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<entry dataset="Swiss-Prot" created="2011-09-21" modified="2021-09-29" version="70" xmlns="http://uniprot.org/uniprot">
    <accession>Q06388-2</accession>
    <name>CAPSD_SBWMN</name>
    <protein>
        <recommendedName>
            <fullName>Isoform N-CP of Capsid protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName>Coat protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName>P19</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name type="primary">CP</name>
    </gene>
    <organism>
        <name type="scientific">Soil-borne wheat mosaic virus (strain United States/Nebraska/1981)</name>
        <name type="common">SBWMV</name>
        <dbReference type="NCBI Taxonomy" id="652673"/>
        <lineage>
            <taxon>Viruses</taxon>
            <taxon>Riboviria</taxon>
            <taxon>Orthornavirae</taxon>
            <taxon>Kitrinoviricota</taxon>
            <taxon>Alsuviricetes</taxon>
            <taxon>Martellivirales</taxon>
            <taxon>Virgaviridae</taxon>
            <taxon>Furovirus</taxon>
        </lineage>
    </organism>
    <organismHost>
        <name type="scientific">Hordeum vulgare</name>
        <name type="common">Barley</name>
        <dbReference type="NCBI Taxonomy" id="4513"/>
    </organismHost>
    <organismHost>
        <name type="scientific">Triticum</name>
        <dbReference type="NCBI Taxonomy" id="4564"/>
    </organismHost>
    <reference key="1">
        <citation type="journal article" date="1993" name="Virology" volume="195" first="16" last="32">
            <title>Complete nucleotide sequence and organization of the bipartite RNA genome of soil-borne wheat mosaic virus.</title>
            <authorList>
                <person name="Shirako Y."/>
                <person name="Wilson T.M."/>
            </authorList>
            <dbReference type="PubMed" id="8317092"/>
            <dbReference type="DOI" id="10.1006/viro.1993.1342"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [GENOMIC RNA]</scope>
    </reference>
    <reference key="2">
        <citation type="journal article" date="1998" name="J. Virol." volume="72" first="1677" last="1682">
            <title>Non-AUG translation initiation in a plant RNA virus: a forty-amino-acid extension is added to the N terminus of the soil-borne wheat mosaic virus capsid protein.</title>
            <authorList>
                <person name="Shirako Y."/>
            </authorList>
            <dbReference type="PubMed" id="9445077"/>
        </citation>
        <scope>ALTERNATIVE INITIATION</scope>
    </reference>
    <reference key="3">
        <citation type="journal article" date="2000" name="Virology" volume="277" first="66" last="75">
            <title>Construction of full-length cDNA clones to Soil-borne wheat mosaic virus RNA1 and RNA2, from which infectious RNAs are transcribed in vitro: virion formation and systemic infection without expression of the N-terminal and C-terminal extensions to the capsid protein.</title>
            <authorList>
                <person name="Yamamiya A."/>
                <person name="Shirako Y."/>
            </authorList>
            <dbReference type="PubMed" id="11062037"/>
            <dbReference type="DOI" id="10.1006/viro.2000.0587"/>
        </citation>
        <scope>FUNCTION OF ISOFORM N-CP</scope>
        <source>
            <strain>Isolate -/Japan/JT/1982</strain>
        </source>
    </reference>
    <comment type="alternative products">
        <event type="alternative initiation"/>
        <isoform>
            <id>Q06388-2</id>
            <name>N-CP</name>
            <name>24-kDa extended protein</name>
            <sequence type="described" ref="VSP_041680"/>
        </isoform>
        <isoform>
            <id>Q06388-1</id>
            <name>Capsid protein</name>
            <sequence type="displayed"/>
        </isoform>
    </comment>
    <comment type="miscellaneous">
        <text evidence="1">Translationally initiated at a CTG codon 120 nucleotides upstream of the ATG initiation codon for the CP gene.</text>
    </comment>
    <dbReference type="Proteomes" id="UP000009270">
        <property type="component" value="Genome"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <evidence type="ECO:0000305" key="1"/>
    <sequence length="216" mass="23536" checksum="96C080F604267167" modified="1996-11-01" version="1">MDKFARLKDQVDLSLQKAAGKVTAESTGPLLPKVTTPLPVMAVNKGYTGYNKELNAMAATHAYIRLSTLMSQIESWQATRASVLTHLGVMLNGVSKLGERSFFSRTKRFGAHTSDGDEIFCDLGGEAVTQILSRLTVALQSARGEGAQTRNAKRGAAPGTSQVENEEQGQTDQTLAISNAVAELMIFVRTKDFTMNECYTQDSFEAKYNLKWEGSS</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>