIRDVTFYPRDVDRLTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2V0</accession>
    <name>A0A087S2V0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative phosphite transport system permease protein HtxC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">htxC</name>
        <name evidence="6" type="ORF">AAA799P11_00364</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20054">
        <property type="protein sequence ID" value="KFM20054"/>
        <property type="gene ID" value="AAA799P11_00364"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.353"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005769">
        <property type="entry name" value="PhnE/PtxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017797">
        <property type="entry name" value="Phosphnate-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30043:SF1">
        <property type="entry name" value="PTHR30043:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01097">
        <property type="entry name" value="PhnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="63"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="97"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="125"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="59"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM20054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="263" mass="28915" checksum="E5D2E1432168CC4E" modified="2014-10-29" version="1">MTPKNNIIIGIIIALLVAASYNVDANPVDFVQGLPNLGIIAEEMLEVESKYIPTALWAMFETIQMAFIGTIVGVAIALPLSMFAARNLNSKYVYAPIRALLAAIRTFPSILWAILFVIMVGLGPFAGVLAIIMYTIGFVAKLQYEAIETIDSDPMDAVSSIGVSKWQLIRYVVIPESASHLLSQMLYMFDYNVRQTSILGLVGAGGIGFYIINYIKFFEYGKAAVFMLVVLAAVLVIDWVSVKIRDKYIIKSQHGMEVTAKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X5</accession>
    <name>A0A087S2X5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein-L-isoaspartate O-methyltransferase</fullName>
            <ecNumber evidence="3">2.1.1.144</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pcm</name>
        <name evidence="3" type="ORF">AAA799P11_00150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.144" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20079">
        <property type="protein sequence ID" value="KFM20079"/>
        <property type="gene ID" value="AAA799P11_00150"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025282">
        <property type="entry name" value="DUF4214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006342">
        <property type="entry name" value="FkbM_mtfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13946">
        <property type="entry name" value="DUF4214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05050">
        <property type="entry name" value="Methyltransf_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01444">
        <property type="entry name" value="fkbM_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DUF4214" evidence="2">
        <location>
            <begin position="11"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="Methyltransf_21" evidence="1">
        <location>
            <begin position="113"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="312" mass="36149" checksum="05D875E276DC34AF" modified="2014-10-29" version="1">MNNSDSLQQKISELYRTILLREPDRDGIKHWTHQIYSGIETLQSLKEKLMNSDESAIINDFLNGYVITNDGIKLFLNNKDNVLSRDIAFHKVWEPEITTLVKEIIKKDQIVVDVGSNIGYFTTLFSKLVGDSGKVYSFEPAPKNFELLKKNVSFNNLKNVSIYPMAASDASERKNLFLSTWNFGDNRLFEKPRDERDQDRETIEVEAIRLDEITQEKIDFIKIDVQGFELQVINGAKKLFDNNNDLKIIFEFYPHLLKLNGVKPEDLLYQLVKMGYNIYDIGAGNNLINYNIENICKRYSMCSSLDLFCEKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2X6</accession>
    <name>A0A087S2X6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">FkbM family methyltransferase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00151</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20080">
        <property type="protein sequence ID" value="KFM20080"/>
        <property type="gene ID" value="AAA799P11_00151"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.150"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025282">
        <property type="entry name" value="DUF4214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006342">
        <property type="entry name" value="FkbM_mtfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13946">
        <property type="entry name" value="DUF4214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05050">
        <property type="entry name" value="Methyltransf_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01444">
        <property type="entry name" value="fkbM_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DUF4214" evidence="2">
        <location>
            <begin position="11"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="Methyltransf_21" evidence="1">
        <location>
            <begin position="132"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="312" mass="36935" checksum="484A7A49E808DD69" modified="2014-10-29" version="1">MKDYESILKKYYREYLNREPDLEGFRYFLSLLKNGSIDEKALKNEFVNSPEYKINQLTLQYEKNLKIKIEKNDKIFYVDSSNNANFWAQLQVGIWEPETFKIFDIFLDKNHSYIDLGSWIGPTVLYGCQIAKFCYAIEPDPVAFRYLKNNVEINHTLCSQIRLSNQCITNFSGTVHLTPKDKKGGDSMSSIVFEKSSKSWKVQGITFQEFVLENSIKDCNFIKMDIEGGEFLVLPNMKEFLHREKPTIHLSLHTPLIKNPHDYLKNIYEIILEYDFVYDNKLKNLEKEFIFREENFNKFFDIVITNKNIHEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z3</accession>
    <name>A0A087S2Z3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pseudaminic acid synthase protein</fullName>
            <ecNumber evidence="3">2.5.1.56</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pseI</name>
        <name evidence="3" type="ORF">AAA799P11_00168</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.56" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20097">
        <property type="protein sequence ID" value="KFM20097"/>
        <property type="gene ID" value="AAA799P11_00168"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.167"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050462">
        <property type="term" value="F:N-acetylneuraminate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016051">
        <property type="term" value="P:carbohydrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036732">
        <property type="entry name" value="AFP_Neu5c_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013132">
        <property type="entry name" value="Neu5Ac_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03102">
        <property type="entry name" value="NeuB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08666">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51269">
        <property type="entry name" value="SSF51269"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NeuB" evidence="1">
        <location>
            <begin position="40"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="SAF" evidence="2">
        <location>
            <begin position="294"/>
            <end position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="353" mass="39765" checksum="828732EE8F7AB377" modified="2014-10-29" version="1">MKNNQELPFDNWEHTFVIAEAGSNWRVGEYQKDIAQAKQLIDIAKKAGADAVKFQTYKSKTVYVENAGKSDYLAESGIQESINDIFENLSMPYEMIPIISKYCEKKNILFMSTPFSIEDAKAIDPFVKIHKIASFEINHIPLLEFLAKTQKPIIISTGASNETEIKFAIDIIKKNGNLKIGLMQCTSKYPAPLSTLNLSAIPNMKKTFEVPVGFSDHSLDPIIAPLCAVGFGATVVEKHFTNDKKLPGPDHSFALEPKELEQMIKSIRSADKTKGLGKKEVLDEEKELREFATRSLQAIKNIKKGEIFRFEENFSVLRSGKRKRGLDARYLYEVDGKTSIRNIEKGDGITEYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S340</accession>
    <name>A0A087S340_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Quinoprotein glucose dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.5.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20144">
        <property type="protein sequence ID" value="KFM20144"/>
        <property type="gene ID" value="AAA799P11_00215"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.214"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008876">
        <property type="term" value="F:quinoprotein glucose dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012938">
        <property type="entry name" value="Glc/Sorbosone_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011041">
        <property type="entry name" value="Quinoprot_gluc/sorb_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07995">
        <property type="entry name" value="GSDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50952">
        <property type="entry name" value="SSF50952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GSDH" evidence="1">
        <location>
            <begin position="49"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="363" mass="40122" checksum="4EDF12DD2F1D9871" modified="2014-10-29" version="1">MDKKISIAVVIVAVAFSVYTLTLPSDPIPLPEPNFNSKNDSVEILAENLDKPRSIAVSENRIFVTEKDGSIIVVENDVQLESPLVTLHSADVFDGGLLGIALHPNFVENHYIYVFLTYEENDTLWNKILRITESQNKLQDAETIFDKIPGSSFTNGGFIKFGHDNKLYVGTGAISDSSHLPQDLDSLSGKILRINDDGSIPEDNPFSNSPVYSLGHRNPQGMTWDDDGNLYVAEFGPEKNDEINLILAGKNYGWPEQECSGNENFENAVLCYDPSIEPGGILFYSGDKFDFEFPFIMASMRASNVYQVDFEEGLSSQKSILSGIGRVRDVVQGPDGYLYVITSNTDGKGFPAANDDKLLRILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S344</accession>
    <name>A0A087S344_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">4-hydroxybenzoyl-CoA thioesterase protein</fullName>
            <ecNumber evidence="3">3.1.2.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00224</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.23" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20148">
        <property type="protein sequence ID" value="KFM20148"/>
        <property type="gene ID" value="AAA799P11_00224"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.218"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018739">
        <property type="term" value="F:4-hydroxybenzoyl-CoA thioesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040170">
        <property type="entry name" value="Cytosol_ACT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033120">
        <property type="entry name" value="HOTDOG_ACOT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11049">
        <property type="entry name" value="PTHR11049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51770">
        <property type="entry name" value="HOTDOG_ACOT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HotDog ACOT-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="161" mass="17847" checksum="3783FBB221DB9FD0" modified="2014-10-29" version="1">MSSEPNIQEKSPAESHAEVIVRMFPSDANPAGNVFGGEILKHIDMVAGIVAQRHSQSNAVTVSMDSVNFLKPVFVGNVLSLNARINYVHNSSMEIEVRAETEDIVTGIRTVTGTAFVTFVALDKNGKPMHVPKLSLKTDEDRVKFEEGKIRMEKRLKNRQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S357</accession>
    <name>A0A087S357_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00237</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20161">
        <property type="protein sequence ID" value="KFM20161"/>
        <property type="gene ID" value="AAA799P11_00237"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.231"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11428" checksum="587B410260EDDBE6" modified="2014-10-29" version="1">MADSLFGQIVAVRKFANGDIELDFYHDDIVTEYRYSSDPSRLGNFPKELAETLAFTLSTDICIEIFFGDDGTPTHVELEECDDEDEDDEEFDEDFVPEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S364</accession>
    <name>A0A087S364_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3,4-dihydroxy-2-butanone 4-phosphate synthase</fullName>
            <shortName evidence="3">DHBP synthase</shortName>
            <ecNumber evidence="3">4.1.99.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ribB</name>
        <name evidence="4" type="ORF">AAA799P11_00244</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>D-ribulose 5-phosphate = (2S)-2-hydroxy-3-oxobutyl phosphate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18457"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="4.1.99.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="3">Binds 2 divalent metal cations per subunit. Magnesium or manganese.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; riboflavin biosynthesis; 2-hydroxy-3-oxobutyl phosphate from D-ribulose 5-phosphate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the DHBP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.12" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20168">
        <property type="protein sequence ID" value="KFM20168"/>
        <property type="gene ID" value="AAA799P11_00244"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.238"/>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008686">
        <property type="term" value="F:3,4-dihydroxy-2-butanone-4-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017945">
        <property type="entry name" value="DHBP_synth_RibB-like_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000422">
        <property type="entry name" value="DHBP_synthase_RibB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00926">
        <property type="entry name" value="DHBP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55821">
        <property type="entry name" value="SSF55821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00506">
        <property type="entry name" value="ribB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0464">Manganese</keyword>
    <keyword evidence="2 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0686">Riboflavin biosynthesis</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="221" mass="24471" checksum="BD906AFF4438F547" modified="2014-10-29" version="1">MSLETALQSLKRGEFVLLFDSAGRENEIDMVVAAEFVTPEHVARMRQHAGGLLCIAIDNQFANSLDLKYMHEILSDSSISNKEMIMGLAPYGDHPTFSLSVNHYQTYTGITDNDRSLTIREMANIYNVENKQKKFVSSFKTPGHVPLLIASKGLLAARQGHTEMSVYLAQIAGLTPVTAICEMMDAETYTALSVDKAEKFAKQNGIPLIDGKELLEYAKVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S372</accession>
    <name>A0A087S372_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Double-stranded DNA-binding domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00252</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PDCD5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20176">
        <property type="protein sequence ID" value="KFM20176"/>
        <property type="gene ID" value="AAA799P11_00252"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.246"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002836">
        <property type="entry name" value="PDCD5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036883">
        <property type="entry name" value="PDCD5-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10840">
        <property type="entry name" value="PTHR10840"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01984">
        <property type="entry name" value="dsDNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015730">
        <property type="entry name" value="TFAR19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46950">
        <property type="entry name" value="SSF46950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="93" mass="10708" checksum="86C8C650A6F37F18" modified="2014-10-29" version="1">MSFPESNDQPQDNTNHEQAAQKEQILKQILVPEARMRLNNIKMVKPELADLVEQYLIGMATQGKISGQISDDQLKQILLSTQQPKRDFKFNRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S375</accession>
    <name>A0A087S375_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nuclease-related domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20179">
        <property type="protein sequence ID" value="KFM20179"/>
        <property type="gene ID" value="AAA799P11_00255"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011528">
        <property type="entry name" value="NERD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08378">
        <property type="entry name" value="NERD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NERD" evidence="1">
        <location>
            <begin position="73"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="234" mass="27049" checksum="6A04686D3C1E2DD3" modified="2014-10-29" version="1">MAIIYGISEATKDFLKKMPKGVKSLDDIEKIHQKLTQEYDDLENKGLIAKFSRWNKKRQIKKIEDNADSKEHKGARGEVQALEKLSELPDDFHIFCGVNKGLKGYITYRRKRNLKSAQMDFVVVSKRVVAVIEVKNWSSHYYKNHYGIPPHEQVDRAGRVLWISIQSSWFSPKKPPVSSVLLSIQGNIGYNDDYGYVSVKNLNNINYFLQNKEIQFSEKEVNRLIGRIKGDITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S382</accession>
    <name>A0A087S382_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00262</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20186">
        <property type="protein sequence ID" value="KFM20186"/>
        <property type="gene ID" value="AAA799P11_00262"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="151" mass="17843" checksum="9B0CBC6B0ECFB8CF" modified="2014-10-29" version="1">MDQWSRDQVMKGLQELVPDITFLKKSEEFDGKKGGIWTSGEHDLLYNGMPPFDHSVEYGDFPRSWTGDKKHGELSVKTMYVNGVHREIFSWLEERDWYPKWYDPDTVFFWKNTGEHETDTLRDIRNHPEGDVDDISGEILKRLNAKFQSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H4</accession>
    <name>A0A087S3H4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Na antiporter NhaA 2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20278">
        <property type="protein sequence ID" value="KFM20278"/>
        <property type="gene ID" value="AAA799P11_00025"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.25"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="47"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="253" mass="28291" checksum="687B5734B1AD6155" modified="2014-10-29" version="1">MIKKSTFTSLVVVLVIAIAISAFFAGNYVSNFNSDKVTQSDLKNAFAKLEEKIGTNTQPSIQPNTQPIRVSVDDDPMKGNPNAPITIIEFSDYECPFCGKFYTDTLPLIEENYINTGKVNFVYRDFPIQSIHPNAVSTAMAAECADDQEMFWPYHDMIFENKSTWEKQRGQNLVNELAQYAVVLGLDVEEFTACLESNKHLDEIKNDLQDGQSYGISGTPGFFIGNDNSGYIKVSGAKPYQAFEEILEEMLAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L6</accession>
    <name>A0A087S3L6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tfb</name>
        <name evidence="5" type="ORF">AAA799P11_00067</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20320">
        <property type="protein sequence ID" value="KFM20320"/>
        <property type="gene ID" value="AAA799P11_00067"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CYCLIN" evidence="4">
        <location>
            <begin position="34"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="120" mass="13468" checksum="E705D200D7DC2503" modified="2014-10-29" version="1">MQKVSGVNRRNLTKYYRLLIKEFNWQIPVVDPTQCVVRIANNAGVSEKTKRTAIDILHKVKQQGFIDGKDPTSVAAAAIYIAGKKTKEVLSFKKIGSAANITELTIRNVRKRLEILVENS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M5</accession>
    <name>A0A087S3M5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Digeranylgeranylglycerophospholipid reductase 2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00076</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20329">
        <property type="protein sequence ID" value="KFM20329"/>
        <property type="gene ID" value="AAA799P11_00076"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.73"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="1">
        <location>
            <begin position="5"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="378" mass="41798" checksum="38C78121F86B4E98" modified="2014-10-29" version="1">MYFDAVVAGGSVAGLLCAREIAAKGFTVLVIEEDYEVGTPEHCGGLVSISGLEELGVVPFRKTFDHMIESAEITAPNGKSFSINSKKQKVIEISRRELDKQIAFQAQKNGAIIKVRTSFQEMTDTGIRTNEENIDCKIFVDARGVSSLIQKDRTGILSSAQYEIYANWIKKRKVEVIFDQEKYPGFFAWIIPSGEGKGKVGVAGKGINVAETIEKILEEKGEYSTIRKVFAPIWIKGPIEKFVENNIVIVGDAAGQAKPTTAGGIFTSGMGGVYAGQAIAEFLRTGDKSKLEEYQTKWTDRFGKEFEKQIFARKILERLDNNTINKLFESITPEILKDISEKDDFDFHTGSIVKLLGLKGSIKTAQTLIGGEFKKLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N2</accession>
    <name>A0A087S3N2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cyclophilin-like domain containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00083</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20336">
        <property type="protein sequence ID" value="KFM20336"/>
        <property type="gene ID" value="AAA799P11_00083"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.80"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025658">
        <property type="entry name" value="Cyclophilin_TM1367"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04126">
        <property type="entry name" value="Cyclophil_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="SSF50891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclophil_like" evidence="1">
        <location>
            <begin position="4"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="127" mass="13822" checksum="B7A68447065F9F57" modified="2014-10-29" version="1">MKHTVHVDVDSSKIILELDDSRSPKTVNEFVEKLPFTVDLNVWGDEIYSSKSPIIQPEENAKSPVELNDVAYWPTGKAICLFYGPTPIGEPGEITPASPVNIIGKVISPDKSILSVADGAKATFRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q1</accession>
    <name>A0A087S3Q1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NurA domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00102</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20355">
        <property type="protein sequence ID" value="KFM20355"/>
        <property type="gene ID" value="AAA799P11_00102"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.99"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018977">
        <property type="entry name" value="NurA_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09376">
        <property type="entry name" value="NurA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00933">
        <property type="entry name" value="NurA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NurA" evidence="1">
        <location>
            <begin position="46"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="278" mass="31006" checksum="338935008A58CF80" modified="2014-10-29" version="1">MLNTVYKDAIINRDKMLSILKGPKFEQIIQKARENWVEFTPVKEEAVTAGIDSSFNNTKFQGIELWATTAVSIKADGEVLVDLHESGLGSDTDLSRIASKMEIDACEKTVDQVDLVLMDGSLHSQFMTRQSTLDAQVVRTMKKRDNVIFIAKTSNTKKQFERLGSLAGDIFYYNQVTNNPGFSKLFVEKKYGSDKVISSTFVRLSNSTPIIKLEFLGGQHDENDIKSVMNKLYKTSIGGYPYALKLAHNNCKISDKELAKMVSLLGLSNEIGSREVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3Q3</accession>
    <name>A0A087S3Q3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA double-strand break repair protein Mre11</fullName>
            <ecNumber evidence="5">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">mre11</name>
        <name evidence="7" type="ORF">AAA799P11_00104</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="5">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="activity regulation">
        <text evidence="5">Nuclease activity is regulated by Rad50.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer. Forms a heterotetramer composed of two Mre11 subunits and two Rad50 subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the MRE11/RAD32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20357">
        <property type="protein sequence ID" value="KFM20357"/>
        <property type="gene ID" value="AAA799P11_00104"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.101"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045027">
        <property type="term" value="F:DNA end binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000403">
        <property type="term" value="F:Y-form DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006302">
        <property type="term" value="P:double-strand break repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00840">
        <property type="entry name" value="MPP_Mre11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02044">
        <property type="entry name" value="Mre11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024654">
        <property type="entry name" value="Calcineurin-like_PHP_lpxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032885">
        <property type="entry name" value="Mre11_archaea-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041796">
        <property type="entry name" value="Mre11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12850">
        <property type="entry name" value="Metallophos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4 5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos_2" evidence="6">
        <location>
            <begin position="1"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="158"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF12850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="380" mass="43324" checksum="D73F6C1DF4DA506B" modified="2014-10-29" version="1">MQFSHISDTHLGLVQYGSEERAQDVYDVFNQAIDTSIKDHVDFVIFAGDIFHVPNPNGTAIVQMANGLKRLKQNNIDSFFILGEHDISRIRTTPIPYVYHNLEFSKYIGQGKPIEYKGVLLAGFDKIRKTEISQYEEKFAEVDKITQSFSGHKILVLHQGITEFNKFAGELQSTDLPKNFTYYAMGHLHDTDIKKFNHLNGPIAYPGSIEMTTSEGIKETKKGFFEVDISGQEANPNWIELETRPQFSFKTDYQELSKTIDEISKKIAEFSKKPIVEVNIQGEKIETDYIQAQIARLNSMVLRCFWRISTKQVSDSSVFLDRPSIIDDEMYKLSVDALGSEQAANLAIKELLPVLSSGQIQEASQIIIENFEKFKKEKKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R3</accession>
    <name>A0A087S3R3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00114</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20367">
        <property type="protein sequence ID" value="KFM20367"/>
        <property type="gene ID" value="AAA799P11_00114"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.112"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="242"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="271" mass="29982" checksum="168DEE4F6C43B1E8" modified="2014-10-29" version="1">MKITLLIPLLLLLAVSPVFGQISDKTGLLTRLDVDTSGHTFEVVTVSNFEILDHEFDKEEKRLTIFIKSGLENNLGEVTIPKNLLAGNFTFYINDIETTQKSKSNERISFVTLNFTGIGNNKIDIIGTDALVGVKEIAEPIPDEKVPYEESGGGCLIATATFGSELAPQVQQLRELRDNKLLQTESGKSFINSFNPFYYSFSPQIADYQRENPIFNEIIKAGITPMITTLSLMDYAETESEILSLGISLIILNVGMYVGLPAIVILGIRRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T7</accession>
    <name>A0A087S3T7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative homocitrate synthase protein</fullName>
            <ecNumber evidence="2">2.3.3.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00138</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20391">
        <property type="protein sequence ID" value="KFM20391"/>
        <property type="gene ID" value="AAA799P11_00138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="18"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="80" mass="8725" checksum="BB8FD2F401DDCADC" modified="2014-10-29" version="1">MGICYLLLTCAGNKNIETADIIRKLPGVEEAIPVTGAYDCIVKTEMISDDVKNFVLSSIRPLDNVRSVLTLYDAPPLLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3U0</accession>
    <name>A0A087S3U0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative chromosome-partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">parB</name>
        <name evidence="2" type="ORF">AAA799P11_00141</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20394">
        <property type="protein sequence ID" value="KFM20394"/>
        <property type="gene ID" value="AAA799P11_00141"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.141"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="1">
        <location>
            <begin position="14"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="270" mass="30855" checksum="2E3CFE8F2B69B2D6" modified="2014-10-29" version="1">MVKRYKPTISYRLKEIPIKQIKIWKEAQARKLDRENISELAKSIKNEGLLNPPLVQKEGKNTFLLMSGQRRLAAMKRLGAKKIPVHVLTKQTSYDLENAKAASVVENIHRNDMNHKEIADSCKFLTEHVGKSAAARSMGMSPSTLNKYLGFAGVPDRLKALVPKEISRDEMTKLYLTIPNIKKAEKIVNRISKLETGLRKRYLRALSQSPKSSHQKLLKRAKNMRIKQNISIKLSKTNARKLASQSNKKELTPDEFAGKIISDYLKRKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQF1</accession>
    <name>A0A087RQF1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SMC domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000077">
        <property type="protein sequence ID" value="KFM15705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15705">
        <property type="protein sequence ID" value="KFM15705"/>
        <property type="gene ID" value="AAA799P11_01485"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="126"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="138"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="162" mass="18638" checksum="AD7E6D7601FB599A" modified="2014-10-29" version="1" fragment="single">KKNAIKKLDDSIQSNSERLSISEQSLASVNEHYSTLTPRIESAMNMKKQLTERIINLTSRDQSIESEVLTNESHVESLLERISIVEDNYASGEQARIANELSRINAKKAEIEKLYTTITNEYRDKSSQLTTLETQDNREKSQSNRLHDEERSXGKRRITNEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS26</accession>
    <name>A0A087RS26_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA ligase protein</fullName>
            <ecNumber evidence="3">6.5.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01451</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.1" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000060">
        <property type="protein sequence ID" value="KFM16280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16280">
        <property type="protein sequence ID" value="KFM16280"/>
        <property type="gene ID" value="AAA799P11_01451"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1366"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003910">
        <property type="term" value="F:DNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012309">
        <property type="entry name" value="DNA_ligase_ATP-dep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012310">
        <property type="entry name" value="DNA_ligase_ATP-dep_cent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016059">
        <property type="entry name" value="DNA_ligase_ATP-dep_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04679">
        <property type="entry name" value="DNA_ligase_A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01068">
        <property type="entry name" value="DNA_ligase_A_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00333">
        <property type="entry name" value="DNA_LIGASE_A2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50160">
        <property type="entry name" value="DNA_LIGASE_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_LIGASE_A3" evidence="2">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="202" mass="22707" checksum="6ADB0AFFFF0423C3" modified="2014-10-29" version="1" fragment="single">EINDFLENSINAGSEGLMLKMLDKPYQAGTRGSYWLKLKREYQNELGDSLDLVVIGGFFGKGRRTGNYGTLLLATYDEDEDIFTSICKVGTGFSDEDLDQLYQMLSPKVTIKKNPRIHSEMESDVWFEPELVIEVVASEITLSPIHKAARDKIRKGAGLALRFPKFTGKIRVEKAVEDASTNEEVISLYKGQKKVAHDKNLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS40</accession>
    <name>A0A087RS40_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase IS4 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01449</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000059">
        <property type="protein sequence ID" value="KFM16294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16294">
        <property type="protein sequence ID" value="KFM16294"/>
        <property type="gene ID" value="AAA799P11_01449"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="113"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="240" mass="28217" checksum="178738442450CFC0" modified="2014-10-29" version="1" fragment="single">MKSSRYIKMIRSMMQILKRARVPPYLHKTSNHMYTVWQHLILLTLRQYESKSYRRFTEFLKECFGICKSLGLSKVPHYTTLQKAAARLNVAMLQKILESFVIHARIKSVFAGIDATGFGHKQSSYYYTKRAKLRRKFVKLSALSDMNQQIICCIKIRHRSRHDNIDFAPLLQKANEIIPINTVVADKGYDSEKNHVVSDSLGIVSIIPPRYEDVPIYKTRGYHRKRLKRYGYDESLYHQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSF2</accession>
    <name>A0A087RSF2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF126 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01437</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000052">
        <property type="protein sequence ID" value="KFM16406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16406">
        <property type="protein sequence ID" value="KFM16406"/>
        <property type="gene ID" value="AAA799P11_01437"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1359"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002840">
        <property type="entry name" value="AcnX_swivel_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01989">
        <property type="entry name" value="DUF126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF126" evidence="1">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="82" mass="8556" checksum="C0102BEA83E40925" modified="2014-10-29" version="1" fragment="single">DTILVFPSGVGSSVGAYTIYSIKSNGTAPLAMICQKADLTVATGCALANIPLVILSDEEFSSINNGMKLSLDTDSSHSLQYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSV0</accession>
    <name>A0A087RSV0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01423</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000047">
        <property type="protein sequence ID" value="KFM16554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16554">
        <property type="protein sequence ID" value="KFM16554"/>
        <property type="gene ID" value="AAA799P11_01423"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="96" mass="11485" checksum="1B67FF5479C96D9A" modified="2014-10-29" version="1">MKNVLIDQNIKYLTNDDHKHRLENYEKIFEVGKDLKQRDYDEVLATFCKENECDLLTADNRAYVHFLAEKINTVQISELFYDEKADRPIYLVKIID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSX6</accession>
    <name>A0A087RSX6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01417</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000046">
        <property type="protein sequence ID" value="KFM16580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16580">
        <property type="protein sequence ID" value="KFM16580"/>
        <property type="gene ID" value="AAA799P11_01417"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="36" mass="3473" checksum="31783C871E3DF9DA" modified="2014-10-29" version="1" fragment="single">MKTIVLLLMAAAVISISGSTSLAYAAEDGAAGSSDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTJ2</accession>
    <name>A0A087RTJ2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA ligase ADP-forming subunit beta protein</fullName>
            <ecNumber evidence="3">6.2.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01410</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.5" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000043">
        <property type="protein sequence ID" value="KFM16796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16796">
        <property type="protein sequence ID" value="KFM16796"/>
        <property type="gene ID" value="AAA799P11_01410"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004775">
        <property type="term" value="F:succinate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013650">
        <property type="entry name" value="ATP-grasp_succ-CoA_synth-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005809">
        <property type="entry name" value="Succ_CoA_synthase_bsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11815">
        <property type="entry name" value="PTHR11815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08442">
        <property type="entry name" value="ATP-grasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="9"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="15887" checksum="BF4F73E9A1329CBD" modified="2014-10-29" version="1" fragment="single">MQLLEFQAKELFREYGINLLDSISSTNIEEGRKHAKELGYPFVIKIQVPVGGRGKAGGIQKCHNDDEFEIKYPQVMDLTIKGEKARAILLEKMADIKKELYLSIFLNRSKRCYTIIASAEGGVEIESVKNQIIKEIGLGEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RU40</accession>
    <name>A0A087RU40_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative phosphoglucosamine mutase protein</fullName>
            <ecNumber evidence="3">5.4.2.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01391</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.8" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000039">
        <property type="protein sequence ID" value="KFM16994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16994">
        <property type="protein sequence ID" value="KFM16994"/>
        <property type="gene ID" value="AAA799P11_01391"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1321"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004615">
        <property type="term" value="F:phosphomannomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005843">
        <property type="entry name" value="A-D-PHexomutase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00408">
        <property type="entry name" value="PGM_PMM_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="SSF55957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_III" evidence="2">
        <location>
            <begin position="2"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_IV" evidence="1">
        <location>
            <begin position="141"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="196" mass="21495" checksum="09AC05C3F7B2EA8A" modified="2014-10-29" version="1">MTGDKSALLLTKHILANNPNSLVVTCLNSGSNIEVLAEQFDSKVIRTKVGSVEVSRKMVPTDALIGFEENGGFMFGKHNQVRDGCMTLALMLDLLAASSNPLSYEISNLPPSFTTKDKVSCSPENVPKLISSLKAEFPNSDTSDGIKINIDSRNWVMIRPSGTEPIVRVYAEAQSQEKLDDLMSEYLQKVKTIISR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RU41</accession>
    <name>A0A087RU41_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">50S ribosomal protein L7Ae</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Ribosomal protein L8e</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rpl7ae</name>
        <name evidence="10" type="ORF">AAA799P11_01392</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 50S ribosomal subunit. Probably part of the RNase P complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the eukaryotic ribosomal protein eL8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000039">
        <property type="protein sequence ID" value="KFM16995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="A0A087RU41"/>
    <dbReference type="EnsemblBacteria" id="KFM16995">
        <property type="protein sequence ID" value="KFM16995"/>
        <property type="gene ID" value="AAA799P11_01392"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1322"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001682">
        <property type="term" value="P:tRNA 5'-leader removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00326">
        <property type="entry name" value="Ribosomal_L7Ae_Arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004038">
        <property type="entry name" value="Ribosomal_L7Ae/L30e/S12e/Gad45"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018492">
        <property type="entry name" value="Ribosomal_L7Ae/L8/Nhp2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022481">
        <property type="entry name" value="Ribosomal_L7Ae_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000948">
        <property type="entry name" value="Ribosomal_L7Ae_prok"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01248">
        <property type="entry name" value="Ribosomal_L7Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00881">
        <property type="entry name" value="L7ARS6FAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00884">
        <property type="entry name" value="RIBOSOMALHS6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03677">
        <property type="entry name" value="eL8_ribo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 8 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 8" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Ribosomal_L7Ae" evidence="9">
        <location>
            <begin position="19"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM16995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="128" mass="13444" checksum="5A0D0EF55E6545EF" modified="2014-10-29" version="1">MGKAYYVKFETPEDLVNPILEAVRVASTSGKVKKGTNEATKAIERGTSKLIVIAEDVEPPEVVAHLPILCEEQGAAFAFVPSKQELGKSLGIDITSAAAAILDAGDAQHIVDQVVSSIAKIKGGKTDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUU3</accession>
    <name>A0A087RUU3_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Aspartate carbamoyltransferase</fullName>
            <ecNumber evidence="3">2.1.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pyrB</name>
        <name evidence="9" type="ORF">AAA799P11_01365</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>carbamoyl phosphate + L-aspartate = H(+) + N-carbamoyl-L-aspartate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20013"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:32814"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="EC" id="2.1.3.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the aspartate/ornithine carbamoyltransferase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.2" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17247">
        <property type="protein sequence ID" value="KFM17247"/>
        <property type="gene ID" value="AAA799P11_01365"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1300"/>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004070">
        <property type="term" value="F:aspartate carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006130">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036901">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002082">
        <property type="entry name" value="Asp_carbamoyltransf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006131">
        <property type="entry name" value="Asp_carbamoyltransf_Asp/Orn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11405:SF16">
        <property type="entry name" value="PTHR11405:SF16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00185">
        <property type="entry name" value="OTCace"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00100">
        <property type="entry name" value="AOTCASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53671">
        <property type="entry name" value="SSF53671"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="OTCace" evidence="8">
        <location>
            <begin position="3"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM17247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="137" mass="15988" checksum="1B845443455AEABC" modified="2014-10-29" version="1">MLYGLGNYDVDVRLISPESLRIRSDSTYEIKQRLDYTESTNIEEHIDELDVLYVTRIQKERFPDEEEYLKVKGSYIVGLDLLKQMKEDSIILHPLPRIDEISTDIDKTKNAKYFEQAEYGKHTRAALLGLTLNENGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVF5</accession>
    <name>A0A087RVF5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase</fullName>
            <shortName evidence="5">HPPK</shortName>
            <ecNumber evidence="5">2.7.6.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">6-hydroxymethyl-7,8-dihydropterin diphosphokinase</fullName>
            <shortName evidence="5">6-HMPDK</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">7,8-dihydro-6-hydroxymethylpterin diphosphokinase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase</fullName>
            <shortName evidence="5">PPPK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">mptE</name>
        <name evidence="7" type="ORF">AAA799P11_01340</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the transfer of diphosphate from ATP to 6-hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>6-hydroxymethyl-7,8-dihydropterin + ATP = (7,8-dihydropterin-6-yl)methyl diphosphate + AMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11412"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:44841"/>
            <dbReference type="ChEBI" id="CHEBI:72950"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.6.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the archaeal 6-HMPDK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.6.3" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000032">
        <property type="protein sequence ID" value="KFM17459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17459">
        <property type="protein sequence ID" value="KFM17459"/>
        <property type="gene ID" value="AAA799P11_01340"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1280"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003848">
        <property type="term" value="F:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004788">
        <property type="term" value="F:thiamine diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02131">
        <property type="entry name" value="HMPDK_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027510">
        <property type="entry name" value="HMPDK_MptE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002826">
        <property type="entry name" value="MptE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036759">
        <property type="entry name" value="TPK_catalytic_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39648">
        <property type="entry name" value="PTHR39648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01973">
        <property type="entry name" value="MAF_flag10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63999">
        <property type="entry name" value="SSF63999"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MAF_flag10" evidence="6">
        <location>
            <begin position="33"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="244" mass="27344" checksum="36DF4FE273F12629" modified="2014-10-29" version="1">MMISGWKTKYSEILKEFGYDEKKDKESATILNTILKKSKTEEKIRKLVQGKTVFVIGSGPSLSSAIPKLKKLKKGIKIAADSSLKVLLENGIIPDIVVTDLDGDERSLKKIAKKAIFVIHAHGDNIEKLELAKKFKNCIGTTQTKPFKKIQNFGGFTDGDRGVFLANHFEAKKIILFGMDFGSRIGKFSNTKKSERKIKLKKLKKGKSLLEWLATKSKSELFTTSSKIEGFEKLPYKSLDIIIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVF6</accession>
    <name>A0A087RVF6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative modulator of DNA gyrase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01341</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000032">
        <property type="protein sequence ID" value="KFM17460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17460">
        <property type="protein sequence ID" value="KFM17460"/>
        <property type="gene ID" value="AAA799P11_01341"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1282"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="190" mass="21665" checksum="4C13A4DB3E9C0F47" modified="2014-10-29" version="1">MKFSEEQMKGIVTLKESLIEQVDKHHEAIETLEKNITILDLFLKESSFTKASQLATTEKIDPQKIKESVKEVQKSIPITQGKDGKVIANAFVTPEQVSIVLDDNVEISADTPPFKSFFLDRIIGEMKKKDSADVENGKIQRESIIDYIINKNGSDIREIIIKNYRQKERVNELINTAGWSLSRMLENINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVP0</accession>
    <name>A0A087RVP0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01304</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000029">
        <property type="protein sequence ID" value="KFM17544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17544">
        <property type="protein sequence ID" value="KFM17544"/>
        <property type="gene ID" value="AAA799P11_01304"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1244"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="376" mass="42026" checksum="6901138D7CF82C59" modified="2014-10-29" version="1" fragment="single">VSVAQEQNFVIQTANAEEIPVIVKTYYDDVDNFKFDQSDNSISFDMPFDWSPDYVDLVQVVHEEVRVPKTFSPYAEGKQFKGYVNGVEIDQRALLNDPYSYDDTNIVHFLITNQELKKINETLGESNYDNKKMDLKLVPLSEVEKQSTEFYLVDTTNYEPVPTTVNISGDGSYGAGDEIPFEIAFFDENRELIRDMKYVVSFIDENDNILETFMGDDPQMPGIVATEGIDIRKILVPSQGVYRIDVRALGTGFAYEETYAGIGSGIIEIGPSTGKTTPTPEVAPPAAIPSWIKNNAEWWADGQIDDDSFVQGIQYLVKEGILKIPPTSQGEGTGSNEIPAWIKNNAGWWAEGAIDDDSFIQGIQFLIKEGIMKVQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVP4</accession>
    <name>A0A087RVP4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01308</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000029">
        <property type="protein sequence ID" value="KFM17548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17548">
        <property type="protein sequence ID" value="KFM17548"/>
        <property type="gene ID" value="AAA799P11_01308"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1248"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="69"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="166" mass="19205" checksum="16EF15F1E388B733" modified="2014-10-29" version="1">MTDRDSQIQRIIERNPGIQFREIMRSSGLKNGVLSHYLDKLEKNGIIKANRGPRQVRFYPPQITEDESIVIKALRKQTPHDLLLALIKEDGLEFSQLVKEVNKSPSTVSLYLSQLVNDGLVEIKYVQLKKRYHIKARDLIDKLIEDYRPSLLEKPTSGFEDIINSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW0</accession>
    <name>A0A087RWW0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Zinc-ribbon domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01277</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17964">
        <property type="protein sequence ID" value="KFM17964"/>
        <property type="gene ID" value="AAA799P11_01277"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1220"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1060.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038587">
        <property type="entry name" value="L40e_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026870">
        <property type="entry name" value="Zinc_ribbon_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13240">
        <property type="entry name" value="zinc_ribbon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="zinc_ribbon_2" evidence="2">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM17964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="92" mass="8951" checksum="662669D03C3791A5" modified="2014-10-29" version="1">MSGMGQPGMMAGGMPGGAPPPRAGTAQNPVGGGPPGIVSAQEAFNDVGTLPSPDPALMPRQTAPQNNGNGCSSCGAELRPNAKFCTKCGAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWW5</accession>
    <name>A0A087RWW5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein-L-isoaspartate O-methyltransferase</fullName>
            <ecNumber evidence="4">2.1.1.77</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">L-isoaspartyl protein carboxyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Protein L-isoaspartyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Protein-beta-aspartate methyltransferase</fullName>
            <shortName evidence="4">PIMT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pcm2</name>
        <name evidence="4" type="synonym">pcm</name>
        <name evidence="5" type="ORF">AAA799P11_01282</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 4">Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>[protein]-L-isoaspartate + S-adenosyl-L-methionine = [protein]-L-isoaspartate alpha-methyl ester + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:12705"/>
            <dbReference type="Rhea" id="RHEA-COMP:12143"/>
            <dbReference type="Rhea" id="RHEA-COMP:12144"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90596"/>
            <dbReference type="ChEBI" id="CHEBI:90598"/>
            <dbReference type="EC" id="2.1.1.77"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.77" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17969">
        <property type="protein sequence ID" value="KFM17969"/>
        <property type="gene ID" value="AAA799P11_01282"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1225"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004719">
        <property type="term" value="F:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00090">
        <property type="entry name" value="PIMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000682">
        <property type="entry name" value="PCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579">
        <property type="entry name" value="PTHR11579"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00080">
        <property type="entry name" value="pimt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 5" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="4">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00025330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM17969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="221" mass="24704" checksum="A4A2CA02CBE2EF29" modified="2014-10-29" version="1">MKKIQIEKRYHDALNNLICNLKDSGFLTDKKIESAFWNIPRHEFVPTSEKKFAYFNEPLPIKNNQTISQPAVVSRMTEWLDVHDGQKILEIGTGSGWQTAILSYLVGTGTVYSIDIHPELINFARKNLEKLGIDNAHIILGDGSLGHSQESPYDRIIITAACTEIPLPLFEQLNDDGLLIAPVGDSSQSLVLLKKTSKGIIEIKNQSNYVFVPLLGKFGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI2</accession>
    <name>A0A087RXI2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Vitamin B12-dependent ribonucleotide reductase</fullName>
            <ecNumber evidence="13">1.17.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">nrdJ</name>
        <name evidence="15" type="ORF">AAA799P11_01217</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>[thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-diphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-diphosphate</text>
            <dbReference type="Rhea" id="RHEA:23252"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="EC" id="1.17.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 13">
            <name>adenosylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Genetic information processing; DNA replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the ribonucleoside diphosphate reductase class-2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.4.1" evidence="13"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18186">
        <property type="protein sequence ID" value="KFM18186"/>
        <property type="gene ID" value="AAA799P11_01217"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1170"/>
    <dbReference type="UniPathway" id="UPA00326"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004748">
        <property type="term" value="F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071897">
        <property type="term" value="P:DNA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd02888">
        <property type="entry name" value="RNR_II_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005144">
        <property type="entry name" value="ATP-cone_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013509">
        <property type="entry name" value="RNR_lsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013344">
        <property type="entry name" value="RNR_NrdJ/NrdZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008926">
        <property type="entry name" value="RNR_R1-su_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03477">
        <property type="entry name" value="ATP-cone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00317">
        <property type="entry name" value="Ribonuc_red_lgN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01183">
        <property type="entry name" value="RIBORDTASEM1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48168">
        <property type="entry name" value="SSF48168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02504">
        <property type="entry name" value="NrdJ_Z"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51161">
        <property type="entry name" value="ATP_CONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 13" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="11 13" id="KW-0170">Cobalt</keyword>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-0235">DNA replication</keyword>
    <keyword evidence="13" id="KW-0237">DNA synthesis</keyword>
    <keyword evidence="7 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 13 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-cone" evidence="14">
        <location>
            <begin position="11"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU364064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="KFM18186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="883" mass="99250" checksum="07C733E7F603E24A" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL8</accession>
    <name>A0A087RXL8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative RNA methyltransferase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01139</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18222">
        <property type="protein sequence ID" value="KFM18222"/>
        <property type="gene ID" value="AAA799P11_01139"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1101"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18086">
        <property type="entry name" value="HsC9orf114-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003750">
        <property type="entry name" value="Put_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12150">
        <property type="entry name" value="PTHR12150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02598">
        <property type="entry name" value="Methyltrn_RNA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="270" mass="30251" checksum="65A088137BA8E87D" modified="2014-10-29" version="1">MKLSVAIPESALSDESLKIDKTRKISVLARACAIFKIETIYVYQEGNNKQDGNLMVMILKYLETPQFLRRRLFSKVNDLKFAGVLQPLRIPSHVTPANPKKISKGDVREGIVVSVKGKRFVDVGINQLIPFFGKTPIGKRVTVQFKEGYPNFSIKEITRSEAPEYWGYGVKERANLFSLLSEWKGNIILTSRKGKTATKEQITKYTKSDQPTLVVFGSPEKGIHEILGGKMKNVQNAKSLNFFPNQATQTVRLEEALLGTLSIINAQSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXY9</accession>
    <name>A0A087RXY9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01118</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18343">
        <property type="protein sequence ID" value="KFM18343"/>
        <property type="gene ID" value="AAA799P11_01118"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="49" mass="5771" checksum="27D7F7B2E12D7FAE" modified="2014-10-29" version="1">MGEYSYLASLKNKEFLILQKLCNNSIPQNQKEKLQKDLEETRNEIEKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ3</accession>
    <name>A0A087RXZ3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Type-1 restriction enzyme EcoBI specificity protein</fullName>
            <ecNumber evidence="5">1.1.1.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hsdS</name>
        <name evidence="5" type="ORF">AAA799P11_01122</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type-I restriction system S methylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.22" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18347">
        <property type="protein sequence ID" value="KFM18347"/>
        <property type="gene ID" value="AAA799P11_01122"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1085"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003979">
        <property type="term" value="F:UDP-glucose 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.220.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000055">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044946">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01420">
        <property type="entry name" value="Methylase_S"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0680">Restriction system</keyword>
    <feature type="domain" description="Methylase_S" evidence="4">
        <location>
            <begin position="19"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="Methylase_S" evidence="4">
        <location>
            <begin position="273"/>
            <end position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="465" mass="53495" checksum="F35B4B70378C856D" modified="2014-10-29" version="1">MEKNESLPKGWINTTFEKCVEILDGKRIPINSKERQQRQGKIPYYGATGQVGWIDDYLFDEQLVLLGEDGVPFFNNFKNKAYLISGKSWVNNHAHVLKGISNLLLNDFLCYYLNQIDYHNYVNGTTRLKLNQTSMKKIPIILPPLNEQKRIVEKIEMFYSIIDSFYSTILENKMKLELYQKSFLISILEGKMIEYEKTDLENNTLEKITQSRFLLFEKEIKKNPKKKIQKPPQPIEITENKFYDCPTDWQWTTLNSIIDPYRGITYGVIKLGQDIENGIPCLRTSDVKSLKIETHGVKKISKNIADEYKRTYLRGGEVLVNVRGTLGGVCSVPNTLKDYNISREVAMVPVLSIIPSDWVSYWISSVASQNWLTGATKGIAYRGINLEDLRNLPICIPPLKLIPKLISKIEYNFSIIKQFGIYLDLDKSVAKMRSKILQFAFEGKLVPQDPNDEPASELLKKITLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXZ5</accession>
    <name>A0A087RXZ5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Type-1 restriction enzyme EcoAI specificity protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_01124</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type-I restriction system S methylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18349">
        <property type="protein sequence ID" value="KFM18349"/>
        <property type="gene ID" value="AAA799P11_01124"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1087"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.220.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000055">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044946">
        <property type="entry name" value="Restrct_endonuc_typeI_TRD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01420">
        <property type="entry name" value="Methylase_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0680">Restriction system</keyword>
    <feature type="domain" description="Methylase_S" evidence="5">
        <location>
            <begin position="4"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="130"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM18349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="158" mass="18235" checksum="78A5E5E6728187F7" modified="2014-10-29" version="1">MVAIIPDNFEEAYVNQHVSLVRVDSRLNPKFIAWFLSSFDGGQQQFKNLQRGVIKTGLGLNDIRSIWIPFPSLEEQKIIVEKIEECVSVISQKKSQLDSLLMQLDILKSVILKYAFEGKLVPQDPNDEPVEILLQKIKQEKEQLKQKQKTSRRSKNVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY30</accession>
    <name>A0A087RY30_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01097</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18384">
        <property type="protein sequence ID" value="KFM18384"/>
        <property type="gene ID" value="AAA799P11_01097"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1058"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="232"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="14"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="252" mass="29319" checksum="CF1C208D245DAB84" modified="2014-10-29" version="1">MGLFGKKEDTVSENSDEYVLKEELETEVEGLQNEFREKQEELNGIQKKIDSVKEEYETAVSNLMLVKKELNQKRMELDIVIREHKEIKEKIKNSEQIKDSKSFEEFGKTEENLSKIKQELEEITKEYEDIKEKIATEQSALSQIRKQQVEAKKELDEANSRLYNAKEELNKKDEFQDTNILTPKEREFIQGDNKSSAGVIEAASAVVGSLKSKLSMTQKELEAIQLLLEKEREEHEETKKELNKLKSKDQES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY35</accession>
    <name>A0A087RY35_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01102</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18389">
        <property type="protein sequence ID" value="KFM18389"/>
        <property type="gene ID" value="AAA799P11_01102"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1063"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="57" mass="6412" checksum="BA13FA77164B7CC0" modified="2014-10-29" version="1">MVGPRDGGFGFDQSKKYTNVDNLDEICVQCQAGQHKNCLKKAKKQDVCECEHCMIYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY39</accession>
    <name>A0A087RY39_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01106</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18393">
        <property type="protein sequence ID" value="KFM18393"/>
        <property type="gene ID" value="AAA799P11_01106"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1067"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004089">
        <property type="term" value="F:carbonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036874">
        <property type="entry name" value="Carbonic_anhydrase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53056">
        <property type="entry name" value="SSF53056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="13448" checksum="495B7B56092DE9DD" modified="2014-10-29" version="1">MAEGKFATSVTCMDGRIQLPLAKWIKENYSVDYVDAITEPGVDKKVADNSDLESIKTKVGISINAHKSELIVVSGHYDCAGNPVSDEEHKSQIKKGVEVISSWNTGAKVIGVWVDDTWNINVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYE3</accession>
    <name>A0A087RYE3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01067</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18497">
        <property type="protein sequence ID" value="KFM18497"/>
        <property type="gene ID" value="AAA799P11_01067"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1029"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="121" mass="13952" checksum="5906F30E92329852" modified="2014-10-29" version="1">MKNLEYEKICDDILECDKKIRYVGVYDYGELHDKMPPGVESFLSREETELSLSQAVYRWSTRKKTSEKIGKPIFALAKYERIYRVTIPIGGAGLILISTELDANVNEIVDKVLEIKNKYSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF2</accession>
    <name>A0A087RYF2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 12">Probable cobalamin biosynthesis protein CobD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 13" type="primary">cobD</name>
        <name evidence="13" type="ORF">AAA799P11_01076</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 12">Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 12">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 12">Cell membrane</location>
            <topology evidence="3 12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 12">Belongs to the CobD/CbiB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18506">
        <property type="protein sequence ID" value="KFM18506"/>
        <property type="gene ID" value="AAA799P11_01076"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1038"/>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015420">
        <property type="term" value="F:ABC-type vitamin B12 transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048472">
        <property type="term" value="F:threonine-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00024">
        <property type="entry name" value="CobD_CbiB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004485">
        <property type="entry name" value="Cobalamin_biosynth_CobD/CbiB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34308">
        <property type="entry name" value="PTHR34308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03186">
        <property type="entry name" value="CobD_Cbib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00380">
        <property type="entry name" value="cobD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 12" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="13" id="KW-0436">Ligase</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="84"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="166"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="300"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00016185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM18506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="323" mass="35230" checksum="D17B76BA52DA90A6" modified="2014-10-29" version="1">MILESLIIVGFALVLDFAFGDPKNRYHPTAWIGGLIAKLTPLGQNQNQKLERVGGIFVVTIPVGIAVALLLILDYGISLLSTDWITLIVSVVVGALLLKTTIAIKGMEHYAIAVVESLEMDNLDSARENLSMIVKRNTSDLDKNHVISGVLESVSENTVDGITGPLFYYAIFGISGAFVYRVINTADSMIGYKNNIFKNLGWFAATCDTVLNYIPSRLTGLVMILSAALLQNNWKESYQIMIRDGKKTESPNAGYPMAALAGALGTKFEKVNHYKLGSGELTLTKEHVHAAISIMKLTSVLFFGIVTIPIITVLSLIGWWIHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYF7</accession>
    <name>A0A087RYF7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Protoheme IX farnesyltransferase</fullName>
            <ecNumber evidence="10">2.5.1.141</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Heme B farnesyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Heme O synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ctaB2</name>
        <name evidence="10" type="synonym">ctaB</name>
        <name evidence="11" type="ORF">AAA799P11_01081</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(2E,6E)-farnesyl diphosphate + H2O + heme b = diphosphate + Fe(II)-heme o</text>
            <dbReference type="Rhea" id="RHEA:28070"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="ChEBI" id="CHEBI:60530"/>
            <dbReference type="ChEBI" id="CHEBI:175763"/>
            <dbReference type="EC" id="2.5.1.141"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 10">Porphyrin-containing compound metabolism; heme O biosynthesis; heme O from protoheme: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 10">Cell membrane</location>
            <topology evidence="3 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="10">Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">In the C-terminal section; belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.141" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18511">
        <property type="protein sequence ID" value="KFM18511"/>
        <property type="gene ID" value="AAA799P11_01081"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1043"/>
    <dbReference type="UniPathway" id="UPA00834">
        <property type="reaction ID" value="UER00712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008495">
        <property type="term" value="F:protoheme IX farnesyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048034">
        <property type="term" value="P:heme O biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13957">
        <property type="entry name" value="PT_UbiA_Cox10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00154">
        <property type="entry name" value="CyoE_CtaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006369">
        <property type="entry name" value="Protohaem_IX_farnesylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43448">
        <property type="entry name" value="PTHR43448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01473">
        <property type="entry name" value="cyoE_ctaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="124"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="154"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="178"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="224"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="285"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM18511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="309" mass="33779" checksum="7E668440824AE286" modified="2014-10-29" version="1">MQKQKTESRVAVYYELTKPKIWYLLVFTAFGAALTASNIYGIEIAPSTWALMLFSVAAGSAAANTLTNYHDRDIDAIMERTKGRPLPSKRIYPAVKARNFGLVLAGISLVLAFGISFTTTLEQGLWATAFIAFGLLNNILVYSYALKRNSRTNIILGGLCGGSPPMIGWVAVTMSDLWTMGLAMAGLVFIWIPMHIWALTLHFKDDYNKVNVPMLTAVQSEKTSARAIAGSTVVMVLFSIAPFFITTQSGEEMVGGVYLWTAIASGALMVALSIWVIVKPMEKASWTLFKFSSPYLAVLFIALMVDSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYG2</accession>
    <name>A0A087RYG2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01086</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18516">
        <property type="protein sequence ID" value="KFM18516"/>
        <property type="gene ID" value="AAA799P11_01086"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1048"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="127" mass="14422" checksum="E1CD8930024C2D79" modified="2014-10-29" version="1">MEISVEPWKKLVIHEVIEYKFDDWVKQIAFSTRSSGGAIPTMQWTNGIVFSPANFPTTNVTVEEQLKGILHWSSVSFAIKEKFEKQIVKENATINLVDVSVNEIFKELAISLKAQSKFTNSESDNDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ30</accession>
    <name>A0A087RZ30_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Replication factor C small subunit</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Clamp loader small subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rfcS</name>
        <name evidence="7" type="ORF">AAA799P11_01029</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the activator 1 small subunits family. RfcS subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18734">
        <property type="protein sequence ID" value="KFM18734"/>
        <property type="gene ID" value="AAA799P11_01029"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.990"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013748">
        <property type="entry name" value="Rep_factorC_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08542">
        <property type="entry name" value="Rep_fac_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="38"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM18734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="316" mass="35072" checksum="8A77F5345B0706FA" modified="2014-10-29" version="1">MAATGMWVEKYRPMKLSEVVNQTEIIGSLEALIKDPTDMPHLLFSGSAGVGKTTTALCISRQILGDYAKDYTLELNASDERGIGMVREKVKKFSRYAGMADVPFKIIILDEADEMTSDAQTALRRIIEDTAKICRFILIANNISKIIDPIQSRCATFKFTSVPEEDVIKRLEDIAKKEKVKADKKGLKAIYDYSEGDLRHAINLMQATASLGAISEENVKASAGLTKTTDVDEVLKIALSGKVPEAREKMIELIKVYGMSESDFLKYLNSAVFKSKHDKLSDILEIIAKYDYRILVGSNSEIQLSAMLAELAKVEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ48</accession>
    <name>A0A087RZ48_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">5' nucleotidasedeoxy protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00956</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18752">
        <property type="protein sequence ID" value="KFM18752"/>
        <property type="gene ID" value="AAA799P11_00956"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.925"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="72" mass="8368" checksum="5A5CA7959E71CE97" modified="2014-10-29" version="1" fragment="single">NISYDNYVSVIDGPMKADLDYDVFIDDSPLNAFKFLKNKKNVILYSQPWNQHIVEKNVHRISNLSEAIIKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ56</accession>
    <name>A0A087RZ56_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PP-loop domain containing protein</fullName>
            <ecNumber evidence="3">6.3.4.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00969</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.19" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18760">
        <property type="protein sequence ID" value="KFM18760"/>
        <property type="gene ID" value="AAA799P11_00969"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.933"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034227">
        <property type="term" value="P:tRNA thio-modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002098">
        <property type="term" value="P:tRNA wobble uridine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000541">
        <property type="entry name" value="Ncs6/Tuc1/Ctu1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011063">
        <property type="entry name" value="TilS/TtcA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035107">
        <property type="entry name" value="tRNA_thiolation_TtcA_Ctu1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01171">
        <property type="entry name" value="ATP_bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004976">
        <property type="entry name" value="ATPase_YdaO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00269">
        <property type="entry name" value="TIGR00269"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ATP_bind_3" evidence="2">
        <location>
            <begin position="50"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="304" mass="34235" checksum="CF0CA90C1151BA1C" modified="2014-10-29" version="1">MKCDGCENSAVYTRKYSGQKLCSDCFSNSIVRKTAKTISKHKMIKNNELVAVAVSGGKDSLALLKIIHEMSSSHNFRIKAITIDEGIPGYRNEALEIVEKFCEELGVEHKVYSYKDLFELTLDEALDLRENEKTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTFVINMLSGDTNKIGWMDPDTSLNSLRKIKPFCEIYESEIVFYAFTNDIPFQSEPCPHMNEGIRTEIREFLNSLEKQHSGIKNNLYKSILRVSNIVKETNYKEKTICKKCGSDCTGNVCSVCNMVLKLKENQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ61</accession>
    <name>A0A087RZ61_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00974</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18765">
        <property type="protein sequence ID" value="KFM18765"/>
        <property type="gene ID" value="AAA799P11_00974"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="37" mass="4283" checksum="B824A018101664EF" modified="2014-10-29" version="1">MKNDGTQWKLEEMEVTSHEEDELDNDADESNEASLQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ69</accession>
    <name>A0A087RZ69_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein pelota homolog</fullName>
            <ecNumber evidence="9">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">pelA</name>
        <name evidence="11" type="ORF">AAA799P11_00982</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">The N-terminal domain has the RNA-binding Sm fold. It harbors the endoribonuclease activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the eukaryotic release factor 1 family. Pelota subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="9"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18773">
        <property type="protein sequence ID" value="KFM18773"/>
        <property type="gene ID" value="AAA799P11_00982"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.948"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070966">
        <property type="term" value="P:nuclear-transcribed mRNA catabolic process, no-go decay"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070481">
        <property type="term" value="P:nuclear-transcribed mRNA catabolic process, non-stop decay"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071025">
        <property type="term" value="P:RNA surveillance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.870">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01853">
        <property type="entry name" value="PelO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042226">
        <property type="entry name" value="eFR1_2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005140">
        <property type="entry name" value="eRF1_1_Pelota"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005142">
        <property type="entry name" value="eRF1_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038069">
        <property type="entry name" value="Pelota/DOM34_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023521">
        <property type="entry name" value="Pelota_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004405">
        <property type="entry name" value="Transl-rel_pelota"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10853">
        <property type="entry name" value="PTHR10853"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03463">
        <property type="entry name" value="eRF1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03465">
        <property type="entry name" value="eRF1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01194">
        <property type="entry name" value="eRF1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159065">
        <property type="entry name" value="SSF159065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00111">
        <property type="entry name" value="pelota"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="8 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0540">Nuclease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="eRF1_1" evidence="10">
        <location>
            <begin position="3"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="KFM18773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="349" mass="39042" checksum="970380719DC1C922" modified="2014-10-29" version="1">MITKNIDENLISVIPEDSDDLLNLRRIIKENDKVIGDTTRVLKQDKDYSRPDKGERIKVRIALTVEKISLDDVLDRLRIGGTISESSNESVPHGSHHSFILKINDGITISKKKWLPFEKNLLESSNNQVGFVLVAIDTGDSGIARLRGTHLEFMPNIYSGSGGKRYKTNFNIEKFFEQVQQAVSTILKEGDKIVIFGPGETKKRFANFIQKSQNFQKFKVQVVEGIDSGGEDGIYTFTKSNTMKEIMSDSKLARVSSIIDEVMLLANKKSKKFTMGFDETFNANQMGAVESLVFSDKAIQDDEQKMIDFLNDVESKGVKMYSVDSSTDIGLRVTGLGGIVSLLRYSIES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ77</accession>
    <name>A0A087RZ77_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycoprotein 3-alpha-L-fucosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.214</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.214" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18781">
        <property type="protein sequence ID" value="KFM18781"/>
        <property type="gene ID" value="AAA799P11_00990"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018392">
        <property type="term" value="F:glycoprotein 3-alpha-L-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="53"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="176" mass="20062" checksum="4BC752F82C2BF7A9" modified="2014-10-29" version="1">MNLDFDYIYGPIDIEKFKKVPENITKNEKQVVYIGRDSYEKGIDILKKIEDKINGKVVYCTNVDWELAMQVLKSSDIVVVPSRIDNIPNVIKEAFFLKIPVVATDIEGISEIVTNGVNGILVPSEEPDRLANAINQLLENKEKMKEITENGYDFVMKNLTWEALLPKQNTLNSTRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZA6</accession>
    <name>A0A087RZA6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00931</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18810">
        <property type="protein sequence ID" value="KFM18810"/>
        <property type="gene ID" value="AAA799P11_00931"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.894"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="149" mass="17395" checksum="C9BE9C93E3CABF8E" modified="2014-10-29" version="1">MKKFSEFRVGDTFHSTCSISEKELEEYLNFSRVRNAFLEDKQSGEQIVSGRAILSRMEGEFTRLSQIYGNHIIFLGTDGDPEWKNRNTRFLKPLYTDQVLKLKFTISQVEDMDDEFGKIAVDYEGTDNEGEPIVLSKRNIYRIKKEPPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZA9</accession>
    <name>A0A087RZA9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Outer membrane porin F protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">oprF</name>
        <name evidence="3" type="ORF">AAA799P11_00934</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18813">
        <property type="protein sequence ID" value="KFM18813"/>
        <property type="gene ID" value="AAA799P11_00934"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028974">
        <property type="entry name" value="TSP_type-3_rpt"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103647">
        <property type="entry name" value="SSF103647"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="220"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="254"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="291" mass="30155" checksum="3584833CB491E4D0" modified="2014-10-29" version="1">MIIFNTDFNVKIFDMREGIMFSLIVGSLILGGIGFTQQSFATPVFVGPTPYLSTADIPVGFYADGSPTFLEDFEDGTLDGGIIASDGVLTSSIAPAFVDSVDADDGVIDGSGSAGQSWFGGFASDFSVTFTFPVSVVEAGVVLTDGTPGGTVSFEAFGPGMVSLGTISTVFGDGTFFGTTAEDRFFGVKDPSGIIAIKITGHELGITEVDHVQYGNPVIPPATDSDGDGVIDENDLCPETPPGAEVDADGCEIDSPPTDEKKSCESLEKAESKGKGKHKGIPKAKDNNNCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZB6</accession>
    <name>A0A087RZB6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Two-component system OmpR family phosphate regulon sensor histidine kinase PhoR protein</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00941</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18820">
        <property type="protein sequence ID" value="KFM18820"/>
        <property type="gene ID" value="AAA799P11_00941"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HisKA" evidence="1">
        <location>
            <begin position="50"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="138" mass="16479" checksum="2480BAF872BB7D6D" modified="2014-10-29" version="1">MAKTLAKLSVRYNMTNNEEYDFKIREIKQEKILLLRILKIIRKQDVLSQEILDSLSHELRTPIVTIKAYTDMLIDGKFGDLKPTQKEKLRNIKINRVTAGGAFFNFGKKERFERKPYLISQWESRNHFKILKLFERFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZC5</accession>
    <name>A0A087RZC5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative homocitrate synthase</fullName>
            <ecNumber evidence="1">2.3.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.14" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000013">
        <property type="protein sequence ID" value="KFM18829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18829">
        <property type="protein sequence ID" value="KFM18829"/>
        <property type="gene ID" value="AAA799P11_00950"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004410">
        <property type="term" value="F:homocitrate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="85" mass="9382" checksum="BCB2D04A032973F8" modified="2014-10-29" version="1">MISYMLLNCNPGTESEVISEISSISGVAEMNGILGKYDVFVKISAYTPDEIELIVSQIRRVRAENCYTFPVVYGQGGTVDNEIQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH0</accession>
    <name>A0A087RZH0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-glucose 4-epimerase protein</fullName>
            <ecNumber evidence="3">1.2.4.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.2" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18874">
        <property type="protein sequence ID" value="KFM18874"/>
        <property type="gene ID" value="AAA799P11_00905"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.867"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004591">
        <property type="term" value="F:oxoglutarate dehydrogenase (succinyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="333"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="357"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="386"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="424"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="2">
        <location>
            <begin position="22"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="459" mass="51704" checksum="DFC18865BB85404F" modified="2014-10-29" version="1">MEQMVSQSDISHPKPFSILVTGATGFIGSKLISFLTSSGYTVKGLSRKQLPGNDKVKYVKADVFNFDELKNAMSGIETAFYLLHSMEGDKGDWQEFAAREKIQAQNFLRAATESGVKRIIYLGGLVNDSLDLSPHMRSRKEVGEILASGNIPVTEFRASIIIGAKGGSYAMLRYLVERLRVMVCPSWVKSLAQPIAADDVVEYLAKSLSKPETMGKIFEIGGPDKMTYEELMRVYSAYLNKNLFVIQIPFLTTRLSSYWVDLITPVKASLARPLIDSLVHDTVVTDDSITKIIPIHLKSVREAIDIATKEMKSDPPQMERREEKTGFKINQKLIQISLFALAVIGSSYYWLDDRPDVYQPLWLIGSTIWYIAIISAIIFIHNKTRLGYLIAGVLSWITLAFWLFDNYYVVFETSLIANPPNELMIIRNFVGIFVVVLTVIASHNLFHKVIDYQYKGTPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL4</accession>
    <name>A0A087RZL4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00859</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18918">
        <property type="protein sequence ID" value="KFM18918"/>
        <property type="gene ID" value="AAA799P11_00859"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="50" mass="5767" checksum="8FC18D21101BBB0F" modified="2014-10-29" version="1">MQKLCGNDPSGKGEHCYCIDIDAQRGVKKCCQCNQWNVQGNDWTEDEDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0K5</accession>
    <name>A0A087S0K5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA repair protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00777</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19259">
        <property type="protein sequence ID" value="KFM19259"/>
        <property type="gene ID" value="AAA799P11_00777"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.748"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013632">
        <property type="entry name" value="DNA_recomb/repair_Rad51_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08423">
        <property type="entry name" value="Rad51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RECA_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="217" mass="24345" checksum="9571FD85FB10B376" modified="2014-10-29" version="1">MISTGLQKLDKSLSGGIPDGIIVDIFGKNGTGKTQLLLQLAINSIKNGGNVLYFDTTGGFRPERILDIQKTSESQLDFLNHITVSRLTNTSEQINSIKNIDNNFSLIVIDNVTDLFSYEYQKDESVFEKNSLFIKYMHDLANFAISKKIPVVITNMIRNLEGKEIENMKSAIDPFTHIKIHLTKNSSKFNGKIYFPFVESSFSYTIDQSGLSSSEDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L5</accession>
    <name>A0A087S0L5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Translation initiation factor 2 subunit alpha protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">eif2a</name>
        <name evidence="5" type="ORF">AAA799P11_00787</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-2-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19269">
        <property type="protein sequence ID" value="KFM19269"/>
        <property type="gene ID" value="AAA799P11_00787"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.758"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04452">
        <property type="entry name" value="S1_IF2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044126">
        <property type="entry name" value="S1_IF2_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024055">
        <property type="entry name" value="TIF2_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024054">
        <property type="entry name" value="TIF2_asu_middle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011488">
        <property type="entry name" value="TIF_2_asu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10602">
        <property type="entry name" value="PTHR10602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07541">
        <property type="entry name" value="EIF_2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110993">
        <property type="entry name" value="SSF110993"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116742">
        <property type="entry name" value="SSF116742"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="4">
        <location>
            <begin position="12"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="265" mass="30059" checksum="E05396483100A329" modified="2014-10-29" version="1">MSTEVQEMPEQGEIVLATVTKVMDHGAYVTLDEYDNLQGFLHISEIAPGWIRSVSRFVKDGEKKVLLVKKVNPQRGDIDLSLKQVSKDQKKQKLKEVKKFEKGKTLLQNVQEKAKLSDGDIEKLEDSIYSKYDSVYDAFIEIGRNGIDSVKELKIPKKTASVIEEICSKIKLPSVEIRGIMEITNSKSDGIEIIKKVLLDELKKDSTIDITYLGAPKYRLSITSEDFKSAEKSLKPIIADIQSNIEKKKGTFKFTREESKKTREN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L7</accession>
    <name>A0A087S0L7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Dolichyl-phosphooligosaccharide-protein glycotransferase</fullName>
            <ecNumber evidence="6">2.4.99.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Oligosaccharyl transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">AAA799P11_00789</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the STT3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.99.21" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19271">
        <property type="protein sequence ID" value="KFM19271"/>
        <property type="gene ID" value="AAA799P11_00789"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.760"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004576">
        <property type="term" value="F:oligosaccharyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006486">
        <property type="term" value="P:protein glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003674">
        <property type="entry name" value="Oligo_trans_STT3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13872">
        <property type="entry name" value="PTHR13872"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02516">
        <property type="entry name" value="STT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 17" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="14" id="KW-0464">Manganese</keyword>
    <keyword evidence="13 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 17" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="20"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="92"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="141"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="170"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="193"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="216"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="239"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="264"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="298"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="360"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="390"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="413"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="451"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00030679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="KFM19271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="710" mass="79604" checksum="3557D06FAE748E60" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0L8</accession>
    <name>A0A087S0L8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PEBP family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19272">
        <property type="protein sequence ID" value="KFM19272"/>
        <property type="gene ID" value="AAA799P11_00790"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.761"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00865">
        <property type="entry name" value="PEBP_bact_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008914">
        <property type="entry name" value="PEBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036610">
        <property type="entry name" value="PEBP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005247">
        <property type="entry name" value="YbhB_YbcL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30289">
        <property type="entry name" value="PTHR30289"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01161">
        <property type="entry name" value="PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49777">
        <property type="entry name" value="SSF49777"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00481">
        <property type="entry name" value="TIGR00481"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="149" mass="16299" checksum="E6D3B3FC51B7533C" modified="2014-10-29" version="1">MKLESPSFENGGTIPKKFGYKNGNVSPSLIISDIPESAKSLALIMDDPDAIGAVGKVWVHWVLWNVSKDIKKINENSIPENSLEGETDFGEIGYGGPAPPDKEHTYIFKLYALDTVLNLERNSTKADVEKSIQGHIIAEAKLTGKYAPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S109</accession>
    <name>A0A087S109_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00737</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19413">
        <property type="protein sequence ID" value="KFM19413"/>
        <property type="gene ID" value="AAA799P11_00737"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.710"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="437" mass="51327" checksum="AEE1D942386D87EB" modified="2014-10-29" version="1">MQIFANTQVMRNNILDLLVENRLEDDCYVEMLDYTIDLFESRGLGRDYYGYHNINHELEVTYFSLLATKQEKIKFAHEDIKYLYVAALFHDFDPEKSVDKPHEESVLKFISTDRKLNQLIKIANIDLEIIKVLILRTTYPWMGELKKNAEEQIKQCFQNSELTRNNIEYQKHIMDIGWYLTVVDRISGYALGDFSKAMEMAKMNAHALAWRPSLIVRSAVAYFEELLNKETEMVKPVLKILSNEMRKNFFDTVLSFMRIRQQEITIQADCAYKNLRLVPTIECMSTRKDPEFINSLHDILLELPRPLQFLDNFEESVKDPETIITTLRLNGKDGEIVGYAKGGSLENYNLREEIRDENYGLGNTVFLEPIAVKMGYWGLKGGSEMRHMFVMQAHSKKFKYLTSFALRDVINARIEKEQAEFVAQFDPERWDYYRIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S135</accession>
    <name>A0A087S135_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00763</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19439">
        <property type="protein sequence ID" value="KFM19439"/>
        <property type="gene ID" value="AAA799P11_00763"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.736"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="300" mass="33856" checksum="A8D440F1867DC018" modified="2014-10-29" version="1">MNTIDAFEKDIHLQVDFLKSFKKQKPISKTLQKNTIFTGSGDSLISSMLAESFSDGLVRAMDPLDLYKNKHLVKSKHVYFVSISGNTVTNIKVAKFAKKSIAITSKPDSRLAKVSGDVILLNSPTNHVFTAGSITFLESALLCISLVKSMTIPKSSEIFRKAKSDSKVTISKKIYVLGNLLTFPIAMFCAAKFYEVMGYDVQYCRIEQFSHMELFSVKRGDTVIIFEEKNTHNRQLAKNLKKIGINVIHPNLPSGKISQILYCTFFSEFLALNEAKRKRKKDCHFVTAKKIRNVSNQMIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S143</accession>
    <name>A0A087S143_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00771</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19447">
        <property type="protein sequence ID" value="KFM19447"/>
        <property type="gene ID" value="AAA799P11_00771"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.744"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8157" checksum="902E9ECCC2F59E5A" modified="2014-10-29" version="1">MKAGIPMILVGGGMFLAGLIMFYSIELGQTEPTLRLIKNIGTFVGLSGIGVGIAGILLYLINRSQTPVQENFESRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S144</accession>
    <name>A0A087S144_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chromosome segregation ATPase-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00772</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19448">
        <property type="protein sequence ID" value="KFM19448"/>
        <property type="gene ID" value="AAA799P11_00772"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.745"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="114"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="419"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="181"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="114"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="419"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="470"/>
            <end position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="493" mass="56699" checksum="8E7DCC85DEBAD921" modified="2014-10-29" version="1">MSQLTLSQTIENVQSLIDSGNGDPGRLYHILECLKNHRPLYHSDQNYLEKKLESSFSLEEKPEPATENDVLPKIRELINNGVGDPGRLQHIYEMISKNKTLYHSDVSYLESKLNESVLSPQPETETIIEQKQTEYVPPPPKPTPKQTESVAPEPKTAPEPKPSPRGTMPKGWNSSTDSGEIEKISNDIRNEEQKIEKQKSLSSELNAHRSKLTQLVSHRKEYEQKVSQEKATLEAQIQEERLKIESQTKLSEEIIAQKEELAKVKKERAKIIKNINAEKTKIAKELAQQKRQLAQAQLEQEKIEKQVETEQTLLAKMIEEQKSRLLEQASIANEIKSKQDDLEKTKKDYEFIVSQVNEEKAKFAEAEKLKNSIKSKEEDLIKSKEDRLNLITSISKEKELIAKKAKEEKERLKSQAKLAKQLKKEEKNYESLKKKHEKTEQQIKLKNKKLKEKQQKLKQQIAAKDKKLKSLGTKTKKTAKKSTKKTTTKKKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S146</accession>
    <name>A0A087S146_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00774</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19450">
        <property type="protein sequence ID" value="KFM19450"/>
        <property type="gene ID" value="AAA799P11_00774"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="33" mass="3658" checksum="EA9F6E646CCA8660" modified="2014-10-29" version="1" fragment="single">MISIGSAVPGFAQTDSEIFPEWIKTTIKFWAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B9</accession>
    <name>A0A087S1B9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00724</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0111 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19523">
        <property type="protein sequence ID" value="KFM19523"/>
        <property type="gene ID" value="AAA799P11_00724"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.696"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002727">
        <property type="entry name" value="DUF47"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038078">
        <property type="entry name" value="PhoU-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018445">
        <property type="entry name" value="Put_Phosphate_transp_reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36536">
        <property type="entry name" value="PTHR36536"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01865">
        <property type="entry name" value="PhoU_div"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="8"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="217" mass="24492" checksum="F12482964778F8C7" modified="2014-10-29" version="1">MYSGELEVQAKRKAIAVLQDEINRILNASRELAALPELMMKKDKTGIKNTLEQISTIEEEVENLRRKITREVADVGGLIMNRENLLNTAYTMDEIAGYITGISFKLSNVKPTTLKSAKLDKDLTKLIELVVDQVYKLNEIIRSLNTNTANAIELAQETQTIEREIDTKYRQATIKLLTGVTNTKELMLMKDVIEGIEEMADKCQRVSDSFILLALSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C5</accession>
    <name>A0A087S1C5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19529">
        <property type="protein sequence ID" value="KFM19529"/>
        <property type="gene ID" value="AAA799P11_00730"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="46" mass="5178" checksum="EA4B5234EDA29C53" modified="2014-10-29" version="1">MVEPVCNTCGDVMKPSKILPDQKGDGFEVSNMTMYHCPKCNPEKFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H5</accession>
    <name>A0A087S1H5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Lysine biosynthesis protein LysX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00568</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19579">
        <property type="protein sequence ID" value="KFM19579"/>
        <property type="gene ID" value="AAA799P11_00568"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.552"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="48" mass="5594" checksum="1A03E9DEAFAD1D9C" modified="2014-10-29" version="1">MSPDVTILYDTIRWEEKGLLEAGKKKNINIQMVDCKKLAIDLEKKIME</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H7</accession>
    <name>A0A087S1H7_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative [LysW]-lysine/[LysW]-ornithine hydrolase</fullName>
            <ecNumber evidence="2">3.5.1.130</ecNumber>
            <ecNumber evidence="2">3.5.1.132</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">lysK</name>
        <name evidence="4" type="ORF">AAA799P11_00570</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[amino-group carrier protein]-C-terminal-gamma-(L-lysyl)-L-glutamate + H2O = [amino-group carrier protein]-C-terminal-L-glutamate + L-lysine</text>
            <dbReference type="Rhea" id="RHEA:48684"/>
            <dbReference type="Rhea" id="RHEA-COMP:9693"/>
            <dbReference type="Rhea" id="RHEA-COMP:9715"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:78525"/>
            <dbReference type="ChEBI" id="CHEBI:78526"/>
            <dbReference type="EC" id="3.5.1.130"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[amino-group carrier protein]-C-terminal-gamma-(L-ornithyl)-L-glutamate + H2O = [amino-group carrier protein]-C-terminal-L-glutamate + L-ornithine</text>
            <dbReference type="Rhea" id="RHEA:52676"/>
            <dbReference type="Rhea" id="RHEA-COMP:9693"/>
            <dbReference type="Rhea" id="RHEA-COMP:13328"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="ChEBI" id="CHEBI:78525"/>
            <dbReference type="ChEBI" id="CHEBI:136763"/>
            <dbReference type="EC" id="3.5.1.132"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="2">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <text evidence="2">Binds 2 Zn(2+) or Co(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-arginine biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-lysine biosynthesis via AAA pathway; L-lysine from L-alpha-aminoadipate (Thermus route): step 5/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M20A family. LysK subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.130" evidence="2"/>
    <dbReference type="EC" id="3.5.1.132" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19581">
        <property type="protein sequence ID" value="KFM19581"/>
        <property type="gene ID" value="AAA799P11_00570"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.554"/>
    <dbReference type="UniPathway" id="UPA00033">
        <property type="reaction ID" value="UER00039"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050897">
        <property type="term" value="F:cobalt ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016811">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042450">
        <property type="term" value="P:arginine biosynthetic process via ornithine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019878">
        <property type="term" value="P:lysine biosynthetic process via aminoadipic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01120">
        <property type="entry name" value="LysK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001261">
        <property type="entry name" value="ArgE/DapE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010175">
        <property type="entry name" value="LysK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01902">
        <property type="entry name" value="dapE-lys-deAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00758">
        <property type="entry name" value="ARGE_DAPE_CPG2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0170">Cobalt</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="M20_dimer" evidence="3">
        <location>
            <begin position="163"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="341"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="375" mass="41639" checksum="887F83D44BD4AAA7" modified="2014-10-29" version="1">MDTHFTVTPRFATKMLEKALRLYTPSLSEKPMAEFLADKCDDLGFEDIQIDEVGNVIARKGSGTPKIMLCGHMDVVPGKVKVRKEGDSLYGRGASDAKAPLMAMLFAAASIQNNNGTIIFVGAVDEEGNATGIKNLVKKEMNVDYAVFGEPSGIKQVTIAYKGRLAINLKISVEDSSHASAPWLSKNAILESMIFARELKEKLEENQDDRTKGMLLTATMTEVKGGTSHNVTPKECETTFDIRIPVDMNCKSIEQKIANLVKDIAEKREVEAFYSILDETEPFEAAHNSPLVRAFTLGIMDVEQSRPKLIRKTGTGDMNVLGTQWNIPVVTYGPGDPHEAHTIDEKVSIEEYLRGIEILKKMLQHLKRLHDRKMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H8</accession>
    <name>A0A087S1H8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Diphthine synthase protein</fullName>
            <ecNumber evidence="8">2.1.1.98</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dphB</name>
        <name evidence="8" type="ORF">AAA799P11_00571</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; peptidyl-diphthamide biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the diphthine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.98" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19582">
        <property type="protein sequence ID" value="KFM19582"/>
        <property type="gene ID" value="AAA799P11_00571"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.555"/>
    <dbReference type="UniPathway" id="UPA00559"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004164">
        <property type="term" value="F:diphthine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017183">
        <property type="term" value="P:peptidyl-diphthamide biosynthetic process from peptidyl-histidine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd11647">
        <property type="entry name" value="DHP5_DphB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036809">
        <property type="entry name" value="AF1782-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004551">
        <property type="entry name" value="Dphthn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023140">
        <property type="entry name" value="DUF357"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10882">
        <property type="entry name" value="PTHR10882"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04010">
        <property type="entry name" value="DUF357"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158372">
        <property type="entry name" value="SSF158372"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00522">
        <property type="entry name" value="dph5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="DUF357" evidence="7">
        <location>
            <begin position="273"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM19582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="345" mass="39011" checksum="ED897D22E73C0FAB" modified="2014-10-29" version="1">MLWFVGLGISGFKSIPNEAINVLAKADMVYLEQFTSPISKSDLTKIKKATKGEFRPAKRWLVEDGNEILENAKKKKVVLLSYGDPYIATTHIELRERAIKEKIKTHSIHASSSLTSMIGECGLHFYKVGRIATIMSEMKSLTTPYYVIYKNVIEGNHTVLLLEFNQDKDFFLDPKDALKGLLETEKGQRRKVINSSTFAIVASRIGFKDQEIVSGKISSLKKRDFGKPPHTVIIPGRLHFTESDALKVLGECIEEPFDNAEKTRKISAQMIEKYVPMVREALEEVEPYYKDQKEFQVILENAELYVRDAEKFLEDGQDEVAILSIGYADGLVDALRLAKGLDPKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I0</accession>
    <name>A0A087S1I0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00573</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19584">
        <property type="protein sequence ID" value="KFM19584"/>
        <property type="gene ID" value="AAA799P11_00573"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.557"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="144" mass="16675" checksum="893D13B87EA0DFB5" modified="2014-10-29" version="1">MIKQITVAIITPTHDKKSFELGLELAKKLDCSLSVIECFYQKPPTFHFFETKTDKIALQKRKEQIKNELSKWEKAAAKQNVPIKTKFALTDSIAHWVIDYVTENKVDLLIVDYPRLSMTESTLYDDIINTIHHKAKCHVLTTKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I1</accession>
    <name>A0A087S1I1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Riboflavin kinase</fullName>
            <ecNumber evidence="6">2.7.1.161</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">CTP-dependent riboflavin kinase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17">CTP:riboflavin 5'-phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="15">Flavokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">ribK</name>
        <name evidence="19" type="ORF">AAA799P11_00574</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>CTP + riboflavin = CDP + FMN + H(+)</text>
            <dbReference type="Rhea" id="RHEA:25021"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:57986"/>
            <dbReference type="ChEBI" id="CHEBI:58069"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="EC" id="2.7.1.161"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; FMN biosynthesis; FMN from riboflavin (CTP route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the archaeal riboflavin kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="19">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.161" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19585">
        <property type="protein sequence ID" value="KFM19585"/>
        <property type="gene ID" value="AAA799P11_00574"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.558"/>
    <dbReference type="UniPathway" id="UPA00276">
        <property type="reaction ID" value="UER00929"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008531">
        <property type="term" value="F:riboflavin kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009398">
        <property type="term" value="P:FMN biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039063">
        <property type="entry name" value="RibK_CTP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023602">
        <property type="entry name" value="Riboflavin_kinase_CTP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023465">
        <property type="entry name" value="Riboflavin_kinase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40706">
        <property type="entry name" value="PTHR40706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01982">
        <property type="entry name" value="CTP-dep_RFKase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82114">
        <property type="entry name" value="SSF82114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0288">FMN</keyword>
    <keyword evidence="13 19" id="KW-0418">Kinase</keyword>
    <keyword evidence="14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 19" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP-dep_RFKase" evidence="18">
        <location>
            <begin position="102"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00017394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00029789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00030544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00033116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF01982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="KFM19585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="227" mass="25379" checksum="960D7569DCA354C8" modified="2014-10-29" version="1">MPELKIQHILTLSYLLSKGAKHNYVSITTSSLGKNIKKSQQAASKHLLELEQNQFIDRILTGRNVSVKITSKGFSEMVKLSTTLQKSLNSFPSHVELKGTLVSGMGEGAYYMGLKGYTKQFKSKIGYVPFPGTLNVRLDQKIHQEAVKQFETLDGIKIKSFSDGKRTYGWVKCFPAKLNNSINCDMILLERTHHDNSVVELISKTCLRKTAKLKDGSKITIKIPISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I6</accession>
    <name>A0A087S1I6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00579</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19590">
        <property type="protein sequence ID" value="KFM19590"/>
        <property type="gene ID" value="AAA799P11_00579"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="116" mass="13330" checksum="B38C51A98AD1E291" modified="2014-10-29" version="1">MVIMQELVQTRKIMDDERKQIILEVLSDKYCKQILHDTLEKPKSAMELSSDKKIPISTVYRRLQTLYDAKLLAISGSINEDGKKYFLYKSKVKSISLKCNLEETSIEIVPNSSNTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I7</accession>
    <name>A0A087S1I7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Plastocyanin protein</fullName>
            <ecNumber evidence="2">1.7.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19591">
        <property type="protein sequence ID" value="KFM19591"/>
        <property type="gene ID" value="AAA799P11_00580"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.564"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050421">
        <property type="term" value="F:nitrite reductase (NO-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Copper-bind" evidence="1">
        <location>
            <begin position="98"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="174" mass="19319" checksum="30E0EE03B86A3C80" modified="2014-10-29" version="1">MKRSSKTMVVLVLVFAVSIVSLSVNLASAQAVPEWVKNTALWYGEGIVSEGEFLNMIKFLIENEVIIIDSMKEPVPQVVDAQVVIPNGNFDVTGAGFYSPLNLEVPVGTTVTWVNDDSVPHNIQSIDKTGKVIQLFNSPPLNTGDRFEYTFEEEGVYKYYCSFHPWRVGLVTVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L1</accession>
    <name>A0A087S1L1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00604</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19615">
        <property type="protein sequence ID" value="KFM19615"/>
        <property type="gene ID" value="AAA799P11_00604"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="62" mass="7021" checksum="4A3D9F26F8E316AD" modified="2014-10-29" version="1">MSDSELIGGGIVGGLIGYQKGFETGHKQGYVKGRNETIWEYERQITALQHELAESKQRQKRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P6</accession>
    <name>A0A087S1P6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Orotidine-5'-phosphate decarboxylase</fullName>
            <ecNumber evidence="3">4.1.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pyrF</name>
        <name evidence="6" type="ORF">AAA799P11_00639</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + orotidine 5'-phosphate = CO2 + UMP</text>
            <dbReference type="Rhea" id="RHEA:11596"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="EC" id="4.1.1.23"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 2/2.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.23" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19650">
        <property type="protein sequence ID" value="KFM19650"/>
        <property type="gene ID" value="AAA799P11_00639"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.625"/>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004590">
        <property type="term" value="F:orotidine-5'-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014732">
        <property type="entry name" value="OMPdecase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011995">
        <property type="entry name" value="OMPdecase_type-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001754">
        <property type="entry name" value="OMPdeCOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43375">
        <property type="entry name" value="PTHR43375"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00215">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00934">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01740">
        <property type="entry name" value="pyrF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OMPdecase" evidence="5">
        <location>
            <begin position="17"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="246" mass="27017" checksum="9015367D71F5A8F1" modified="2014-10-29" version="1">MLTFKTRLSQIAKTNGKVILANDYDPSVKNLDTKTISNIKKLHPYLCAVKLNFHLLLPLSGKQIQKINKIAHQYGLQTIADIKLNDIGNTNRVTTENLWKLGFDAVIANPIMGLDSLKNLVKSAHKNGKGVITLCHMSAPEAKLSYDMEVKMRKKQQLYQLFLDWALEAKVDGIVVGATFPKIIQYCSKKAGRKLGIFSPGVGTQGGNASEIISAGTNYLIVGRTILNAKKPTDVAKNLQLDSLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q4</accession>
    <name>A0A087S1Q4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">tRNA threonylcarbamoyladenosine biosynthesis protein RimN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rimN</name>
        <name evidence="2" type="ORF">AAA799P11_00647</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19658">
        <property type="protein sequence ID" value="KFM19658"/>
        <property type="gene ID" value="AAA799P11_00647"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.633"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003725">
        <property type="term" value="F:double-stranded RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017945">
        <property type="entry name" value="DHBP_synth_RibB-like_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006070">
        <property type="entry name" value="YrdC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01300">
        <property type="entry name" value="Sua5_yciO_yrdC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55821">
        <property type="entry name" value="SSF55821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00057">
        <property type="entry name" value="TIGR00057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51163">
        <property type="entry name" value="YRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YrdC-like" evidence="1">
        <location>
            <begin position="18"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="209" mass="23543" checksum="DF52330A272EB3E9" modified="2014-10-29" version="1">MVIKQKKYYKSLKVNCDNEGIAKASQIIEQGGIVVFPTDTVYGIGCNPYNKESAKKVYEIKSRDFSKPFPVLVYSKEIAKQIAEFDEISEKLAEKFWPGQLTILLKLKDMKLKESLNITDKIALRVPNHKCTLQILEKCKYLVGTSANVSGQSSFFDPQECIKNVENYDVFVDGGTITSKGESTIVEIEDGKVKIIREGSLSKEEIWNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q8</accession>
    <name>A0A087S1Q8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative archaeal histone 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00651</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the archaeal histone HMF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19662">
        <property type="protein sequence ID" value="KFM19662"/>
        <property type="gene ID" value="AAA799P11_00651"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.637"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003958">
        <property type="entry name" value="CBFA_NFYB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00808">
        <property type="entry name" value="CBFD_NFYB_HMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="SSF47113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0158">Chromosome</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBFD_NFYB_HMF" evidence="5">
        <location>
            <begin position="8"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="73" mass="7924" checksum="800D6F0404EA07FF" modified="2014-10-29" version="1">MKSSELGLSAMYRILKKAGAERVSDESADELRRVIEEVANGIAKSAVDMASHAGRKTVKGEDVKLASKPFNKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R2</accession>
    <name>A0A087S1R2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Translation initiation factor 1A</fullName>
            <shortName evidence="1">aIF-1A</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">eif1a</name>
        <name evidence="4" type="ORF">AAA799P11_00655</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-1A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19666">
        <property type="protein sequence ID" value="KFM19666"/>
        <property type="gene ID" value="AAA799P11_00655"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.641"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd05793">
        <property type="entry name" value="S1_IF1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00216">
        <property type="entry name" value="aIF_1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001253">
        <property type="entry name" value="TIF_eIF-1A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21668">
        <property type="entry name" value="PTHR21668"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01176">
        <property type="entry name" value="eIF-1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00652">
        <property type="entry name" value="eIF1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="1 2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1-like" evidence="3">
        <location>
            <begin position="13"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="100" mass="11999" checksum="7784FA61DF98562B" modified="2014-10-29" version="1">MGKRQVKNEKALKEIRLPETDEEMFGRVIKMMGVVKCADKIVRRGRIRGKLKRRVWIRDNDVVIIAPWEFGKEGRGDILWRYTLPQVEWLKQEKYIPLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S4</accession>
    <name>A0A087S1S4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00672</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19678">
        <property type="protein sequence ID" value="KFM19678"/>
        <property type="gene ID" value="AAA799P11_00672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="67" mass="7763" checksum="F937A6F230CE323D" modified="2014-10-29" version="1">MFFISSRKSRSTLGLKEKCAICSQEIKLPFKPMKEWGIEGTLCGDCYSKKIHEFYPGDHVRVNKHLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1T0</accession>
    <name>A0A087S1T0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative phosphoglucosamine mutase protein</fullName>
            <ecNumber evidence="9">5.4.2.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">glmM</name>
        <name evidence="9" type="ORF">AAA799P11_00683</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.8" evidence="9"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19684">
        <property type="protein sequence ID" value="KFM19684"/>
        <property type="gene ID" value="AAA799P11_00683"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.663"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004615">
        <property type="term" value="F:phosphomannomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005845">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005843">
        <property type="entry name" value="A-D-PHexomutase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005841">
        <property type="entry name" value="Alpha-D-phosphohexomutase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02879">
        <property type="entry name" value="PGM_PMM_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00408">
        <property type="entry name" value="PGM_PMM_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00509">
        <property type="entry name" value="PGMPMM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="SSF55957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_I" evidence="6">
        <location>
            <begin position="6"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_II" evidence="7">
        <location>
            <begin position="138"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_III" evidence="8">
        <location>
            <begin position="251"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_IV" evidence="5">
        <location>
            <begin position="380"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="432" mass="47107" checksum="BBB3636874FA554F" modified="2014-10-29" version="1">MKKTISGIRGIFGQDLNLKDVLKFCNNFSSLVKSGKCTIGKDTRPSGSMIKDTASAALMKNGIDVFDLGTVPTPVVFREARKYGAGIVVSSSHNPIEWNGLKFIIEGRGINEKELPKIIQKQEIKSEKIGSEQEISSSYIEDARKIIGDLESQPQVAVDIGGGAAKGFAPELLESIGCKVQVLNENLQGCTRGPDPTADNLDDLVAASSNKEIGFAFDLDGDRLVVVRNGKKQTPDVTLGLGVAKSLELGYKNFVLSIDTSVSVEKFIKDNGGTVQRTKVGEANVIEQMINQNAQAGGEGSSGGFILPEFNYCREGILTSGLISSMLGTQKFNEVLNFMESYFQIRDKTAIDAQLHDKVIDDVHSKLSKEYSEVITLDGVKGIIDENSWVLIRKSNTEDIIRVSAESNDENKCKQIVKDTIELVNQSYEQVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y7</accession>
    <name>A0A087S1Y7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00481</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19741">
        <property type="protein sequence ID" value="KFM19741"/>
        <property type="gene ID" value="AAA799P11_00481"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="6729" checksum="770B64EDC394722B" modified="2014-10-29" version="1">MTADTESKIQESGISAAELISHFREKCKICGHHRIMHDAMGKCEGVMNKPCTSGCDKFEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y9</accession>
    <name>A0A087S1Y9_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Flap endonuclease 1</fullName>
            <shortName evidence="10">FEN-1</shortName>
            <ecNumber evidence="10">3.1.-.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Flap structure-specific endonuclease 1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">fen</name>
        <name evidence="13" type="ORF">AAA799P11_00488</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Binds 2 magnesium ions per subunit. They probably participate in the reaction catalyzed by the enzyme. May bind an additional third magnesium ion after substrate binding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Interacts with PCNA. PCNA stimulates the nuclease activity without altering cleavage specificity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the XPG/RAD2 endonuclease family. FEN1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19743">
        <property type="protein sequence ID" value="KFM19743"/>
        <property type="gene ID" value="AAA799P11_00488"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.466"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008409">
        <property type="term" value="F:5'-3' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017108">
        <property type="term" value="F:5'-flap endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043137">
        <property type="term" value="P:DNA replication, removal of RNA primer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00614">
        <property type="entry name" value="Fen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036279">
        <property type="entry name" value="5-3_exonuclease_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023426">
        <property type="entry name" value="Flap_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019973">
        <property type="entry name" value="Flap_structure-sp_endonuc_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008918">
        <property type="entry name" value="HhH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006086">
        <property type="entry name" value="XPG-I_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006084">
        <property type="entry name" value="XPG/Rad2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019974">
        <property type="entry name" value="XPG_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006085">
        <property type="entry name" value="XPG_DNA_repair_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11081">
        <property type="entry name" value="PTHR11081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00867">
        <property type="entry name" value="XPG_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00752">
        <property type="entry name" value="XPG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00853">
        <property type="entry name" value="XPGRADSUPER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00279">
        <property type="entry name" value="HhH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00484">
        <property type="entry name" value="XPGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00485">
        <property type="entry name" value="XPGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47807">
        <property type="entry name" value="SSF47807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03674">
        <property type="entry name" value="fen_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00841">
        <property type="entry name" value="XPG_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9 10" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4 10 13" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7 10" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="6 10 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 10" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XPGN" evidence="12">
        <location>
            <begin position="1"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="XPGI" evidence="11">
        <location>
            <begin position="140"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="N-domain" evidence="10">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="152"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="KFM19743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="340" mass="38538" checksum="A4F7A4E94F32006F" modified="2014-10-29" version="1">MGLNLKDLVVREKTTLEAFSNKVIAIDAYNAIYQFLASIRGPDGLQLSDSEGRITSHLSGLLYRNVNFLSLGIKPVYVFDGKPPSLKTAEIERRKQIKKDATIKYEKAIADGNMEDARKYAQQTTSMKDGMVKESKQLLTYFGIPYIEAPSEGEATAAHLTNTGQAYASASQDFDSILCGAKRLVRNFTNSGRRKIPNKNTYIDIVPEIIETQKTLDSLELTRKELIDIGILIGTDFNPNGFERVGPKTALKMIKQYSRLEDIPQIQEQLEEIDFQEIRKIFLNPEVADVKEIVFGNVDYEGMTNYLVKERSFSEDRVNSTLNRLKKALEKKSQNLDQWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z0</accession>
    <name>A0A087S1Z0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Two-component system chemotaxis family CheB-CheR fusion protein</fullName>
            <ecNumber evidence="2">2.1.1.80</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00489</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.80" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19744">
        <property type="protein sequence ID" value="KFM19744"/>
        <property type="gene ID" value="AAA799P11_00489"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.467"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008983">
        <property type="term" value="F:protein-glutamate O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="2"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="174" mass="20280" checksum="165A2ED6C7C0556E" modified="2014-10-29" version="1">MPQTEARKTLKDAPVMWRRINSIGAILDCNSTYAANLGYSKSEILGKTIFEHVPKEEWQDMNNSLKTWFETGKVTDRKIIFKRQDGSTFPGLLHATSLYDENKNLLGSNTVIFDLTQMTDEKIKEYEQFFKDANNRLDEIKEKEYNELDEESKSEYDGLKDMFKMLSTIDLKKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z6</accession>
    <name>A0A087S1Z6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Homoserine dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">hom</name>
        <name evidence="10" type="ORF">AAA799P11_00495</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 3/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 3/5.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.3" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19750">
        <property type="protein sequence ID" value="KFM19750"/>
        <property type="gene ID" value="AAA799P11_00495"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.473"/>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00063"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004412">
        <property type="term" value="F:homoserine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005106">
        <property type="entry name" value="Asp/hSer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001342">
        <property type="entry name" value="HDH_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022697">
        <property type="entry name" value="HDH_short"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00742">
        <property type="entry name" value="Homoserine_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03447">
        <property type="entry name" value="NAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036497">
        <property type="entry name" value="HDH_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7" id="KW-0521">NADP</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_3" evidence="9">
        <location>
            <begin position="7"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="Homoserine_dh" evidence="8">
        <location>
            <begin position="156"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="6">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="7"/>
            <end position="12"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR036497-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR036497-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="336" mass="36087" checksum="C58EACF2247500F7" modified="2014-10-29" version="1">MRIILCGFGVVGQSLVKLFESRAEDLYAKYGLKPRVVGVFDSKGSAVNPSGLELNKLIEVKKKFGTVKNYADTKNTMSGIEMLKNVEADVLIETTASNYKDAEPGMTHIITAMKKGMHVISVNKGPLALAFPSLMELATYNQVMFKFSGTVGGGTPILDYAKNSLSGERIISFAGILNGTTNYILTNMATGTSYEDALKDAQDKGYVEADESLDLDGLDAAAKLVILANWIMGMKVTMPDINCTGIRKVTTEDIKKAAKNNCAVKLIASCNKELIVAPKEIPNDDPLCVNGTLNAIAFTSEHSGTQTIIGRGAGGMETASSILRDLLDIRQEIART</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Z8</accession>
    <name>A0A087S1Z8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mut7-C RNAse domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00497</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19752">
        <property type="protein sequence ID" value="KFM19752"/>
        <property type="gene ID" value="AAA799P11_00497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002782">
        <property type="entry name" value="Mut7-C_RNAse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01927">
        <property type="entry name" value="Mut7-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mut7-C" evidence="1">
        <location>
            <begin position="3"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="156" mass="17860" checksum="2C6A7564A0BF6750" modified="2014-10-29" version="1">MLFIVDAMLGNVAKKLRLLGFDAEYLSDVDDSVLIEKSKNENRVIITKDNELTEKAKKNGLSVVYIAQENEIEQFLEILKQTNLKLNGISGDVARCTKCNSLTYAIEKSKILQNVPQGVLENNDRFWKCKNCDQIYWEGTHIKNLQKFVKKLKTFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S203</accession>
    <name>A0A087S203_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">tRNA-methyltransferase TrmI protein</fullName>
            <ecNumber evidence="6">2.1.1.219</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">trmI</name>
        <name evidence="6" type="ORF">AAA799P11_00502</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.219" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19757">
        <property type="protein sequence ID" value="KFM19757"/>
        <property type="gene ID" value="AAA799P11_00502"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.480"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031515">
        <property type="term" value="C:tRNA (m1A) methyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016429">
        <property type="term" value="F:tRNA (adenine-N1-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014816">
        <property type="entry name" value="tRNA_MeTrfase_Gcd14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12133">
        <property type="entry name" value="PTHR12133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08704">
        <property type="entry name" value="GCD14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017269">
        <property type="entry name" value="GCD14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51620">
        <property type="entry name" value="SAM_TRM61"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="4">
        <location>
            <begin position="107"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="260"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR017269-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="302" mass="33948" checksum="40ECF00C54A41328" modified="2014-10-29" version="1">MDKIKQNSPVLFYFNHSKKWLAKISKKDSLHTHIGVIKHSDAIGKEYGSRLVTNKDKYVYLLKPTMYDYVMKIQHGTQIVYPKDIGYIIARAGIQSGQKILEIGTGSGSLTSCIASIVKPRGHVYTFDVDENFMKIAEKNIEKAGVSKYVTQHNQDLKIAKKMPLKDMDVALIDLGDPWVVIPQVREMLKGSGSIFAICPTMNQLEKLTMALVENEFTDIESTEHILRTIEAREGKTRHSFQGIGHTTYLCFARKAFFGRKSKKSSSKTTKSVSKTSKKTTKTTKTTKTTKKTAKKASKKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S213</accession>
    <name>A0A087S213_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphoglycolate phosphatase</fullName>
            <shortName evidence="1">PGP</shortName>
            <shortName evidence="1">PGPase</shortName>
            <ecNumber evidence="1">3.1.3.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00512</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the dephosphorylation of 2-phosphoglycolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-phosphoglycolate + H2O = glycolate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14369"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29805"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58033"/>
            <dbReference type="EC" id="3.1.3.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the archaeal SPP-like hydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.18" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19767">
        <property type="protein sequence ID" value="KFM19767"/>
        <property type="gene ID" value="AAA799P11_00512"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.494"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008967">
        <property type="term" value="F:phosphoglycolate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01419">
        <property type="entry name" value="GPH_hydrolase_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006382">
        <property type="entry name" value="PGPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="231" mass="25061" checksum="A0CCBC5521BC16C4" modified="2014-10-29" version="1">MKKRTFAVDIDGTITENGGGRIHLDALEALRRLTNMGHDVIFVTGRSSVEGFLLSVFGGTTKITVGENGGCITLDSNDHILLGSIDECKKALDVLKNNMENVEEKYVFPRMTEVVLQRTFDLDQARKVLSEHNIDVELSDSQYAYHINSPGIDKGTGFTEIMKRFSISKEDVIAIGDSATDVPLFKVAKTSVALGNASDDVKSEATMTVSAHAGDGVLEALDKLAPRLSEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S214</accession>
    <name>A0A087S214_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00513</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19768">
        <property type="protein sequence ID" value="KFM19768"/>
        <property type="gene ID" value="AAA799P11_00513"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.495"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="75" mass="8783" checksum="E0425FD91F99C02F" modified="2014-10-29" version="1">MAKKGIIEEIFSKAKFADETQSYKIFYRNFERIVETTLPEFLVQSDNLQTIPISRIKKIEKNNTVLFEKKLPGSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S218</accession>
    <name>A0A087S218_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Triple helix repeat-containing collagen protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00517</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19772">
        <property type="protein sequence ID" value="KFM19772"/>
        <property type="gene ID" value="AAA799P11_00517"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.499"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008160">
        <property type="entry name" value="Collagen"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01391">
        <property type="entry name" value="Collagen"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0176">Collagen</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="102"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="204"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="482"/>
            <end position="499"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="539" mass="52967" checksum="C305979FB0DD1187" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2A4</accession>
    <name>A0A087S2A4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00392</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19858">
        <property type="protein sequence ID" value="KFM19858"/>
        <property type="gene ID" value="AAA799P11_00392"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.377"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="206" mass="23353" checksum="74D6B462AFC65A5D" modified="2014-10-29" version="1">MVDIFEIFGELSYFGIFLVLILVNASPILMPPSWIVLTSFYLLDPSLNVVFLAMVGATGATIGRLFLKKISGLFRKFVGEEQKTNLDIIGDYLNHKKYGYLLASFLFGATPLPSNMLFITYGLMRAKNIGIYIGFWLGRTISYIIMIYFGNVVLQPFLEIFEDRLTGILLIDGVGIGVIVLFASINWTVLITQRKIKFVKPKIWRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2B6</accession>
    <name>A0A087S2B6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcription initiation factor IIB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">AAA799P11_00404</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19870">
        <property type="protein sequence ID" value="KFM19870"/>
        <property type="gene ID" value="AAA799P11_00404"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.389"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017025">
        <property type="term" value="F:TBP-class protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070897">
        <property type="term" value="P:transcription preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00043">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000812">
        <property type="entry name" value="TFIIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013150">
        <property type="entry name" value="TFIIB_cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013137">
        <property type="entry name" value="Znf_TFIIB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11618">
        <property type="entry name" value="PTHR11618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08271">
        <property type="entry name" value="TF_Zn_Ribbon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00382">
        <property type="entry name" value="TFIIB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00685">
        <property type="entry name" value="TIFACTORIIB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="SSF47954"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51134">
        <property type="entry name" value="ZF_TFIIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TFIIB-type" evidence="5">
        <location>
            <begin position="5"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="KFM19870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="318" mass="35104" checksum="C8C46CD51762A383" modified="2014-10-29" version="1">MNVLEKQNCPECQATVVNDMQNGEIICSGCGVVVDDQVADYGPETISSNLEDKMKLARATGQTTYSQHDLGITTEIAISSKDFSGKTINHEVANQMHNLRKWQQRVRVSTPKERRLANVLTKMGETCDGLGLSKNVLETASMIYRNLDGHVDVKGKSVVSITAATIYMACKQCDVVRSLEEIIRGICPPKDVKSKTKLAARYYRTMVMEMGQLTAPVVTMDKYISKIANMTQTEVRVERLALEIAEKTKDSSIADGKAPNGIAAAYLYVSSVLLGQNVLQRDVSSIAGVTEVTIRNRCKEILTNYKLKITLRPSLAKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C3</accession>
    <name>A0A087S2C3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00411</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19877">
        <property type="protein sequence ID" value="KFM19877"/>
        <property type="gene ID" value="AAA799P11_00411"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="49" mass="5513" checksum="380D6E24ABB23F86" modified="2014-10-29" version="1">MDVKTGSEVALAHLKNKQFITAHTLFSDQAESVKKIRTYQICIIVFVSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C9</accession>
    <name>A0A087S2C9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00422</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19883">
        <property type="protein sequence ID" value="KFM19883"/>
        <property type="gene ID" value="AAA799P11_00422"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.402"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="202" mass="23200" checksum="499FBEFCA072571C" modified="2014-10-29" version="1">MSELKLSYSGYVCAPYLHTHESIDLKESWLNSKNIERLYFVTGTFSSESKPYFSDSTNHYLLAKFKDSAKIADDLADHNQEKTSFVFNVKDDLFQHEVLGDVNFVSVYYLEYGEDEDVSEIAHLLVKKEQIESAGIGNMETFCKNPSKFTFPYSENIIVIEVASEKSHQSVKKYCEQTRRDANRKGLSMTNLMSLSILEQLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2F0</accession>
    <name>A0A087S2F0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00443</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19904">
        <property type="protein sequence ID" value="KFM19904"/>
        <property type="gene ID" value="AAA799P11_00443"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.424"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004106">
        <property type="term" value="F:chorismate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046417">
        <property type="term" value="P:chorismate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.59.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036263">
        <property type="entry name" value="Chorismate_II_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036979">
        <property type="entry name" value="CM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002701">
        <property type="entry name" value="CM_II_prokaryot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01817">
        <property type="entry name" value="CM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00830">
        <property type="entry name" value="CM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48600">
        <property type="entry name" value="SSF48600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51168">
        <property type="entry name" value="CHORISMATE_MUT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Chorismate mutase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="456" mass="51281" checksum="0FAD6B5C5D84AB63" modified="2014-10-29" version="1">MSDINDLRNKMDEVTLQMIKLLKTRTDIAKEIGEVKKNIGKGVTDETREENLRGKVISLCQEIGLDEKIATKFLNFLLNESIKVQSSNKQTHLSIFLKAKELEQQGKNIIHMEVGEPDFLPPTIVKDALEEVFDKGFLKYGQAKGMPIFREALAKHASKKFNVDISQDNIIVSPGARFSIFTAITTLLNPGDEMIVIDPAWPAYKDCALNAGIKVRTINTSFENKWEPSIEQIQNTINTNTKMIVLNYPNNPTGKILPEKLQDQIIEIAKKNNLYILSDEIYSEYVKSNWKSVLSYNYEKSIVTQSFSKSHAMTGFRIGYAIADGKIIEKMAKLEALCLTNVSEPIQYIAMRALEADTSNNNKTVQDRLDILIQKANEMNLDIVVPDGAMYIFARVNKEGFDGVQFANSTLEKGLAVAPGEGFGNYKNFIRISACQDEKTLIEGMNILKNIMSEDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2L5</accession>
    <name>A0A087S2L5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cytochrome c-type biosis protein CcdA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ccdA</name>
        <name evidence="3" type="ORF">AAA799P11_00273</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19969">
        <property type="protein sequence ID" value="KFM19969"/>
        <property type="gene ID" value="AAA799P11_00273"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.267"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003834">
        <property type="entry name" value="Cyt_c_assmbl_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02683">
        <property type="entry name" value="DsbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="domain" description="DsbD" evidence="2">
        <location>
            <begin position="11"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="244" mass="26188" checksum="F22366B614905E67" modified="2014-10-29" version="1">MTEITLAVAALAGLSSFVAPCILPMIPAFLAYISGTTLSELNQKDGTKTVSINRANIILNSVFFVLGFSVVFSTLGVIINSTLSSASGELVEGLNQVGGIIIVGFGIFLLLSMKINKLNLEKKFFPKRTKASYPMSFVFGLAFAAGWTPCVGPILGTILTLAATTPSVAFNLLLVYSLGLGIPFILIGVFYSRANKIIRSMSKHLKYYNIVLGSFIVILGVLVYTNQLAYIANFPLLNELLFLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2P3</accession>
    <name>A0A087S2P3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00301</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19997">
        <property type="protein sequence ID" value="KFM19997"/>
        <property type="gene ID" value="AAA799P11_00301"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.295"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="129" mass="13172" checksum="CF1FD75F89E1CEA9" modified="2014-10-29" version="1">MALTAALVITGIAIGLLLIYAADVAVAMSSDSDYGFLPLDHMQRGMGLGAPALILPIIAFFISLKEPSKGLGVMIIITGILIILGGIVVMVNPAPSAETSDRDPIASMAMMLVPAAIQLALGGIKIAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q9</accession>
    <name>A0A087S2Q9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00318</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20013">
        <property type="protein sequence ID" value="KFM20013"/>
        <property type="gene ID" value="AAA799P11_00318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="48" mass="5763" checksum="58FC654B3EDFB211" modified="2014-10-29" version="1">MAETKKTCLRCKKDIAEQDLHKIVIYVVQEKFTEHHYEHVECPDKFTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S0</accession>
    <name>A0A087S2S0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00329</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20024">
        <property type="protein sequence ID" value="KFM20024"/>
        <property type="gene ID" value="AAA799P11_00329"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="88" mass="10008" checksum="A808CF37583FDC86" modified="2014-10-29" version="1">MHKCKMGEPSEPILFRGSPRFRREITQSEPSEPSEPLLQLLSEKNKIFDSLESQKEAHRPHRPHSRRKTGEAMIFVSSLASPNGVILS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2V1</accession>
    <name>A0A087S2V1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Phosphonates import ATP-binding protein PhnC 2</fullName>
            <ecNumber evidence="5">3.6.3.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">phnC2</name>
        <name evidence="5" type="ORF">AAA799P11_00365</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.28" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20055">
        <property type="protein sequence ID" value="KFM20055"/>
        <property type="gene ID" value="AAA799P11_00365"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.354"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="21"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="54"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM20055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="276" mass="30836" checksum="652F27B24441B993" modified="2014-10-29" version="1">MKQIQMTANPSFSSISTKKIIQMNDVWTSYDSKNFALEGINMSIDRGTNYAIVGQSGSGKSTLLKLMNGMMIPSKGTIKIDYITPNMNNKKFKKMLNTIGYIPQNLGLVKNSSVLENILIGALPRLGKIQSLFKKFPENEIQEAKKIISQVGLSGKEERKAYMLSGGEKRRVAIARALMQHPTILLADEIVSELDHVTAREIMDLIADAQKRMNLTAIMVHHDMQLALEYANRVAVIKEGQKILEIGVEGDTIVDFQTGDMTTEEIMEMYSDDTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2V4</accession>
    <name>A0A087S2V4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00368</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20058">
        <property type="protein sequence ID" value="KFM20058"/>
        <property type="gene ID" value="AAA799P11_00368"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.357"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002831">
        <property type="entry name" value="Tscrpt_reg_TrmB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01978">
        <property type="entry name" value="TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TrmB" evidence="1">
        <location>
            <begin position="34"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="116" mass="13019" checksum="B9B96229482E3372" modified="2014-10-29" version="1">MSKPNIIQLSEFDITQKIIESLSNVCTRAVLFSVKNESKDATQIAEELKISLSTVYKTLSNLEDLALAEVDKYIISPEGKKIKQYRSRIGKVEITVDDLEPSLNLYPNTDNPKSSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Z5</accession>
    <name>A0A087S2Z5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional polymyxin resistance protein ArnA</fullName>
            <ecNumber evidence="2">2.1.2.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arnA</name>
        <name evidence="2" type="ORF">AAA799P11_00170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.9" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20099">
        <property type="protein sequence ID" value="KFM20099"/>
        <property type="gene ID" value="AAA799P11_00170"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.169"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004479">
        <property type="term" value="F:methionyl-tRNA formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Formyl_trans_N" evidence="1">
        <location>
            <begin position="19"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="195" mass="22414" checksum="AB9A6C8ABAD722E3" modified="2014-10-29" version="1">MKTVVCFVSRPHGFSIVDALVNSPKYKILKIFTHSLNPKSQDPTRSQRTDFQKFVQICQKNCIPLEKIDEKNQSISDVPQCDFIVEVSWRYLIGEEITNKANIVAFGIHRGKLPEYAGAQPIKQALENNEKNIVLSAHYLDSEIDQGTVIDSISHPVNYINTHTLDENIRRLRDEITELFPKLMFNVFKFFNNSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S310</accession>
    <name>A0A087S310_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Post-translational flagellin modification protein B</fullName>
            <ecNumber evidence="1">2.7.7.43</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ptmB</name>
        <name evidence="1" type="ORF">AAA799P11_00185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.43" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20114">
        <property type="protein sequence ID" value="KFM20114"/>
        <property type="gene ID" value="AAA799P11_00185"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.184"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008781">
        <property type="term" value="F:N-acylneuraminate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003329">
        <property type="entry name" value="Cytidylyl_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02348">
        <property type="entry name" value="CTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="244" mass="28034" checksum="EB699E544F0725AB" modified="2014-10-29" version="1">MNKNHLCVIPARSGSKGIPFKNIQKICGKPLIEYSINAAKESKLINRIIVSTDSKQIADIAKKLGAETPFMRPKKISGDFATQYDVAEHAVKFLLDHESYLPDTITILQPTTPIRTSKIIDKSITLLNKTKSTSVLSVSDVKDHPNIIFHEKNKYLKPFDRNFEKHSTRQSRTQLYAPTGSIYTFGYKTLKKYNSIYGPKIKALKIKEQEFNIDIDTIYDLFISEMTVLHWNKFKEKFNLKNNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S351</accession>
    <name>A0A087S351_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">tRNA-guanine transglycosylase protein</fullName>
            <ecNumber evidence="3">1.8.4.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tgtA</name>
        <name evidence="3" type="ORF">AAA799P11_00231</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.8" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20155">
        <property type="protein sequence ID" value="KFM20155"/>
        <property type="gene ID" value="AAA799P11_00231"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.225"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004604">
        <property type="term" value="F:phosphoadenylyl-sulfate reductase (thioredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.450.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036974">
        <property type="entry name" value="PUA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029402">
        <property type="entry name" value="TGT_C2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038250">
        <property type="entry name" value="TGT_C2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004521">
        <property type="entry name" value="Uncharacterised_CHP00451"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01472">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14810">
        <property type="entry name" value="TGT_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00451">
        <property type="entry name" value="unchar_dom_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="PUA" evidence="2">
        <location>
            <begin position="76"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="157" mass="17675" checksum="A8E7B238FCD0BE63" modified="2014-10-29" version="1">MDHILKLQSSIDSLFGNGVSKHLPKDVEMTFSRKTGRIRTVMHNGKLLCTLRIDGGLAISPYFAQMLMKSKTFRENCVEINKDAAPFVQEGRSVFCKHVVKCGKNVRISSDTPILFKNKVIAVGRAVLSYEMISDFDRGVAIKVRDSLKSRKEEKEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S361</accession>
    <name>A0A087S361_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">5-methylthioadenosine-S-adenosylhomocysteine deaminase protein</fullName>
            <ecNumber evidence="2">3.5.4.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mtaD</name>
        <name evidence="2" type="ORF">AAA799P11_00241</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20165">
        <property type="protein sequence ID" value="KFM20165"/>
        <property type="gene ID" value="AAA799P11_00241"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.235"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102480">
        <property type="term" value="F:5-fluorocytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004131">
        <property type="term" value="F:cytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="52"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="396" mass="43600" checksum="36C498E52B6F90D7" modified="2014-10-29" version="1">MLIKNVSLLLGKELDFISKTNVQIQNGKFKRIQPNINPSGKEDSIDCEGLLLIPGFINAHTHIGDSIGKDITLDSSVDKKIHPVFGAKSKILKNTPPENLSNFMKNTCHSMIRKGITTFVDFREGGLDGVILLKKTLSEIPIRSIILGRVDFYQNSAEIKKNLPIPKEKAQELPKIIQKCDGIGVSGANENSNSVLNHYSKTSKIRAIHSAETKQSTAKSKKMTGKSETLRALSLKPHFLVHMTHASKSDLHVAAKKIRGIVICPRANSSLAEGIPDITLMQKAGCVLALGTDNVMINSPDMFREMDYLWKVTMGIHKKRINPKEILKMSTVNGGKILKKDIGVIETKKIADCVFLNKHALDLEPMHEPYASIVHRASESAIQAVMIGGKIVHGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-04-07" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S362</accession>
    <name>A0A087S362_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">GTP cyclohydrolase III</fullName>
            <ecNumber evidence="1 2">3.5.4.29</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 4" type="primary">gch3</name>
        <name evidence="4" type="ORF">AAA799P11_00242</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">Catalyzes the formation of 2-amino-5-formylamino-6-ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 2">
            <text>GTP + 3 H2O = 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + 2 H(+) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:22468"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57258"/>
            <dbReference type="EC" id="3.5.4.29"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the archaeal-type GTP cyclohydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.29" evidence="1 2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20166">
        <property type="protein sequence ID" value="KFM20166"/>
        <property type="gene ID" value="AAA799P11_00242"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.236"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043740">
        <property type="term" value="F:GTP cyclohydrolase IIa activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00608">
        <property type="entry name" value="GTP_cyclohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007839">
        <property type="entry name" value="GTP_CycHdrlase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42202">
        <property type="entry name" value="PTHR42202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05165">
        <property type="entry name" value="GCH_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009265">
        <property type="entry name" value="GTP_cyclohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1 2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="127"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR009265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="250" mass="28394" checksum="66D09FC2C52DE1CC" modified="2014-10-29" version="1">MIQLSILKITGYGPWTLTLGSDREHELQMLQASLYKQLQQLFSEKNGLVFLNRSDEFFVVSNGIGLEDHIQIQKTLEKSFEVHLTISIGFAESPFEANLKAYEGKKNEIVLDKQHNIFGFVNDTDNPKVTIMHLDVDDLTSKRTTNSPYEISSIIFQLYSKMSKYFLEKNSLTFFMGGDNFMVVASDDAKNSVQNFINMIKNDDKIFLNCGIGNASTCRDAVKLATKSLDTIREIRDSGKEKPEVYELTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S367</accession>
    <name>A0A087S367_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00247</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20171">
        <property type="protein sequence ID" value="KFM20171"/>
        <property type="gene ID" value="AAA799P11_00247"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="47" mass="5610" checksum="B1BCB6D54867EA5B" modified="2014-10-29" version="1">MAKRVTIMIDDDIDKKLRLRQAKLIQQEQTSYSYSKVLNETIRKVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S370</accession>
    <name>A0A087S370_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Malyl-CoA thioesterase protein</fullName>
            <ecNumber evidence="4">4.1.3.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mcl2</name>
        <name evidence="4" type="ORF">AAA799P11_00250</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.6" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20174">
        <property type="protein sequence ID" value="KFM20174"/>
        <property type="gene ID" value="AAA799P11_00250"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.244"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005000">
        <property type="entry name" value="Aldolase/citrate-lyase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011206">
        <property type="entry name" value="Citrate_lyase_beta/mcl1/mcl2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03328">
        <property type="entry name" value="HpcH_HpaI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015582">
        <property type="entry name" value="Cit_lyase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HpcH_HpaI" evidence="3">
        <location>
            <begin position="6"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="284" mass="31419" checksum="A1577A5354C4A0B7" modified="2014-10-29" version="1">MTQLFRSLIFVPGNNPRFLEKAKKLQADIVCFDLEDSVPDNEKTNARKLIKSALKSRKSYESSIFVRTNSPLSGKIPSDLKEIVQKGIDGIVIPKVNNAKELKKIEKTIAGLEKKRKLKPTQLIPSIESAEGVVNTYQIASSSKRVVAVVFGVFDLLNDIGVEYTKDAEGAKYSRRKIPVDAQAAGVAAIDAIWQDLKDSKGLENDCKIGKSLGYSGKSIIHPDHISVTHKLFHPNKSEIEWAKKVCKTYLESTKKGKGATTVDGKMIDEVHFKQAKALLELVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F6</accession>
    <name>A0A087S3F6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00007</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20260">
        <property type="protein sequence ID" value="KFM20260"/>
        <property type="gene ID" value="AAA799P11_00007"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.7"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027560">
        <property type="entry name" value="PEFG-CTERM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04296">
        <property type="entry name" value="PEFG-CTERM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="256"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="118"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="284" mass="30317" checksum="5988B9968186A8C8" modified="2014-10-29" version="1">MVGMVFLIPAYADHPEVTIETTAGSGAPGCEETADGCYIPISATVNAGGVVIMSNTDTAAHTFTSGTPQDGPDGNFDTSLLMAGSSFEWSPDTAGEYPYFCMVHPWMIGNIIVQEVGTEESGEHEEETSEHGEVDEHEAELTTMIKGMSEDGSVNIDIMTTDPTSGEEMTIVVEFSKATGEEQKHMNYDIVVTQNGNEVLSEKEVHLMESNAKHTTNTLSSDDPVDVAITLLGIGMNEPYTGPVGEVVQFNVVPEFGTVAMIVLGVAITSVVILSTKSKIIPRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I5</accession>
    <name>A0A087S3I5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00036</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20289">
        <property type="protein sequence ID" value="KFM20289"/>
        <property type="gene ID" value="AAA799P11_00036"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.36"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="89"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="91"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="116" mass="13238" checksum="08EDE4C93DB9E355" modified="2014-10-29" version="1">MAISKENKDFIDSLIDYYISESESYTQIAENFVPEVESIPDTAFGIITGCVYSGFLQAYQNQQQTPSLEDMREFNEIIKNRAALIKKAIIEPNKEPSKETDKKDSDDSETEIKKDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3I6</accession>
    <name>A0A087S3I6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00037</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20290">
        <property type="protein sequence ID" value="KFM20290"/>
        <property type="gene ID" value="AAA799P11_00037"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="30" mass="3171" checksum="30F53834D27CDB96" modified="2014-10-29" version="1">MKVDGSKIIFLGGTASAVITAIVVLYFSIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J1</accession>
    <name>A0A087S3J1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alcohol dehydrogenase protein</fullName>
            <ecNumber evidence="4">1.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">adh</name>
        <name evidence="4" type="ORF">AAA799P11_00042</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20295">
        <property type="protein sequence ID" value="KFM20295"/>
        <property type="gene ID" value="AAA799P11_00042"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.40"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="3">
        <location>
            <begin position="13"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="344" mass="37628" checksum="859354BA3304FA6B" modified="2014-10-29" version="1">MKKMRAMVLEKCGAVETNPLKLTQIDRHEIKRPNEILLKIEACGVCHSQLHGIEGDWKDLGIPPQLPTVPGHEVVGKVVEIGQDVTKFKVGDRAGITPLLEACKECQYCKEGKEYLCESSIILGETLKGGYTEYVTVTEDFATKVPDSMKPEYAAPLFCAGITAYKAVKAAEPQTHKKIGVFGIGGVGHMAVQFAKVKDCEVIAFSRSQSHLDVAKRLGAIDAMQFSENQDEFLEKLKEKHGLLDAAIVFAPSDIVTDTAIKAIKKGGMVVIATIGKNPSFVAFEEKTIRGTLIGSTKDMEEVIKTCNEKNIEVVTEVFPLEDANKVLKKLKDSEIEARAVLIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J9</accession>
    <name>A0A087S3J9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20303">
        <property type="protein sequence ID" value="KFM20303"/>
        <property type="gene ID" value="AAA799P11_00050"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.49"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="8"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="76" mass="8842" checksum="63CF76B8CCB81235" modified="2014-10-29" version="1">MEKSYMLISCEIGQEQFLYSQLKEIPEVKNCLVTFGSYDVVAEFETDTQSQMNEVITTKIRKLKKIRSTITLRAMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L8</accession>
    <name>A0A087S3L8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00069</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20322">
        <property type="protein sequence ID" value="KFM20322"/>
        <property type="gene ID" value="AAA799P11_00069"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="113" mass="12558" checksum="6E1724C2DA225445" modified="2014-10-29" version="1">MPETLQKNKSELGLTFLVIILSGASASLLLLPPLGLIPYATFRDVAIIPSVIIIFAIGILSRSKFPRLSSRLFKGMARIYCVICTRSNSYSWLHVCKMDSNGQYDLSSRIVSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T6</accession>
    <name>A0A087S3T6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00137</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20390">
        <property type="protein sequence ID" value="KFM20390"/>
        <property type="gene ID" value="AAA799P11_00137"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="55" mass="6338" checksum="5905417AC431DEE6" modified="2014-10-29" version="1">MILDNSKLNVYVFEDAIVVKNNKDFTKQFPRCGITQIESFVLDMAKRGKLDDLLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RMU1</accession>
    <name>A0A087RMU1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000103">
        <property type="protein sequence ID" value="KFM14795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14795">
        <property type="protein sequence ID" value="KFM14795"/>
        <property type="gene ID" value="AAA799P11_01525"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11291" checksum="15714AE0A96F4248" modified="2014-10-29" version="1" fragment="single">RNDPKIDSVLGKDGKKYSISDALDKKIDWIQIDVGFLSEQEKDTVLDSCKYAVVSGSHTVMGEIMGGKAKPIIGIPIYDEHTNNIKWAEEKNLGILATKTKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNE3</accession>
    <name>A0A087RNE3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01519</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000097">
        <property type="protein sequence ID" value="KFM14997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14997">
        <property type="protein sequence ID" value="KFM14997"/>
        <property type="gene ID" value="AAA799P11_01519"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="6713" checksum="FB2E95A94EE9750A" modified="2014-10-29" version="1" fragment="single">LIDAVSLVITLTGIFFLRNKLAEAESDEPESDLTPNLKHQELGVHKVTKTNKILQTLKAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RP66</accession>
    <name>A0A087RP66_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative inorganic polyphosphate-ATP-NAD kinase protein</fullName>
            <ecNumber evidence="1">2.7.1.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ppnK</name>
        <name evidence="1" type="ORF">AAA799P11_01509</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.23" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000091">
        <property type="protein sequence ID" value="KFM15270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15270">
        <property type="protein sequence ID" value="KFM15270"/>
        <property type="gene ID" value="AAA799P11_01509"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1389"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003951">
        <property type="term" value="F:NAD+ kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019674">
        <property type="term" value="P:NAD metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017437">
        <property type="entry name" value="ATP-NAD_kinase_PpnK-typ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="SSF111331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="84" mass="9515" checksum="B5DA30423532D57B" modified="2014-10-29" version="1" fragment="single">PILHESLDVLIITPVAPVYRLESIVVPDEKIEIISSHDCNIVMDAQVVKTAGFEEPITIKKYKKPAVFIRLKKRGLRQMSKLGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQP4</accession>
    <name>A0A087RQP4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01474</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000072">
        <property type="protein sequence ID" value="KFM15798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15798">
        <property type="protein sequence ID" value="KFM15798"/>
        <property type="gene ID" value="AAA799P11_01474"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM15798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="31" mass="3316" checksum="E13454889F317497" modified="2014-10-29" version="1" fragment="single">NGYGSKYLTGLLTPEGVTFLASENSLELLNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RRT2</accession>
    <name>A0A087RRT2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cellulose synthase catalytic subunit UDP-forming protein</fullName>
            <ecNumber evidence="3">2.4.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bcsA</name>
        <name evidence="3" type="ORF">AAA799P11_01454</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.12" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000062">
        <property type="protein sequence ID" value="KFM16186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16186">
        <property type="protein sequence ID" value="KFM16186"/>
        <property type="gene ID" value="AAA799P11_01454"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="63"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="155" mass="17884" checksum="275E3BC8E50EFD45" modified="2014-10-29" version="1" fragment="single">MILRAREMSFNPFTQLVFDLFILSAIIITAYTCNFYYLAFLSKKRKDHLLTADLGTPSITIQLPIYNEKYVAKRLVDSVCNLDYPQDKMRIMVLDDSDDDTVDLLAETVNDYKKKGFKIEHVRRGTRKGYKAGALKYAMRSTDTELVAIFDADFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RS50</accession>
    <name>A0A087RS50_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01447</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000058">
        <property type="protein sequence ID" value="KFM16304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16304">
        <property type="protein sequence ID" value="KFM16304"/>
        <property type="gene ID" value="AAA799P11_01447"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="43" mass="4994" checksum="9C97AF3B60ACD3DA" modified="2014-10-29" version="1">MRGDRKGVHFAGFSWRQIVSDVHVVRQNLEQEQEEANQLANRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTJ4</accession>
    <name>A0A087RTJ4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA protection protein DPS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01412</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000043">
        <property type="protein sequence ID" value="KFM16798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16798">
        <property type="protein sequence ID" value="KFM16798"/>
        <property type="gene ID" value="AAA799P11_01412"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1339"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014490">
        <property type="entry name" value="Dps-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008331">
        <property type="entry name" value="Ferritin_DPS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00210">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018063">
        <property type="entry name" value="Ferrtn_UCP018063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ferritin" evidence="2">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="133"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM16798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="154" mass="17537" checksum="AB33AE78B37E1523" modified="2014-10-29" version="1" fragment="single">YYFTNLRSFCTGMEGEGIKGVIEDARLEDLSHFESCIDRIFQLGGEFPKDIVDFCKSAGADFLQSDKSTTLNEILEKCLKAEQGAIINWNKVCQMTHGKDPMTYDIAQSILAVEIEHESWFLELLDGRPSGHMRRRYSGERPHTSKHSRSLDSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTK9</accession>
    <name>A0A087RTK9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc finger UBP-type protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000042">
        <property type="protein sequence ID" value="KFM16813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16813">
        <property type="protein sequence ID" value="KFM16813"/>
        <property type="gene ID" value="AAA799P11_01405"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1333"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001607">
        <property type="entry name" value="Znf_UBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02148">
        <property type="entry name" value="zf-UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00290">
        <property type="entry name" value="ZnF_UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50271">
        <property type="entry name" value="ZF_UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBP-type" evidence="1">
        <location>
            <begin position="20"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="85" mass="9734" checksum="DDEC05D239E82313" modified="2014-10-29" version="1">MAKECSHFLEEKKGITPNTKSCEECEKEHLPVVAIRMCLTCGHVGCCDSSIGKHATKHFEETGHPVMKAIPGDIWKWCYHHKEYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTM0</accession>
    <name>A0A087RTM0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative thymidylate kinase protein</fullName>
            <ecNumber evidence="2">2.7.4.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tmk</name>
        <name evidence="2" type="ORF">AAA799P11_01402</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.9" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000041">
        <property type="protein sequence ID" value="KFM16824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16824">
        <property type="protein sequence ID" value="KFM16824"/>
        <property type="gene ID" value="AAA799P11_01402"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004798">
        <property type="term" value="F:thymidylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039430">
        <property type="entry name" value="Thymidylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02223">
        <property type="entry name" value="Thymidylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylate_kin" evidence="1">
        <location>
            <begin position="5"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="14927" checksum="B196DEB5398EA826" modified="2014-10-29" version="1" fragment="single">MIIVIEGGDQAGKLTQSTMLEKALKKRKIKTKLFHFPDYKTPIGKEIKKYLDGKRKFPPQVIHCLLSANRWEKLEQIKTAQQKNSVLIMNRYYHSNLVYGLANGMKEKWLESLDAGLPKADLVILLDVSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVB7</accession>
    <name>A0A087RVB7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Virginiamycin B lyase protein</fullName>
            <ecNumber evidence="8">3.1.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">AAA799P11_01347</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.17" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000033">
        <property type="protein sequence ID" value="KFM17421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17421">
        <property type="protein sequence ID" value="KFM17421"/>
        <property type="gene ID" value="AAA799P11_01347"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1285"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004341">
        <property type="term" value="F:gluconolactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006825">
        <property type="term" value="P:copper ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032694">
        <property type="entry name" value="CopC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008457">
        <property type="entry name" value="Cu-R_CopD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34820">
        <property type="entry name" value="PTHR34820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05425">
        <property type="entry name" value="CopD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="179"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="708"/>
            <end position="725"/>
        </location>
    </feature>
    <feature type="domain" description="CopD" evidence="7">
        <location>
            <begin position="143"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM17421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="740" mass="82496" checksum="2199C641A1CBE9B5" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVJ2</accession>
    <name>A0A087RVJ2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">7-carboxy-7-deazaguanine synthase</fullName>
            <shortName evidence="5">CDG synthase</shortName>
            <ecNumber evidence="5">4.3.99.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Archaeosine biosynthesis protein QueE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">queE</name>
        <name evidence="7" type="ORF">AAA799P11_01328</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>6-carboxy-5,6,7,8-tetrahydropterin + H(+) = 7-carboxy-7-deazaguanine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:27974"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:61032"/>
            <dbReference type="ChEBI" id="CHEBI:61036"/>
            <dbReference type="EC" id="4.3.99.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </cofactor>
        <text evidence="5">Binds 1 S-adenosyl-L-methionine per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.99.3" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000031">
        <property type="protein sequence ID" value="KFM17496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17496">
        <property type="protein sequence ID" value="KFM17496"/>
        <property type="gene ID" value="AAA799P11_01328"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1268"/>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016840">
        <property type="term" value="F:carbon-nitrogen lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904047">
        <property type="term" value="F:S-adenosyl-L-methionine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00917">
        <property type="entry name" value="QueE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024924">
        <property type="entry name" value="7-CO-7-deazaguanine_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="18"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="12"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="5">
        <location>
            <begin position="37"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="237" mass="26908" checksum="F792315DC845A5D4" modified="2014-10-29" version="1">MKVRLFEIFTSVEGEGILYGTKTFFVRLAGCPFTCFYCDTKESLPLDSGTEYSIEEANQLIDSNLQNQTYKVNFTGGDPLIQHQAVALLAKHIQDKKIPTYLESSCFDIDRFNHVLPFIDIVKIEFKTKDSDFVDSQHYEKLIGHTMKCLKSSVNAKKTTYIKVVVSSKTKPDDFKELVNQIFDIVSKDDVDGFIIQPTYGVAEPSLDLLLSLYDVVFPHYDEVKVVPQLHKFIGAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RVL8</accession>
    <name>A0A087RVL8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulatory protein AsnC</fullName>
            <ecNumber evidence="2">2.4.2.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01318</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.18" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000030">
        <property type="protein sequence ID" value="KFM17522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17522">
        <property type="protein sequence ID" value="KFM17522"/>
        <property type="gene ID" value="AAA799P11_01318"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1258"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004048">
        <property type="term" value="F:anthranilate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="6"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="79" mass="8664" checksum="2A5902FFE4F8C18B" modified="2014-10-29" version="1">MATAYVLINCELGSEEAVISELKSIEGVVEVHGTFGAYDILAKVESGQVEALRETITWKIRKIPKIRSTLTLMGIEGQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWQ9</accession>
    <name>A0A087RWQ9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thrombospondin type 3 repeat-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01301</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000028">
        <property type="protein sequence ID" value="KFM17913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17913">
        <property type="protein sequence ID" value="KFM17913"/>
        <property type="gene ID" value="AAA799P11_01301"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1241"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1080.10">
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003367">
        <property type="entry name" value="Thrombospondin_3-like_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028974">
        <property type="entry name" value="TSP_type-3_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02412">
        <property type="entry name" value="TSP_3"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103647">
        <property type="entry name" value="SSF103647"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="698"/>
            <end position="722"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="698"/>
            <end position="716"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM17913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="722" mass="79042" checksum="35A8D3422547DB8E" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWU2</accession>
    <name>A0A087RWU2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DEAD-DEAH box helicase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01299</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000027">
        <property type="protein sequence ID" value="KFM17946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17946">
        <property type="protein sequence ID" value="KFM17946"/>
        <property type="gene ID" value="AAA799P11_01299"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1239"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016818">
        <property type="term" value="F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013701">
        <property type="entry name" value="DEAD/DEAH_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08494">
        <property type="entry name" value="DEAD_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD_assoc" evidence="1">
        <location>
            <begin position="79"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM17946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="415" mass="47465" checksum="DC6731F9BA48916F" modified="2014-10-29" version="1" fragment="single">NIFVLKGSQWRILNVDEKSFTVNVEPFRGGGITVPYWEGENIPIDYKTARKVGNFRSKVSKGSLQLTNKTIEKLNFNEISDENNIVVESSRSQGSIVLHSCFGTKINSTLSTLLSSMLSSMLGSVVDSRSDGYRIVLSSRSRISEKLFLEVLKDDYDLFSMVTASLAGTHNVNWRTWCVAKKFGIVGRGAVYERKSARFLYERYSKTALVQEALRELFHDKYDLKNTDKILKEIHEDQIHVKWLEVDQFSKLAEPILDHTSKYYSSPANLDKGILDLVKARLDKTKHRLICARCGKWERVVETNEVKSILICPYCKGRQITATFYSDYDLSKIIRKKHDGKKLTSEEKHKVDRAWKVSSLVENFGKTAIIVMSGYGVGADTAARILRNMVDDEHLLKQIYEAERQYIVTRGFWDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWV5</accession>
    <name>A0A087RWV5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Lysyl oxidase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01267</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000026">
        <property type="protein sequence ID" value="KFM17959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17959">
        <property type="protein sequence ID" value="KFM17959"/>
        <property type="gene ID" value="AAA799P11_01267"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1215"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016641">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001695">
        <property type="entry name" value="Lysyl_oxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01186">
        <property type="entry name" value="Lysyl_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM17959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="292" mass="32441" checksum="AB8AFEB46DFC4974" modified="2014-10-29" version="1">MTYTKKIFRKATILPVLLAIGFMFTTPMLMDVAAAPGGNGNNNGVPDSALLPDIIPSIPKHLQVQNAQQTETLRFTNAWGNTGVGNLEFFPIIPGVDVVETETQDSLQRLYDENGNLVWAEVVSEFEFHAEHNHWHIADIGEFAVRESTPNGPGDIITLPDGETASSIKVGFCIIDVYKINGENSPTRDRVYWDCEVTEQGIQAGWMDQYHQSTEGNEVPITDLAPGEYYLTNEWNPANNFIDEDETNDLSWMKFELTRDSNRNAKIAEIEGYSPGCNPDAPGLCGEITRNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RWY8</accession>
    <name>A0A087RWY8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pyruvoyl-dependent arginine decarboxylase</fullName>
            <shortName evidence="6">PvlArgDC</shortName>
            <ecNumber evidence="6">4.1.1.19</ecNumber>
        </recommendedName>
        <component>
            <recommendedName>
                <fullName evidence="6">Pyruvoyl-dependent arginine decarboxylase subunit beta</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="6">Pyruvoyl-dependent arginine decarboxylase subunit alpha</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">pdaD</name>
        <name evidence="7" type="ORF">AAA799P11_01262</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>H(+) + L-arginine = agmatine + CO2</text>
            <dbReference type="Rhea" id="RHEA:17641"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:58145"/>
            <dbReference type="EC" id="4.1.1.19"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
        <text evidence="6">Binds 1 pyruvoyl group covalently per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the PdaD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.19" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000025">
        <property type="protein sequence ID" value="KFM17992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17992">
        <property type="protein sequence ID" value="KFM17992"/>
        <property type="gene ID" value="AAA799P11_01262"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1212"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008792">
        <property type="term" value="F:arginine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006527">
        <property type="term" value="P:arginine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01404">
        <property type="entry name" value="PvlArgDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016104">
        <property type="entry name" value="Pyr-dep_his/arg-deCO2ase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016105">
        <property type="entry name" value="Pyr-dep_his/arg-deCO2ase_sand"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002724">
        <property type="entry name" value="Pyruvoyl-dep_arg_deCO2ase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40438">
        <property type="entry name" value="PTHR40438"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01862">
        <property type="entry name" value="PvlArgDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005216">
        <property type="entry name" value="Pyruvoyl-dep_arg_deCO2ase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01170">
        <property type="entry name" value="Pyruvoyl-dependent_arginine_de"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56271">
        <property type="entry name" value="SSF56271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00286">
        <property type="entry name" value="TIGR00286"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="4 6 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 6" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="chain" id="PRO_5023211154" description="Pyruvoyl-dependent arginine decarboxylase subunit beta" evidence="6">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5023211155" description="Pyruvoyl-dependent arginine decarboxylase subunit alpha" evidence="6">
        <location>
            <begin position="44"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage (non-hydrolytic)" evidence="6">
        <location>
            <begin position="43"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="modified residue" description="Pyruvic acid (Ser)" evidence="6">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM17992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="183" mass="20458" checksum="79B41507E0A5FE69" modified="2014-10-29" version="1">MLDLVAKKLFLTKGKGVHEDRLTSFEYALRDAGIAGTNLVLISSIFPPKAKLIPRKEGLKQIKPGQILFTIYSKNQTNEPHRMCSASVGIAQPKDKTRYGYLSEYEAFGQSQVQAGDYAEDIAAQMLASSLGIPFDVDKNWDEKRQQWKISGEIYKTQNITQQTRGDKDGKWTTVFAAAVLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXH5</accession>
    <name>A0A087RXH5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01205</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18179">
        <property type="protein sequence ID" value="KFM18179"/>
        <property type="gene ID" value="AAA799P11_01205"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1162"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="543"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="287"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="470"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="566"/>
            <end position="618"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="305"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="618" mass="70421" checksum="A80392CB3C15E558" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXL4</accession>
    <name>A0A087RXL4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18218">
        <property type="protein sequence ID" value="KFM18218"/>
        <property type="gene ID" value="AAA799P11_01135"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="40" mass="4505" checksum="3DEFB0C2EF0294A9" modified="2014-10-29" version="1">MQTKLVSLEATYLAKVATDAALSVIKKKQFLQSKSRQHKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXN9</accession>
    <name>A0A087RXN9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18243">
        <property type="protein sequence ID" value="KFM18243"/>
        <property type="gene ID" value="AAA799P11_01165"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="50" mass="5680" checksum="3116A22774DFF7A9" modified="2014-10-29" version="1">MKRKTSKSKPRELTISTTELSRYGMGVMNKALKVVNTAKQGKITIRLEKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXS1</accession>
    <name>A0A087RXS1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional nuclease protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01197</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18275">
        <property type="protein sequence ID" value="KFM18275"/>
        <property type="gene ID" value="AAA799P11_01197"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1154"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004518">
        <property type="term" value="F:nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.690.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036104">
        <property type="entry name" value="BFN_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003729">
        <property type="entry name" value="Bi_nuclease_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02577">
        <property type="entry name" value="DUF151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103256">
        <property type="entry name" value="SSF103256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51658">
        <property type="entry name" value="BFN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BFN" evidence="1">
        <location>
            <begin position="14"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="147" mass="16656" checksum="4B52949DCFC6B524" modified="2014-10-29" version="1">MRIMDINQAQEPDYESVKIDYVGFVDPYAVEGMVVLKADNGKEFHMRAFSGEVAKHISSFGDDNGEEAAPSIYKMIEDICEENELILVKVKIYESGEVLRANLYFTGKKDLVLRNYRASDAMALAAYYNIPILVRKTLLKESMEAET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXS4</accession>
    <name>A0A087RXS4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18278">
        <property type="protein sequence ID" value="KFM18278"/>
        <property type="gene ID" value="AAA799P11_01200"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1157"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="87" mass="10625" checksum="E602840626CD829E" modified="2014-10-29" version="1">MDKCDRRVRAYKNGKTLDQCKELAESLNPGFKEHIDKNEKLLWSEILEQVDHDELIYKFTLKFLRRDGYDIGNWKRPHVQKFNHWFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXS5</accession>
    <name>A0A087RXS5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01201</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18279">
        <property type="protein sequence ID" value="KFM18279"/>
        <property type="gene ID" value="AAA799P11_01201"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="62" mass="7075" checksum="BF526B8AB87CE2D0" modified="2014-10-29" version="1" fragment="single">MGISSASEYVDFFINLNMGENVPLISFVNNEKLVLKQKLENKNIPKEPIRKGIEILEQLAKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXY7</accession>
    <name>A0A087RXY7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01116</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18341">
        <property type="protein sequence ID" value="KFM18341"/>
        <property type="gene ID" value="AAA799P11_01116"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1077"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="90" mass="10610" checksum="700500FFC9CD2938" modified="2014-10-29" version="1">MMLLVVGTISVPAFADENEYDDDRYDDDDTDTMMMTDTMMMTDTMMMTDTMMMTDTMMMTDTRDITMRFKVDNTRQLILKPYNTSKMMQC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY03</accession>
    <name>A0A087RY03_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1281_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01132</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18357">
        <property type="protein sequence ID" value="KFM18357"/>
        <property type="gene ID" value="AAA799P11_01132"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041329">
        <property type="entry name" value="YubB_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18406">
        <property type="entry name" value="DUF1281_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1281_C" evidence="1">
        <location>
            <begin position="76"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="180" mass="21048" checksum="5191B23B0442C5A4" modified="2014-10-29" version="1">MSNRCYNKIIVIGDEYVLDYLENIRLDFETIRPVPKELKSLKNNEKACDWMRANWGVYRWLDEMETERVSDTVLFAEINTAWRPPLELLEYTTSKFNVDVILDFEDPMVFAGIVSIRDGEIEEYRKEVTGYHQSVGDLNGRYETVEDLEKAVKEGNQRLKDIKDKTKPVKEISFPSGNII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY24</accession>
    <name>A0A087RY24_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Phosphoribosylformylglycinamidine cyclo-ligase</fullName>
            <ecNumber evidence="2 6">6.3.3.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">AIR synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">AIRS</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Phosphoribosyl-aminoimidazole synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">purM</name>
        <name evidence="9" type="ORF">AAA799P11_01091</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23032"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:137981"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.3.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AIR synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.3.1" evidence="2 6"/>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18378">
        <property type="protein sequence ID" value="KFM18378"/>
        <property type="gene ID" value="AAA799P11_01091"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1052"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00129"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004641">
        <property type="term" value="F:phosphoribosylformylglycinamidine cyclo-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02196">
        <property type="entry name" value="PurM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00741">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004733">
        <property type="entry name" value="PurM_cligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10520">
        <property type="entry name" value="PTHR10520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00878">
        <property type="entry name" value="purM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRS" evidence="7">
        <location>
            <begin position="58"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="8">
        <location>
            <begin position="175"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="340" mass="36642" checksum="F21FACF0BFB3F5E6" modified="2014-10-29" version="1">MVLTYKKAGVDISKIKQSQMAIGKLISSTHKLQKKAKIAHGFGHYAGIVEIPGGKLLATYTDGVGTKVVIANMMKKYNTIGIDCVAMNVNDIICIGATPISFVDYIAANKNDVQIFKKIVEGLVKGAKKSAMPIVGGETAIMPDVIEGKDFAFDLAGMVVGLVEKKQMVLGNKIKSGDVIIGANSTGIHSNGYSLARKALLKKYSVKDKVKGVGIIGDALLKPTEIYTKPVLEMVQKCKINGLAHITGGSFTKLLRLKKTGYEIDSLPKIPPIMGLIEEQGVKPEEMYKTFNMGVGFCVIAPKEQATKIKSIFKKHKISSQEIGQIISKKGVFVNSQKIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY38</accession>
    <name>A0A087RY38_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18392">
        <property type="protein sequence ID" value="KFM18392"/>
        <property type="gene ID" value="AAA799P11_01105"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1066"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="233"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="282"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="331"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="361"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="394"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="421" mass="46960" checksum="2D4D1516BD8854C8" modified="2014-10-29" version="1">MDSKLSHFSKTAGPGILFACTAIGVSHLVQSTRAGADYGLLILGFVIVVTLLKYPFFEYGSRYANSTQTSIIDGYKKLGTPALWLYFLITIASMFFVTGAVGFVTAGFFENLFELDFLGEWTIIILFAVCVGILSIGKYHVLDSLIKIIAIVLLVSTVSAFLLTLYNGPIEPIAGFEPKDLWDISGIFFLLALMGWMPTAVDLSSWNSLWTLERMKQTDYKPKLKETLFEFRLAYLVTGILAIMFVTLGAFIFYGSGDELPNNNALFANEIVSLYTKTIGDWSYVIIAASAFTVMFGTIIAVLDGYSRSLQRTIELIFTRKEEKIRKKFRMLYVIFLLVISTGSLTVIFQFGNNLKELVDFATVLSFVIAPIIAVFNFRLVTGKFLNKESQPSVILKILSFAGIIFLSGFAIFFLVLKFML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY46</accession>
    <name>A0A087RY46_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidyl-arginine deiminase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01113</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18400">
        <property type="protein sequence ID" value="KFM18400"/>
        <property type="gene ID" value="AAA799P11_01113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="335" mass="37697" checksum="F08E52989D957706" modified="2014-10-29" version="1">MKTSHFIIIGIIAVAISIPSISLAYNQEINLIMGMQTDDAPSVDKLELSDPICFVVDKSTSGEKGSAVTMDTCISLEAFEKMGCTKPMLEHLYKYSNLLDEESDGTWYLKFIGLPDGISQEKFDKCVDALLEKRPILNSGQSFPEPEQYESISENCGPGTEFEDGICVVNSENTDTATTKWGDAFNEKHPPPLKQVKFGIPLHEIQCNDERTLIWQKDTLKPACVFHESELIFERHWAKMRIGLPAEEITQEKLCLWYADEMPKYLAPYCAQDFVENELLCIDGRGMIVNEDCEIIGKYDPSTGLPIVENKEQCDMLDGSWDDKQNICDSKYGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY47</accession>
    <name>A0A087RY47_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF302 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01114</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18401">
        <property type="protein sequence ID" value="KFM18401"/>
        <property type="gene ID" value="AAA799P11_01114"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1075"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005180">
        <property type="entry name" value="DUF302"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035923">
        <property type="entry name" value="TT1751-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016796">
        <property type="entry name" value="UCP021774"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03625">
        <property type="entry name" value="DUF302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021774">
        <property type="entry name" value="UCP021774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103247">
        <property type="entry name" value="SSF103247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF302" evidence="1">
        <location>
            <begin position="35"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="128" mass="14244" checksum="3C5B6DA41655C923" modified="2014-10-29" version="1">MAFDYSVKTQKNIDDVISEITNKLSEIKFGVLGTLDFKEIFAKKGVDYPHQYKLLEVCNPQTAKQALDSDPTIGLLLPCTIAVYEKDGDNFISLAKPTELLSVSSNTELESMGKEIETKLIQVIDDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYG0</accession>
    <name>A0A087RYG0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01084</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18514">
        <property type="protein sequence ID" value="KFM18514"/>
        <property type="gene ID" value="AAA799P11_01084"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1046"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="167" mass="19298" checksum="23874CEB67FD6D45" modified="2014-10-29" version="1">MATKKKTTTKKKSVKKATAKPKTTKSKAAKPKSTTKSSTKRPEFEKAWREYNAALNGWKESLAQWQKATNETLMTYHDACQKAVESDAELLKKVSSSWESTWEEIGPEYIKQQTKMIENIFKETNIESIKKFNEQWEKFLKTSGDDSIIAYQEAIKRFNQAWQSGQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK3</accession>
    <name>A0A087RYK3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_01044</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18557">
        <property type="protein sequence ID" value="KFM18557"/>
        <property type="gene ID" value="AAA799P11_01044"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1006"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="26"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="247" mass="28158" checksum="E8F9CC6FA3E9F9F8" modified="2014-10-29" version="1">MSEDKTLPKDIDSDDSLPGRYEESNFEYQQPISPQETTPKSKSKSLAIGIIAFAIISAGFFSYYFMNQNEIDSQIVQNTLNMSPEQILANQYNIGKYGSDHAHAAMLVVLDGEQLNFGLPQFQLSSKYIHFEDHNPYLIHKHATGVPLDMLFVSIGLKITHDCIFVEYDFSKSVNEFCAEGKKTVQVYVNGEKFLSDISQYEIQHNDRILITLDEKSISKHLKYLDSFKIFDVPKKPLVNSEKDILI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYK6</accession>
    <name>A0A087RYK6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type II secretion system protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">outE</name>
        <name evidence="3" type="ORF">AAA799P11_01047</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18560">
        <property type="protein sequence ID" value="KFM18560"/>
        <property type="gene ID" value="AAA799P11_01047"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1009"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002716">
        <property type="entry name" value="PIN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00013">
        <property type="entry name" value="KH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00670">
        <property type="entry name" value="PINc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="SSF54791"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PINc" evidence="2">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="KH" evidence="1">
        <location>
            <begin position="480"/>
            <end position="566"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="605" mass="67379" checksum="CBB62018911419C4" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL2</accession>
    <name>A0A087RYL2_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Type-4 uracil-DNA glycosylase</fullName>
            <ecNumber evidence="3">3.2.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">AAA799P11_01053</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolyzes single-stranded DNA or mismatched double-stranded DNA and polynucleotides, releasing free uracil.</text>
            <dbReference type="EC" id="3.2.2.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.27" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18566">
        <property type="protein sequence ID" value="KFM18566"/>
        <property type="gene ID" value="AAA799P11_01053"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1015"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004844">
        <property type="term" value="F:uracil DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005273">
        <property type="entry name" value="Ura-DNA_glyco_family4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00986">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00758">
        <property type="entry name" value="UDG_fam4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="10" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="9">
        <location>
            <begin position="28"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="196" mass="21827" checksum="507E7C9373256EF6" modified="2014-10-29" version="1">MNQLETVKQDVIKCTKCDLCKTRTNSVPGKGNFQSDVIFVGEAPGRNEDKNGEPFVGVAGKKLSAALEEAGISREEVYITNVVKCRPPNNRVPNTKERDTCKEYLKKEISIIKPKIICVLGNTAFNSVLGGSEITKFRGKLVRKGSQLYFLTIHPAATIYNQELITTLNEDIAKLFDLIRELKNNKTVSIDIEYSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL8</accession>
    <name>A0A087RYL8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcription elongation factor NusA protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01059</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18572">
        <property type="protein sequence ID" value="KFM18572"/>
        <property type="gene ID" value="AAA799P11_01059"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1021"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="172" mass="19514" checksum="B53B44C88F9FF22A" modified="2014-10-29" version="1">MKLPICGFDAKNAILCPQCESKVESGELTQADVDASTVLAKVAKSNSEIENFTLYSCKEFQGNFVLYLAKNDIMIIRQSRTLYRLLQDQFKGKIWLVEADETDKKFIEDLFFPTKILSINSVWAPGGVQKTKAVVSGKWTPKFPIDTEKVIEIVKNARNLDIEIEFEDKGRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYM0</accession>
    <name>A0A087RYM0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01061</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18574">
        <property type="protein sequence ID" value="KFM18574"/>
        <property type="gene ID" value="AAA799P11_01061"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1023"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="81" mass="9254" checksum="3D1936A0D411D5D1" modified="2014-10-29" version="1">MIEQEDAKKVIEVIGNNLIGVSHDSSSFQKLPDSFWGYFARGHDKKGNFGVIVTYSEDGKDVDELIKMYEEWAEKNKPKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ22</accession>
    <name>A0A087RZ22_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glyoxalase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01016</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18726">
        <property type="protein sequence ID" value="KFM18726"/>
        <property type="gene ID" value="AAA799P11_01016"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.982"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="130" mass="14776" checksum="2726DA07A9C684E0" modified="2014-10-29" version="1">MTRNLEKIMPRVSHFDIPSDNPERAQKFYKEVFDWKFEKWDGPMDYWMITTGSEDEPGINGGLSKRIPGQIGITNTITVASIDEFSKKIIEKGGQVIVPKMAIPKVGWFAQCTDTEMNAFGIIEMDDKAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ28</accession>
    <name>A0A087RZ28_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-containing ferredoxin-2 protein</fullName>
            <ecNumber evidence="2">1.2.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">zfx2</name>
        <name evidence="2" type="ORF">AAA799P11_01022</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18732">
        <property type="protein sequence ID" value="KFM18732"/>
        <property type="gene ID" value="AAA799P11_01022"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.988"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13237">
        <property type="entry name" value="Fer4_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="62"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="122"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="163" mass="17758" checksum="C8C8DB39EC1AFF89" modified="2014-10-29" version="1">MPIAENFPEGLKPLGKISDGEGHFHIMWGPGRSDAEAFSDAEVKAAYEARGEEQVPLGVSGTMVAVDWDSCVADGACIEACPVQVFQWYRTEKDIPAKDVVGQTFEGTGSSVKDERKDMTDKADPIREHDCIWCMACVSVCPPQAIKVDQSNVEKHENAAKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ74</accession>
    <name>A0A087RZ74_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator TrmB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00987</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transcriptional regulator TrmB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_048071334.1">
        <property type="nucleotide sequence ID" value="NZ_CP035425.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18778">
        <property type="protein sequence ID" value="KFM18778"/>
        <property type="gene ID" value="AAA799P11_00987"/>
    </dbReference>
    <dbReference type="GeneID" id="40721710"/>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.953"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021586">
        <property type="entry name" value="Tscrpt_reg_TrmB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002831">
        <property type="entry name" value="Tscrpt_reg_TrmB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11495">
        <property type="entry name" value="Regulator_TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01978">
        <property type="entry name" value="TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TrmB" evidence="2">
        <location>
            <begin position="11"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Regulator_TrmB" evidence="3">
        <location>
            <begin position="118"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="255" mass="28083" checksum="91C90AFA497ACB29" modified="2014-10-29" version="1">MSISDKTRKALEKIGLTSYEIRTFSALLKSGELTASELSQKSGVPYSKIYEVLGTLEEKGWIGTDDSRPTKYFAKSPSTGLETTKQKMENDFSENQSVILNELVPLYEKSGTSEKPDIWVLSGAINIAAKILEMVETCRNEVMIALPEAGEELVKQALPKLRSLHDKGVEITILTSDKMDKEYIKAIKRVATVKIKKGLFGGGIISDKKYVVILLGPAVAAENSSDVVAIWADHAGLAGFARQYFEYLLKDSKKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ96</accession>
    <name>A0A087RZ96_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01009</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18800">
        <property type="protein sequence ID" value="KFM18800"/>
        <property type="gene ID" value="AAA799P11_01009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="363" mass="43049" checksum="EA0D9162BB079E33" modified="2014-10-29" version="1" fragment="single">LFFILCPKDTIQMDHAVDSDLQICEILMISRKPLDKRILIILLVIIAVSITIFVQYTFQSNIEIFQTVSDREKLKEKNTIVAYHMLFKKIEYLQPNIETKENRLPENLIIKVGNYTFERQSFELKEEGLYRFSLVGERNEQRIVYQENLDALLSGIAWIYSHGNSDNGKSTEEITKKSTKTKIFATCGGISNWIIEILNEKEVKSRVVSTLTLDKWNNYDNGHTMIEVYDEKLKKWVLYDLDNNRFFIHNNTRLSLLEFVDAVKENRYEFGYLSNDIELDISNFSSKSYDYSFVMEPMHSDEELLKKWYERVIQVPLIKEGEKNYFFDSENKELISKYSHRYQYLDENEFLAKFYPDSHSFNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG8</accession>
    <name>A0A087RZG8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA repair protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00903</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in DNA damage repair.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the Nre family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18872">
        <property type="protein sequence ID" value="KFM18872"/>
        <property type="gene ID" value="AAA799P11_00903"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.865"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02096">
        <property type="entry name" value="Nre"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033167">
        <property type="entry name" value="Nre"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006979">
        <property type="entry name" value="Nre_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006978">
        <property type="entry name" value="Nre_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38136">
        <property type="entry name" value="PTHR38136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04895">
        <property type="entry name" value="Nre_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04894">
        <property type="entry name" value="Nre_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nre_N" evidence="2">
        <location>
            <begin position="11"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="Nre_C" evidence="3">
        <location>
            <begin position="277"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="385" mass="43106" checksum="7E82B11377EAF661" modified="2014-10-29" version="1">MSSDSQDIRRSILTKWHETLSKYGNLFSSDSISGTSPPSVFVGSYNYPKVFVGPMVPPIHGDTSLLDSPEKWKGKSLEDIVNFRLNLVRGTQKLSIDKTDGRYIENLQEVTMSSKPTDSDLIFQKSVSSNISLDGESAPFGPVGEIKSAKFSGTSSVKSIEKAYYDKDLKAEDAVMNLYNSGIDISKIQKCFSIGMFGQKRKLVPTKWSITATDDIISKSLVDEVLDYELIDSCKIFSYEHLGNHFSIVLFPHRWIYEMVEAWYSNGVLGFGSDFEDARGIDHPPAIAGAYFAAKLGVLEYLNEKKIQSGVVILREIRPEYAIPVGVWQVREGIREAMKQPPVIANDFEHALNLASEKMSISKNEWLSHGNISKLIRQKTLSDFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH3</accession>
    <name>A0A087RZH3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00908</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18877">
        <property type="protein sequence ID" value="KFM18877"/>
        <property type="gene ID" value="AAA799P11_00908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="148" mass="17165" checksum="9442BCB143C217D7" modified="2014-10-29" version="1">MKQFTLERFSKLSQPDIFQISTDVENFHNIMPDYFKSLDVLEENKYGMIVNEKIHFLGIPTQIKTKHIIIHPNIHGIHILTGPLKGTSFIESYVEKDNGTMITIDVTLHFNNFFKLFPFLQNLVVKKMSKTMDEFVHCAEKSCPMISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH4</accession>
    <name>A0A087RZH4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00909</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18878">
        <property type="protein sequence ID" value="KFM18878"/>
        <property type="gene ID" value="AAA799P11_00909"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="119" mass="13764" checksum="AF6C06092C95F5AA" modified="2014-10-29" version="1">MPHIVFENKIDLNDFLQKFSPIFQRDSALIKIQTIFVDKDNFTALLPTVVIDENHQEFLIELSTRKEKTTIRLYPNTDPEKTDGVKIAMALLAKQIMNTYPDFKITKTNLSNYLEMVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZJ1</accession>
    <name>A0A087RZJ1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AbrB family transcriptional regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00926</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18895">
        <property type="protein sequence ID" value="KFM18895"/>
        <property type="gene ID" value="AAA799P11_00926"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.889"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="1">
        <location>
            <begin position="94"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="141" mass="15774" checksum="CF0735A0E546531D" modified="2014-10-29" version="1">MTGNENQYDPTTMFKDWIQKSGRAQAEFMKNFGALMTNQTSKTFNPLDTLKEVSDNTRQAQSSMMENMSSMQNKSMDTMFSIGQMLPSFMNWGAYKTTISSNGRISIPEAERNALGLGEGDLVQVIVLPIAKKSKAREVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZL2</accession>
    <name>A0A087RZL2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal cation transporter protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00857</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18916">
        <property type="protein sequence ID" value="KFM18916"/>
        <property type="gene ID" value="AAA799P11_00857"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="33" mass="3345" checksum="B0523E44A204B082" modified="2014-10-29" version="1" fragment="single">GIGLHNFGEGLAIGAAVGMGSGIYRIKSRKKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR7</accession>
    <name>A0A087RZR7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator TrmB protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00823</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18971">
        <property type="protein sequence ID" value="KFM18971"/>
        <property type="gene ID" value="AAA799P11_00823"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.787"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="71"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="171" mass="20045" checksum="62DE3F5805CDFC4E" modified="2014-10-29" version="1">MPEILDSPQKQILEFIINNPSTHLRKIKNNVGFSMGTIQYHLNILEKEGKIKSVKTKFYKNYYHIPESDEKVLSVFNLESPRSIILYLLQHEPSTHQEIAKGIELSSSTVSWHMKRLLDLDIVDYEYSGKYTLYRLTNRENVLENLRKCKSTVWNSMVNNMVDAFSAFEQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS0</accession>
    <name>A0A087RZS0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00826</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18974">
        <property type="protein sequence ID" value="KFM18974"/>
        <property type="gene ID" value="AAA799P11_00826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="54"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="209" mass="24181" checksum="8B63E2C57A3FD9A7" modified="2014-10-29" version="1">MTKTKTNYAVYGTILGIMLLSTTSIDSTTFQVFAQTTNEFTVRDSEQINKDPVAKSILEKIEQMKKRMAEIKEERKRQQEHQKFIEQQRELARQELNKELDRINDKYKDNTPKASFSSFVASKPAQTQLVYWDMFNFQQEKVADARKAMKSVLDNGGSLQEARNAYHEAASVKRIQLIDITKNLNIKHGLAEDSVQSTFDKYGKLPRYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZV0</accession>
    <name>A0A087RZV0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM19004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19004">
        <property type="protein sequence ID" value="KFM19004"/>
        <property type="gene ID" value="AAA799P11_00856"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="43" mass="4904" checksum="A26BB31A4A9A5719" modified="2014-10-29" version="1" fragment="single">MSDNRKSKDAEDILSEFDSRNKSQSEPHPEPEPEPEPEPEPTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S0M8</accession>
    <name>A0A087S0M8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Probable endonuclease 4</fullName>
            <ecNumber evidence="7">3.1.21.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Endodeoxyribonuclease IV</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Endonuclease IV</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nfo</name>
        <name evidence="9" type="ORF">AAA799P11_00805</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>Endonucleolytic cleavage to 5'-phosphooligonucleotide end-products.</text>
            <dbReference type="EC" id="3.1.21.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 3 Zn(2+) ions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the AP endonuclease 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.2" evidence="7"/>
    <dbReference type="EMBL" id="JOSZ01000009">
        <property type="protein sequence ID" value="KFM19282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19282">
        <property type="protein sequence ID" value="KFM19282"/>
        <property type="gene ID" value="AAA799P11_00805"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.772"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008833">
        <property type="term" value="F:deoxyribonuclease IV (phage-T4-induced) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00019">
        <property type="entry name" value="AP2Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00152">
        <property type="entry name" value="Nfo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001719">
        <property type="entry name" value="AP_endonuc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018246">
        <property type="entry name" value="AP_endonuc_F2_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21445">
        <property type="entry name" value="PTHR21445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00518">
        <property type="entry name" value="AP2Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00587">
        <property type="entry name" value="nfo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00731">
        <property type="entry name" value="AP_NUCLEASE_F2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51432">
        <property type="entry name" value="AP_NUCLEASE_F2_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7 9" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="8">
        <location>
            <begin position="18"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="227"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM19282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="279" mass="30872" checksum="221C4645AB851F7E" modified="2014-10-29" version="1">MQIGCHVSISGSIDKAVDNAVERECSAFQIFTRNPRGWHAKPLTKEDISNFKSKLKESEIDRFATCAHMPYLPNLATPKEDGFEKSVKTLVDEVERCAQLGIPYLVTHLGSHLGTGEEAGIERLVKGLTQAGKTKNDVMILLENTAGQKNSVGSDFKQLGEIFKQLKPAKKFGVCIDSCHAFVSGYDLRTEAKVKETFAEFDKYVGMGNLKILHLNDAKGDIGCNLDRHYHLGMGGIGEKGISAIVKFANKKKIPIILETPIDDDRDDFENIRKAKEFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S121</accession>
    <name>A0A087S121_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF45 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00749</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19425">
        <property type="protein sequence ID" value="KFM19425"/>
        <property type="gene ID" value="AAA799P11_00749"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002725">
        <property type="entry name" value="YgjP-like_metallopeptidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01863">
        <property type="entry name" value="DUF45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF45" evidence="1">
        <location>
            <begin position="23"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="233" mass="27182" checksum="4C48F0F21CC198B0" modified="2014-10-29" version="1">MYNFKYGNTTIPYDIIKSGRIKTSQITIDKNGIIVRIPNTKSIQETKLMILSKAQWIFKKRLHYKNQIPQIPQITFKKYSTIPFKGKNYPFEVISGGSVGVKLLKNTIQFHITQKRHTIPQLQKMYQEWLVKKAQIYLPKIITKNHFIAGKPHHITIKSLKGRWGSTTKTGEIILNANLLKAPSKVIEYVIIHELCHLKIKEHNQKFWNLVSKHSPKYQEHTKWLEVNGISIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1A8</accession>
    <name>A0A087S1A8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-hydroxybutyryl-CoA dehydrogenase protein</fullName>
            <ecNumber evidence="3">4.2.1.55</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hbd</name>
        <name evidence="3" type="ORF">AAA799P11_00713</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.55" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19512">
        <property type="protein sequence ID" value="KFM19512"/>
        <property type="gene ID" value="AAA799P11_00713"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.683"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003859">
        <property type="term" value="F:3-hydroxybutyryl-CoA dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="2">
        <location>
            <begin position="5"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="1">
        <location>
            <begin position="188"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="1">
        <location>
            <begin position="306"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="379" mass="42345" checksum="B3EDEE7FC1BE940D" modified="2014-10-29" version="1">MTIKNITVLGSGVMGHGIAQVSATAGYNIVLRDIEQGFLDKAMEKIRWSLDKLVSKEKISKEEGDAIFGRIKPVVDLKEAVKDAELVIEVVPEIMDLKKKVYAELDEVAAPEVIFASNTSTLPITEIANTTSRPDKFIGIHFFNPPQLMKLVEVIPGEKTSKEITEITKDYVKSVNKQAVLCRKDVPGFIINRLFIPMVHEACFVKDRTGATLEEIDSAVKFKLGFPMGIFELADFTGMDVIHKATVEMHLRDKKVINPHPLVEKMFDEKKLGQKSGEGYYKYSDDKYERVALSEELAEKCNPIQLVANILNNAAWLVTNGASDIDEIEKAAQLGLGLRKPLFETAKEIGIKNIVDELNKLAEEYGEFYKPDPLLVSMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1B8</accession>
    <name>A0A087S1B8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 13">DNA ligase</fullName>
            <ecNumber evidence="13">6.5.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Polydeoxyribonucleotide synthase [ATP]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 16" type="primary">lig</name>
        <name evidence="16" type="ORF">AAA799P11_00723</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="13 14">Belongs to the ATP-dependent DNA ligase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.1" evidence="13"/>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19522">
        <property type="protein sequence ID" value="KFM19522"/>
        <property type="gene ID" value="AAA799P11_00723"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.695"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003910">
        <property type="term" value="F:DNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071897">
        <property type="term" value="P:DNA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00407">
        <property type="entry name" value="DNA_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022865">
        <property type="entry name" value="DNA_ligae_ATP-dep_bac/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000977">
        <property type="entry name" value="DNA_ligase_ATP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012309">
        <property type="entry name" value="DNA_ligase_ATP-dep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012310">
        <property type="entry name" value="DNA_ligase_ATP-dep_cent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016059">
        <property type="entry name" value="DNA_ligase_ATP-dep_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012308">
        <property type="entry name" value="DNA_ligase_ATP-dep_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036599">
        <property type="entry name" value="DNA_ligase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04679">
        <property type="entry name" value="DNA_ligase_A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01068">
        <property type="entry name" value="DNA_ligase_A_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04675">
        <property type="entry name" value="DNA_ligase_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117018">
        <property type="entry name" value="SSF117018"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00574">
        <property type="entry name" value="dnl1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00697">
        <property type="entry name" value="DNA_LIGASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00333">
        <property type="entry name" value="DNA_LIGASE_A2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50160">
        <property type="entry name" value="DNA_LIGASE_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12 13" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 13" id="KW-0132">Cell division</keyword>
    <keyword evidence="7 13" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 13" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="11 13" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 13" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 13 16" id="KW-0436">Ligase</keyword>
    <keyword evidence="9 13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_LIGASE_A3" evidence="15">
        <location>
            <begin position="330"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="active site" description="N6-AMP-lysine intermediate" evidence="13">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="250"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="272"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="302"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="342"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="417"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="423"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU004196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="KFM19522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="588" mass="66718" checksum="E2DBCCC3EA559834" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C2</accession>
    <name>A0A087S1C2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00727</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19526">
        <property type="protein sequence ID" value="KFM19526"/>
        <property type="gene ID" value="AAA799P11_00727"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.699"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="78" mass="9021" checksum="8566F40D735BE144" modified="2014-10-29" version="1">MHDTEPDTFVYQTWPEKFSNMLKEIGVDSESKEIGTDDVEQGDYYSRYFAHTARMITNRGCLDVKNSNIDVIQIIQKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1C7</accession>
    <name>A0A087S1C7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative cobalt transporter subunit protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00732</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000007">
        <property type="protein sequence ID" value="KFM19531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19531">
        <property type="protein sequence ID" value="KFM19531"/>
        <property type="gene ID" value="AAA799P11_00732"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.705"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012666">
        <property type="entry name" value="CbtA_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09490">
        <property type="entry name" value="CbtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="244" mass="26565" checksum="DFB99E1245CEE8F1" modified="2014-10-29" version="1">MKTTLFLAIVLVSGALAGTVHGIANLAIVEPYLDEAIGIENQNLFASGDEEDTPQFWVEYNSYRDWQKGGQVLAGAILGTSVGALFGIVYALSRNSLPGKNDLRKTLVLAGIMWLTIYFIPFLKYPANPPTVGDGETVVLRAILYLSFIAISGFGAVGFYQLYKRLKQNTKILAFAGYAVFIGIAFALMPPNPDEVTAPMDLVNGFRAMSVVAVSVFWVSVSVILGSFWHKFKPDSEITLAKNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F1</accession>
    <name>A0A087S1F1_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">L-ectoine synthase</fullName>
            <ecNumber evidence="4">4.2.1.108</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">N-acetyldiaminobutyrate dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ectC</name>
        <name evidence="7" type="ORF">AAA799P11_00544</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2S)-4-acetamido-2-aminobutanoate = H2O + L-ectoine</text>
            <dbReference type="Rhea" id="RHEA:17281"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58515"/>
            <dbReference type="ChEBI" id="CHEBI:58929"/>
            <dbReference type="EC" id="4.2.1.108"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amine and polyamine biosynthesis; ectoine biosynthesis; L-ectoine from L-aspartate 4-semialdehyde: step 3/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ectoine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.108" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19555">
        <property type="protein sequence ID" value="KFM19555"/>
        <property type="gene ID" value="AAA799P11_00544"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.528"/>
    <dbReference type="UniPathway" id="UPA00067">
        <property type="reaction ID" value="UER00123"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033990">
        <property type="term" value="F:ectoine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019491">
        <property type="term" value="P:ectoine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06978">
        <property type="entry name" value="cupin_EctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01255">
        <property type="entry name" value="Ectoine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010462">
        <property type="entry name" value="Ectoine_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39289">
        <property type="entry name" value="PTHR39289"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06339">
        <property type="entry name" value="Ectoine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00033271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM19555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="15022" checksum="3624194B3473A1CC" modified="2014-10-29" version="1">MIVRNINSLCGTDREVNSDNWSSTRLLLKDDGMGFSFHQTIVHPGTETKIWYKNHLEAVYCVEGSGEIEEDDGTKHNISPGTIYALDKHDKHTLRAFSELKMICVFNPPLLGPETHDSQGVYPLLTEFENVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1F9</accession>
    <name>A0A087S1F9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00552</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19563">
        <property type="protein sequence ID" value="KFM19563"/>
        <property type="gene ID" value="AAA799P11_00552"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="52" mass="5896" checksum="7CFCE062A2A88CFA" modified="2014-10-29" version="1">MIQSWKLNTDAVCEEPTRLFCHTCGIEAEKIAHPACLVIDLNKLVVESLRQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1H4</accession>
    <name>A0A087S1H4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00567</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19578">
        <property type="protein sequence ID" value="KFM19578"/>
        <property type="gene ID" value="AAA799P11_00567"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.551"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd13946">
        <property type="entry name" value="LysW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005906">
        <property type="entry name" value="LysW"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40393">
        <property type="entry name" value="PTHR40393"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="55" mass="5781" checksum="80348DE4268D12AC" modified="2014-10-29" version="1">MSKCEECDADISIPSDALEGEIVTCPECGASFELAKGSDGFDLKPAQTVGEDWGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1I9</accession>
    <name>A0A087S1I9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA ligase ADP-forming subunit alpha protein</fullName>
            <ecNumber evidence="3">6.2.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sucD</name>
        <name evidence="3" type="ORF">AAA799P11_00582</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.13" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19593">
        <property type="protein sequence ID" value="KFM19593"/>
        <property type="gene ID" value="AAA799P11_00582"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.566"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043758">
        <property type="term" value="F:acetate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032875">
        <property type="entry name" value="Succ_CoA_lig_flav_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13607">
        <property type="entry name" value="Succ_CoA_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="25"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="705" mass="76368" checksum="6CD10A87309293CC" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K5</accession>
    <name>A0A087S1K5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00598</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19609">
        <property type="protein sequence ID" value="KFM19609"/>
        <property type="gene ID" value="AAA799P11_00598"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11642" checksum="D6F22A67D20FAFCD" modified="2014-10-29" version="1">MSNLLQCLTRKKTITSEESRYHKCKPIIRKHRIIQASSFSVVEDDDGTTNVMINGFDNVGYVFEIKEPNIVPIELSTYSDQPIFDSQNNQPQNGQNPKTILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1K8</accession>
    <name>A0A087S1K8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transposase protein</fullName>
            <ecNumber evidence="5">2.1.1.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_00601</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the transposition of the insertion sequence.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.37" evidence="5"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19612">
        <property type="protein sequence ID" value="KFM19612"/>
        <property type="gene ID" value="AAA799P11_00601"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003886">
        <property type="term" value="F:DNA (cytosine-5-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032874">
        <property type="entry name" value="DDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036280">
        <property type="entry name" value="Multihaem_cyt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13610">
        <property type="entry name" value="DDE_Tnp_IS240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48695">
        <property type="entry name" value="SSF48695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="3">
        <location>
            <begin position="28"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="Integrase catalytic" evidence="4">
        <location>
            <begin position="191"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="372" mass="43997" checksum="77701CAF0DB7D57F" modified="2014-10-29" version="1">MTQEKQRQEKGKQIALKSDLIRISDYHYQVHSQTTNRDYHVIKTDEVWHCDCPDHRFRKVCCKHIHAIEFSLKIREEVRERNKVTIEPVSVDSCRFCHSKNIKKYGIRRNKHTAIQRFSCSDCHKTFSMNIGFEKMKHNPKGITTAMQLYFSGESLRNVAKSLRLLGMDVTHQTVYNWINKYTKLMNQYLDKITPQVGDAWRADEVYVKIRGELKYVFAMMDDETRFWIAQEVADRKEGHDARGLLQKSKQVTQTKPKVFITDGLGSYHEAYKKEFWTLKRRNRTLHIRHIHLQGDMNNNKMERLNGEIRDREKVMRGIKKKDSVTLTDYQLFHNYIRPHSALGNMTPSEKCGMEIKGDNKWITLIQNASKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L2</accession>
    <name>A0A087S1L2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">30S ribosomal protein S30</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00605</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19616">
        <property type="protein sequence ID" value="KFM19616"/>
        <property type="gene ID" value="AAA799P11_00605"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.592"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006846">
        <property type="entry name" value="Ribosomal_S30"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04758">
        <property type="entry name" value="Ribosomal_S30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="23"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="60" mass="6749" checksum="73B44B10EC257DC1" modified="2014-10-29" version="1">MATHGSLTKAGKVRGQTPKVEGRKIVGTNSSLRNKSNFKKRFVLGRFPGQNKPGQRRKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L8</accession>
    <name>A0A087S1L8_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase</fullName>
            <ecNumber evidence="4">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">flpA</name>
        <name evidence="5" type="ORF">AAA799P11_00611</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Interacts with nop5. Component of box C/D small ribonucleoprotein (sRNP) particles that contain rpl7ae, FlpA and nop5, plus a guide RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the methyltransferase superfamily. Fibrillarin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19622">
        <property type="protein sequence ID" value="KFM19622"/>
        <property type="gene ID" value="AAA799P11_00611"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.598"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00351">
        <property type="entry name" value="RNA_methyltransf_FlpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000692">
        <property type="entry name" value="Fibrillarin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01269">
        <property type="entry name" value="Fibrillarin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006540">
        <property type="entry name" value="Nop17p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00052">
        <property type="entry name" value="FIBRILLARIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM01206">
        <property type="entry name" value="Fibrillarin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="2 4 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0819">tRNA processing</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="4">
        <location>
            <begin position="81"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="4">
        <location>
            <begin position="100"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="4">
        <location>
            <begin position="126"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="4">
        <location>
            <begin position="146"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="224" mass="25624" checksum="F4C0E722075C0906" modified="2014-10-29" version="1">MEEDNPSFFWIKSEGQQKLATENLVPGNQVYKEKLIVKKGIEYRLWDPFRSKLAAAIMNELEIFPFENKTKVLYLGASTGTTVSHISDIVGPSGIIFAVEHASRVARDFLDRVAAYRKNIMPILQDARKPKEYFSVFGKVDVVYVDIAQPDQTEIAIDNCEMFLKKGGYFFLVIKTRSIDVTKSPKKIVEEETQKLKSRFDIIQSIDLHPYDKDHAIVIAKFRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1M9</accession>
    <name>A0A087S1M9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00622</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19633">
        <property type="protein sequence ID" value="KFM19633"/>
        <property type="gene ID" value="AAA799P11_00622"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.608"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="94" mass="10465" checksum="3DE24209FA930753" modified="2014-10-29" version="1">MELKVHINDIHGSQMAAKINGKFTLDDNEFRFTAIAFGRIGGQNVGAKLSKDTEKELKKLGYDVDEVIMALQRNLLQGNLSLPEGLKKESFVDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1N5</accession>
    <name>A0A087S1N5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Type 2 DNA topoisomerase 6 subunit B</fullName>
            <ecNumber evidence="3">5.6.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Type II DNA topoisomerase VI subunit B</fullName>
            <shortName evidence="3">TopoVI-B</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">top6B</name>
        <name evidence="5" type="ORF">AAA799P11_00628</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Relaxes both positive and negative superturns and exhibits a strong decatenase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer. Heterotetramer of two Top6A and two Top6B chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the TOP6B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19639">
        <property type="protein sequence ID" value="KFM19639"/>
        <property type="gene ID" value="AAA799P11_00628"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.614"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006268">
        <property type="term" value="P:DNA unwinding involved in DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00823">
        <property type="entry name" value="TopoIIB_Trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00322">
        <property type="entry name" value="Top6B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005734">
        <property type="entry name" value="TopoVI_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015320">
        <property type="entry name" value="TopoVI_B_transducer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871:SF4">
        <property type="entry name" value="PTHR10871:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09239">
        <property type="entry name" value="Topo-VIb_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2 3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="HATPase_c" evidence="4">
        <location>
            <begin position="28"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="101"/>
            <end position="102"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="532"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM19639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="627" mass="70852" checksum="DE740B13948FC8BB" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1P3</accession>
    <name>A0A087S1P3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00636</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19647">
        <property type="protein sequence ID" value="KFM19647"/>
        <property type="gene ID" value="AAA799P11_00636"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.622"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007254">
        <property type="entry name" value="DUF373"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38815">
        <property type="entry name" value="PTHR38815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04123">
        <property type="entry name" value="DUF373"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="141"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="242" mass="26310" checksum="7298734C8986A406" modified="2014-10-29" version="1">MFYSVQRVVMKVSRSVEYSYAVFGKYLKMIAYDSRYSKFFLGVPGILLLIGGIASVFGITTEIFAVLVSILGGAFLIRAFDIDRVWSSWSKPTPMGFIRMFTMVAGGLLILSSVPAGVASIDSELIGADTGFVGKLTDQVIIGQFVAGVLPILWTGLGAIFAGTLLSNWIGGVPRQISDILRIIVLIALYPTIYQFTNIMISDVSSFTLIPPLLGGLAATLVSATILFKKYRKHKDQEMVSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Q2</accession>
    <name>A0A087S1Q2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19656">
        <property type="protein sequence ID" value="KFM19656"/>
        <property type="gene ID" value="AAA799P11_00645"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.631"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="213" mass="23628" checksum="434D4F3EDBCF7A99" modified="2014-10-29" version="1">MEFLLENILNLVGFLVGLGIGIMSFIGFRNTGSPTLFRLTIAFFSISLGFFVIWAGYMAEDLVIKAGHLERWVQTLGIAIQTVGYFFIAFSHSIKSFFPKSSYFRSVGILPFFLVSSVQLEHLFRSVSFILLAYGAIETMLSYIDNKNKGAISVSVGLALLALGEFLGWYSFVFPESILYTVSMVIKIGGLIALFIPVSKVPLTKIKFDEGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1R1</accession>
    <name>A0A087S1R1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00654</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19665">
        <property type="protein sequence ID" value="KFM19665"/>
        <property type="gene ID" value="AAA799P11_00654"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.640"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="308" mass="35834" checksum="C8B6BDB7B77B9BC0" modified="2014-10-29" version="1">MYFHNNQNFIDGFITGAVITICHMEELAVKKDFTNIYTQKFPNSYLKEMKRLDYRIPDKTKPLYLSIVKQLYNKLSKKINIIDIGSSYGINSALMKYNLTMSDLDDFFLKEEPSIEQSKQFFDQFSSDDSFEFYQIDISEPALRFSENVDLCKKGICVNLETGNLPIKELPHSDMIIATGCIGYIGYKAFSNIFELIKKQNSEENLENSDRGPVFAFSVLRIFDMADIEKTFDHYGYSLAKTDVHPIRQRRFSDLEEKQKTLSLLHDRGLDTKWLEDDGHFYADFYIASPKKLESQLVTLSKNLKKHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1S8</accession>
    <name>A0A087S1S8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00676</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19682">
        <property type="protein sequence ID" value="KFM19682"/>
        <property type="gene ID" value="AAA799P11_00676"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="61" mass="6766" checksum="5FDEFE8A929BC9D9" modified="2014-10-29" version="1">MAKMLELVGLVLIGIMFASFVGAFQPTIEPGLSPLFWGCAGAALTIIMYRKFKRKKDEETE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1Y6</accession>
    <name>A0A087S1Y6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nitroreductase protein</fullName>
            <ecNumber evidence="3">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00480</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19740">
        <property type="protein sequence ID" value="KFM19740"/>
        <property type="gene ID" value="AAA799P11_00480"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.463"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="2">
        <location>
            <begin position="54"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="215" mass="24193" checksum="EBB2BC7B23B5883A" modified="2014-10-29" version="1">MEPDIKEEKIYPLGYEPETTPESTDPNVRNQLINFILKSGPTEVVDTDLFAVMAKRRSTRKFLDKPVETTKIDKIIAAADTAPTAGNYQGFEIFYVKSPEKKKQLIEACNNQPYVNAPVVLVFCKNPSRVKFDFPEYVLKKFAIQDATLAAGYSQLAAQALGLSSIWIGMFDEQKVMDVIGTDLVPSSVLCIGYPKQTKFPKPRRNLKDLVHVTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S233</accession>
    <name>A0A087S233_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00532</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19787">
        <property type="protein sequence ID" value="KFM19787"/>
        <property type="gene ID" value="AAA799P11_00532"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.514"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="157" mass="19008" checksum="B326C783E77DFCD9" modified="2014-10-29" version="1">MSENTENKQKSMKEHSDKLAKLGMELSKIQFSYKVEEKTSKDYWQKRIEKFEEYNKKALEYYNQIFSLIKVADKEESERFLLMISKFRQLASSLIEIMEKIKENPSIINSKDKQQSQWSREIKNSITEQSNKCLHHERDMNSHFRDFYEKHLKNVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E0</accession>
    <name>A0A087S2E0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Galactose-1-phosphate uridylyltransferase protein</fullName>
            <ecNumber evidence="10">2.7.7.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">AAA799P11_00433</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.12" evidence="10"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19894">
        <property type="protein sequence ID" value="KFM19894"/>
        <property type="gene ID" value="AAA799P11_00433"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.413"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008108">
        <property type="term" value="F:UDP-glucose:hexose-1-phosphate uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033499">
        <property type="term" value="P:galactose catabolic process via UDP-galactose"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001937">
        <property type="entry name" value="GalP_UDPtransf1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005849">
        <property type="entry name" value="GalP_Utransf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01087">
        <property type="entry name" value="GalP_UDP_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000808">
        <property type="entry name" value="GalT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="SSF54197"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="GalP_UDP_transf" evidence="9">
        <location>
            <begin position="99"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-UMP-histidine intermediate" evidence="8">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000808-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM19894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="356" mass="40414" checksum="5CCFB444C7EF27CA" modified="2014-10-29" version="1">MTLDLSKRFNRHLLQITIMGDMRKDYVSERFMIVSKKEDKVKDPKKSPFAPGNESMTNPSVLSLVAKDGMLQRLQDSDDEFVEGWSIRVFESKNPIVSVDTENSYSDRPFYSEPAYGYHYIVVASPNQKDTFATIDTEQWSNILVVVQDRLRWLYTQKGVTYVSIYADQGELSGSANPHPHLNILTFSTIPPIIEEEAEASHKILNEKGVCPMCQTVNEEISGPRQVLQTEGFIAFCPWSPSYPYEFWIAPKKHTTSFSKITQKEINDLSLILRATLGGLSQTIKNVSYNLVFHLSPEKKNSRQIHWHIEIYPITKAWSGLERGYGIFLNDISPEDAAEKLGAACRKELANLVGIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M6</accession>
    <name>A0A087S2M6_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00284</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19980">
        <property type="protein sequence ID" value="KFM19980"/>
        <property type="gene ID" value="AAA799P11_00284"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="19"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="103" mass="11785" checksum="E58571FCB3CC4E93" modified="2014-10-29" version="1">MITMGKSLMDYNIEQSSSTDIKNIKWTKKNTTDPNKSKKKKKKQISSTNIILTKTTKTPSTPQRIFKIKDASSKQKKKKMASKAQNSSLDNCKIEQGYKRKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-02-10" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2M7</accession>
    <name>A0A087S2M7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydroxymethylglutaryl-CoA synthase protein</fullName>
            <ecNumber evidence="4">2.3.3.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00285</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thiolase-like superfamily. HMG-CoA synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.10" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19981">
        <property type="protein sequence ID" value="KFM19981"/>
        <property type="gene ID" value="AAA799P11_00285"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.278"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004421">
        <property type="term" value="F:hydroxymethylglutaryl-CoA synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006084">
        <property type="term" value="P:acetyl-CoA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010142">
        <property type="term" value="P:farnesyl diphosphate biosynthetic process, mevalonate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013746">
        <property type="entry name" value="HMG_CoA_synt_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013528">
        <property type="entry name" value="HMG_CoA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08540">
        <property type="entry name" value="HMG_CoA_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01154">
        <property type="entry name" value="HMG_CoA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HMG_CoA_synt_N" evidence="2">
        <location>
            <begin position="3"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="domain" description="HMG_CoA_synt_C" evidence="3">
        <location>
            <begin position="180"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="464" mass="52271" checksum="74124DCCF988A809" modified="2014-10-29" version="1">MAAGIDDIAIYIPRLYIDAADFANARGLDPVKLQKGLGVSQMAIVDANQDPAILAANACLKIMQKNKLSPEDIGRLYVSTESSFDESKAMNSFVIGMLEQVYGQGAFEHCGGVETKFACVSGSYALYDNTNWIRAGEAEGKHALVVVSDIAKYDMGSSGEMTQGAGAVVMLLNDNPRLLAFDPKVTSTSIKDEYDFYRPFGKETPIVHGQYSNMLYMIQVRKALEAYKKKVISSKLINIEPGETILDHMDYINMHLPYSNMGKKALAYLVRHEWRQLPRWKKVLQEIGMEEPIPKDPRGTIESVLSDEEFMAKDHEFTKLFTKTPEYQEVYESKLASSLIASSMIGNLYTASLYLGFRSSLEFEYQKGIQLEGKRVGFGSYGSGSSAMVFSGVIQPEFEEIVKNMNLEAEIGERRRLTWEEYEELHENKLSPEESMLKSKKEFTLVDVNKETESKGERRYIYNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2N3</accession>
    <name>A0A087S2N3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00291</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM19987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19987">
        <property type="protein sequence ID" value="KFM19987"/>
        <property type="gene ID" value="AAA799P11_00291"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.284"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="254" mass="28986" checksum="B6BFD5A68EAA1203" modified="2014-10-29" version="1">MDKNSLITKLTKAIDESKGDWGRNQYLLKRIKSNKEIITSDKHYLEKLLDVESLEITEEPQKPKLPKKDKTVFLNPNLVKCDTCKKPIEIDEKSIRYQNLWYHKSCRGEVFLKKDRKNKTSKPRKKVKAKDPIQLVLVGVIFVFLVGAVYFILGPISMIAMGLGGGLTVYHMVGATGKLYSRNKPGRTGPSAFLLFLLASPFVIGGMIAYEGYSLLESPTRIILLWAMTISFWSTMLLFQWQFSASIEKRFNQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Q0</accession>
    <name>A0A087S2Q0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Rubredoxin-like zinc ribbon domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00308</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20004">
        <property type="protein sequence ID" value="KFM20004"/>
        <property type="gene ID" value="AAA799P11_00308"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.302"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022002">
        <property type="entry name" value="DUF35_Znr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12172">
        <property type="entry name" value="DUF35_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF35_N" evidence="1">
        <location>
            <begin position="9"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11775" checksum="441B524836179BFD" modified="2014-10-29" version="1">MSFESELSKGNFLIPKCTECKKIVWPPMEFCDHCMGKTSLKGGDFEGKIMEFSRQNDNYFCIVEIEDSFRIMAKMIQKPHIEQVVTVSKCGISKGNYFFEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R0</accession>
    <name>A0A087S2R0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00319</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20014">
        <property type="protein sequence ID" value="KFM20014"/>
        <property type="gene ID" value="AAA799P11_00319"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.312"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="94"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="123" mass="14133" checksum="42CA82755EAB2B91" modified="2014-10-29" version="1">MENPVHKHLQDLYGLNPNIPHMALQFPRLPPGLTHPMFGIHQNPVKEQFSRDVESVSQKLQGFQHMYQQYAAGLLTGNQIVPPGHPLYTKQNSVQTLQAENDKLLKENTELKKKLEKETKKQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2R9</accession>
    <name>A0A087S2R9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">EF-hand calcium-binding domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00328</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20023">
        <property type="protein sequence ID" value="KFM20023"/>
        <property type="gene ID" value="AAA799P11_00328"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="693" mass="81104" checksum="669C00C1A909A07E" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T0</accession>
    <name>A0A087S2T0_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fido domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00339</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20034">
        <property type="protein sequence ID" value="KFM20034"/>
        <property type="gene ID" value="AAA799P11_00339"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003812">
        <property type="entry name" value="Fido"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51459">
        <property type="entry name" value="FIDO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fido" evidence="1">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51459"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="77" mass="9285" checksum="4D456F70C2324256" modified="2014-10-29" version="1">MEGLVFEQPFKNGNKRTSVSIALLIMRIHHYDIEGYNQEKKQEEFYKLLDKTMMKMEGDKTIRSELEEYLRNNLTRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-12-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T1</accession>
    <name>A0A087S2T1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Tyrosine recombinase XerC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20035">
        <property type="protein sequence ID" value="KFM20035"/>
        <property type="gene ID" value="AAA799P11_00340"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.334"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="148"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="348" mass="40849" checksum="C0016311444D790F" modified="2014-10-29" version="1">MPLKSKSKSKDWDVHDYEHRIQLVHQKARAELSKRNYQLFSDYDKSMVRIPLAKATRSKHLTTILTETKMINKEWKDVLRADIDELVYKIMETYADEKGQESNTSYDMKKILRIFYRWYKTGNRNKNPNEPEPYEVQGIVLSKVKDKIVREDLLTDVDLEKLLVACAENQRDRAFIDVHTEAGTRPGETLSLRIKDVKIDEHGAIINVIGKTNARPVRLIRSVPNLLAYLQNHFDKNNPDAPLWYMIDPDDFGRPMTYYATRAMLLRRAKKADLPKKVYLNLFRHSEATRMANFMTEAQLRKRHGWTPTSKMPARYVHLVNSDVENAIFEQYGIKKKQSKKPHVSWKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T9</accession>
    <name>A0A087S2T9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00353</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20043">
        <property type="protein sequence ID" value="KFM20043"/>
        <property type="gene ID" value="AAA799P11_00353"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.342"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="187" mass="21340" checksum="04E889043D8D4760" modified="2014-10-29" version="1">MKKAIKTAFVFGIFSVILISISNDVFAESTIADFVDPNKDKQYYLDRYYNEPTYKSWFDRNYPGITIEQAVGIDSEDSTMDSILNKEFIQEADATLVNQETPQTNNSEMAQMMLAIGGFGLLFGAVYGVKRKVNDNTRQISINKDTIKNKIIKPITRTNPLEILQIRLAKGEITIEEFESLEKKLKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y1</accession>
    <name>A0A087S2Y1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycoprotein 3-alpha-L-fucosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.214</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00156</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.214" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20085">
        <property type="protein sequence ID" value="KFM20085"/>
        <property type="gene ID" value="AAA799P11_00156"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018392">
        <property type="term" value="F:glycoprotein 3-alpha-L-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="14"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="350" mass="39922" checksum="608A509C02A699DA" modified="2014-10-29" version="1">MSETEKLPTNPLVSVIIINFNGLDYILDCIDSVFKSNYANFEVILIDNNSTDGSSDKCKEKFPKITLIQNKKNLAMAARNKGIDVAKGDFVVFLDADTVVNSNWLDVLLDSYKKHGKGLYQGKLLKKDDPSIIESCGDMANIFSTGFARGRGQKDLNQFENFQKISFPVGACTFSSTQTFKEIGYVDESSLFFLMLDDLDYGWRGWLLNIPSYYEPKCVIYHVGSPILQWNSKKFFFMERNRLICLFSLYSKKTLFKIFPLLILYDMGVSLFLISKGMTFTKFKSTISFLGMLPSVLKRRKFIQSKRKLKDSDIIKNFVDGIDIPVDMNTDSSIFVSIVKKLNKMARKLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y5</accession>
    <name>A0A087S2Y5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">dTDP-4-dehydrorhamnose reductase protein</fullName>
            <ecNumber evidence="2">1.1.1.133</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rfbD</name>
        <name evidence="2" type="ORF">AAA799P11_00160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.133" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20089">
        <property type="protein sequence ID" value="KFM20089"/>
        <property type="gene ID" value="AAA799P11_00160"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008831">
        <property type="term" value="F:dTDP-4-dehydrorhamnose reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005913">
        <property type="entry name" value="dTDP_dehydrorham_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029903">
        <property type="entry name" value="RmlD-like-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10491">
        <property type="entry name" value="PTHR10491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04321">
        <property type="entry name" value="RmlD_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RmlD_sub_bind" evidence="1">
        <location>
            <begin position="8"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="297" mass="33691" checksum="2538547D5DCB346A" modified="2014-10-29" version="1">MEKVTLPKILIIGENSLIGSTLLTYVKDNFEVYSTHHNSKINKKNSVQIDLVKEPQKLVDLITKIKPNFVVHTVAYPNVDFCEKNHDAAYFLHVIITKKIAHACSSVNAKLLYFSTDAVFDGIEGKKFSELDTTNPLSYYGKTKLEAEKVIMKISENNLVFRTTVIYGPFYNSRFTSWVLDNLKQNKPVPAFTDQLNTPTLVDDLCKFIVHAFSNNLSGIFHAVGKTCLSRYDFALRLAQKFNFDQKLIVPTISSETNQVAPRPKNGCLDATKLEKLLNFDFCDIDEGIQFIKDHQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2Y7</accession>
    <name>A0A087S2Y7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucose-1-phosphate thymidylyltransferase protein</fullName>
            <ecNumber evidence="2">2.7.7.23</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">strD</name>
        <name evidence="2" type="ORF">AAA799P11_00162</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.23" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20091">
        <property type="protein sequence ID" value="KFM20091"/>
        <property type="gene ID" value="AAA799P11_00162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003977">
        <property type="term" value="F:UDP-N-acetylglucosamine diphosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="319" mass="35078" checksum="C646EA6F43D2844F" modified="2014-10-29" version="1">MKVVLLAAGLGKRLEPLTSSLPKPMIMISGKPILEHIVISLQKYGFFDFCIVVGYLGDKIKSYFGDGTSLGIHISYVEQKIFSGTASATKLAKNFVGNEPFLLYLADTIIPENLENYLQNMINSDFETCILSSETEQSKIGNVGSVEVKNDHVLKITEKSTVSKSNLSWAGVAFFKNNNIFKIIENLEPSERGEFEITEAMNLILNHNGQIGNFTCKKYVDAGTISGILELNKIILNQKSSINFSKTNCDTTIQNPVYVGKNCRIGNKVRLGPFVSIGNDVCIGDNAKLEHVVVLDNSNIKSNEILSKSVIDSKNNILS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S303</accession>
    <name>A0A087S303_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Methyltransferase domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00178</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20107">
        <property type="protein sequence ID" value="KFM20107"/>
        <property type="gene ID" value="AAA799P11_00178"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008884">
        <property type="entry name" value="TylF_MeTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40036">
        <property type="entry name" value="PTHR40036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05711">
        <property type="entry name" value="TylF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="230" mass="27219" checksum="614FA2C866F84898" modified="2014-10-29" version="1">MSFFEKIVFRILKANAYLSKSYDYDLSHQFRKKEMEESMQFIDENMPDALCFPASPKERLLDYAISQIKKGTVLEFGVRHGESIRHIANKLRDRQIHGFDSFEGLPEDWTGNGFSQNDFTLHGKMPKVPENVILHKGWFEDTIPEYQKKYDENIAFINLDCDLYSSTKTVFDSLGHKMKKNTILLIDDFFNYRNWKQHQFKAFQEFVEQNQIKFEYLAFNGKHGVCIRIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S307</accession>
    <name>A0A087S307_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spermidine N-acetyltransferase protein</fullName>
            <ecNumber evidence="2">2.3.1.158</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">speG</name>
        <name evidence="2" type="ORF">AAA799P11_00182</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.158" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20111">
        <property type="protein sequence ID" value="KFM20111"/>
        <property type="gene ID" value="AAA799P11_00182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046027">
        <property type="term" value="F:phospholipid:diacylglycerol acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="15"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="184" mass="21846" checksum="80EA019FE9317312" modified="2014-10-29" version="1">MSSESSLRILHKTSPKIFQEFLLKLEKNTLYNFNPFGKINPSNVSSIVEKELFRKDKIKFFSFCENSLIAYSYLTKFQKKSKKHNCILGIVIGDKWQGEGFGKKICKHMINYAWQKNFEKVWLTVFDNNTSAICLYKSLGFEIEGIFMNDEQYLKKQRHVISMAIFNNKRNYVNKRKKIWQNIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S309</accession>
    <name>A0A087S309_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pseudaminic acid synthase protein</fullName>
            <ecNumber evidence="2">2.5.1.56</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00184</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.56" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20113">
        <property type="protein sequence ID" value="KFM20113"/>
        <property type="gene ID" value="AAA799P11_00184"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.183"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050462">
        <property type="term" value="F:N-acetylneuraminate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016051">
        <property type="term" value="P:carbohydrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013132">
        <property type="entry name" value="Neu5Ac_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03102">
        <property type="entry name" value="NeuB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NeuB" evidence="1">
        <location>
            <begin position="42"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="353" mass="40305" checksum="EDEB17062374D020" modified="2014-10-29" version="1">MIGHITHYVIIGNKQIGTNKPVFIIAEAGVNYNNKLPLAYKMIDIAAKAGADAIKFQTFKADNIQLKNSIKPHYQKLIKNTNYYNLIKKLETSFEDQIKLFNYCKKKKIIFLSTPYDKQSLDFLTQINVPAFKISSSDATNHLFLELVLKKRKPILLSTGLTTRKDVESTIKLVEKFKMKKKLVLFQTNSDYPTKNEDVNLKVIPDYMKRYKCLVGFSDHTQDIIASLGAVAMGACIIEKHFTISKNLSGPDQKSSLEPLELKEWIKKIRVLEKSLGNKNKTITNSEKKNLTMRKILVINPAKKDTIISRKLLSAKRGDGKGILPLQKNVNKILGKKLVKNVYQERKFTWDLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S339</accession>
    <name>A0A087S339_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3-hydroxy-3-methylglutaryl coenzyme A reductase</fullName>
            <shortName evidence="3">HMG-CoA reductase</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hmgA</name>
        <name evidence="4" type="ORF">AAA799P11_00214</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the HMG-CoA reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20143">
        <property type="protein sequence ID" value="KFM20143"/>
        <property type="gene ID" value="AAA799P11_00214"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.213"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004420">
        <property type="term" value="F:hydroxymethylglutaryl-CoA reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015936">
        <property type="term" value="P:coenzyme A metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00644">
        <property type="entry name" value="HMG-CoA_reductase_classII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.770.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002202">
        <property type="entry name" value="HMG_CoA_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004553">
        <property type="entry name" value="HMG_CoA_Rdtase_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023074">
        <property type="entry name" value="HMG_CoA_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023076">
        <property type="entry name" value="HMG_CoA_Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009023">
        <property type="entry name" value="HMG_CoA_Rdtase_NAD(P)-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009029">
        <property type="entry name" value="HMG_CoA_Rdtase_sub-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10572">
        <property type="entry name" value="PTHR10572"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00368">
        <property type="entry name" value="HMG-CoA_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00071">
        <property type="entry name" value="HMGCOARDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55035">
        <property type="entry name" value="SSF55035"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56542">
        <property type="entry name" value="SSF56542"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00532">
        <property type="entry name" value="HMG_CoA_R_NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01192">
        <property type="entry name" value="HMG_COA_REDUCTASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50065">
        <property type="entry name" value="HMG_COA_REDUCTASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="418" mass="45086" checksum="E3522BE2C8F88D02" modified="2014-10-29" version="1">MPDSSISKFFEKSRKERLDIIKNFANLSEDDIKSLELPDGGITFDKADKMVENAFGTFSLPLGVATNFKINNKDYLVPMVIEEPSVIAAASKAAKLARPKGGFTVEADESYSIGQIQILGTNIDDAISKIKENTQEILDLANSKSNTLSKMGKGAKEITCKKLDTDFEPMLIVELLIDVGDAMGANVTNTMCEGIAPLIEKLTGGKTLLRILSNYSTRRIVKATAIFDKELVGGEEVVDNMIHAYQFAKHDVYRAVTHNKGIMNGVIAVANATGQDSRAIEAAANAYASRSGQYRSLSEWTKNSDGNLVGTLEIPLSVGIVGGIINVHPVAKICTKILGAESAKEMACIITATGLAQNFSAMRALATDGIQKGHMRLHARNLAFAAGASTEQIDKIVSQMVEENNISVNRAKELLEQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S345</accession>
    <name>A0A087S345_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-octaprenyl-4-hydroxybenzoate carboxy-lyase protein</fullName>
            <ecNumber evidence="1">4.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ubiD</name>
        <name evidence="1" type="ORF">AAA799P11_00225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20149">
        <property type="protein sequence ID" value="KFM20149"/>
        <property type="gene ID" value="AAA799P11_00225"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.219"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002830">
        <property type="entry name" value="UbiD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30108">
        <property type="entry name" value="PTHR30108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01977">
        <property type="entry name" value="UbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00148">
        <property type="entry name" value="TIGR00148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="443" mass="49881" checksum="7BF8CA7B372AA35E" modified="2014-10-29" version="1">MSDLRNYISKIKKNKELKTVKTKVSTKYEIAGITAKVDGLYAVLFENIKESDFNLVANLVGTRKRFALAVGGTEDNIHEKVITAIKKAKAPKIISSGKFQENKSKNLLSMPIVTHFEKESGPFITSSIAYAKNPETGKQNSSFHRMMPIDKTHFSIRMVEGRHLHRCFVDAKEHGEDLKIAITVGVHPAVSIAGAYQAQWGEDEIDIANSLLGGKLTLTKLPFTGLNVPSGSEIVMEGRILQDKTHPEWMVEMLQTYDHKRSQPVFELENMYFRNNPIFHDVLSGYSEHRLLMGMPIESKLNDDLKKAFRQTQQVSMTNGGCNWLHAVVQIKKKSDSDAKKIIKKTFESHRSLKQVTVVDEDIDPNSAEAVEYAMATRFQADKDLVILKNVRGSSLDPSSDQKKLQTAKMGIDATRSLSKRPEGFELAKIPKINKIKLEKYFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-09-29" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S363</accession>
    <name>A0A087S363_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">6,7-dimethyl-8-ribityllumazine synthase</fullName>
            <ecNumber evidence="4">2.5.1.78</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ribH</name>
        <name evidence="7" type="ORF">AAA799P11_00243</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2S)-2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + H(+) + 2 H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26152"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58201"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="2.5.1.78"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; riboflavin biosynthesis; riboflavin from 2-hydroxy-3-oxobutyl phosphate and 5-amino-6-(D-ribitylamino)uracil: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the DMRL synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.78" evidence="4"/>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20167">
        <property type="protein sequence ID" value="KFM20167"/>
        <property type="gene ID" value="AAA799P11_00243"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.237"/>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009349">
        <property type="term" value="C:riboflavin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000906">
        <property type="term" value="F:6,7-dimethyl-8-ribityllumazine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.960">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034964">
        <property type="entry name" value="LS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002180">
        <property type="entry name" value="LS/RS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036467">
        <property type="entry name" value="LS/RS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21058">
        <property type="entry name" value="PTHR21058"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00885">
        <property type="entry name" value="DMRL_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52121">
        <property type="entry name" value="SSF52121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00114">
        <property type="entry name" value="lumazine-synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0686">Riboflavin biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="133" mass="14522" checksum="0F45EED5A8AA1C63" modified="2014-10-29" version="1">MVSEFNDEVTSRMLSVAKEKADSLKLKIIYTCSVPGAYDMPIIVDSLLQKNDVDAVVTLGAIIKGQTKHDEVISHAAAQALTDISIKYQKPVSLGISGPGMQERHAHARIRPVAERAVEAVIKISSELKRIQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F3</accession>
    <name>A0A087S3F3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00004</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20257">
        <property type="protein sequence ID" value="KFM20257"/>
        <property type="gene ID" value="AAA799P11_00004"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.4"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="134" mass="14949" checksum="5ACBBE011FD4AFD9" modified="2014-10-29" version="1">MYYVRILLQISRLTNKSKFKLLGALVLVGLVVLIPITSENFTDENKIHISIHISSTLLGVFLSIVALVTYFEFKTTRLFLVLCAFTTITAVEIFSIISFVLSEIPPTPDSDSLVTHGLIFAMLSFFAIGIFRSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3F7</accession>
    <name>A0A087S3F7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Blue copper domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00008</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20261">
        <property type="protein sequence ID" value="KFM20261"/>
        <property type="gene ID" value="AAA799P11_00008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="518" mass="59450" checksum="12F46A9E308BA4A7" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3H3</accession>
    <name>A0A087S3H3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ycf48-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00024</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20277">
        <property type="protein sequence ID" value="KFM20277"/>
        <property type="gene ID" value="AAA799P11_00024"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.24"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="317" mass="33781" checksum="4E7FB9EDE73D356B" modified="2014-10-29" version="1">MRSTNTKILLIVIPIAIIGIVLSIPVQNNLDTPASKLHGPWSDIHGVGMFLSGNDDTLYLATHQGLFEKTDSGWLHVGNDNADLMGFSMNYDTQTMYSSGHPKSGGNLGFRISNDHGTSWSTVSKVKNTPVDFHAMSASQAQNGLIYGSPGGGSELFVTSDDGTSWSSLNIPNKIISLATDPLDPNRVYAGTTSGLYVSNDQGKQWSPVDSDIEKGVITGIGFSSDGKTMYVFSTLDGNGMIVKSIDGGNTMVKTQSQIADVRGVWNFAPGRDGEIYAIAAQQVASELAMSVYKTTDSGNTWILEGTNNLKLALTGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3J7</accession>
    <name>A0A087S3J7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00048</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20301">
        <property type="protein sequence ID" value="KFM20301"/>
        <property type="gene ID" value="AAA799P11_00048"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="347" mass="39110" checksum="B848C1C764B0CDFB" modified="2014-10-29" version="1">MGTGIQDTNSNALSQTDFVWTFDESIGSSGEGSGCNGDCEEPTLGVLPNGKRIVEEGFTYNGYSVDVERFFTPYPLITTQVGKQNTAQFKIYENRGPNNIAHFDFAFGLGKDQIISDSKAMIEVDFARDGTQTVNIVDPENVLDNVTVTTDIVACNDGPIQCLEITINHMFRAPLDFDIVGTNVWDHSRQSWQNYYNHGIEVVGPSMNPAKQYGGVNQGQIYHLTETGKNTAVDEFGESWTFQYGIWMKDYIKQERIQDGETLVFDRMHSDFASYKDNLSQEAFDQLAQMCPVCIEQYADFDDSTSLEYGDRKSKLADPQIQTIMNLENQKAQEVLKYILNPQLLYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3L0</accession>
    <name>A0A087S3L0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00061</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20314">
        <property type="protein sequence ID" value="KFM20314"/>
        <property type="gene ID" value="AAA799P11_00061"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="135" mass="15122" checksum="71AF2FADDFC3E814" modified="2014-10-29" version="1">MKKSLNNTLQKPTLSIKDKTKILVTVSVAALVISVPLGFERIDFEVRGYYAIHIVSVIFGLVLSIIGIITYFEFRKTRLLMVFAAFLTITIAESTSLVNLINPIFDIVYGTHDLIIHGLVLVMLSFFVVGIFRTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3M3</accession>
    <name>A0A087S3M3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00074</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20327">
        <property type="protein sequence ID" value="KFM20327"/>
        <property type="gene ID" value="AAA799P11_00074"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.71"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="360" mass="43241" checksum="59F114CA3FE82A67" modified="2014-10-29" version="1">MNTRKLQRITHNIEQRVSSKMFHSEDEELGIFFALAENGPLILTSLAEKTSSYGPWEANRWAVNSRMKGTRGNISLIDFEYIKKRPHETRNRGKDGESYCLTTKGFFATLSTRKTPIEKTYLFRKYKQFISDLLNRKIEFVGKGTNVDAELTAHEKKYLKNLFVEYIKYQMYVFLIWHEANEIGLHTKINTEWYFVNFFETFEKFVITEFPKILDKKRIREYKEILRRYMTLAKTLHGIEYFSNSDNNIDKKIVKRIQINFKMMKPFVFEWFRYFDRLQMYSPVDKPYSVTKIQSYILHPPEYGIDIEYEGIPGHKKMIKPELKSIVTNELEKIFQKQGLFVEEFWKTDQREKFQKDRVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N7</accession>
    <name>A0A087S3N7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Small heat shock protein C4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00088</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20341">
        <property type="protein sequence ID" value="KFM20341"/>
        <property type="gene ID" value="AAA799P11_00088"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.85"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="SSF49764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="3">
        <location>
            <begin position="20"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM20341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="126" mass="14792" checksum="80EBB83A2136DB07" modified="2014-10-29" version="1">MKDDFEIRAVFPSISSLIDDIEHRILSPLSYLKEFDNHWLLELDLPMVNKKDIKVTFDKNMINVEAKLKERYSEEKLGKISKFEYFKKSVSLPNMVDVKNTTAKFQKGRLEIKIPKKATERSIKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3N8</accession>
    <name>A0A087S3N8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00089</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20342">
        <property type="protein sequence ID" value="KFM20342"/>
        <property type="gene ID" value="AAA799P11_00089"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.86"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018592">
        <property type="entry name" value="DUF2024"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023122">
        <property type="entry name" value="NE1680-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09630">
        <property type="entry name" value="DUF2024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160766">
        <property type="entry name" value="SSF160766"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="85" mass="9650" checksum="696FED3A797257EE" modified="2014-10-29" version="1">MEIHVYDTYVKAADGHTMHFDVITGEKDHDKAITYGKEWLKSIGEENAVMTQNECQFCHSQGAPEPVEQAIKENGYFIQKMEGCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3P6</accession>
    <name>A0A087S3P6_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Nicotinate-nucleotide pyrophosphorylase [carboxylating]</fullName>
            <ecNumber evidence="6">2.4.2.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Quinolinate phosphoribosyltransferase [decarboxylating]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nadC</name>
        <name evidence="9" type="ORF">AAA799P11_00097</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in the catabolism of quinolinic acid (QA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>CO2 + diphosphate + nicotinate beta-D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + 2 H(+) + quinolinate</text>
            <dbReference type="Rhea" id="RHEA:12733"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:29959"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate D-ribonucleotide from quinolinate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Hexamer formed by 3 homodimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the NadC/ModD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.19" evidence="6"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20350">
        <property type="protein sequence ID" value="KFM20350"/>
        <property type="gene ID" value="AAA799P11_00097"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.94"/>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00331"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004514">
        <property type="term" value="F:nicotinate-nucleotide diphosphorylase (carboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01572">
        <property type="entry name" value="QPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004393">
        <property type="entry name" value="NadC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027277">
        <property type="entry name" value="NadC/ModD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036068">
        <property type="entry name" value="Nicotinate_pribotase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037128">
        <property type="entry name" value="Quinolinate_PRibosylTase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002638">
        <property type="entry name" value="Quinolinate_PRibosylTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022412">
        <property type="entry name" value="Quinolinate_PRibosylTrfase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32179">
        <property type="entry name" value="PTHR32179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01729">
        <property type="entry name" value="QRPTase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02749">
        <property type="entry name" value="QRPTase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006250">
        <property type="entry name" value="NadC_ModD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51690">
        <property type="entry name" value="SSF51690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00078">
        <property type="entry name" value="nadC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 9" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3 6" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="QRPTase_N" evidence="8">
        <location>
            <begin position="18"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="QRPTase_C" evidence="7">
        <location>
            <begin position="105"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR006250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM20350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="272" mass="29824" checksum="C98AA5A736FCF53E" modified="2014-10-29" version="1">MLSFNSKKQLLQFLSEDIGKGDITSALLPKKKITAKIISRESAIVGGATHAKQIFKIKGCNVRILKKDGSKARPNQTIMTITGNAGKILTCERTALNLLTRMSGIATQANELVKKIPRKTKLYATRKTAPGLRYFDKEAVEIGGGKKHRLRLDEMVMIKDNHIAVGDSLESLIKKAKKRHRKFEVEVENTADAVLAAKEGATIIMLDNFTPNQIKKTITVLKNQNLRKKVLLEASGGINSKNISKYGQTGVDIISVGSITNSVKGIDMSLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3R0</accession>
    <name>A0A087S3R0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Conserved virulence factor C protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cvfC</name>
        <name evidence="1" type="ORF">AAA799P11_00111</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20364">
        <property type="protein sequence ID" value="KFM20364"/>
        <property type="gene ID" value="AAA799P11_00111"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.110"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004155">
        <property type="entry name" value="PBS_lyase_HEAT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00567">
        <property type="entry name" value="EZ_HEAT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="163" mass="18129" checksum="1A292DE8CCF609FD" modified="2014-10-29" version="1">MLQVVTDDRLTLFAEMEKKYEQKDTEYFVNLLDHPDYVVRTRATCILVDFGGEDKVPYIAKVLKNDDNELVRHEAAFSLGQMCYSSSVPPLTDATLNDPSMFVRHEAAIALGVVGNKDAKDALEKALDDPDKPVVESAVVALSNIEFMEKLSKNEKFAKLTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3S5</accession>
    <name>A0A087S3S5_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Methylenetetrahydrofolate reductase (NAD(P)H)</fullName>
            <ecNumber evidence="3">1.5.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">AAA799P11_00126</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.20" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20379">
        <property type="protein sequence ID" value="KFM20379"/>
        <property type="gene ID" value="AAA799P11_00126"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.125"/>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004489">
        <property type="term" value="F:methylenetetrahydrofolate reductase (NAD(P)H) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006555">
        <property type="term" value="P:methionine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003171">
        <property type="entry name" value="Mehydrof_redctse-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02219">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="SSF51730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="KFM20379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="245" mass="27619" checksum="0E73A3D1C1B50999" modified="2014-10-29" version="1">MTIRYEANPPKILPDVDTDQSIKKFIERIKNISKKCDAIHLTENVLGFQRVSPLEVGKIIKEEIPDLPITVSLRVRDKSEEEIFEFAEKCIEIGFAGILVLMGDPSQTGKVDSGQIPSLTVKKLREKNVDSKIDLYLSVSNKPNFSKLAKKKDARPKGFMTQVVQNTEQVQALSDNLKEFSIIPIILFPSQKNEKSAKFLGLDLESYSKEFEEVLRKSHEITGDVLLTSPNDFTGLNEFLGKTTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3T9</accession>
    <name>A0A087S3T9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20393">
        <property type="protein sequence ID" value="KFM20393"/>
        <property type="gene ID" value="AAA799P11_00140"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="3"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="62" mass="7514" checksum="1BDC0E9B8DFD1227" modified="2014-10-29" version="1">MTTQNNEEKIRQYEELQKEYQKLITEYKEIESDNPQSEKLPEKIKEMIGKQKEIQDLSLKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3U2</accession>
    <name>A0A087S3U2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00143</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20396">
        <property type="protein sequence ID" value="KFM20396"/>
        <property type="gene ID" value="AAA799P11_00143"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="56"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="145" mass="16789" checksum="BEB63EAA762AED83" modified="2014-10-29" version="1">MNVKKPKIKIGHNLRVPKRKKTRLNPLGIQKNKLSKLYGTTKTRKKPHKKSSNKSHSKKDSSLKEKIKSQKQIQQKNSEELKKNIKKLQTLVVSFSGLEQLSEKSIADIQKKRQKICAQNQEIVKKINLAVEKLAKYESKYKEIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RNB3</accession>
    <name>A0A087RNB3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Isoleucine--tRNA ligase protein</fullName>
            <ecNumber evidence="1">6.1.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ileS</name>
        <name evidence="1" type="ORF">AAA799P11_01520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.5" evidence="1"/>
    <dbReference type="EMBL" id="JOSZ01000098">
        <property type="protein sequence ID" value="KFM14967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM14967">
        <property type="protein sequence ID" value="KFM14967"/>
        <property type="gene ID" value="AAA799P11_01520"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004822">
        <property type="term" value="F:isoleucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM14967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="110" mass="12498" checksum="3E6181816D94F051" modified="2014-10-29" version="1" fragment="single">IISALQKNSKFDFSIDGEVISLDNEDFVIDFDADEDFAVSKRDNYVVFISTSRNKEMMAKGLIKDVARRLQTLRKERGYNPTDVLGVASILDLDEESLEMIKEKADDLAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RQ91</accession>
    <name>A0A087RQ91_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000080">
        <property type="protein sequence ID" value="KFM15645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM15645">
        <property type="protein sequence ID" value="KFM15645"/>
        <property type="gene ID" value="AAA799P11_01490"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1382"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010293">
        <property type="entry name" value="Sbt_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40400">
        <property type="entry name" value="PTHR40400"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05982">
        <property type="entry name" value="Sbt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM15645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="74" mass="7893" checksum="4BA919264D5FDC15" modified="2014-10-29" version="1" fragment="single">MFGLLMASASFIAAPAVLRHAIPQAKPSLYITSALGITFPFNIIVTLPILFAISTFVHNGEGAIDLFNFITEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RSV1</accession>
    <name>A0A087RSV1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01424</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000047">
        <property type="protein sequence ID" value="KFM16555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16555">
        <property type="protein sequence ID" value="KFM16555"/>
        <property type="gene ID" value="AAA799P11_01424"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1349"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM16555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="188" mass="22111" checksum="763D1617F8B8D1F5" modified="2014-10-29" version="1">MDKNSEIIRTEIIRILNENGKIRGTELAKRVMKKVGNEKTVYREISALVESGDIEKRVHSRAHIEYELVNLYESVNNQLKNLHSEINTIYEEIENFDAINNVQKFSFHERLRSVIHLIQIVQSTDGIMKLLSFYPTFRKDKMFPQINRKIDDCWHAIMTNISHQPEDSFLNEVLANLRISRLDTKNIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RTL0</accession>
    <name>A0A087RTL0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_01406</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000042">
        <property type="protein sequence ID" value="KFM16814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16814">
        <property type="protein sequence ID" value="KFM16814"/>
        <property type="gene ID" value="AAA799P11_01406"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1334"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM16814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="71" mass="8040" checksum="ED7133B4513962D5" modified="2014-10-29" version="1">MIREKLHWTFWVGIGFLIAGGISWAILLAGEGPPSFVEETITYSYGWVIFGIALIIYSTIRKFWKSKTTGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RU42</accession>
    <name>A0A087RU42_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">30S ribosomal protein S28e</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rps28e</name>
        <name evidence="4" type="ORF">AAA799P11_01393</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the eukaryotic ribosomal protein eS28 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000039">
        <property type="protein sequence ID" value="KFM16996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM16996">
        <property type="protein sequence ID" value="KFM16996"/>
        <property type="gene ID" value="AAA799P11_01393"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1323"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00292">
        <property type="entry name" value="Ribosomal_S28e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000289">
        <property type="entry name" value="Ribosomal_S28e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028626">
        <property type="entry name" value="Ribosomal_S28e_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10769">
        <property type="entry name" value="PTHR10769"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01200">
        <property type="entry name" value="Ribosomal_S28e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00961">
        <property type="entry name" value="RIBOSOMAL_S28E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM16996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="70" mass="7756" checksum="88F44723594C975C" modified="2014-10-29" version="1">MSATTDEVVHSEIIQIVGRTGIAGEVIQVRVKVLTGKDKGRILTRNVKGSVRLGEILMLRETEREAKKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RUU5</accession>
    <name>A0A087RUU5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ATP synthase subunit c protein</fullName>
            <ecNumber evidence="8">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">atpE</name>
        <name evidence="8" type="ORF">AAA799P11_01367</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the V-ATPase proteolipid subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000035">
        <property type="protein sequence ID" value="KFM17249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM17249">
        <property type="protein sequence ID" value="KFM17249"/>
        <property type="gene ID" value="AAA799P11_01367"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1302"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033179">
        <property type="term" value="C:proton-transporting V-type ATPase, V0 domain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038662">
        <property type="entry name" value="ATP_synth_F0_csu_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002379">
        <property type="entry name" value="ATPase_proteolipid_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000245">
        <property type="entry name" value="ATPase_proteolipid_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035921">
        <property type="entry name" value="F/V-ATP_Csub_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00137">
        <property type="entry name" value="ATP-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00122">
        <property type="entry name" value="VACATPASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81333">
        <property type="entry name" value="SSF81333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_C" evidence="7">
        <location>
            <begin position="4"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="KFM17249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="66" mass="6596" checksum="CCACF9FFB6847A64" modified="2014-10-29" version="1" fragment="single">LKILGAGLAFGLAAFGAGIGLGQVGAAGLAVISENPALQSKVFIFVGMVESIAIYGIVMMFIILGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXI8</accession>
    <name>A0A087RXI8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase YbeM protein</fullName>
            <ecNumber evidence="2">3.5.5.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybeM</name>
        <name evidence="2" type="ORF">AAA799P11_01223</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.5.1" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000021">
        <property type="protein sequence ID" value="KFM18192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18192">
        <property type="protein sequence ID" value="KFM18192"/>
        <property type="gene ID" value="AAA799P11_01223"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1176"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080061">
        <property type="term" value="F:indole-3-acetonitrile nitrilase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001110">
        <property type="entry name" value="UPF0012_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01227">
        <property type="entry name" value="UPF0012"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="140" mass="15469" checksum="89DEF692DF8E7219" modified="2014-10-29" version="1">MASGSKIAKPVKTAVGKVGMMICYDLRFPEMSRSLAAAGSEVLVAPSAWVKGNMKEEHWITINKTRAIENGCYVIAPDQVGNIYCGRSLVVDPYGKILLDMKKKQGIGYANIDLKKVKQTRKVLPLLKNRRTDVYPTLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXQ9</accession>
    <name>A0A087RXQ9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_01185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000020">
        <property type="protein sequence ID" value="KFM18263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18263">
        <property type="protein sequence ID" value="KFM18263"/>
        <property type="gene ID" value="AAA799P11_01185"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1142"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="154" mass="17793" checksum="9AC6B1B31398DDEE" modified="2014-10-29" version="1">MVRSRYWKITSDEMEGFGYNEDNLLNWEIKCVREPEEEAHFIGVFMYRNGTAFDYESVKGICYFHNNIDRKELPEITSFLQGKFGGKEMEKGERIFLKGSQEIYSSKDIASLAKEMESKFNTKAIISLEFEGVSIEQLKEEGLPEAKLLPIPGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RXY8</accession>
    <name>A0A087RXY8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Small heat shock protein C4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_01117</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000019">
        <property type="protein sequence ID" value="KFM18342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18342">
        <property type="protein sequence ID" value="KFM18342"/>
        <property type="gene ID" value="AAA799P11_01117"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1078"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="SSF49764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="3">
        <location>
            <begin position="41"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM18342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="157" mass="17881" checksum="409AE7BD7618E0AE" modified="2014-10-29" version="1">MAAKPAKKPKTPTSMLGLPELDRVFENFRKDIERSFMTFPKIDFAGFPKIPDSGCDVIDEGKQIRMRMNVPGLKKNEINLNVTDKSIEVTGEHKEEEKKKNYLRKERHSMSYYQTIPLSEKIIPGKVKAKLNDGVLDVVLPKSKPTPSPKKRSVKVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RY28</accession>
    <name>A0A087RY28_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Lysine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Lysyl-tRNA synthetase</fullName>
            <shortName evidence="8">LysRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">lysS</name>
        <name evidence="10" type="ORF">AAA799P11_01095</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys)</text>
            <dbReference type="Rhea" id="RHEA:20792"/>
            <dbReference type="Rhea" id="RHEA-COMP:9696"/>
            <dbReference type="Rhea" id="RHEA-COMP:9697"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78529"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.6"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.6" evidence="8"/>
    <dbReference type="EMBL" id="JOSZ01000018">
        <property type="protein sequence ID" value="KFM18382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18382">
        <property type="protein sequence ID" value="KFM18382"/>
        <property type="gene ID" value="AAA799P11_01095"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1056"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004824">
        <property type="term" value="F:lysine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006430">
        <property type="term" value="P:lysyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00177">
        <property type="entry name" value="Lys_tRNA_synth_class1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045462">
        <property type="entry name" value="aa-tRNA-synth_I_cd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020751">
        <property type="entry name" value="aa-tRNA-synth_I_codon-bd_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008925">
        <property type="entry name" value="aa_tRNA-synth_I_cd-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002904">
        <property type="entry name" value="Lys-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37940">
        <property type="entry name" value="PTHR37940"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19269">
        <property type="entry name" value="Anticodon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01921">
        <property type="entry name" value="tRNA-synt_1f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48163">
        <property type="entry name" value="SSF48163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00467">
        <property type="entry name" value="lysS_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Anticodon_2" evidence="9">
        <location>
            <begin position="438"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="42"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="298"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="301"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF19269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="KFM18382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="529" mass="59796" checksum="19E1ADAE65BD4029" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYG4</accession>
    <name>A0A087RYG4_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UDP-N-acetyl-D-mannosamine dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.336</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">UDP-ManNAc 6-dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">AAA799P11_01088</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + 2 NAD(+) + UDP-N-acetyl-alpha-D-mannosamine = 3 H(+) + 2 NADH + UDP-N-acetyl-alpha-D-mannosaminouronate</text>
            <dbReference type="Rhea" id="RHEA:25780"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:68623"/>
            <dbReference type="ChEBI" id="CHEBI:70731"/>
            <dbReference type="EC" id="1.1.1.336"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.336" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000017">
        <property type="protein sequence ID" value="KFM18518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18518">
        <property type="protein sequence ID" value="KFM18518"/>
        <property type="gene ID" value="AAA799P11_01088"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0089714">
        <property type="term" value="F:UDP-N-acetyl-D-mannosamine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028359">
        <property type="entry name" value="UDP_ManNAc/GlcNAc_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500136">
        <property type="entry name" value="UDP_ManNAc_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="8">
        <location>
            <begin position="328"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="441" mass="48873" checksum="A3524C8E57735A58" modified="2014-10-29" version="1">MSNLKSQIKNEKKILAIYGLGNVGGPITAAWLRKGAKIIGVDISRKLLENIKKGTSHQKEPFISDIFSNALKKKKLTVTSDGILASKKSDIKFVAVPVGLKKNKIELNALLSATTSISKGLKKGDAVIICPSLPPGTTQKIVKDILEKNSKLKAEKDFSLIYNPERIFEGRALKDIEENYPAIVSGYGKKSLQFADELLKIISKKGTLKMDSMANAEAEKLFEGVYRDVNIALANELADYCQKIGVNFWDARKGANSQPFCHLHFPGTGVGGLCIPVYPRFIIESSSKIGKHVKLIEYSRKINDNMPKKCVQDALSLLKNKVKGSKVAVLGLGFRGEVTDSRLSPTYTVVNEFLKKGCTVTVHDPYIFEDDKLSKRVLLTKDLSEAVNKVDLIFISSDHKMYSKLDKKSITKANKPILIFDGRNILNKENFKKESIFTIGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RYL1</accession>
    <name>A0A087RYL1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Peptidase U62 modulator of DNA gyrase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">AAA799P11_01052</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase U62 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000016">
        <property type="protein sequence ID" value="KFM18565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18565">
        <property type="protein sequence ID" value="KFM18565"/>
        <property type="gene ID" value="AAA799P11_01052"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.1014"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045569">
        <property type="entry name" value="Metalloprtase-TldD/E_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002510">
        <property type="entry name" value="Metalloprtase-TldD/E_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025502">
        <property type="entry name" value="TldD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035068">
        <property type="entry name" value="TldD/PmbA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036059">
        <property type="entry name" value="TldD/PmbA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01523">
        <property type="entry name" value="PmbA_TldD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19289">
        <property type="entry name" value="PmbA_TldD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004919">
        <property type="entry name" value="TldD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111283">
        <property type="entry name" value="SSF111283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PmbA_TldD" evidence="3">
        <location>
            <begin position="24"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="PmbA_TldD_C" evidence="4">
        <location>
            <begin position="232"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF19289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="KFM18565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="473" mass="52889" checksum="5C4A505F83A70AA5" modified="2014-10-29" version="1">MDTQLQELADHTIEYSLDAGVQYCDVRAEEQERKSVLIENEEIEHVRSISDVGVGIRLIKDGTWSFCSITNPKSREQIKQAIEDSIKNSVHYAKNKKEKLNLYPNHTVKEKIDYPTLEKPDLEKLIKIGTECNKIISDTPKIIKSVVNPWYTNNSKYFTNSEGSKILQNFSDVVIDMVATAHESGLTQSVNITEGGRGGLEQITKNNKSQNSAQEIAQKASELLSAKPAKEEKATVVMNPDFVSLLTHEILGHPSEADRVLGKEMAWAGGAWWKGKIGEKIGSENLNVFDDPTIKESLGWYFFDDEGVQTKKTTLIEKGVLRNHMQNRETGQIFNQKPTGNMRATNFRFMPLIRMACTCIGNGDWGVDEMVKEVKNGYLISNMKTPSIDMKRYNWSISCQYAQKIEKGEVTDLLRDVIVMGTAPEFFKSIDACGNDFTVRPITNCGKGDPMQSMIMGNGGPSIRGVATVKSVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ26</accession>
    <name>A0A087RZ26_9ARCH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Histidine--tRNA ligase</fullName>
            <ecNumber evidence="3">6.1.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">hisS</name>
        <name evidence="9" type="ORF">AAA799P11_01020</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-histidine + tRNA(His) = AMP + diphosphate + H(+) + L-histidyl-tRNA(His)</text>
            <dbReference type="Rhea" id="RHEA:17313"/>
            <dbReference type="Rhea" id="RHEA-COMP:9665"/>
            <dbReference type="Rhea" id="RHEA-COMP:9689"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78527"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.21"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.21" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000015">
        <property type="protein sequence ID" value="KFM18730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18730">
        <property type="protein sequence ID" value="KFM18730"/>
        <property type="gene ID" value="AAA799P11_01020"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.986"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004821">
        <property type="term" value="F:histidine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006427">
        <property type="term" value="P:histidyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00773">
        <property type="entry name" value="HisRS-like_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015807">
        <property type="entry name" value="His-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041715">
        <property type="entry name" value="HisRS-like_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004516">
        <property type="entry name" value="HisRS/HisZ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43707">
        <property type="entry name" value="PTHR43707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13393">
        <property type="entry name" value="tRNA-synt_His"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001549">
        <property type="entry name" value="His-tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00442">
        <property type="entry name" value="hisS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="8">
        <location>
            <begin position="21"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="KFM18730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="427" mass="48500" checksum="CF989C2C601064E4" modified="2014-10-29" version="1">MELPRGMKDFEAIENSNIEHVRSHFKKLSNLYGFLFMEPSVLESLSTLETKSGPSIRDEIYYFKDKGDREVALRFDFTMGLTRYATAQKSMKLPAKISAFGGVFRYDEPQKGRYRYFHQWDIEVYGKKTLESEAEIIELTSRLFDSLLLKDIVIDINHRNLVESYINKIFETTDSDKVADILRAIDKIAKKSKDEILTEFTKKGYDTAKLEKILEFSQVKGTISEVEKNFDTEQLESWDELKQLFDSLENRGVSNVRINFGIVRGLDYYSGMVFEVFDKNSKLGALAGGGRYDTLTKAFGRDDIGATGVAGGVERIILTMQEQKIIPKILQNRVAVVYINEEMQKVAHSITSLLRLNNIPADIDLAGRNLKKQMDNAGNARYAIIVGPQELENGNVVLHDMKDGKEGTISLEKLTEDPNSVLNLEKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZ76</accession>
    <name>A0A087RZ76_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Vi polysaccharide biosynthesis protein VipB-TviC</fullName>
            <ecNumber evidence="2">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">vipB</name>
        <name evidence="2" type="ORF">AAA799P11_00989</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000014">
        <property type="protein sequence ID" value="KFM18780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18780">
        <property type="protein sequence ID" value="KFM18780"/>
        <property type="gene ID" value="AAA799P11_00989"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="302" mass="33867" checksum="4152BB832B0C6D92" modified="2014-10-29" version="1">MKFIVTGGSGFIGSHISRYLVKQNHEVIVIDDLRRGNLKNLQDIQDKINFQKINILNFEEMQKIAKNIDGIFHQAGLGSVPQSFKEPEEYHNVNAIGTENILKLAKQINCKVVYASSSSVYGNQTKFPISEDAKKNPLNPYGESKLQAEKFAQQYAQDGVKVIGLRYFNVFGIGQNPNYAGVIPKFIERLLDHKPPVIEGDGTQVRNFTYIDDVVRANWMAFASSVNHAFLNIATGITTSVNDLAKIMITLSGQKLEPEYVDSRPGDIKKSQADTSLAKKLIGWEPEFSLEEGLKEIFPKNW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZG0</accession>
    <name>A0A087RZG0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2OG-FeII oxygenase superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18864">
        <property type="protein sequence ID" value="KFM18864"/>
        <property type="gene ID" value="AAA799P11_00895"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044862">
        <property type="entry name" value="Pro_4_hyd_alph_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13640">
        <property type="entry name" value="2OG-FeII_Oxy_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="1">
        <location>
            <begin position="63"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="199" mass="23384" checksum="CC5E6B92188C4BF0" modified="2014-10-29" version="1" fragment="single">DHIGPFLMAHTTRKQEYFDSARKDKKKRQMIFSTETEPTAKIFSLFQKLFSEYMISTAKESKNEFSPYIIRIHKKGKSIPIHKDNVKYEGKEYELSKIDNQLSCILHLQESEKGGELVIYDKNWRKEDERFRKTDFGYYPKIISKSNFCRISNLKAGDLVIINPNYFHQVTKIEGESPRISLGMFVGIFKKQQQIVGWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZH8</accession>
    <name>A0A087RZH8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribosome-binding ATPase YchF protein</fullName>
            <ecNumber evidence="3">1.17.7.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ychF</name>
        <name evidence="3" type="ORF">AAA799P11_00913</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.7.1" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18882">
        <property type="protein sequence ID" value="KFM18882"/>
        <property type="gene ID" value="AAA799P11_00913"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.876"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046429">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013646">
        <property type="entry name" value="MMR_HSR1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08438">
        <property type="entry name" value="MMR_HSR1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="2">
        <location>
            <begin position="3"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="403" mass="44835" checksum="C82C12F357A6502E" modified="2014-10-29" version="1">MPIKLGLIGKTNTGKTTFFNSATLSSEEISSYPFTTKSPVSGIANAITLCVHPEFKIQDNPNNSKCVDGWRYIPIELIDLPGLIKDAWKGKGLGNQFLSIAAQSDALLHVVDASGGIDSTGKITEVGTGDPISDFADIEEELIMWYHKILEGNREKVSKLINSGSEFVDAVTDLYRGIGVNKSHVKESLVATGLEEKNFDEFDMVDSKKFASYLRKISKPTLIVANKIDVDGADKNFARLRERYNDSIVIPVSGDSEFSLRRAEQKGLIKYSPGSEQFEILKYEELNEKQIKALDFIKKGIMGEYMRTGVQFAINVAVFKLLKMNSIYPVVDETKLADKKGRILPDLILLKDGATINDLAREIHTDLTKGLLYGKDLRYNLRLPVDYQLRDRDVVSLVSAAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZI4</accession>
    <name>A0A087RZI4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Photosystem I assembly protein ycf3</fullName>
            <ecNumber evidence="3">6.2.1.30</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00919</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.30" evidence="3"/>
    <dbReference type="EMBL" id="JOSZ01000012">
        <property type="protein sequence ID" value="KFM18888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18888">
        <property type="protein sequence ID" value="KFM18888"/>
        <property type="gene ID" value="AAA799P11_00919"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.882"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047475">
        <property type="term" value="F:phenylacetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13176">
        <property type="entry name" value="TPR_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="34"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="102"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M10" evidence="2">
        <location>
            <begin position="405"/>
            <end position="469"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="478" mass="54776" checksum="2CBC4BADEC056DA3" modified="2014-10-29" version="1">MLNHFKKISCLLVISILSTQSITGISFAQTSEEPEIMFNQAMEFFSNGNYKQAITIYDEILEIAPNNISTLKMKGIAHSNIGDHKKSLEQFFTVLQHRPNDVISLAGMGVGFGNLGEYQEATSYFEKALKERPNSTVIKNYKEFIDKVVAKYPYTPTEKPQGLDKQPVSSIPEWVKPIAKWWATDGIDDSEFVSALIFMINNKIIQIPPVETQSNSEEKIPDWIKNNAGWWAEDQIDDDAFVQGIQYMIENGLIVIKVEETPQTQEELDHEFYLFTKYLRDISNNISKEKRYIEYPNPSQDVIKKFLRDYVKWNFEEEAKKASTSFPDPTYEIIDDTYIIYYKVYINEQPSGLPLDHVSTLSNSFTFWEEQELSTNNQKAKMKFEITDLKHEANVWVTWVVRNIGEGVLGHAHLGKGVVEVTLGDYNCDGSFQLYDVDSVEAIMTHELGHSIGLKHVDDKTSIMYPSFTPSYAYCLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZM1</accession>
    <name>A0A087RZM1_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc finger C2H2 type domain signature protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00866</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000011">
        <property type="protein sequence ID" value="KFM18925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18925">
        <property type="protein sequence ID" value="KFM18925"/>
        <property type="gene ID" value="AAA799P11_00866"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2H2-type" evidence="1">
        <location>
            <begin position="4"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="42" mass="4877" checksum="FDE6CF86DBDC8859" modified="2014-10-29" version="1">MPNCSVCGEICDNDIRLMNHMMEKHGWRNPNVGKPDRNSRGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZR4</accession>
    <name>A0A087RZR4_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18968">
        <property type="protein sequence ID" value="KFM18968"/>
        <property type="gene ID" value="AAA799P11_00820"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.783"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019204">
        <property type="entry name" value="DUF2070_membrane"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09843">
        <property type="entry name" value="DUF2070"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2070" evidence="2">
        <location>
            <begin position="15"/>
            <end position="577"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM18968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="581" mass="65129" checksum="5E6282CBC9659538" modified="2014-10-29" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS5</accession>
    <name>A0A087RZS5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sjogren's syndrome/scleroderma autoantigen 1 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00831</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18979">
        <property type="protein sequence ID" value="KFM18979"/>
        <property type="gene ID" value="AAA799P11_00831"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.798"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009563">
        <property type="entry name" value="SSSCA1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06677">
        <property type="entry name" value="Auto_anti-p27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM18979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="108" mass="12139" checksum="B4DDA35EA7C9C678" modified="2014-10-29" version="1">MSKDLTKKAAEMLLQGATLLSEPCPYCKGVRVMKDGHALCTSCGREPEKKEIPQVKQESESPLTATLEKKLTVLSKELEEEKDHAKQQEILKSINSLLETIEKTKNRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087RZS7</accession>
    <name>A0A087RZS7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Abortive infection protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00833</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000010">
        <property type="protein sequence ID" value="KFM18981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM18981">
        <property type="protein sequence ID" value="KFM18981"/>
        <property type="gene ID" value="AAA799P11_00833"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.800"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071586">
        <property type="term" value="P:CAAX-box protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003675">
        <property type="entry name" value="Rce1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02517">
        <property type="entry name" value="Rce1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="242"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="299"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM18981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="329" mass="36790" checksum="EBA0A19DCE183ABB" modified="2014-10-29" version="1">MQNQNKLLQAVGIPFTALLSVIFGLLLVSFPIGIFVVFESDIGDDINYDFPVTHLEIFQGTSVYQTASEISIGDVFVGLWIFYVVLFVIAILGPKTGFLKSFTSIISFGKYHTTSNYMVGVTKWLSILVLVSVLINFVQEQFGIVTVPPLDDNDLIQFFYVSLAPLIEEIGFRLILIGIPLFALYSHRSSAKYFFRCLWSPRNLDIHDSKKAILLIIFVGILFGFAHIAFAESWSEGKFAQAAAGGIILGWVYLRFGFVASLLIHWATNYFIFSYATFLSQINSISVENAFSHSLMSTLELLLLASGILSVVMIFLNRYSSKKESSLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S123</accession>
    <name>A0A087S123_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00751</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000008">
        <property type="protein sequence ID" value="KFM19427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19427">
        <property type="protein sequence ID" value="KFM19427"/>
        <property type="gene ID" value="AAA799P11_00751"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM19427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="102" mass="11769" checksum="2DE50E216E5EFD9F" modified="2014-10-29" version="1">MIQLSKGLSSKYVNVNILIQLRLANVGITLDSRNNLIERKNEYQLTYSEFIERLCVLYDYCKENHKPTFELLFLDPKKEKEEITSSLPNGFVIPEDAGVITT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1L7</accession>
    <name>A0A087S1L7_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Pre-mRNA processing ribonucleoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">AAA799P11_00610</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NOP5/NOP56 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000006">
        <property type="protein sequence ID" value="KFM19621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19621">
        <property type="protein sequence ID" value="KFM19621"/>
        <property type="gene ID" value="AAA799P11_00610"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.597"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031428">
        <property type="term" value="C:box C/D RNP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030515">
        <property type="term" value="F:snoRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045056">
        <property type="entry name" value="Nop56/Nop58"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042239">
        <property type="entry name" value="Nop_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002687">
        <property type="entry name" value="Nop_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036070">
        <property type="entry name" value="Nop_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012976">
        <property type="entry name" value="NOSIC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10894">
        <property type="entry name" value="PTHR10894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01798">
        <property type="entry name" value="Nop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00931">
        <property type="entry name" value="NOSIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89124">
        <property type="entry name" value="SSF89124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51358">
        <property type="entry name" value="NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0543">Viral nucleoprotein</keyword>
    <keyword evidence="4" id="KW-0946">Virion</keyword>
    <feature type="domain" description="Nop" evidence="3">
        <location>
            <begin position="176"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="294"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="294"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="KFM19621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="345" mass="38201" checksum="5A8C276F6FD4B995" modified="2014-10-29" version="1">MDDSELDRIQALKPQIIVDSGFASNPQDALGKLREFALGLSSSKVTEVSESPDLHIIQAINSLDEIDKIANALSSRLREWYGLHFPELDNVIDSINGYAQIVMAGKRESLTKQVFEDAGFPESKVEILSLIAAKSRGGDISDVNLAIVQSIAKQILDFHDLRKKLEEHVESEMETIAPNLSAILGTAVGARILGRAGSLKRLASLPASTIQVLGAEKALFRSLKTGSQPPKHGLLFQHAMVHAAPRWQRGKIARAIAAKAVIAARVDVYGEGLNKTLLEKLNVRVDEIGKKYENPTEKDTRRPESFRRDGGNFRDRRGRRDDRGGRRDSRPGSNKNKKRKKFGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S1X0</accession>
    <name>A0A087S1X0_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00464</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000005">
        <property type="protein sequence ID" value="KFM19724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19724">
        <property type="protein sequence ID" value="KFM19724"/>
        <property type="gene ID" value="AAA799P11_00464"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.444"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008969">
        <property type="entry name" value="CarboxyPept-like_regulatory"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49464">
        <property type="entry name" value="SSF49464"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="278"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="286"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="318" mass="36191" checksum="A1184CD301A4A4E7" modified="2014-10-29" version="1">MYKKVGIVGIFSFLMLFSAIQTSDAELWELIIDLNVEKGAIVSGETLVVTGKVVDHAYKPIRGAEVLIRTGSETTKAFTDPWGVFRGEFKDFERVPGTYTINVIATWYGMTGLETTQVQVKGDTSPVSLLQQKLDTEEARKYLSSEENDFEKDPIGQTLFKYYHGVLQELILENKEAMQPNEDQLFVEEQREIADELTEQAIEEYNPGNGVFEGLNYEDYVNSLDPEIQDIVSSQLNFTKNLFEEAQIVRSQIIAEGGTYEEAQQAYMEMLSIPKEKLEEFNDQKLEELENSEELENSSEESEDNSEESEDNSEEKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2C8</accession>
    <name>A0A087S2C8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cold shock-like protein CspLB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cspLB</name>
        <name evidence="3" type="ORF">AAA799P11_00416</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19882">
        <property type="protein sequence ID" value="KFM19882"/>
        <property type="gene ID" value="AAA799P11_00416"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.401"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM19882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="63" mass="7077" checksum="186E7321B4FBD01B" modified="2014-10-29" version="1">MEQGTVKWFNRTKGFGFIEREGGDDLFVHKTDVDGFINEGDKVEFEIGEGKKGPAAQKVKKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2E2</accession>
    <name>A0A087S2E2_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucosamine-phosphate N-acetyltransferase protein</fullName>
            <ecNumber evidence="2">2.3.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.4" evidence="2"/>
    <dbReference type="EMBL" id="JOSZ01000004">
        <property type="protein sequence ID" value="KFM19896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM19896">
        <property type="protein sequence ID" value="KFM19896"/>
        <property type="gene ID" value="AAA799P11_00435"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.415"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004343">
        <property type="term" value="F:glucosamine 6-phosphate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006048">
        <property type="term" value="P:UDP-N-acetylglucosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039143">
        <property type="entry name" value="GNPNAT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13355">
        <property type="entry name" value="PTHR13355"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM19896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="145" mass="16488" checksum="61F547678EEB74D2" modified="2014-10-29" version="1">MNNPKIRKLSIEDLQKGFLTTLDSLRKASNIDKNKAEEIFKKIDSNPDYTIAVAEIDGKIVGSTTLLIEQKFIHNGGRVGHIEDVVVDKNFQGQKIGEKIMKYLLEIAKNQGCYKTILDCTDDVKPFYEKLGFKQVANELRFDHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S3</accession>
    <name>A0A087S2S3_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00332</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20027">
        <property type="protein sequence ID" value="KFM20027"/>
        <property type="gene ID" value="AAA799P11_00332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="51" mass="6175" checksum="7BD9BBA0D4143A36" modified="2014-10-29" version="1">MTFQLTMQDIEKIISKIPKNSEFEEILQNLNEIRNGMFLTNRDIIYLRTRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2S8</accession>
    <name>A0A087S2S8_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00337</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20032">
        <property type="protein sequence ID" value="KFM20032"/>
        <property type="gene ID" value="AAA799P11_00337"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.331"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="95" mass="10557" checksum="35AF9C5471100180" modified="2014-10-29" version="1">MAKIGDKAFTITFIEDSDYTQGEQTTKGVKITTKETFEIDGNFVNKFHTTRVAIVKKFSNEKLRSDVNNGNSLGPVKCVSEKSASGKRFYNLVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S2T5</accession>
    <name>A0A087S2T5_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00349</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000003">
        <property type="protein sequence ID" value="KFM20039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20039">
        <property type="protein sequence ID" value="KFM20039"/>
        <property type="gene ID" value="AAA799P11_00349"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.338"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="99" mass="11557" checksum="83F2E6FC9AEF4E21" modified="2014-10-29" version="1">MPLTNNVIIKLNEITTMVEDKSKLSESEIEEIKSIFKELVESGERYDVDEIEFWFENEGSWKTRAPRIRIANLSNYIQDKHQQTAHLRVISDDDCSCGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S359</accession>
    <name>A0A087S359_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">AAA799P11_00239</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20163">
        <property type="protein sequence ID" value="KFM20163"/>
        <property type="gene ID" value="AAA799P11_00239"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.233"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="KFM20163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="90" mass="9920" checksum="77DB1FA58231E9DE" modified="2014-10-29" version="1">MAVKKKTTKRKTTTKKKAAPKKKAAPKKKAAPKKKATKSKAKKPAFGGYAISFAGRTETAEQIFGKKPIAPSEMTKKIWAFVKSKRLSNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S386</accession>
    <name>A0A087S386_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">AAA799P11_00266</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000002">
        <property type="protein sequence ID" value="KFM20190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20190">
        <property type="protein sequence ID" value="KFM20190"/>
        <property type="gene ID" value="AAA799P11_00266"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KFM20190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="67" mass="7770" checksum="62BE4E3B1C88336F" modified="2014-10-29" version="1">MQIPGGKKLKSQKIEYDFVNKETQTCCSNKPIYEITYFLGTKWLVCNECLDLDFFQAGIKEKVRISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-10-29" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A087S3K9</accession>
    <name>A0A087S3K9_9ARCH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Plastocyanin protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">AAA799P11_00060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Marine Group I thaumarchaeote SCGC AAA799-P11</name>
        <dbReference type="NCBI Taxonomy" id="1502295"/>
        <lineage>
            <taxon>Archaea</taxon>
            <taxon>Thaumarchaeota</taxon>
            <taxon>Thaumarchaeota incertae sedis</taxon>
            <taxon>Marine Group I</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2014-06" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Ngugi D.K."/>
                <person name="Blom J."/>
                <person name="Alam I."/>
                <person name="Rashid M."/>
                <person name="Baalawi W."/>
                <person name="Zhang G."/>
                <person name="Hikmawan T."/>
                <person name="Guan Y."/>
                <person name="Antunes A."/>
                <person name="Siam R."/>
                <person name="El-Dorry H."/>
                <person name="Bajic V."/>
                <person name="Stingl U."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">SCGC AAA799-P11</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="JOSZ01000001">
        <property type="protein sequence ID" value="KFM20313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="KFM20313">
        <property type="protein sequence ID" value="KFM20313"/>
        <property type="gene ID" value="AAA799P11_00060"/>
    </dbReference>
    <dbReference type="PATRIC" id="fig|1502295.3.peg.58"/>
    <dbReference type="Proteomes" id="UP000029387">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="303"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="Copper-bind" evidence="2">
        <location>
            <begin position="56"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="KFM20313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000029387"/>
        </source>
    </evidence>
    <sequence length="331" mass="37889" checksum="2F09752B11DB4DFF" modified="2014-10-29" version="1">MTVLDKIPRFFSRQVIFTISVLIIFFINVEQSYAEEFTINIPFGAFNPELNTPAEVWYDPPELTVKVGDTVTWYNDDREGHTVTSGNGAGRFDWMGSKNLGESDGIFDSGRFMPDESWSYTFEEEGSFNYFCVIHPWMEGIVFVDPFIPDYPHDATGKQVEFPILLITPDNSVEINFSWEPKIIKTHEKVNFIYRFYDAQTDQPLRKLEYDIAIIQNGIELYRDKNAVSQAGGDYRQWIFEEPGSVLIKIRDIRSFGKVAETTIDLSGSSVARLGDFSAVVYENTEQTKTVDKIVQPRQTVQFYYEIAVAIIAVPAIMLLAIIIYMKYKGA</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>