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<entry dataset="TrEMBL" created="2017-04-12" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A1P8YT63</accession>
    <name>A0A1P8YT63_9VIRU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Replication-associated protein</fullName>
        </recommendedName>
    </protein>
    <organism evidence="11 12">
        <name type="scientific">Thrips-associated genomovirus 3</name>
        <dbReference type="NCBI Taxonomy" id="1941237"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cressdnaviricota</taxon>
            <taxon>Repensiviricetes</taxon>
            <taxon>Geplafuvirales</taxon>
            <taxon>Genomoviridae</taxon>
            <taxon>Gemykibivirus</taxon>
            <taxon>Gemykibivirus echi1</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2016-12" db="EMBL/GenBank/DDBJ databases">
            <title>Genomes of genomoviruses identified in thrips.</title>
            <authorList>
                <person name="Varsani A."/>
                <person name="Kraberger S."/>
                <person name="Capobianco H.H."/>
                <person name="Alcala-Briseno R.I."/>
                <person name="Polston J.E."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">Thrp_197938</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the geminiviridae Rep protein family.</text>
    </comment>
    <dbReference type="EMBL" id="KY308269">
        <property type="protein sequence ID" value="AQA27279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_009345088.1">
        <property type="nucleotide sequence ID" value="NC_033742.1"/>
    </dbReference>
    <dbReference type="GeneID" id="30999656"/>
    <dbReference type="KEGG" id="vg:30999656"/>
    <dbReference type="Proteomes" id="UP000204144">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016888">
        <property type="term" value="F:endodeoxyribonuclease activity, producing 5'-phosphomonoesters"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001301">
        <property type="entry name" value="Gemini_AL1_CLV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022690">
        <property type="entry name" value="Gemini_AL1_REP_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022692">
        <property type="entry name" value="Gemini_AL1_REP_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00799">
        <property type="entry name" value="Gemini_AL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08283">
        <property type="entry name" value="Gemini_AL1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00228">
        <property type="entry name" value="GEMCOATCLVL1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0190">Covalent protein-DNA linkage</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gemini_AL1" evidence="9">
        <location>
            <begin position="3"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="Gemini_AL1_M" evidence="10">
        <location>
            <begin position="118"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="AQA27279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000204144"/>
        </source>
    </evidence>
    <sequence length="318" mass="35566" checksum="60BBB76D513E980A" modified="2017-04-12" version="1">MPFRFAAKYGLLTYPQCGDLDPWSVSDHLGRLGAECIIGREDHSDGGVHLHAFFMFERRFESRDVRVFDVEGRHPNVVRGYSTPSKGYAYATKDGDVVAGGLECPIDGASVSEASSKWARAILAESREEFFAIVAELDPRALCCSFGSLRAYADWKYRPVLDQYVTPAGISFCTDEVPQLHDWVQRNLAGSVVGRPRSLILIGETRLGKTLWARSLGKHAYFGGLFCLDESLEDVDYAVFDDMQGGLEFFHAYKFWLGAQSQFYATDKYKGKQLIHWGRPAIYCSNTTPLADKGADVDWLMGNCDIVHIDSPIFRANT</sequence>
</entry>
<entry dataset="TrEMBL" created="2017-04-12" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A1P8YT65</accession>
    <name>A0A1P8YT65_9VIRU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Capsid protein</fullName>
        </submittedName>
    </protein>
    <organism evidence="2 3">
        <name type="scientific">Thrips-associated genomovirus 3</name>
        <dbReference type="NCBI Taxonomy" id="1941237"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cressdnaviricota</taxon>
            <taxon>Repensiviricetes</taxon>
            <taxon>Geplafuvirales</taxon>
            <taxon>Genomoviridae</taxon>
            <taxon>Gemykibivirus</taxon>
            <taxon>Gemykibivirus echi1</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2016-12" db="EMBL/GenBank/DDBJ databases">
            <title>Genomes of genomoviruses identified in thrips.</title>
            <authorList>
                <person name="Varsani A."/>
                <person name="Kraberger S."/>
                <person name="Capobianco H.H."/>
                <person name="Alcala-Briseno R.I."/>
                <person name="Polston J.E."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">Thrp_197938</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="KY308269">
        <property type="protein sequence ID" value="AQA27277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_009345087.1">
        <property type="nucleotide sequence ID" value="NC_033742.1"/>
    </dbReference>
    <dbReference type="GeneID" id="30999658"/>
    <dbReference type="KEGG" id="vg:30999658"/>
    <dbReference type="Proteomes" id="UP000204144">
        <property type="component" value="Genome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AQA27277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000204144"/>
        </source>
    </evidence>
    <sequence length="296" mass="33630" checksum="60A6AD21BA8DBF94" modified="2017-04-12" version="1">MYRRRPSKRRSGGSRRTPRSSRRSYAKKTSYRRTRTVRKLTSRRRLLNITSQKKRDNMMPVTTDWTGQTPIPGPAVLNGAGRSTILWCATQRDRASTPYIDNSEAARTSKSIFLRGVREFASIRTNSPDAWRWRRIIFSVKGIFVYLPLESRFAVETSNQGWSRAIPDYSGSASTTARNALEALIFAGEAGKDWASVFTAKVDHSRITPLFDKTRILRSGNQQGSYFKNKLWLPVNKTLLYADEESGNNVQDGSLSAISRQGVGDIFIFDLFDCSTQNSASSLTFEPEATMYWHER</sequence>
</entry>
<entry dataset="TrEMBL" created="2017-04-12" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A1P8YT72</accession>
    <name>A0A1P8YT72_9VIRU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">RepA</fullName>
        </submittedName>
    </protein>
    <organism evidence="8 9">
        <name type="scientific">Thrips-associated genomovirus 3</name>
        <dbReference type="NCBI Taxonomy" id="1941237"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cressdnaviricota</taxon>
            <taxon>Repensiviricetes</taxon>
            <taxon>Geplafuvirales</taxon>
            <taxon>Genomoviridae</taxon>
            <taxon>Gemykibivirus</taxon>
            <taxon>Gemykibivirus echi1</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2016-12" db="EMBL/GenBank/DDBJ databases">
            <title>Genomes of genomoviruses identified in thrips.</title>
            <authorList>
                <person name="Varsani A."/>
                <person name="Kraberger S."/>
                <person name="Capobianco H.H."/>
                <person name="Alcala-Briseno R.I."/>
                <person name="Polston J.E."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">Thrp_197938</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the geminiviridae Rep protein family.</text>
    </comment>
    <dbReference type="EMBL" id="KY308269">
        <property type="protein sequence ID" value="AQA27278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_009345089.1">
        <property type="nucleotide sequence ID" value="NC_033742.1"/>
    </dbReference>
    <dbReference type="GeneID" id="30999657"/>
    <dbReference type="KEGG" id="vg:30999657"/>
    <dbReference type="Proteomes" id="UP000204144">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022690">
        <property type="entry name" value="Gemini_AL1_REP_cat-dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00799">
        <property type="entry name" value="Gemini_AL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gemini_AL1" evidence="7">
        <location>
            <begin position="3"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AQA27278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000204144"/>
        </source>
    </evidence>
    <sequence length="195" mass="21629" checksum="85B99880A33C3B56" modified="2017-04-12" version="1">MPFRFAAKYGLLTYPQCGDLDPWSVSDHLGRLGAECIIGREDHSDGGVHLHAFFMFERRFESRDVRVFDVEGRHPNVVRGYSTPSKGYAYATKDGDVVAGGLECPIDGASVSEASSKWARAILAESREEFFAIVAELDPRALCCSFGSLRAYADWKYRPVLDQYVTPAGISFCTDEVPQLHDWVQRNLAGSVVGE</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>