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<entry dataset="TrEMBL" created="2010-03-23" modified="2020-08-12" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>D3IZT0</accession>
    <name>D3IZT0_9POLY</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative agnoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">agno</name>
    </gene>
    <organism evidence="1 5">
        <name type="scientific">California sea lion polyomavirus 1</name>
        <dbReference type="NCBI Taxonomy" id="715223"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cossaviricota</taxon>
            <taxon>Papovaviricetes</taxon>
            <taxon>Sepolyvirales</taxon>
            <taxon>Polyomaviridae</taxon>
            <taxon>Betapolyomavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 5" key="1">
        <citation type="journal article" date="2010" name="J. Vet. Diagn. Invest." volume="22" first="628" last="632">
            <title>Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma.</title>
            <authorList>
                <person name="Colegrove K.M."/>
                <person name="Wellehan J.F.Jr."/>
                <person name="Rivera R."/>
                <person name="Moore P.F."/>
                <person name="Gulland F.M."/>
                <person name="Lowenstine L.J."/>
                <person name="Nordhausen R.W."/>
                <person name="Nollens H.H."/>
            </authorList>
            <dbReference type="PubMed" id="20622238"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1">CSL6994</strain>
        </source>
    </reference>
    <reference evidence="3" key="2">
        <citation type="submission" date="2010-04" db="EMBL/GenBank/DDBJ databases">
            <title>Characterization of California sea lion polyomavirus 1: expansion of the known host range of the Polyomaviridae to Carnivora.</title>
            <authorList>
                <person name="Wellehan J.F.X.Jr."/>
                <person name="Rivera R."/>
                <person name="Archer L.L."/>
                <person name="Benham C."/>
                <person name="Muller J.K."/>
                <person name="Colegrove K.M."/>
                <person name="Gulland F.M.D."/>
                <person name="StLeger J.A."/>
                <person name="Venn-Watson S.K."/>
                <person name="Nollens H.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <strain evidence="3">Buc-Kid</strain>
            <strain evidence="4">Uni-Ton</strain>
        </source>
    </reference>
    <reference evidence="2" key="3">
        <citation type="submission" date="2010-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Wellehan J.F.X.Jr."/>
                <person name="Rivera R."/>
                <person name="Archer L.L."/>
                <person name="Benham C."/>
                <person name="Muller J.K."/>
                <person name="Colegrove K.M."/>
                <person name="Gulland F.M.D."/>
                <person name="StLeger J.A."/>
                <person name="Venn-Watson S.K."/>
                <person name="Nollens H.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <strain evidence="2">Lev-liv</strain>
        </source>
    </reference>
    <reference evidence="2" key="4">
        <citation type="journal article" date="2011" name="Infect. Genet. Evol." volume="11" first="987" last="996">
            <title>Characterization of California sea lion polyomavirus 1: expansion of the known host range of the Polyomaviridae to Carnivora.</title>
            <authorList>
                <person name="Wellehan J.F.Jr."/>
                <person name="Rivera R."/>
                <person name="Archer L.L."/>
                <person name="Benham C."/>
                <person name="Muller J.K."/>
                <person name="Colegrove K.M."/>
                <person name="Gulland F.M."/>
                <person name="St Leger J.A."/>
                <person name="Venn-Watson S.K."/>
                <person name="Nollens H.H."/>
            </authorList>
            <dbReference type="PubMed" id="21453794"/>
            <dbReference type="DOI" id="10.1016/j.meegid.2011.03.010"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <strain evidence="2">Lev-liv</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="GQ331138">
        <property type="protein sequence ID" value="ADC34414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="HM130529">
        <property type="protein sequence ID" value="ADK22088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="HM130530">
        <property type="protein sequence ID" value="ADK22091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="HM130531">
        <property type="protein sequence ID" value="ADK22094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_003429319.1">
        <property type="nucleotide sequence ID" value="NC_013796.1"/>
    </dbReference>
    <dbReference type="GeneID" id="9680164"/>
    <dbReference type="KEGG" id="vg:9680164"/>
    <dbReference type="Proteomes" id="UP000171487">
        <property type="component" value="Genome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ADC34414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ADK22088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ADK22091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ADK22094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000171487"/>
        </source>
    </evidence>
    <sequence length="50" mass="5285" checksum="60A6ADEB9AA36DB0" modified="2010-03-23" version="1">MKKILRLALCPDGVRLPACPGFAYWAVAPPSAGPFGPQPLLLLTRGAQPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2010-03-23" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>D3IZT1</accession>
    <name>D3IZT1_9POLY</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Minor capsid protein</fullName>
        </recommendedName>
    </protein>
    <organism evidence="13 14">
        <name type="scientific">California sea lion polyomavirus 1</name>
        <dbReference type="NCBI Taxonomy" id="715223"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cossaviricota</taxon>
            <taxon>Papovaviricetes</taxon>
            <taxon>Sepolyvirales</taxon>
            <taxon>Polyomaviridae</taxon>
            <taxon>Betapolyomavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2010" name="J. Vet. Diagn. Invest." volume="22" first="628" last="632">
            <title>Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma.</title>
            <authorList>
                <person name="Colegrove K.M."/>
                <person name="Wellehan J.F.Jr."/>
                <person name="Rivera R."/>
                <person name="Moore P.F."/>
                <person name="Gulland F.M."/>
                <person name="Lowenstine L.J."/>
                <person name="Nordhausen R.W."/>
                <person name="Nollens H.H."/>
            </authorList>
            <dbReference type="PubMed" id="20622238"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CSL6994</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Endoplasmic reticulum membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="4">Host endoplasmic reticulum membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Virion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">Belongs to the polyomaviruses capsid protein VP2 family.</text>
    </comment>
    <dbReference type="EMBL" id="GQ331138">
        <property type="protein sequence ID" value="ADC34410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_003429320.1">
        <property type="nucleotide sequence ID" value="NC_013796.1"/>
    </dbReference>
    <dbReference type="GeneID" id="9680163"/>
    <dbReference type="KEGG" id="vg:9680163"/>
    <dbReference type="Proteomes" id="UP000171487">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044167">
        <property type="term" value="C:host cell endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019028">
        <property type="term" value="C:viral capsid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001070">
        <property type="entry name" value="Polyoma_coat_VP2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00761">
        <property type="entry name" value="Polyoma_coat2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003377">
        <property type="entry name" value="Polyoma_coat2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="9" id="KW-1038">Host endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-1043">Host membrane</keyword>
    <keyword evidence="7" id="KW-0426">Late protein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0946">Virion</keyword>
    <keyword evidence="10" id="KW-1160">Virus entry into host cell</keyword>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="298"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="12">
        <location>
            <begin position="322"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR003377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADC34410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000171487"/>
        </source>
    </evidence>
    <sequence length="340" mass="37473" checksum="FFF99290629551A9" modified="2010-03-23" version="1">MGALISVITELFGLAAATGFTTEAILSGEAAAAIEGLLDEVAYVSLVDGVTDLQALESFGISEELFNLYLDIPRGASEVLASLGEAAKGSIGEFGVLALSIAGASLSPLSYTQAVPDMALQVWVPDVDYLFPGVSTFARYAQYLDPTYWGPDLLNHVSRLFWQSLLSEGRRQIGHASRDLATTVGGTVQESLARFFENTRWAVSHVTGDWYAALHRYYGELPPLNPPQLSQLRKRIQRETGIDVAEEDKSHRPSANFVQKYSPPGGAGQRHAPDWLLPLLLGLYGDLTPTWKKEVEELEEIETEDEEDIPKKKQRSASLPGAKTPHKRRNRSVRRPNRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2010-03-23" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>D3IZT2</accession>
    <name>D3IZT2_9POLY</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Minor capsid protein</fullName>
        </recommendedName>
    </protein>
    <organism evidence="13 14">
        <name type="scientific">California sea lion polyomavirus 1</name>
        <dbReference type="NCBI Taxonomy" id="715223"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cossaviricota</taxon>
            <taxon>Papovaviricetes</taxon>
            <taxon>Sepolyvirales</taxon>
            <taxon>Polyomaviridae</taxon>
            <taxon>Betapolyomavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="journal article" date="2010" name="J. Vet. Diagn. Invest." volume="22" first="628" last="632">
            <title>Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma.</title>
            <authorList>
                <person name="Colegrove K.M."/>
                <person name="Wellehan J.F.Jr."/>
                <person name="Rivera R."/>
                <person name="Moore P.F."/>
                <person name="Gulland F.M."/>
                <person name="Lowenstine L.J."/>
                <person name="Nordhausen R.W."/>
                <person name="Nollens H.H."/>
            </authorList>
            <dbReference type="PubMed" id="20622238"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CSL6994</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Endoplasmic reticulum membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="4">Host endoplasmic reticulum membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Virion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">Belongs to the polyomaviruses capsid protein VP2 family.</text>
    </comment>
    <dbReference type="EMBL" id="GQ331138">
        <property type="protein sequence ID" value="ADC34411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_003429321.1">
        <property type="nucleotide sequence ID" value="NC_013796.1"/>
    </dbReference>
    <dbReference type="GeneID" id="9680160"/>
    <dbReference type="KEGG" id="vg:9680160"/>
    <dbReference type="Proteomes" id="UP000171487">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044167">
        <property type="term" value="C:host cell endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019028">
        <property type="term" value="C:viral capsid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001070">
        <property type="entry name" value="Polyoma_coat_VP2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00761">
        <property type="entry name" value="Polyoma_coat2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003377">
        <property type="entry name" value="Polyoma_coat2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="9" id="KW-1038">Host endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-1043">Host membrane</keyword>
    <keyword evidence="7" id="KW-0426">Late protein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0946">Virion</keyword>
    <keyword evidence="10" id="KW-1160">Virus entry into host cell</keyword>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="126"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="181"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="12">
        <location>
            <begin position="205"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR003377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ADC34411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000171487"/>
        </source>
    </evidence>
    <sequence length="223" mass="25696" checksum="CA12CB1DC295DA3D" modified="2010-03-23" version="1">MALQVWVPDVDYLFPGVSTFARYAQYLDPTYWGPDLLNHVSRLFWQSLLSEGRRQIGHASRDLATTVGGTVQESLARFFENTRWAVSHVTGDWYAALHRYYGELPPLNPPQLSQLRKRIQRETGIDVAEEDKSHRPSANFVQKYSPPGGAGQRHAPDWLLPLLLGLYGDLTPTWKKEVEELEEIETEDEEDIPKKKQRSASLPGAKTPHKRRNRSVRRPNRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2010-03-23" modified="2022-05-25" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>D3IZT3</accession>
    <name>D3IZT3_9POLY</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Major capsid protein VP1</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Major structural protein VP1</fullName>
        </alternativeName>
    </protein>
    <organism evidence="11 12">
        <name type="scientific">California sea lion polyomavirus 1</name>
        <dbReference type="NCBI Taxonomy" id="715223"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cossaviricota</taxon>
            <taxon>Papovaviricetes</taxon>
            <taxon>Sepolyvirales</taxon>
            <taxon>Polyomaviridae</taxon>
            <taxon>Betapolyomavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="journal article" date="2010" name="J. Vet. Diagn. Invest." volume="22" first="628" last="632">
            <title>Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma.</title>
            <authorList>
                <person name="Colegrove K.M."/>
                <person name="Wellehan J.F.Jr."/>
                <person name="Rivera R."/>
                <person name="Moore P.F."/>
                <person name="Gulland F.M."/>
                <person name="Lowenstine L.J."/>
                <person name="Nordhausen R.W."/>
                <person name="Nollens H.H."/>
            </authorList>
            <dbReference type="PubMed" id="20622238"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CSL6994</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Host nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Virion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the polyomaviruses coat protein VP1 family.</text>
    </comment>
    <dbReference type="EMBL" id="GQ331138">
        <property type="protein sequence ID" value="ADC34409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_003429322.1">
        <property type="nucleotide sequence ID" value="NC_013796.1"/>
    </dbReference>
    <dbReference type="GeneID" id="9680161"/>
    <dbReference type="KEGG" id="vg:9680161"/>
    <dbReference type="Proteomes" id="UP000171487">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042025">
        <property type="term" value="C:host cell nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019028">
        <property type="term" value="C:viral capsid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.175.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000662">
        <property type="entry name" value="Capsid_VP1_Polyomavir"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011222">
        <property type="entry name" value="dsDNA_vir_gr_I_capsid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036931">
        <property type="entry name" value="Polyomavir_VP1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00718">
        <property type="entry name" value="Polyoma_coat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88648">
        <property type="entry name" value="SSF88648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0945">Host-virus interaction</keyword>
    <keyword evidence="8" id="KW-0426">Late protein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0946">Virion</keyword>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="392"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="10">
        <location>
            <begin position="393"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="475"/>
            <end position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00032469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ADC34409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000171487"/>
        </source>
    </evidence>
    <sequence length="495" mass="54201" checksum="C77C851D0BC916E7" modified="2010-03-23" version="1">MKRTFPKRSKGAPPSQVPKLLIKGGIEVLDVRTGGDSITTIELFLNPRVGTPTEHEFGFSGKLTVATSDDDDKPGPSELPCYSLGKVQLPMLNEDMTGEKILMWEAVSCKTEVVGVGSLCNVHSLRKRIHGDTTSSAASQPIVGLNYHFFSVGGEPLQLQFLTENYKTKYEKYAAPVGPLTGLAQVLDPRLKGILDKDGLYPVECWHPDPAKNENSRYFGTYTGGTETPPVMQITNSMTTILLDENGVGPLCKGDNLFLSCCDIAGFKYENANAMKFRGFPRYFSVTLRKRQVKNPYPVGSLLNSLFNKLTPEVDSQPMLGEHSQVEEVRVYQGTEPLPGDPDLERYIDKYGQQETKVPDEKSLIMEINKLQARLQYVRQTRGSRGPLEVVTFPYKDPPPPPPASPQPPPILSGHARGPLLTVEDSRDLPGLEGENRVGVISGHRSPRPLPALEGDNTGVISGHATGPLETIEDSDDATPSTVTHSNVVEFSMES</sequence>
</entry>
<entry dataset="TrEMBL" created="2010-03-23" modified="2022-08-03" version="57" xmlns="http://uniprot.org/uniprot">
    <accession>D3IZT4</accession>
    <name>D3IZT4_9POLY</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Large T antigen</fullName>
        </recommendedName>
    </protein>
    <organism evidence="29 30">
        <name type="scientific">California sea lion polyomavirus 1</name>
        <dbReference type="NCBI Taxonomy" id="715223"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cossaviricota</taxon>
            <taxon>Papovaviricetes</taxon>
            <taxon>Sepolyvirales</taxon>
            <taxon>Polyomaviridae</taxon>
            <taxon>Betapolyomavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="29 30" key="1">
        <citation type="journal article" date="2010" name="J. Vet. Diagn. Invest." volume="22" first="628" last="632">
            <title>Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma.</title>
            <authorList>
                <person name="Colegrove K.M."/>
                <person name="Wellehan J.F.Jr."/>
                <person name="Rivera R."/>
                <person name="Moore P.F."/>
                <person name="Gulland F.M."/>
                <person name="Lowenstine L.J."/>
                <person name="Nordhausen R.W."/>
                <person name="Nollens H.H."/>
            </authorList>
            <dbReference type="PubMed" id="20622238"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="29">CSL6994</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Host nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="GQ331138">
        <property type="protein sequence ID" value="ADC34413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_003429323.1">
        <property type="nucleotide sequence ID" value="NC_013796.1"/>
    </dbReference>
    <dbReference type="GeneID" id="9680159"/>
    <dbReference type="KEGG" id="vg:9680159"/>
    <dbReference type="Proteomes" id="UP000171487">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003688">
        <property type="term" value="F:DNA replication origin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0039645">
        <property type="term" value="P:modulation by virus of host G1/S transition checkpoint"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0039576">
        <property type="term" value="P:suppression by virus of host JAK-STAT cascade via inhibition of JAK1 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0039502">
        <property type="term" value="P:suppression by virus of host type I interferon-mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014015">
        <property type="entry name" value="Helicase_SF3_DNA-vir"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016392">
        <property type="entry name" value="Lg_T_Ag_polyomavir"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010932">
        <property type="entry name" value="Lg_T_Ag_Polyomavir_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003133">
        <property type="entry name" value="T_Ag_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017910">
        <property type="entry name" value="Znf_lg_T-Ag_D1-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037102">
        <property type="entry name" value="Znf_lg_T-Ag_D1_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06431">
        <property type="entry name" value="Polyoma_lg_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02217">
        <property type="entry name" value="T_Ag_DNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003368">
        <property type="entry name" value="Large_T_antigen_polyomaV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51206">
        <property type="entry name" value="SF3_HELICASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51287">
        <property type="entry name" value="T_AG_OBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51341">
        <property type="entry name" value="ZF_LTAG_D1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="17" id="KW-0007">Acetylation</keyword>
    <keyword evidence="16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="18 22" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0244">Early protein</keyword>
    <keyword evidence="20" id="KW-1078">G1/S host cell cycle checkpoint dysregulation by virus</keyword>
    <keyword evidence="7" id="KW-1048">Host nucleus</keyword>
    <keyword evidence="8" id="KW-0945">Host-virus interaction</keyword>
    <keyword evidence="13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1090">Inhibition of host innate immune response by virus</keyword>
    <keyword evidence="14" id="KW-1114">Inhibition of host interferon signaling pathway by virus</keyword>
    <keyword evidence="21" id="KW-1096">Inhibition of host JAK1 by virus</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1121">Modulation of host cell cycle by virus</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="30" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="19" id="KW-0899">Viral immunoevasion</keyword>
    <keyword evidence="15" id="KW-0862">Zinc</keyword>
    <keyword evidence="12 23" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="25">
        <location>
            <begin position="12"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="T-ag OBD" evidence="27">
        <location>
            <begin position="142"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="T-ag D1-type" evidence="28">
        <location>
            <begin position="262"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="SF3 helicase" evidence="26">
        <location>
            <begin position="397"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="T-ag OBD" evidence="22">
        <location>
            <begin position="142"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="24">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="24">
        <location>
            <begin position="623"/>
            <end position="662"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="24">
        <location>
            <begin position="638"/>
            <end position="662"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00023309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00023318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00620"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="26">
        <source>
            <dbReference type="PROSITE" id="PS51206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="27">
        <source>
            <dbReference type="PROSITE" id="PS51287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="28">
        <source>
            <dbReference type="PROSITE" id="PS51341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="29">
        <source>
            <dbReference type="EMBL" id="ADC34413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="30">
        <source>
            <dbReference type="Proteomes" id="UP000171487"/>
        </source>
    </evidence>
    <sequence length="662" mass="76364" checksum="7A748282443DA605" modified="2010-03-23" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2010-03-23" modified="2022-08-03" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>D3IZT5</accession>
    <name>D3IZT5_9POLY</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Small t antigen</fullName>
        </recommendedName>
    </protein>
    <organism evidence="17 18">
        <name type="scientific">California sea lion polyomavirus 1</name>
        <dbReference type="NCBI Taxonomy" id="715223"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Monodnaviria</taxon>
            <taxon>Shotokuvirae</taxon>
            <taxon>Cossaviricota</taxon>
            <taxon>Papovaviricetes</taxon>
            <taxon>Sepolyvirales</taxon>
            <taxon>Polyomaviridae</taxon>
            <taxon>Betapolyomavirus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="journal article" date="2010" name="J. Vet. Diagn. Invest." volume="22" first="628" last="632">
            <title>Polyomavirus infection in a free-ranging California sea lion (Zalophus californianus) with intestinal T-cell lymphoma.</title>
            <authorList>
                <person name="Colegrove K.M."/>
                <person name="Wellehan J.F.Jr."/>
                <person name="Rivera R."/>
                <person name="Moore P.F."/>
                <person name="Gulland F.M."/>
                <person name="Lowenstine L.J."/>
                <person name="Nordhausen R.W."/>
                <person name="Nollens H.H."/>
            </authorList>
            <dbReference type="PubMed" id="20622238"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CSL6994</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Host cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Host nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="GQ331138">
        <property type="protein sequence ID" value="ADC34412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="YP_003429324.1">
        <property type="nucleotide sequence ID" value="NC_013796.1"/>
    </dbReference>
    <dbReference type="GeneID" id="9680162"/>
    <dbReference type="KEGG" id="vg:9680162"/>
    <dbReference type="Proteomes" id="UP000171487">
        <property type="component" value="Genome"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030430">
        <property type="term" value="C:host cell cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1860">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003354">
        <property type="entry name" value="Papo_T_antigen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036092">
        <property type="entry name" value="Papo_T_antigensf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02380">
        <property type="entry name" value="Papo_T_antigen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161240">
        <property type="entry name" value="SSF161240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11" id="KW-0007">Acetylation</keyword>
    <keyword evidence="13" id="KW-0010">Activator</keyword>
    <keyword evidence="6" id="KW-0244">Early protein</keyword>
    <keyword evidence="15" id="KW-1035">Host cytoplasm</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14" id="KW-0804">Transcription</keyword>
    <keyword evidence="12" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="16">
        <location>
            <begin position="12"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ADC34412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000171487"/>
        </source>
    </evidence>
    <sequence length="186" mass="22200" checksum="B4269E0C5A4D4C25" modified="2010-03-23" version="1">MDRALNRKESRELMNLLGLPMSYYGHLPIMRKAFIQKSKEYHPDKGGDEDKCKKLTCLYRKLEDNIQKNKDYEDMWGNAGPSWRSNEVSNEEKIGRGQEFWKNFDLCVRGVNRRCPCFMCKLKRRHIWRLQETRKPNCWGKCYCYTCYCLWFGFEEKNPSSGLVWIGMISELTWGDIMVSNSIYIF</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>