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<entry dataset="TrEMBL" created="2012-02-22" modified="2022-08-03" version="59" xmlns="http://uniprot.org/uniprot">
    <accession>G9I487</accession>
    <name>G9I487_9VIRU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Replicase large subunit</fullName>
        </recommendedName>
    </protein>
    <organism evidence="12 13">
        <name type="scientific">Clitoria yellow mottle virus</name>
        <dbReference type="NCBI Taxonomy" id="1128119"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Orthornavirae</taxon>
            <taxon>Kitrinoviricota</taxon>
            <taxon>Alsuviricetes</taxon>
            <taxon>Martellivirales</taxon>
            <taxon>Virgaviridae</taxon>
            <taxon>Tobamovirus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2011-08" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Wei K."/>
                <person name="Gibbs A.J."/>
                <person name="Maclenzie A.M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">Larrimah</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="JN566124">
        <property type="protein sequence ID" value="AEW50165.1"/>
        <property type="molecule type" value="Genomic_RNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_004956727.1">
        <property type="nucleotide sequence ID" value="NC_016519.1"/>
    </dbReference>
    <dbReference type="GeneID" id="11493379"/>
    <dbReference type="KEGG" id="vg:11493379"/>
    <dbReference type="Proteomes" id="UP000201821">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008174">
        <property type="term" value="F:mRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003968">
        <property type="term" value="F:RNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0039694">
        <property type="term" value="P:viral RNA genome replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027351">
        <property type="entry name" value="(+)RNA_virus_helicase_core_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002588">
        <property type="entry name" value="Alphavirus-like_MT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007094">
        <property type="entry name" value="RNA-dir_pol_PSvirus"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001788">
        <property type="entry name" value="Tymovirus_RNA-dep_RNA_pol"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00978">
        <property type="entry name" value="RdRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01443">
        <property type="entry name" value="Viral_helicase1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01660">
        <property type="entry name" value="Vmethyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51743">
        <property type="entry name" value="ALPHAVIRUS_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51657">
        <property type="entry name" value="PSRV_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50507">
        <property type="entry name" value="RDRP_SSRNA_POS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="3" id="KW-0941">Suppressor of RNA silencing</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0693">Viral RNA replication</keyword>
    <feature type="domain" description="Alphavirus-like MT" evidence="11">
        <location>
            <begin position="69"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="(+)RNA virus helicase C-terminal" evidence="10">
        <location>
            <begin position="820"/>
            <end position="1133"/>
        </location>
    </feature>
    <feature type="domain" description="RdRp catalytic" evidence="9">
        <location>
            <begin position="1400"/>
            <end position="1513"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="AEW50165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000201821"/>
        </source>
    </evidence>
    <sequence length="1633" mass="186322" checksum="234449171AE7AE85" modified="2012-02-22" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2012-02-22" modified="2022-05-25" version="51" xmlns="http://uniprot.org/uniprot">
    <accession>G9I488</accession>
    <name>G9I488_9VIRU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Replicase</fullName>
        </submittedName>
    </protein>
    <organism evidence="3 4">
        <name type="scientific">Clitoria yellow mottle virus</name>
        <dbReference type="NCBI Taxonomy" id="1128119"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Orthornavirae</taxon>
            <taxon>Kitrinoviricota</taxon>
            <taxon>Alsuviricetes</taxon>
            <taxon>Martellivirales</taxon>
            <taxon>Virgaviridae</taxon>
            <taxon>Tobamovirus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2011-08" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Wei K."/>
                <person name="Gibbs A.J."/>
                <person name="Maclenzie A.M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">Larrimah</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="JN566124">
        <property type="protein sequence ID" value="AEW50164.1"/>
        <property type="molecule type" value="Genomic_RNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_004956728.1">
        <property type="nucleotide sequence ID" value="NC_016519.1"/>
    </dbReference>
    <dbReference type="GeneID" id="11493380"/>
    <dbReference type="KEGG" id="vg:11493380"/>
    <dbReference type="Proteomes" id="UP000201821">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008174">
        <property type="term" value="F:mRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027351">
        <property type="entry name" value="(+)RNA_virus_helicase_core_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002588">
        <property type="entry name" value="Alphavirus-like_MT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01443">
        <property type="entry name" value="Viral_helicase1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01660">
        <property type="entry name" value="Vmethyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51743">
        <property type="entry name" value="ALPHAVIRUS_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51657">
        <property type="entry name" value="PSRV_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alphavirus-like MT" evidence="2">
        <location>
            <begin position="69"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="(+)RNA virus helicase C-terminal" evidence="1">
        <location>
            <begin position="820"/>
            <end position="1133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="AEW50164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000201821"/>
        </source>
    </evidence>
    <sequence length="1133" mass="128371" checksum="FC93B3AFE5520B81" modified="2012-02-22" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2012-02-22" modified="2022-08-03" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>G9I489</accession>
    <name>G9I489_9VIRU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Movement protein</fullName>
        </submittedName>
    </protein>
    <organism evidence="2 3">
        <name type="scientific">Clitoria yellow mottle virus</name>
        <dbReference type="NCBI Taxonomy" id="1128119"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Orthornavirae</taxon>
            <taxon>Kitrinoviricota</taxon>
            <taxon>Alsuviricetes</taxon>
            <taxon>Martellivirales</taxon>
            <taxon>Virgaviridae</taxon>
            <taxon>Tobamovirus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2011-08" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Wei K."/>
                <person name="Gibbs A.J."/>
                <person name="Maclenzie A.M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">Larrimah</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="JN566124">
        <property type="protein sequence ID" value="AEW50166.1"/>
        <property type="molecule type" value="Genomic_RNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_004956729.1">
        <property type="nucleotide sequence ID" value="NC_016519.1"/>
    </dbReference>
    <dbReference type="GeneID" id="11493381"/>
    <dbReference type="KEGG" id="vg:11493381"/>
    <dbReference type="Proteomes" id="UP000201821">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028919">
        <property type="entry name" value="Viral_movement"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01107">
        <property type="entry name" value="MP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="274"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="AEW50166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000201821"/>
        </source>
    </evidence>
    <sequence length="296" mass="32654" checksum="13FFD75F8964CD90" modified="2012-02-22" version="1">MSEVSKVESLLAPSKFVKISMSDKFKWKTPSRICTIVQSDTISMTGNGRQLFSFDVLKDSLKFAEEFIYMDLLGITLTGQWLLPKGTPGAAEVILLDSRLKGRASVLSVFKCVAADQEFQFLLKPGYSIACEDAKKSPFELVCNVTDLPVKQGFVPLSVEIACLVQFSNCVLTRSLTRKLGSKPNEKQFAVEEVDELMGSMTTLKQIEGLRRTKKDVVDSAVVQSYKVGKDIRPLPSEKVGRANSGFGPKKTKKKEIKVDLNKVRSGLSDMEFSDEASVNNDADSVIDHGLSYSET</sequence>
</entry>
<entry dataset="TrEMBL" created="2012-02-22" modified="2022-05-25" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>G9I490</accession>
    <name>G9I490_9VIRU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Capsid protein</fullName>
        </recommendedName>
    </protein>
    <organism evidence="6 7">
        <name type="scientific">Clitoria yellow mottle virus</name>
        <dbReference type="NCBI Taxonomy" id="1128119"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Orthornavirae</taxon>
            <taxon>Kitrinoviricota</taxon>
            <taxon>Alsuviricetes</taxon>
            <taxon>Martellivirales</taxon>
            <taxon>Virgaviridae</taxon>
            <taxon>Tobamovirus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2011-08" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Wei K."/>
                <person name="Gibbs A.J."/>
                <person name="Maclenzie A.M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">Larrimah</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Capsid protein self-assembles to form rod-shaped virions about 18 nm in diameter with a central canal enclosing the viral genomic RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the virgaviridae capsid protein family.</text>
    </comment>
    <dbReference type="EMBL" id="JN566124">
        <property type="protein sequence ID" value="AEW50167.1"/>
        <property type="molecule type" value="Genomic_RNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_004956730.1">
        <property type="nucleotide sequence ID" value="NC_016519.1"/>
    </dbReference>
    <dbReference type="GeneID" id="11493382"/>
    <dbReference type="KEGG" id="vg:11493382"/>
    <dbReference type="Proteomes" id="UP000201821">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019029">
        <property type="term" value="C:helical viral capsid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001337">
        <property type="entry name" value="TMV-like_coat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036417">
        <property type="entry name" value="TMV-like_coat_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00721">
        <property type="entry name" value="TMV_coat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47195">
        <property type="entry name" value="SSF47195"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="4" id="KW-1139">Helical capsid protein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0946">Virion</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="AEW50167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000201821"/>
        </source>
    </evidence>
    <sequence length="163" mass="17962" checksum="39BD3144CC3195B8" modified="2012-02-22" version="1">MAYHTPRPNQLVYFTNAFAEYFGFVNSLQKARVNSFQTQAGRDQLREVLVNSQVSVASPTVRFPENSFYVSFVDASVSTVYNALLQSTDTRNRVIEVENSSSVSTTEQINAVRRTDDASTAIHNNLDQLLNLLAAGTGVLDRQSFESTSGLTWTAQGALRATT</sequence>
</entry>
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Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>